Multiple sequence alignment - TraesCS3B01G398500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G398500 chr3B 100.000 6965 0 0 1 6965 629291268 629284304 0.000000e+00 12863.0
1 TraesCS3B01G398500 chr3A 94.495 3415 147 29 2911 6312 616101383 616097997 0.000000e+00 5227.0
2 TraesCS3B01G398500 chr3A 94.423 2062 60 13 817 2844 616103424 616101384 0.000000e+00 3120.0
3 TraesCS3B01G398500 chr3A 91.080 426 34 3 1 425 616104779 616104357 2.180000e-159 573.0
4 TraesCS3B01G398500 chr3A 97.436 39 1 0 6422 6460 616097830 616097792 4.510000e-07 67.6
5 TraesCS3B01G398500 chr3D 94.550 2624 58 17 745 3332 473620418 473617844 0.000000e+00 3975.0
6 TraesCS3B01G398500 chr3D 95.854 2219 64 13 4207 6419 473616974 473614778 0.000000e+00 3563.0
7 TraesCS3B01G398500 chr3D 95.298 872 36 4 3351 4221 473617857 473616990 0.000000e+00 1378.0
8 TraesCS3B01G398500 chr3D 90.960 708 44 9 1 692 473621424 473620721 0.000000e+00 935.0
9 TraesCS3B01G398500 chr3D 85.556 90 12 1 6419 6507 473613679 473613590 7.440000e-15 93.5
10 TraesCS3B01G398500 chr7A 92.216 167 10 1 2383 2546 44439472 44439638 4.200000e-57 233.0
11 TraesCS3B01G398500 chr7A 85.333 75 11 0 6682 6756 311308977 311309051 2.080000e-10 78.7
12 TraesCS3B01G398500 chr6D 93.333 150 7 2 2399 2547 13287776 13287629 1.180000e-52 219.0
13 TraesCS3B01G398500 chr6D 91.729 133 11 0 2414 2546 131679736 131679868 1.190000e-42 185.0
14 TraesCS3B01G398500 chr6D 86.792 159 17 4 2394 2550 27813926 27813770 2.580000e-39 174.0
15 TraesCS3B01G398500 chr1B 91.946 149 10 2 2399 2546 256197393 256197540 2.550000e-49 207.0
16 TraesCS3B01G398500 chr1B 92.593 135 7 1 2382 2513 230030417 230030551 2.560000e-44 191.0
17 TraesCS3B01G398500 chr5D 88.554 166 17 2 2382 2546 325957472 325957636 4.260000e-47 200.0
18 TraesCS3B01G398500 chr5B 90.260 154 9 2 2399 2546 465998842 465998689 5.510000e-46 196.0
19 TraesCS3B01G398500 chr4B 80.645 155 27 2 6602 6756 398566971 398567122 4.410000e-22 117.0
20 TraesCS3B01G398500 chr2D 88.000 75 9 0 6682 6756 378360204 378360278 9.620000e-14 89.8
21 TraesCS3B01G398500 chr2D 84.337 83 11 2 6669 6749 627330387 627330469 5.790000e-11 80.5
22 TraesCS3B01G398500 chr2D 85.333 75 10 1 6682 6756 18206658 18206731 7.490000e-10 76.8
23 TraesCS3B01G398500 chr2B 86.842 76 8 2 6682 6756 142448703 142448629 4.480000e-12 84.2
24 TraesCS3B01G398500 chr1D 87.324 71 9 0 6684 6754 291789556 291789626 1.610000e-11 82.4
25 TraesCS3B01G398500 chr1A 83.908 87 13 1 6669 6754 363692834 363692920 1.610000e-11 82.4
26 TraesCS3B01G398500 chr7B 87.500 64 8 0 6693 6756 254087028 254086965 2.690000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G398500 chr3B 629284304 629291268 6964 True 12863.0 12863 100.0000 1 6965 1 chr3B.!!$R1 6964
1 TraesCS3B01G398500 chr3A 616097792 616104779 6987 True 2246.9 5227 94.3585 1 6460 4 chr3A.!!$R1 6459
2 TraesCS3B01G398500 chr3D 473613590 473621424 7834 True 1988.9 3975 92.4436 1 6507 5 chr3D.!!$R1 6506

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
412 413 0.535335 TGGAAGAAAGCTCCGCGTAT 59.465 50.000 4.92 0.00 0.00 3.06 F
737 1101 0.595053 ACTATCACGATCGCGCTTGG 60.595 55.000 16.60 4.10 42.48 3.61 F
1832 2465 0.940126 CCGCAGAGCAATCATGTACC 59.060 55.000 0.00 0.00 0.00 3.34 F
2513 3180 1.025113 TCCGAGTCGCTACCACAGAG 61.025 60.000 7.12 0.00 0.00 3.35 F
2514 3181 1.226435 CGAGTCGCTACCACAGAGC 60.226 63.158 0.00 0.00 36.54 4.09 F
3104 3773 1.260206 GTCGATGTGACTAGTGTGCG 58.740 55.000 0.00 0.00 44.58 5.34 F
4575 5305 1.149361 TGTGAAACCTGTGTCGTCGC 61.149 55.000 0.00 0.00 34.36 5.19 F
5339 6070 0.106318 AGGGAAGGCCTGAATCATGC 60.106 55.000 5.69 1.76 0.00 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1772 2405 0.942252 GAAACAGGACACCCGTCAAC 59.058 55.000 0.00 0.00 44.54 3.18 R
1853 2486 1.522900 TCCCCAATCAGGATCTTCCC 58.477 55.000 0.00 0.00 41.22 3.97 R
3292 3979 1.345741 AGGCATGACCACTCGATATGG 59.654 52.381 13.06 13.06 43.14 2.74 R
4041 4739 0.537188 ATACAGTCAGCACTTCCCCG 59.463 55.000 0.00 0.00 0.00 5.73 R
4387 5115 1.135141 GCCTATTGTTTGCGCATTCCA 60.135 47.619 12.75 5.36 0.00 3.53 R
4709 5439 0.324943 GTCTTGCACCCAGAAGGCTA 59.675 55.000 0.00 0.00 40.58 3.93 R
5920 6653 0.032813 ACATCCTGGGGCCTGAAATG 60.033 55.000 0.84 5.76 0.00 2.32 R
6805 8638 0.104120 TCCTGACATTATGACCGCCG 59.896 55.000 0.00 0.00 0.00 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.314923 GTATTTCACATTGCTGGTCATGT 57.685 39.130 0.00 0.00 0.00 3.21
107 108 3.734463 TGTTTTGTGATTAGGCACTCGA 58.266 40.909 0.00 0.00 41.75 4.04
214 215 1.672363 CACTGAGCTTGCAAGACACAA 59.328 47.619 30.39 8.86 0.00 3.33
243 244 1.903183 TGGTGGTGTTCGATGGACATA 59.097 47.619 0.00 0.00 0.00 2.29
300 301 3.801114 TCATGATAGTGGACCTTCGTG 57.199 47.619 0.00 0.00 0.00 4.35
317 318 4.188247 TCGTGAGTTATGACTGGAAAGG 57.812 45.455 0.00 0.00 35.88 3.11
335 336 6.127647 TGGAAAGGAATGCTCATGTATTTCAC 60.128 38.462 0.00 6.20 0.00 3.18
336 337 6.096001 GGAAAGGAATGCTCATGTATTTCACT 59.904 38.462 0.00 0.00 0.00 3.41
351 352 2.957402 TCACTGGAAGGCATCAACTT 57.043 45.000 0.00 0.00 39.30 2.66
356 357 3.319122 ACTGGAAGGCATCAACTTTTCAC 59.681 43.478 0.00 0.00 39.30 3.18
362 363 3.153919 GGCATCAACTTTTCACAGGGTA 58.846 45.455 0.00 0.00 0.00 3.69
378 379 3.436704 CAGGGTAGTTACTACGACGACAA 59.563 47.826 15.28 0.00 37.79 3.18
406 407 3.289407 AAGGCTATGGAAGAAAGCTCC 57.711 47.619 0.00 0.00 36.48 4.70
412 413 0.535335 TGGAAGAAAGCTCCGCGTAT 59.465 50.000 4.92 0.00 0.00 3.06
429 430 3.619929 GCGTATAAATGCGGGTAATAGGG 59.380 47.826 2.72 0.00 36.39 3.53
437 438 2.111255 TGCGGGTAATAGGGAGGAGTAT 59.889 50.000 0.00 0.00 0.00 2.12
457 458 3.046283 TGCCTCATCTATAGTGGTGGT 57.954 47.619 0.00 0.00 0.00 4.16
458 459 4.193240 TGCCTCATCTATAGTGGTGGTA 57.807 45.455 0.00 1.20 0.00 3.25
479 483 9.436957 GTGGTATGGAATTATAGGTCTTATGTG 57.563 37.037 0.00 0.00 0.00 3.21
496 513 4.462133 GGGGGCCACATGGATGCA 62.462 66.667 7.65 0.00 37.39 3.96
506 619 3.695556 CCACATGGATGCACATACAAAGA 59.304 43.478 0.00 0.00 34.87 2.52
515 628 2.680339 GCACATACAAAGAAGGGAGAGC 59.320 50.000 0.00 0.00 0.00 4.09
583 730 5.990408 AGAAGTTGAAATGCTCTTACGTTG 58.010 37.500 0.00 0.00 0.00 4.10
612 759 8.816144 TCAAGCTTTTGACAAAATTATCAACAC 58.184 29.630 13.55 0.00 34.61 3.32
641 788 9.507329 CCAATGCTTAACCAGTAAGTATCATAT 57.493 33.333 0.00 0.00 42.39 1.78
718 1082 8.523915 AATCCAAATGATGCAGTTATCACTTA 57.476 30.769 0.00 0.00 39.68 2.24
722 1086 9.060347 CCAAATGATGCAGTTATCACTTACTAT 57.940 33.333 0.00 0.00 39.68 2.12
726 1090 6.918022 TGATGCAGTTATCACTTACTATCACG 59.082 38.462 0.00 0.00 32.39 4.35
727 1091 6.445357 TGCAGTTATCACTTACTATCACGA 57.555 37.500 0.00 0.00 0.00 4.35
728 1092 7.039313 TGCAGTTATCACTTACTATCACGAT 57.961 36.000 0.00 0.00 0.00 3.73
729 1093 7.139392 TGCAGTTATCACTTACTATCACGATC 58.861 38.462 0.00 0.00 0.00 3.69
730 1094 6.303496 GCAGTTATCACTTACTATCACGATCG 59.697 42.308 14.88 14.88 0.00 3.69
731 1095 6.303496 CAGTTATCACTTACTATCACGATCGC 59.697 42.308 16.60 0.00 0.00 4.58
732 1096 3.249013 TCACTTACTATCACGATCGCG 57.751 47.619 16.60 5.75 44.79 5.87
733 1097 1.709203 CACTTACTATCACGATCGCGC 59.291 52.381 16.60 0.00 42.48 6.86
734 1098 1.602851 ACTTACTATCACGATCGCGCT 59.397 47.619 16.60 0.00 42.48 5.92
735 1099 2.033049 ACTTACTATCACGATCGCGCTT 59.967 45.455 16.60 0.04 42.48 4.68
736 1100 2.032414 TACTATCACGATCGCGCTTG 57.968 50.000 16.60 6.03 42.48 4.01
737 1101 0.595053 ACTATCACGATCGCGCTTGG 60.595 55.000 16.60 4.10 42.48 3.61
738 1102 1.278172 CTATCACGATCGCGCTTGGG 61.278 60.000 16.60 0.00 42.48 4.12
739 1103 2.693250 TATCACGATCGCGCTTGGGG 62.693 60.000 16.60 0.00 42.48 4.96
845 1466 7.695074 ACATTCCATAATTCCATCCCAATTT 57.305 32.000 0.00 0.00 0.00 1.82
1137 1768 1.690985 CAACCCCTCCTCCTCCTCC 60.691 68.421 0.00 0.00 0.00 4.30
1138 1769 1.869452 AACCCCTCCTCCTCCTCCT 60.869 63.158 0.00 0.00 0.00 3.69
1139 1770 1.892441 AACCCCTCCTCCTCCTCCTC 61.892 65.000 0.00 0.00 0.00 3.71
1203 1834 4.760047 CCCCGTCGGCTGTTCCAG 62.760 72.222 5.50 0.00 34.01 3.86
1561 2193 1.820906 GGCTGCTTCGCATGGATGA 60.821 57.895 0.00 0.00 38.13 2.92
1824 2457 2.749044 CAGGCACCGCAGAGCAAT 60.749 61.111 0.00 0.00 0.00 3.56
1831 2464 1.328680 CACCGCAGAGCAATCATGTAC 59.671 52.381 0.00 0.00 0.00 2.90
1832 2465 0.940126 CCGCAGAGCAATCATGTACC 59.060 55.000 0.00 0.00 0.00 3.34
1833 2466 1.655484 CGCAGAGCAATCATGTACCA 58.345 50.000 0.00 0.00 0.00 3.25
1853 2486 4.141733 ACCATTGAACCTTTCCCAAACAAG 60.142 41.667 0.00 0.00 0.00 3.16
1908 2545 1.840650 AGCTGGTGACTCAGGCTGT 60.841 57.895 15.27 0.00 35.43 4.40
2076 2716 2.874701 TCAGCAACTGAAAACTGAGCTC 59.125 45.455 6.82 6.82 37.57 4.09
2169 2809 3.007398 TCACACAAAAACTTGTTGCCCTT 59.993 39.130 0.00 0.00 31.86 3.95
2455 3122 3.562973 TCAACTTAGTGTCGACTCGAGTT 59.437 43.478 21.08 24.00 38.38 3.01
2513 3180 1.025113 TCCGAGTCGCTACCACAGAG 61.025 60.000 7.12 0.00 0.00 3.35
2514 3181 1.226435 CGAGTCGCTACCACAGAGC 60.226 63.158 0.00 0.00 36.54 4.09
2629 3296 5.705441 AGAACATTAAGTTTCATGCCTCGAA 59.295 36.000 0.00 0.00 41.51 3.71
2712 3379 7.859325 TTGTTAGCCCATCAAAACTATCTAC 57.141 36.000 0.00 0.00 0.00 2.59
2764 3433 9.841880 GAAAATTTTACCATGAAGAGTTCCTAC 57.158 33.333 2.75 0.00 0.00 3.18
2815 3484 9.599866 CTTTATAATAAGTGATGCATATCGGGA 57.400 33.333 0.00 0.00 36.04 5.14
2845 3514 5.106555 CCGACATGCTTTTATTCAGTTGAGT 60.107 40.000 0.00 0.00 0.00 3.41
2846 3515 5.791974 CGACATGCTTTTATTCAGTTGAGTG 59.208 40.000 0.00 0.00 0.00 3.51
2890 3559 6.030082 AGATTAAGGGACTGAAGGGAAGTTA 58.970 40.000 0.00 0.00 40.86 2.24
2922 3591 8.262601 TGGGTATCAATAGACATACATGTTCT 57.737 34.615 2.30 3.41 41.95 3.01
3104 3773 1.260206 GTCGATGTGACTAGTGTGCG 58.740 55.000 0.00 0.00 44.58 5.34
3210 3879 8.388484 AGAATCTGGACTAATGTGCATTATTC 57.612 34.615 11.48 11.48 43.39 1.75
3292 3979 5.863935 GGAAACCTGAACTTGTGATTTATGC 59.136 40.000 0.00 0.00 0.00 3.14
3318 4005 1.877680 CGAGTGGTCATGCCTTTGTCA 60.878 52.381 7.54 0.00 38.35 3.58
3319 4006 2.229792 GAGTGGTCATGCCTTTGTCAA 58.770 47.619 7.54 0.00 38.35 3.18
3320 4007 2.821969 GAGTGGTCATGCCTTTGTCAAT 59.178 45.455 7.54 0.00 38.35 2.57
3321 4008 2.559668 AGTGGTCATGCCTTTGTCAATG 59.440 45.455 7.54 0.00 38.35 2.82
3322 4009 2.297033 GTGGTCATGCCTTTGTCAATGT 59.703 45.455 7.54 0.00 38.35 2.71
3323 4010 3.505680 GTGGTCATGCCTTTGTCAATGTA 59.494 43.478 7.54 0.00 38.35 2.29
3324 4011 4.022416 GTGGTCATGCCTTTGTCAATGTAA 60.022 41.667 7.54 0.00 38.35 2.41
3325 4012 4.586421 TGGTCATGCCTTTGTCAATGTAAA 59.414 37.500 7.54 0.00 38.35 2.01
3326 4013 5.069648 TGGTCATGCCTTTGTCAATGTAAAA 59.930 36.000 7.54 0.00 38.35 1.52
3327 4014 5.988561 GGTCATGCCTTTGTCAATGTAAAAA 59.011 36.000 0.00 0.00 0.00 1.94
3328 4015 6.650390 GGTCATGCCTTTGTCAATGTAAAAAT 59.350 34.615 0.00 0.00 0.00 1.82
3329 4016 7.816995 GGTCATGCCTTTGTCAATGTAAAAATA 59.183 33.333 0.00 0.00 0.00 1.40
3330 4017 8.863049 GTCATGCCTTTGTCAATGTAAAAATAG 58.137 33.333 0.00 0.00 0.00 1.73
3331 4018 8.584157 TCATGCCTTTGTCAATGTAAAAATAGT 58.416 29.630 0.00 0.00 0.00 2.12
3332 4019 9.206870 CATGCCTTTGTCAATGTAAAAATAGTT 57.793 29.630 0.00 0.00 0.00 2.24
3333 4020 9.777297 ATGCCTTTGTCAATGTAAAAATAGTTT 57.223 25.926 0.00 0.00 0.00 2.66
3334 4021 9.606631 TGCCTTTGTCAATGTAAAAATAGTTTT 57.393 25.926 6.13 6.13 40.15 2.43
3391 4078 4.742138 GCCTTTCAAAGTGTATTTTGGCCA 60.742 41.667 0.00 0.00 38.33 5.36
3400 4087 6.616774 AGTGTATTTTGGCCAAAACATTTG 57.383 33.333 38.97 0.00 42.32 2.32
3578 4274 4.824537 ACGCAGATCAGACATATAGACTGT 59.175 41.667 0.00 0.00 40.29 3.55
3611 4307 4.620567 CGATATGGCTGATATTTGACCCGA 60.621 45.833 0.00 0.00 0.00 5.14
4041 4739 1.781786 TGCTGTGAGATAGAGGACCC 58.218 55.000 0.00 0.00 0.00 4.46
4061 4759 1.740380 CGGGGAAGTGCTGACTGTATG 60.740 57.143 0.00 0.00 30.61 2.39
4086 4784 4.864704 ATTTAATGTTTGGCGAAGTGGT 57.135 36.364 0.00 0.00 0.00 4.16
4094 4792 3.342377 TTGGCGAAGTGGTGATGATAA 57.658 42.857 0.00 0.00 0.00 1.75
4101 4799 5.410746 GCGAAGTGGTGATGATAATCATGAT 59.589 40.000 1.18 1.18 37.20 2.45
4111 4809 8.304596 GTGATGATAATCATGATTTTCCTGCAT 58.695 33.333 25.26 15.80 37.20 3.96
4296 5024 6.045955 GCAACTTGTGTTCCATTTTCCTTAA 58.954 36.000 0.00 0.00 33.52 1.85
4297 5025 6.705825 GCAACTTGTGTTCCATTTTCCTTAAT 59.294 34.615 0.00 0.00 33.52 1.40
4387 5115 8.375506 TCAGTTATTTGTTCCTGTATCAAGTCT 58.624 33.333 0.00 0.00 0.00 3.24
4478 5206 3.985279 TCACTGGATTTTGTTCGTAGTCG 59.015 43.478 0.00 0.00 38.55 4.18
4573 5303 1.217882 CCTGTGAAACCTGTGTCGTC 58.782 55.000 0.00 0.00 34.36 4.20
4575 5305 1.149361 TGTGAAACCTGTGTCGTCGC 61.149 55.000 0.00 0.00 34.36 5.19
4638 5368 7.592885 ATCTGCTTGGCAAATTTGTATCTAT 57.407 32.000 19.03 1.80 38.41 1.98
4699 5429 2.421073 GGCCGGTTTAACATGAGTTACC 59.579 50.000 1.90 0.67 39.80 2.85
4709 5439 4.307032 ACATGAGTTACCCTTGCAGAAT 57.693 40.909 0.00 0.00 0.00 2.40
4816 5546 2.424234 GGGCTGTTATCTATTTGGGCCA 60.424 50.000 0.00 0.00 40.00 5.36
4840 5570 2.956333 GGGTGTTACACAAAGCCTCTTT 59.044 45.455 17.67 0.00 35.86 2.52
4970 5701 6.822676 TCCATTTTGTTTGTGCTTTCTGAAAT 59.177 30.769 2.88 0.00 0.00 2.17
5035 5766 8.746052 TTCATCTTTCAGAAAAGGAAGTACAA 57.254 30.769 0.00 0.00 41.88 2.41
5159 5890 4.099419 ACGCAAAGGAAAAAGATTGGAGTT 59.901 37.500 0.00 0.00 0.00 3.01
5210 5941 1.761174 GACTGGGCCACCTTCAGAA 59.239 57.895 0.00 0.00 37.76 3.02
5339 6070 0.106318 AGGGAAGGCCTGAATCATGC 60.106 55.000 5.69 1.76 0.00 4.06
5345 6076 2.463752 AGGCCTGAATCATGCAATTGT 58.536 42.857 3.11 0.00 0.00 2.71
5649 6380 2.024414 GAGTTTCAAACCAGTGCAGGT 58.976 47.619 0.00 0.00 45.91 4.00
5741 6472 1.829222 TCCAATTCGTCCCAGAGGTAC 59.171 52.381 0.00 0.00 0.00 3.34
5755 6486 1.067212 GAGGTACGGCTCTACACATGG 59.933 57.143 0.00 0.00 0.00 3.66
5799 6530 6.128172 GCAGGTGTAGTGCATATATGGAAATC 60.128 42.308 14.51 5.98 40.86 2.17
5800 6531 6.372659 CAGGTGTAGTGCATATATGGAAATCC 59.627 42.308 14.51 9.95 0.00 3.01
5843 6574 0.522076 GCGCTGATGTTAGCTGCAAC 60.522 55.000 0.00 5.27 41.51 4.17
5882 6615 1.662309 CGTCGAACGTCAAGCACTAGT 60.662 52.381 0.00 0.00 36.74 2.57
5965 6698 6.488006 CCAAGAGGTGAAGAAGATTTTCTGAA 59.512 38.462 0.00 0.00 42.80 3.02
6020 6753 1.734117 GCGCCTGTTTTGATGTGCC 60.734 57.895 0.00 0.00 0.00 5.01
6083 6816 2.158943 GCTTAGACCTAGCCATCCGTTT 60.159 50.000 0.00 0.00 0.00 3.60
6249 6982 6.954352 ACAGATCTTAAAGACTAAAGGGGT 57.046 37.500 0.00 0.00 0.00 4.95
6270 7003 6.239458 GGGGTTAGAAAACAAATGGTCATTGA 60.239 38.462 0.00 0.00 37.34 2.57
6284 7017 6.633500 TGGTCATTGATTTCGTTTCTTTCT 57.367 33.333 0.00 0.00 0.00 2.52
6288 7021 7.324616 GGTCATTGATTTCGTTTCTTTCTTGAG 59.675 37.037 0.00 0.00 0.00 3.02
6289 7022 7.857885 GTCATTGATTTCGTTTCTTTCTTGAGT 59.142 33.333 0.00 0.00 0.00 3.41
6290 7023 7.857389 TCATTGATTTCGTTTCTTTCTTGAGTG 59.143 33.333 0.00 0.00 0.00 3.51
6291 7024 6.677781 TGATTTCGTTTCTTTCTTGAGTGT 57.322 33.333 0.00 0.00 0.00 3.55
6293 7026 6.966632 TGATTTCGTTTCTTTCTTGAGTGTTG 59.033 34.615 0.00 0.00 0.00 3.33
6312 7045 1.971357 TGGAGACTTGAGAGGGTCAAC 59.029 52.381 0.00 0.00 40.45 3.18
6313 7046 1.067495 GGAGACTTGAGAGGGTCAACG 60.067 57.143 0.00 0.00 40.45 4.10
6314 7047 1.614413 GAGACTTGAGAGGGTCAACGT 59.386 52.381 0.00 0.00 40.45 3.99
6315 7048 1.341531 AGACTTGAGAGGGTCAACGTG 59.658 52.381 0.00 0.00 40.45 4.49
6316 7049 1.340248 GACTTGAGAGGGTCAACGTGA 59.660 52.381 0.00 0.00 40.45 4.35
6317 7050 1.341531 ACTTGAGAGGGTCAACGTGAG 59.658 52.381 0.00 0.00 40.45 3.51
6318 7051 0.679505 TTGAGAGGGTCAACGTGAGG 59.320 55.000 0.00 0.00 40.45 3.86
6319 7052 0.469331 TGAGAGGGTCAACGTGAGGT 60.469 55.000 0.00 0.00 29.64 3.85
6349 7082 2.351706 AAACCCGTTTGGCACTCTTA 57.648 45.000 0.00 0.00 37.83 2.10
6350 7083 1.601166 AACCCGTTTGGCACTCTTAC 58.399 50.000 0.00 0.00 37.83 2.34
6353 7086 1.156736 CCGTTTGGCACTCTTACCTG 58.843 55.000 0.00 0.00 0.00 4.00
6355 7088 0.881796 GTTTGGCACTCTTACCTGGC 59.118 55.000 0.00 0.00 0.00 4.85
6356 7089 0.476338 TTTGGCACTCTTACCTGGCA 59.524 50.000 0.00 0.00 40.90 4.92
6360 7093 1.545651 GGCACTCTTACCTGGCAAAGT 60.546 52.381 8.69 0.00 33.24 2.66
6385 7119 5.606348 TTGGCAACTGTGTTTTTATTCCT 57.394 34.783 0.00 0.00 37.61 3.36
6386 7120 4.942852 TGGCAACTGTGTTTTTATTCCTG 58.057 39.130 0.00 0.00 37.61 3.86
6390 7124 5.687285 GCAACTGTGTTTTTATTCCTGAGTG 59.313 40.000 0.00 0.00 0.00 3.51
6400 8119 6.681729 TTTATTCCTGAGTGTGGTAAGAGT 57.318 37.500 0.00 0.00 0.00 3.24
6424 8256 5.432645 TGTTTCTGGTGTTGTCAAGTATGA 58.567 37.500 0.00 0.00 0.00 2.15
6461 8293 1.065854 CCACCCTCTGCTGGTTTAGAG 60.066 57.143 0.00 0.00 40.05 2.43
6462 8294 1.625818 CACCCTCTGCTGGTTTAGAGT 59.374 52.381 0.00 0.00 38.98 3.24
6467 8299 3.555168 CCTCTGCTGGTTTAGAGTTTCGT 60.555 47.826 0.00 0.00 38.98 3.85
6475 8307 6.346678 GCTGGTTTAGAGTTTCGTTCTACTTG 60.347 42.308 0.00 0.00 0.00 3.16
6476 8308 6.808829 TGGTTTAGAGTTTCGTTCTACTTGA 58.191 36.000 0.00 0.00 0.00 3.02
6477 8309 6.921857 TGGTTTAGAGTTTCGTTCTACTTGAG 59.078 38.462 0.00 0.00 0.00 3.02
6479 8311 7.650903 GGTTTAGAGTTTCGTTCTACTTGAGAA 59.349 37.037 0.00 0.00 42.13 2.87
6487 8320 5.717119 TCGTTCTACTTGAGAATACCAACC 58.283 41.667 0.00 0.00 45.96 3.77
6489 8322 5.620654 CGTTCTACTTGAGAATACCAACCGA 60.621 44.000 0.00 0.00 45.96 4.69
6496 8329 5.733620 TGAGAATACCAACCGAAGTTACT 57.266 39.130 0.00 0.00 33.27 2.24
6512 8345 5.741962 AGTTACTCTTCACCTAAACCCTC 57.258 43.478 0.00 0.00 0.00 4.30
6513 8346 4.531339 AGTTACTCTTCACCTAAACCCTCC 59.469 45.833 0.00 0.00 0.00 4.30
6514 8347 2.267192 ACTCTTCACCTAAACCCTCCC 58.733 52.381 0.00 0.00 0.00 4.30
6515 8348 2.157989 ACTCTTCACCTAAACCCTCCCT 60.158 50.000 0.00 0.00 0.00 4.20
6516 8349 2.502130 CTCTTCACCTAAACCCTCCCTC 59.498 54.545 0.00 0.00 0.00 4.30
6517 8350 1.560146 CTTCACCTAAACCCTCCCTCC 59.440 57.143 0.00 0.00 0.00 4.30
6518 8351 0.253020 TCACCTAAACCCTCCCTCCC 60.253 60.000 0.00 0.00 0.00 4.30
6519 8352 1.306739 ACCTAAACCCTCCCTCCCG 60.307 63.158 0.00 0.00 0.00 5.14
6520 8353 1.306739 CCTAAACCCTCCCTCCCGT 60.307 63.158 0.00 0.00 0.00 5.28
6521 8354 0.031817 CCTAAACCCTCCCTCCCGTA 60.032 60.000 0.00 0.00 0.00 4.02
6522 8355 1.623279 CCTAAACCCTCCCTCCCGTAA 60.623 57.143 0.00 0.00 0.00 3.18
6523 8356 2.190538 CTAAACCCTCCCTCCCGTAAA 58.809 52.381 0.00 0.00 0.00 2.01
6524 8357 1.448185 AAACCCTCCCTCCCGTAAAA 58.552 50.000 0.00 0.00 0.00 1.52
6525 8358 0.694771 AACCCTCCCTCCCGTAAAAC 59.305 55.000 0.00 0.00 0.00 2.43
6526 8359 0.178882 ACCCTCCCTCCCGTAAAACT 60.179 55.000 0.00 0.00 0.00 2.66
6527 8360 0.540454 CCCTCCCTCCCGTAAAACTC 59.460 60.000 0.00 0.00 0.00 3.01
6528 8361 1.272807 CCTCCCTCCCGTAAAACTCA 58.727 55.000 0.00 0.00 0.00 3.41
6529 8362 1.626825 CCTCCCTCCCGTAAAACTCAA 59.373 52.381 0.00 0.00 0.00 3.02
6530 8363 2.039348 CCTCCCTCCCGTAAAACTCAAA 59.961 50.000 0.00 0.00 0.00 2.69
6531 8364 3.308188 CCTCCCTCCCGTAAAACTCAAAT 60.308 47.826 0.00 0.00 0.00 2.32
6532 8365 3.681593 TCCCTCCCGTAAAACTCAAATG 58.318 45.455 0.00 0.00 0.00 2.32
6533 8366 2.752903 CCCTCCCGTAAAACTCAAATGG 59.247 50.000 0.00 0.00 0.00 3.16
6534 8367 3.418047 CCTCCCGTAAAACTCAAATGGT 58.582 45.455 0.00 0.00 0.00 3.55
6535 8368 3.439129 CCTCCCGTAAAACTCAAATGGTC 59.561 47.826 0.00 0.00 0.00 4.02
6536 8369 4.069304 CTCCCGTAAAACTCAAATGGTCA 58.931 43.478 0.00 0.00 0.00 4.02
6537 8370 4.658063 TCCCGTAAAACTCAAATGGTCAT 58.342 39.130 0.00 0.00 0.00 3.06
6538 8371 5.806818 TCCCGTAAAACTCAAATGGTCATA 58.193 37.500 0.00 0.00 0.00 2.15
6539 8372 5.644636 TCCCGTAAAACTCAAATGGTCATAC 59.355 40.000 0.00 0.00 0.00 2.39
6540 8373 5.413213 CCCGTAAAACTCAAATGGTCATACA 59.587 40.000 0.00 0.00 0.00 2.29
6541 8374 6.072397 CCCGTAAAACTCAAATGGTCATACAA 60.072 38.462 0.00 0.00 0.00 2.41
6542 8375 7.021196 CCGTAAAACTCAAATGGTCATACAAG 58.979 38.462 0.00 0.00 0.00 3.16
6543 8376 7.094975 CCGTAAAACTCAAATGGTCATACAAGA 60.095 37.037 0.00 0.00 0.00 3.02
6544 8377 8.286800 CGTAAAACTCAAATGGTCATACAAGAA 58.713 33.333 0.00 0.00 0.00 2.52
6550 8383 9.520515 ACTCAAATGGTCATACAAGAATTTACT 57.479 29.630 0.00 0.00 0.00 2.24
6574 8407 8.730680 ACTAATGAAATGCTAAAATTCTGACGT 58.269 29.630 0.00 0.00 0.00 4.34
6575 8408 9.559958 CTAATGAAATGCTAAAATTCTGACGTT 57.440 29.630 0.00 0.00 0.00 3.99
6577 8410 9.559958 AATGAAATGCTAAAATTCTGACGTTAG 57.440 29.630 0.00 0.00 0.00 2.34
6578 8411 8.317891 TGAAATGCTAAAATTCTGACGTTAGA 57.682 30.769 5.85 5.85 0.00 2.10
6579 8412 8.946085 TGAAATGCTAAAATTCTGACGTTAGAT 58.054 29.630 11.19 0.00 0.00 1.98
6580 8413 9.774742 GAAATGCTAAAATTCTGACGTTAGATT 57.225 29.630 11.19 4.89 0.00 2.40
6587 8420 8.965986 AAAATTCTGACGTTAGATTTTTAGCC 57.034 30.769 27.53 0.00 37.95 3.93
6588 8421 7.681939 AATTCTGACGTTAGATTTTTAGCCA 57.318 32.000 11.19 0.00 0.00 4.75
6589 8422 7.865706 ATTCTGACGTTAGATTTTTAGCCAT 57.134 32.000 11.19 0.00 0.00 4.40
6590 8423 6.662414 TCTGACGTTAGATTTTTAGCCATG 57.338 37.500 5.85 0.00 0.00 3.66
6591 8424 6.403049 TCTGACGTTAGATTTTTAGCCATGA 58.597 36.000 5.85 0.00 0.00 3.07
6592 8425 6.312918 TCTGACGTTAGATTTTTAGCCATGAC 59.687 38.462 5.85 0.00 0.00 3.06
6593 8426 5.935206 TGACGTTAGATTTTTAGCCATGACA 59.065 36.000 0.00 0.00 0.00 3.58
6594 8427 6.428465 TGACGTTAGATTTTTAGCCATGACAA 59.572 34.615 0.00 0.00 0.00 3.18
6595 8428 7.041030 TGACGTTAGATTTTTAGCCATGACAAA 60.041 33.333 0.00 0.00 0.00 2.83
6596 8429 7.826690 ACGTTAGATTTTTAGCCATGACAAAT 58.173 30.769 0.00 0.00 0.00 2.32
6597 8430 8.303876 ACGTTAGATTTTTAGCCATGACAAATT 58.696 29.630 0.00 0.00 0.00 1.82
6598 8431 9.781834 CGTTAGATTTTTAGCCATGACAAATTA 57.218 29.630 0.00 0.00 0.00 1.40
6604 8437 9.651913 ATTTTTAGCCATGACAAATTAAATCGT 57.348 25.926 0.00 0.00 0.00 3.73
6605 8438 8.459521 TTTTAGCCATGACAAATTAAATCGTG 57.540 30.769 0.00 0.00 0.00 4.35
6608 8441 4.742417 CCATGACAAATTAAATCGTGGCA 58.258 39.130 10.31 0.00 41.41 4.92
6609 8442 5.167121 CCATGACAAATTAAATCGTGGCAA 58.833 37.500 10.31 0.00 41.41 4.52
6610 8443 5.811613 CCATGACAAATTAAATCGTGGCAAT 59.188 36.000 10.31 0.00 41.41 3.56
6611 8444 6.313411 CCATGACAAATTAAATCGTGGCAATT 59.687 34.615 10.31 0.00 41.41 2.32
6612 8445 7.148440 CCATGACAAATTAAATCGTGGCAATTT 60.148 33.333 10.31 2.96 41.41 1.82
6613 8446 8.867935 CATGACAAATTAAATCGTGGCAATTTA 58.132 29.630 0.00 0.00 31.47 1.40
6614 8447 8.994429 TGACAAATTAAATCGTGGCAATTTAT 57.006 26.923 5.46 0.00 31.26 1.40
6615 8448 8.867935 TGACAAATTAAATCGTGGCAATTTATG 58.132 29.630 5.46 4.51 31.26 1.90
6616 8449 8.770438 ACAAATTAAATCGTGGCAATTTATGT 57.230 26.923 5.46 5.00 31.26 2.29
6617 8450 9.213799 ACAAATTAAATCGTGGCAATTTATGTT 57.786 25.926 5.46 2.71 31.26 2.71
6618 8451 9.475505 CAAATTAAATCGTGGCAATTTATGTTG 57.524 29.630 5.46 8.39 31.26 3.33
6619 8452 7.769272 ATTAAATCGTGGCAATTTATGTTGG 57.231 32.000 5.46 0.00 30.79 3.77
6626 8459 4.058721 GGCAATTTATGTTGGCCTTAGG 57.941 45.455 3.32 0.00 45.74 2.69
6627 8460 3.704061 GGCAATTTATGTTGGCCTTAGGA 59.296 43.478 3.32 0.00 45.74 2.94
6628 8461 4.344968 GGCAATTTATGTTGGCCTTAGGAT 59.655 41.667 3.32 0.00 45.74 3.24
6629 8462 5.291971 GCAATTTATGTTGGCCTTAGGATG 58.708 41.667 3.32 0.00 0.00 3.51
6630 8463 5.739935 GCAATTTATGTTGGCCTTAGGATGG 60.740 44.000 3.32 0.00 0.00 3.51
6646 8479 8.912988 CCTTAGGATGGCAAATTTAATTAGTGA 58.087 33.333 0.00 0.00 0.00 3.41
6647 8480 9.956720 CTTAGGATGGCAAATTTAATTAGTGAG 57.043 33.333 0.00 0.00 0.00 3.51
6648 8481 6.809869 AGGATGGCAAATTTAATTAGTGAGC 58.190 36.000 0.00 0.00 0.00 4.26
6649 8482 6.380846 AGGATGGCAAATTTAATTAGTGAGCA 59.619 34.615 0.00 0.00 0.00 4.26
6650 8483 6.476706 GGATGGCAAATTTAATTAGTGAGCAC 59.523 38.462 0.00 0.00 0.00 4.40
6651 8484 6.338214 TGGCAAATTTAATTAGTGAGCACA 57.662 33.333 3.19 0.00 0.00 4.57
6652 8485 6.753180 TGGCAAATTTAATTAGTGAGCACAA 58.247 32.000 3.19 0.00 0.00 3.33
6653 8486 6.644592 TGGCAAATTTAATTAGTGAGCACAAC 59.355 34.615 3.19 0.00 0.00 3.32
6654 8487 6.644592 GGCAAATTTAATTAGTGAGCACAACA 59.355 34.615 3.19 0.00 0.00 3.33
6655 8488 7.170658 GGCAAATTTAATTAGTGAGCACAACAA 59.829 33.333 3.19 0.00 0.00 2.83
6656 8489 8.711457 GCAAATTTAATTAGTGAGCACAACAAT 58.289 29.630 3.19 0.00 0.00 2.71
6662 8495 7.935338 AATTAGTGAGCACAACAATTTCTTG 57.065 32.000 3.19 0.00 38.39 3.02
6663 8496 4.311816 AGTGAGCACAACAATTTCTTGG 57.688 40.909 3.19 0.00 36.64 3.61
6664 8497 2.796593 GTGAGCACAACAATTTCTTGGC 59.203 45.455 0.00 0.00 36.64 4.52
6665 8498 2.694628 TGAGCACAACAATTTCTTGGCT 59.305 40.909 0.00 0.00 36.64 4.75
6666 8499 3.132646 TGAGCACAACAATTTCTTGGCTT 59.867 39.130 0.00 0.00 36.64 4.35
6667 8500 3.460103 AGCACAACAATTTCTTGGCTTG 58.540 40.909 0.00 0.00 36.64 4.01
6668 8501 3.118665 AGCACAACAATTTCTTGGCTTGT 60.119 39.130 0.00 0.00 33.97 3.16
6669 8502 3.622612 GCACAACAATTTCTTGGCTTGTT 59.377 39.130 0.00 0.00 42.24 2.83
6670 8503 4.094739 GCACAACAATTTCTTGGCTTGTTT 59.905 37.500 0.00 0.00 40.19 2.83
6671 8504 5.727515 GCACAACAATTTCTTGGCTTGTTTC 60.728 40.000 0.00 0.00 40.19 2.78
6672 8505 4.875536 ACAACAATTTCTTGGCTTGTTTCC 59.124 37.500 0.00 0.00 40.19 3.13
6673 8506 5.118286 CAACAATTTCTTGGCTTGTTTCCT 58.882 37.500 0.00 0.00 40.19 3.36
6674 8507 4.696455 ACAATTTCTTGGCTTGTTTCCTG 58.304 39.130 0.00 0.00 36.64 3.86
6675 8508 2.888834 TTTCTTGGCTTGTTTCCTGC 57.111 45.000 0.00 0.00 0.00 4.85
6676 8509 2.071778 TTCTTGGCTTGTTTCCTGCT 57.928 45.000 0.00 0.00 0.00 4.24
6677 8510 2.071778 TCTTGGCTTGTTTCCTGCTT 57.928 45.000 0.00 0.00 0.00 3.91
6678 8511 1.682854 TCTTGGCTTGTTTCCTGCTTG 59.317 47.619 0.00 0.00 0.00 4.01
6679 8512 1.410153 CTTGGCTTGTTTCCTGCTTGT 59.590 47.619 0.00 0.00 0.00 3.16
6680 8513 1.484038 TGGCTTGTTTCCTGCTTGTT 58.516 45.000 0.00 0.00 0.00 2.83
6681 8514 2.660572 TGGCTTGTTTCCTGCTTGTTA 58.339 42.857 0.00 0.00 0.00 2.41
6682 8515 3.027412 TGGCTTGTTTCCTGCTTGTTAA 58.973 40.909 0.00 0.00 0.00 2.01
6683 8516 3.181480 TGGCTTGTTTCCTGCTTGTTAAC 60.181 43.478 0.00 0.00 0.00 2.01
6684 8517 3.068165 GGCTTGTTTCCTGCTTGTTAACT 59.932 43.478 7.22 0.00 0.00 2.24
6685 8518 4.277423 GGCTTGTTTCCTGCTTGTTAACTA 59.723 41.667 7.22 0.00 0.00 2.24
6686 8519 5.221165 GGCTTGTTTCCTGCTTGTTAACTAA 60.221 40.000 7.22 0.00 0.00 2.24
6687 8520 6.447162 GCTTGTTTCCTGCTTGTTAACTAAT 58.553 36.000 7.22 0.00 0.00 1.73
6688 8521 7.308951 GGCTTGTTTCCTGCTTGTTAACTAATA 60.309 37.037 7.22 0.00 0.00 0.98
6689 8522 8.244113 GCTTGTTTCCTGCTTGTTAACTAATAT 58.756 33.333 7.22 0.00 0.00 1.28
6691 8524 9.906660 TTGTTTCCTGCTTGTTAACTAATATTG 57.093 29.630 7.22 0.00 0.00 1.90
6692 8525 8.026607 TGTTTCCTGCTTGTTAACTAATATTGC 58.973 33.333 7.22 0.00 0.00 3.56
6693 8526 6.693315 TCCTGCTTGTTAACTAATATTGCC 57.307 37.500 7.22 0.00 0.00 4.52
6694 8527 6.184068 TCCTGCTTGTTAACTAATATTGCCA 58.816 36.000 7.22 0.00 0.00 4.92
6695 8528 6.094881 TCCTGCTTGTTAACTAATATTGCCAC 59.905 38.462 7.22 0.00 0.00 5.01
6696 8529 6.202516 TGCTTGTTAACTAATATTGCCACC 57.797 37.500 7.22 0.00 0.00 4.61
6697 8530 5.126384 TGCTTGTTAACTAATATTGCCACCC 59.874 40.000 7.22 0.00 0.00 4.61
6698 8531 5.359860 GCTTGTTAACTAATATTGCCACCCT 59.640 40.000 7.22 0.00 0.00 4.34
6699 8532 6.459710 GCTTGTTAACTAATATTGCCACCCTC 60.460 42.308 7.22 0.00 0.00 4.30
6700 8533 5.120399 TGTTAACTAATATTGCCACCCTCG 58.880 41.667 7.22 0.00 0.00 4.63
6701 8534 2.930826 ACTAATATTGCCACCCTCGG 57.069 50.000 0.00 0.00 0.00 4.63
6710 8543 3.257935 CCACCCTCGGCAAACATAA 57.742 52.632 0.00 0.00 0.00 1.90
6711 8544 1.762708 CCACCCTCGGCAAACATAAT 58.237 50.000 0.00 0.00 0.00 1.28
6712 8545 2.099405 CCACCCTCGGCAAACATAATT 58.901 47.619 0.00 0.00 0.00 1.40
6713 8546 2.495669 CCACCCTCGGCAAACATAATTT 59.504 45.455 0.00 0.00 0.00 1.82
6714 8547 3.510719 CACCCTCGGCAAACATAATTTG 58.489 45.455 0.00 0.00 0.00 2.32
6725 8558 7.551455 GCAAACATAATTTGCCATGAAAAAC 57.449 32.000 12.31 0.00 46.51 2.43
6726 8559 7.137426 GCAAACATAATTTGCCATGAAAAACA 58.863 30.769 12.31 0.00 46.51 2.83
6727 8560 7.808856 GCAAACATAATTTGCCATGAAAAACAT 59.191 29.630 12.31 0.00 46.51 2.71
6728 8561 9.332301 CAAACATAATTTGCCATGAAAAACATC 57.668 29.630 0.00 0.00 37.07 3.06
6729 8562 7.614124 ACATAATTTGCCATGAAAAACATCC 57.386 32.000 0.00 0.00 37.07 3.51
6730 8563 7.166851 ACATAATTTGCCATGAAAAACATCCA 58.833 30.769 0.00 0.00 37.07 3.41
6731 8564 7.664731 ACATAATTTGCCATGAAAAACATCCAA 59.335 29.630 0.00 0.00 37.07 3.53
6732 8565 8.679100 CATAATTTGCCATGAAAAACATCCAAT 58.321 29.630 0.00 0.00 37.07 3.16
6733 8566 7.527568 AATTTGCCATGAAAAACATCCAATT 57.472 28.000 0.00 0.00 37.07 2.32
6734 8567 6.956202 TTTGCCATGAAAAACATCCAATTT 57.044 29.167 0.00 0.00 37.07 1.82
6735 8568 8.632906 ATTTGCCATGAAAAACATCCAATTTA 57.367 26.923 0.00 0.00 37.07 1.40
6736 8569 7.432350 TTGCCATGAAAAACATCCAATTTAC 57.568 32.000 0.00 0.00 37.07 2.01
6737 8570 5.936956 TGCCATGAAAAACATCCAATTTACC 59.063 36.000 0.00 0.00 37.07 2.85
6738 8571 5.936956 GCCATGAAAAACATCCAATTTACCA 59.063 36.000 0.00 0.00 37.07 3.25
6739 8572 6.598850 GCCATGAAAAACATCCAATTTACCAT 59.401 34.615 0.00 0.00 37.07 3.55
6740 8573 7.414319 GCCATGAAAAACATCCAATTTACCATG 60.414 37.037 0.00 0.00 37.07 3.66
6741 8574 7.066043 CCATGAAAAACATCCAATTTACCATGG 59.934 37.037 11.19 11.19 40.00 3.66
6742 8575 5.936956 TGAAAAACATCCAATTTACCATGGC 59.063 36.000 13.04 0.00 36.62 4.40
6743 8576 5.760484 AAAACATCCAATTTACCATGGCT 57.240 34.783 13.04 1.45 36.62 4.75
6744 8577 6.865834 AAAACATCCAATTTACCATGGCTA 57.134 33.333 13.04 0.35 36.62 3.93
6745 8578 6.865834 AAACATCCAATTTACCATGGCTAA 57.134 33.333 13.04 6.62 36.62 3.09
6746 8579 6.865834 AACATCCAATTTACCATGGCTAAA 57.134 33.333 13.04 15.46 36.62 1.85
6747 8580 6.865834 ACATCCAATTTACCATGGCTAAAA 57.134 33.333 13.04 10.71 36.62 1.52
6748 8581 7.251321 ACATCCAATTTACCATGGCTAAAAA 57.749 32.000 13.04 8.09 36.62 1.94
6749 8582 7.102993 ACATCCAATTTACCATGGCTAAAAAC 58.897 34.615 13.04 0.00 36.62 2.43
6750 8583 6.043854 TCCAATTTACCATGGCTAAAAACC 57.956 37.500 13.04 0.00 36.62 3.27
6751 8584 5.782845 TCCAATTTACCATGGCTAAAAACCT 59.217 36.000 13.04 0.00 36.62 3.50
6752 8585 5.874261 CCAATTTACCATGGCTAAAAACCTG 59.126 40.000 13.04 11.19 0.00 4.00
6753 8586 6.295575 CCAATTTACCATGGCTAAAAACCTGA 60.296 38.462 13.04 0.00 0.00 3.86
6754 8587 5.715434 TTTACCATGGCTAAAAACCTGAC 57.285 39.130 13.04 0.00 0.00 3.51
6755 8588 2.159382 ACCATGGCTAAAAACCTGACG 58.841 47.619 13.04 0.00 0.00 4.35
6756 8589 2.224670 ACCATGGCTAAAAACCTGACGA 60.225 45.455 13.04 0.00 0.00 4.20
6757 8590 2.161609 CCATGGCTAAAAACCTGACGAC 59.838 50.000 0.00 0.00 0.00 4.34
6758 8591 2.922740 TGGCTAAAAACCTGACGACT 57.077 45.000 0.00 0.00 0.00 4.18
6759 8592 3.202829 TGGCTAAAAACCTGACGACTT 57.797 42.857 0.00 0.00 0.00 3.01
6760 8593 3.547746 TGGCTAAAAACCTGACGACTTT 58.452 40.909 0.00 0.00 0.00 2.66
6761 8594 3.562557 TGGCTAAAAACCTGACGACTTTC 59.437 43.478 0.00 0.00 0.00 2.62
6762 8595 3.058432 GGCTAAAAACCTGACGACTTTCC 60.058 47.826 0.00 0.00 0.00 3.13
6763 8596 3.813724 GCTAAAAACCTGACGACTTTCCT 59.186 43.478 0.00 0.00 0.00 3.36
6764 8597 4.319549 GCTAAAAACCTGACGACTTTCCTG 60.320 45.833 0.00 0.00 0.00 3.86
6765 8598 3.277142 AAAACCTGACGACTTTCCTGT 57.723 42.857 0.00 0.00 0.00 4.00
6766 8599 3.277142 AAACCTGACGACTTTCCTGTT 57.723 42.857 0.00 0.00 0.00 3.16
6767 8600 2.528041 ACCTGACGACTTTCCTGTTC 57.472 50.000 0.00 0.00 0.00 3.18
6768 8601 1.070289 ACCTGACGACTTTCCTGTTCC 59.930 52.381 0.00 0.00 0.00 3.62
6769 8602 1.070134 CCTGACGACTTTCCTGTTCCA 59.930 52.381 0.00 0.00 0.00 3.53
6770 8603 2.289694 CCTGACGACTTTCCTGTTCCAT 60.290 50.000 0.00 0.00 0.00 3.41
6771 8604 3.403038 CTGACGACTTTCCTGTTCCATT 58.597 45.455 0.00 0.00 0.00 3.16
6772 8605 3.815401 CTGACGACTTTCCTGTTCCATTT 59.185 43.478 0.00 0.00 0.00 2.32
6773 8606 4.963373 TGACGACTTTCCTGTTCCATTTA 58.037 39.130 0.00 0.00 0.00 1.40
6774 8607 4.753107 TGACGACTTTCCTGTTCCATTTAC 59.247 41.667 0.00 0.00 0.00 2.01
6775 8608 4.969484 ACGACTTTCCTGTTCCATTTACT 58.031 39.130 0.00 0.00 0.00 2.24
6776 8609 6.105397 ACGACTTTCCTGTTCCATTTACTA 57.895 37.500 0.00 0.00 0.00 1.82
6777 8610 6.708285 ACGACTTTCCTGTTCCATTTACTAT 58.292 36.000 0.00 0.00 0.00 2.12
6778 8611 7.844009 ACGACTTTCCTGTTCCATTTACTATA 58.156 34.615 0.00 0.00 0.00 1.31
6779 8612 8.483758 ACGACTTTCCTGTTCCATTTACTATAT 58.516 33.333 0.00 0.00 0.00 0.86
6780 8613 9.326413 CGACTTTCCTGTTCCATTTACTATATT 57.674 33.333 0.00 0.00 0.00 1.28
6784 8617 8.677148 TTCCTGTTCCATTTACTATATTGAGC 57.323 34.615 0.00 0.00 0.00 4.26
6785 8618 7.801104 TCCTGTTCCATTTACTATATTGAGCA 58.199 34.615 0.00 0.00 0.00 4.26
6786 8619 8.271458 TCCTGTTCCATTTACTATATTGAGCAA 58.729 33.333 0.00 0.00 0.00 3.91
6787 8620 8.562892 CCTGTTCCATTTACTATATTGAGCAAG 58.437 37.037 0.00 0.00 0.00 4.01
6788 8621 8.450578 TGTTCCATTTACTATATTGAGCAAGG 57.549 34.615 0.00 0.00 0.00 3.61
6789 8622 8.052748 TGTTCCATTTACTATATTGAGCAAGGT 58.947 33.333 0.00 0.00 0.00 3.50
6790 8623 8.903820 GTTCCATTTACTATATTGAGCAAGGTT 58.096 33.333 0.00 0.00 0.00 3.50
6791 8624 8.450578 TCCATTTACTATATTGAGCAAGGTTG 57.549 34.615 0.00 0.00 0.00 3.77
6792 8625 7.502226 TCCATTTACTATATTGAGCAAGGTTGG 59.498 37.037 0.00 0.00 0.00 3.77
6793 8626 6.693315 TTTACTATATTGAGCAAGGTTGGC 57.307 37.500 0.00 0.00 0.00 4.52
6794 8627 4.235079 ACTATATTGAGCAAGGTTGGCA 57.765 40.909 0.00 0.00 0.00 4.92
6795 8628 4.599041 ACTATATTGAGCAAGGTTGGCAA 58.401 39.130 0.00 0.00 0.00 4.52
6796 8629 5.203528 ACTATATTGAGCAAGGTTGGCAAT 58.796 37.500 1.92 0.00 34.05 3.56
6797 8630 5.658190 ACTATATTGAGCAAGGTTGGCAATT 59.342 36.000 1.92 0.00 32.13 2.32
6798 8631 2.529780 TTGAGCAAGGTTGGCAATTG 57.470 45.000 1.92 6.18 0.00 2.32
6799 8632 1.412079 TGAGCAAGGTTGGCAATTGT 58.588 45.000 13.42 3.01 0.00 2.71
6800 8633 1.761784 TGAGCAAGGTTGGCAATTGTT 59.238 42.857 13.42 8.61 0.00 2.83
6801 8634 2.961741 TGAGCAAGGTTGGCAATTGTTA 59.038 40.909 13.42 0.00 0.00 2.41
6802 8635 3.005684 TGAGCAAGGTTGGCAATTGTTAG 59.994 43.478 13.42 0.56 0.00 2.34
6803 8636 2.299867 AGCAAGGTTGGCAATTGTTAGG 59.700 45.455 13.42 0.00 0.00 2.69
6804 8637 2.298729 GCAAGGTTGGCAATTGTTAGGA 59.701 45.455 13.42 0.00 0.00 2.94
6805 8638 3.860754 GCAAGGTTGGCAATTGTTAGGAC 60.861 47.826 13.42 0.00 0.00 3.85
6806 8639 2.159382 AGGTTGGCAATTGTTAGGACG 58.841 47.619 1.92 0.00 0.00 4.79
6807 8640 1.201414 GGTTGGCAATTGTTAGGACGG 59.799 52.381 1.92 0.00 0.00 4.79
6808 8641 0.885196 TTGGCAATTGTTAGGACGGC 59.115 50.000 7.40 0.00 0.00 5.68
6809 8642 1.302383 TGGCAATTGTTAGGACGGCG 61.302 55.000 4.80 4.80 0.00 6.46
6810 8643 1.427819 GCAATTGTTAGGACGGCGG 59.572 57.895 13.24 0.00 0.00 6.13
6811 8644 1.303091 GCAATTGTTAGGACGGCGGT 61.303 55.000 13.24 0.00 0.00 5.68
6812 8645 0.725117 CAATTGTTAGGACGGCGGTC 59.275 55.000 15.59 15.59 42.66 4.79
6813 8646 0.322322 AATTGTTAGGACGGCGGTCA 59.678 50.000 23.82 3.66 45.28 4.02
6814 8647 0.539986 ATTGTTAGGACGGCGGTCAT 59.460 50.000 23.82 20.01 45.28 3.06
6815 8648 1.184431 TTGTTAGGACGGCGGTCATA 58.816 50.000 23.82 18.99 45.28 2.15
6816 8649 1.184431 TGTTAGGACGGCGGTCATAA 58.816 50.000 22.58 22.58 44.49 1.90
6818 8651 2.519377 TTAGGACGGCGGTCATAATG 57.481 50.000 22.58 0.00 42.57 1.90
6819 8652 1.405872 TAGGACGGCGGTCATAATGT 58.594 50.000 23.82 5.56 45.28 2.71
6820 8653 0.104304 AGGACGGCGGTCATAATGTC 59.896 55.000 23.82 6.61 45.28 3.06
6821 8654 0.179094 GGACGGCGGTCATAATGTCA 60.179 55.000 23.82 0.00 45.28 3.58
6822 8655 1.209128 GACGGCGGTCATAATGTCAG 58.791 55.000 18.61 0.00 42.91 3.51
6823 8656 0.179084 ACGGCGGTCATAATGTCAGG 60.179 55.000 13.24 0.00 0.00 3.86
6824 8657 0.104120 CGGCGGTCATAATGTCAGGA 59.896 55.000 0.00 0.00 0.00 3.86
6825 8658 1.270305 CGGCGGTCATAATGTCAGGAT 60.270 52.381 0.00 0.00 0.00 3.24
6826 8659 2.417719 GGCGGTCATAATGTCAGGATC 58.582 52.381 0.00 0.00 0.00 3.36
6827 8660 2.224281 GGCGGTCATAATGTCAGGATCA 60.224 50.000 0.00 0.00 0.00 2.92
6828 8661 3.557898 GGCGGTCATAATGTCAGGATCAT 60.558 47.826 0.00 0.00 0.00 2.45
6829 8662 4.067896 GCGGTCATAATGTCAGGATCATT 58.932 43.478 0.00 0.00 38.72 2.57
6830 8663 4.083643 GCGGTCATAATGTCAGGATCATTG 60.084 45.833 0.00 0.00 36.92 2.82
6831 8664 4.083643 CGGTCATAATGTCAGGATCATTGC 60.084 45.833 0.00 0.00 36.92 3.56
6832 8665 5.068636 GGTCATAATGTCAGGATCATTGCT 58.931 41.667 0.00 0.00 36.92 3.91
6833 8666 6.233434 GGTCATAATGTCAGGATCATTGCTA 58.767 40.000 0.00 0.00 36.92 3.49
6834 8667 6.712095 GGTCATAATGTCAGGATCATTGCTAA 59.288 38.462 0.00 0.00 36.92 3.09
6835 8668 7.094890 GGTCATAATGTCAGGATCATTGCTAAG 60.095 40.741 0.00 0.00 36.92 2.18
6836 8669 7.658982 GTCATAATGTCAGGATCATTGCTAAGA 59.341 37.037 0.00 0.00 36.92 2.10
6837 8670 8.380867 TCATAATGTCAGGATCATTGCTAAGAT 58.619 33.333 0.00 0.00 36.92 2.40
6838 8671 8.666573 CATAATGTCAGGATCATTGCTAAGATC 58.333 37.037 5.02 5.02 39.87 2.75
6839 8672 5.619132 TGTCAGGATCATTGCTAAGATCA 57.381 39.130 13.83 0.00 41.84 2.92
6840 8673 6.183810 TGTCAGGATCATTGCTAAGATCAT 57.816 37.500 13.83 5.38 41.84 2.45
6841 8674 6.598503 TGTCAGGATCATTGCTAAGATCATT 58.401 36.000 13.83 1.10 41.84 2.57
6842 8675 6.709397 TGTCAGGATCATTGCTAAGATCATTC 59.291 38.462 13.83 4.98 41.84 2.67
6843 8676 6.935771 GTCAGGATCATTGCTAAGATCATTCT 59.064 38.462 13.83 1.54 41.84 2.40
6844 8677 8.093307 GTCAGGATCATTGCTAAGATCATTCTA 58.907 37.037 13.83 0.00 41.84 2.10
6845 8678 8.312564 TCAGGATCATTGCTAAGATCATTCTAG 58.687 37.037 13.83 0.00 41.84 2.43
6846 8679 7.549842 CAGGATCATTGCTAAGATCATTCTAGG 59.450 40.741 13.83 0.00 41.84 3.02
6847 8680 7.457218 AGGATCATTGCTAAGATCATTCTAGGA 59.543 37.037 13.83 0.00 41.84 2.94
6848 8681 8.266473 GGATCATTGCTAAGATCATTCTAGGAT 58.734 37.037 13.83 0.00 41.84 3.24
6849 8682 9.669887 GATCATTGCTAAGATCATTCTAGGATT 57.330 33.333 8.23 0.00 40.23 3.01
6851 8684 9.857656 TCATTGCTAAGATCATTCTAGGATTTT 57.142 29.630 0.00 0.00 0.00 1.82
6897 8730 7.120923 TGTTACATAGTCTAGATGGTTTCCC 57.879 40.000 0.00 0.00 0.00 3.97
6898 8731 6.901300 TGTTACATAGTCTAGATGGTTTCCCT 59.099 38.462 0.00 0.00 0.00 4.20
6899 8732 8.063153 TGTTACATAGTCTAGATGGTTTCCCTA 58.937 37.037 0.00 0.00 0.00 3.53
6900 8733 9.091220 GTTACATAGTCTAGATGGTTTCCCTAT 57.909 37.037 0.00 0.00 0.00 2.57
6901 8734 7.546250 ACATAGTCTAGATGGTTTCCCTATG 57.454 40.000 15.77 15.77 37.56 2.23
6902 8735 7.076446 ACATAGTCTAGATGGTTTCCCTATGT 58.924 38.462 16.68 16.68 39.05 2.29
6903 8736 7.569111 ACATAGTCTAGATGGTTTCCCTATGTT 59.431 37.037 16.68 7.02 40.23 2.71
6904 8737 6.893020 AGTCTAGATGGTTTCCCTATGTTT 57.107 37.500 0.00 0.00 0.00 2.83
6905 8738 6.890293 AGTCTAGATGGTTTCCCTATGTTTC 58.110 40.000 0.00 0.00 0.00 2.78
6906 8739 6.443849 AGTCTAGATGGTTTCCCTATGTTTCA 59.556 38.462 0.00 0.00 0.00 2.69
6907 8740 7.037586 AGTCTAGATGGTTTCCCTATGTTTCAA 60.038 37.037 0.00 0.00 0.00 2.69
6908 8741 7.065923 GTCTAGATGGTTTCCCTATGTTTCAAC 59.934 40.741 0.00 0.00 0.00 3.18
6909 8742 5.892348 AGATGGTTTCCCTATGTTTCAACT 58.108 37.500 0.00 0.00 0.00 3.16
6910 8743 5.946377 AGATGGTTTCCCTATGTTTCAACTC 59.054 40.000 0.00 0.00 0.00 3.01
6911 8744 5.055265 TGGTTTCCCTATGTTTCAACTCA 57.945 39.130 0.00 0.00 0.00 3.41
6912 8745 5.450453 TGGTTTCCCTATGTTTCAACTCAA 58.550 37.500 0.00 0.00 0.00 3.02
6913 8746 5.300792 TGGTTTCCCTATGTTTCAACTCAAC 59.699 40.000 0.00 0.00 0.00 3.18
6914 8747 5.278808 GGTTTCCCTATGTTTCAACTCAACC 60.279 44.000 0.00 0.00 0.00 3.77
6915 8748 4.715534 TCCCTATGTTTCAACTCAACCA 57.284 40.909 0.00 0.00 0.00 3.67
6916 8749 5.055265 TCCCTATGTTTCAACTCAACCAA 57.945 39.130 0.00 0.00 0.00 3.67
6917 8750 5.450453 TCCCTATGTTTCAACTCAACCAAA 58.550 37.500 0.00 0.00 0.00 3.28
6918 8751 6.074648 TCCCTATGTTTCAACTCAACCAAAT 58.925 36.000 0.00 0.00 0.00 2.32
6919 8752 6.553100 TCCCTATGTTTCAACTCAACCAAATT 59.447 34.615 0.00 0.00 0.00 1.82
6920 8753 7.070571 TCCCTATGTTTCAACTCAACCAAATTT 59.929 33.333 0.00 0.00 0.00 1.82
6921 8754 7.171337 CCCTATGTTTCAACTCAACCAAATTTG 59.829 37.037 11.40 11.40 0.00 2.32
6922 8755 5.793026 TGTTTCAACTCAACCAAATTTGC 57.207 34.783 12.92 0.00 0.00 3.68
6923 8756 5.240891 TGTTTCAACTCAACCAAATTTGCA 58.759 33.333 12.92 0.00 0.00 4.08
6924 8757 5.702670 TGTTTCAACTCAACCAAATTTGCAA 59.297 32.000 12.92 0.00 0.00 4.08
6925 8758 6.205464 TGTTTCAACTCAACCAAATTTGCAAA 59.795 30.769 15.44 15.44 0.00 3.68
6926 8759 6.808008 TTCAACTCAACCAAATTTGCAAAA 57.192 29.167 17.19 0.00 0.00 2.44
6927 8760 6.998968 TCAACTCAACCAAATTTGCAAAAT 57.001 29.167 17.19 4.62 0.00 1.82
6928 8761 7.014092 TCAACTCAACCAAATTTGCAAAATC 57.986 32.000 17.19 0.00 0.00 2.17
6929 8762 6.822676 TCAACTCAACCAAATTTGCAAAATCT 59.177 30.769 17.19 0.72 0.00 2.40
6930 8763 7.984050 TCAACTCAACCAAATTTGCAAAATCTA 59.016 29.630 17.19 0.00 0.00 1.98
6931 8764 7.951530 ACTCAACCAAATTTGCAAAATCTAG 57.048 32.000 17.19 6.97 0.00 2.43
6932 8765 7.725251 ACTCAACCAAATTTGCAAAATCTAGA 58.275 30.769 17.19 7.77 0.00 2.43
6933 8766 7.869429 ACTCAACCAAATTTGCAAAATCTAGAG 59.131 33.333 17.19 17.63 0.00 2.43
6934 8767 7.950512 TCAACCAAATTTGCAAAATCTAGAGA 58.049 30.769 17.19 7.43 0.00 3.10
6935 8768 8.420222 TCAACCAAATTTGCAAAATCTAGAGAA 58.580 29.630 17.19 0.00 0.00 2.87
6936 8769 9.044150 CAACCAAATTTGCAAAATCTAGAGAAA 57.956 29.630 17.19 0.00 0.00 2.52
6937 8770 9.783081 AACCAAATTTGCAAAATCTAGAGAAAT 57.217 25.926 17.19 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.244526 ACAACTATCACACATGACCAGCA 60.245 43.478 0.00 0.00 37.79 4.41
22 23 5.048364 GGCCAACAATACAACAACTATCACA 60.048 40.000 0.00 0.00 0.00 3.58
115 116 5.644188 AGGGCACTGCACCATAATATTATT 58.356 37.500 5.18 0.00 28.43 1.40
214 215 2.104111 TCGAACACCACCAAACTCTCAT 59.896 45.455 0.00 0.00 0.00 2.90
243 244 7.208064 TGCTGGAATTTACCCTAGACTTATT 57.792 36.000 0.00 0.00 0.00 1.40
300 301 5.189180 AGCATTCCTTTCCAGTCATAACTC 58.811 41.667 0.00 0.00 31.71 3.01
317 318 6.441093 TTCCAGTGAAATACATGAGCATTC 57.559 37.500 0.00 0.00 0.00 2.67
335 336 3.318839 TGTGAAAAGTTGATGCCTTCCAG 59.681 43.478 0.00 0.00 0.00 3.86
336 337 3.295093 TGTGAAAAGTTGATGCCTTCCA 58.705 40.909 0.00 0.00 0.00 3.53
351 352 4.083324 CGTCGTAGTAACTACCCTGTGAAA 60.083 45.833 0.00 0.00 33.79 2.69
356 357 3.002791 TGTCGTCGTAGTAACTACCCTG 58.997 50.000 0.00 0.00 33.79 4.45
362 363 3.803555 CTCGTTTGTCGTCGTAGTAACT 58.196 45.455 0.00 0.00 40.80 2.24
412 413 3.581332 CTCCTCCCTATTACCCGCATTTA 59.419 47.826 0.00 0.00 0.00 1.40
437 438 3.046283 ACCACCACTATAGATGAGGCA 57.954 47.619 6.78 0.00 0.00 4.75
457 458 7.183839 CCCCCACATAAGACCTATAATTCCATA 59.816 40.741 0.00 0.00 0.00 2.74
458 459 6.011628 CCCCCACATAAGACCTATAATTCCAT 60.012 42.308 0.00 0.00 0.00 3.41
479 483 4.462133 TGCATCCATGTGGCCCCC 62.462 66.667 0.00 0.00 34.44 5.40
489 493 3.010027 TCCCTTCTTTGTATGTGCATCCA 59.990 43.478 0.00 0.00 0.00 3.41
491 495 4.517285 TCTCCCTTCTTTGTATGTGCATC 58.483 43.478 0.00 0.00 0.00 3.91
492 496 4.521146 CTCTCCCTTCTTTGTATGTGCAT 58.479 43.478 0.00 0.00 0.00 3.96
493 497 3.869912 GCTCTCCCTTCTTTGTATGTGCA 60.870 47.826 0.00 0.00 0.00 4.57
496 513 3.185455 AGGCTCTCCCTTCTTTGTATGT 58.815 45.455 0.00 0.00 43.06 2.29
506 619 0.333312 TCTTCTCGAGGCTCTCCCTT 59.667 55.000 13.56 0.00 46.60 3.95
515 628 2.359531 GAGGGTGTGTATCTTCTCGAGG 59.640 54.545 13.56 0.00 0.00 4.63
583 730 8.761575 TGATAATTTTGTCAAAAGCTTGATCC 57.238 30.769 15.57 0.00 43.39 3.36
612 759 4.589908 ACTTACTGGTTAAGCATTGGAGG 58.410 43.478 7.98 0.00 41.03 4.30
692 1056 7.414222 AGTGATAACTGCATCATTTGGATTT 57.586 32.000 0.00 0.00 37.28 2.17
693 1057 7.414222 AAGTGATAACTGCATCATTTGGATT 57.586 32.000 0.00 0.00 37.28 3.01
694 1058 7.776969 AGTAAGTGATAACTGCATCATTTGGAT 59.223 33.333 6.15 0.00 36.09 3.41
695 1059 7.112122 AGTAAGTGATAACTGCATCATTTGGA 58.888 34.615 6.15 0.00 36.09 3.53
696 1060 7.325660 AGTAAGTGATAACTGCATCATTTGG 57.674 36.000 6.15 0.00 36.09 3.28
698 1062 9.836864 TGATAGTAAGTGATAACTGCATCATTT 57.163 29.630 2.03 2.03 38.16 2.32
699 1063 9.265901 GTGATAGTAAGTGATAACTGCATCATT 57.734 33.333 0.00 0.00 37.28 2.57
718 1082 0.595053 CCAAGCGCGATCGTGATAGT 60.595 55.000 31.43 9.19 38.14 2.12
722 1086 4.812476 CCCCAAGCGCGATCGTGA 62.812 66.667 31.43 0.00 38.14 4.35
764 1385 4.680237 TTCGTGGAGGCCAGCGTG 62.680 66.667 5.01 0.00 32.34 5.34
765 1386 4.681978 GTTCGTGGAGGCCAGCGT 62.682 66.667 5.01 0.00 32.34 5.07
796 1417 0.745468 GTTAGGGTCTCTAGGGCGTG 59.255 60.000 0.00 0.00 0.00 5.34
799 1420 2.446285 TCTAGGTTAGGGTCTCTAGGGC 59.554 54.545 0.00 0.00 32.41 5.19
804 1425 4.963628 GGAATGTTCTAGGTTAGGGTCTCT 59.036 45.833 0.00 0.00 0.00 3.10
845 1466 7.978414 TGTTAGATGTGTGCAAAATTTGAAAGA 59.022 29.630 10.26 0.00 0.00 2.52
1561 2193 6.888632 ACAAAATCCTAGATGCAGAAATGTCT 59.111 34.615 0.00 0.00 32.85 3.41
1772 2405 0.942252 GAAACAGGACACCCGTCAAC 59.058 55.000 0.00 0.00 44.54 3.18
1831 2464 4.379652 CTTGTTTGGGAAAGGTTCAATGG 58.620 43.478 0.00 0.00 0.00 3.16
1832 2465 4.379652 CCTTGTTTGGGAAAGGTTCAATG 58.620 43.478 0.00 0.00 38.53 2.82
1833 2466 4.687901 CCTTGTTTGGGAAAGGTTCAAT 57.312 40.909 0.00 0.00 38.53 2.57
1853 2486 1.522900 TCCCCAATCAGGATCTTCCC 58.477 55.000 0.00 0.00 41.22 3.97
1908 2545 4.514585 ACCGTGCAAGGCCAACCA 62.515 61.111 19.37 0.00 39.06 3.67
2076 2716 5.105146 AGCTTCCCTGACTTATGAGTTACAG 60.105 44.000 0.00 0.00 35.88 2.74
2336 2991 2.093394 GCCCTTCTCTTACTCCAGGTTC 60.093 54.545 0.00 0.00 0.00 3.62
2683 3350 6.610075 AGTTTTGATGGGCTAACAAATCAT 57.390 33.333 14.05 0.69 34.33 2.45
2712 3379 7.829378 AGCTTAGTTTCTATCCTAACAAACG 57.171 36.000 0.00 0.00 34.54 3.60
2764 3433 3.989817 TCACGTGTCATTGACATTCTCAG 59.010 43.478 21.60 11.62 44.63 3.35
2815 3484 5.477510 TGAATAAAAGCATGTCGGCAATTT 58.522 33.333 0.00 0.00 35.83 1.82
2845 3514 6.022107 TCTAACACCTAAGGCCTATACTCA 57.978 41.667 5.16 0.00 0.00 3.41
2846 3515 7.541916 AATCTAACACCTAAGGCCTATACTC 57.458 40.000 5.16 0.00 0.00 2.59
2890 3559 8.713971 TGTATGTCTATTGATACCCATTTCAGT 58.286 33.333 0.00 0.00 0.00 3.41
3104 3773 8.477984 TTGGCATCATTATTAAAGAAAACAGC 57.522 30.769 0.00 0.00 0.00 4.40
3144 3813 5.520748 TCCATAAAAGAAAGGAGCCTTCT 57.479 39.130 1.62 0.00 34.84 2.85
3292 3979 1.345741 AGGCATGACCACTCGATATGG 59.654 52.381 13.06 13.06 43.14 2.74
3339 4026 9.684448 TCACTATTTTTACATCAATTTTTCGCA 57.316 25.926 0.00 0.00 0.00 5.10
3348 4035 9.691362 GAAAGGCTTTCACTATTTTTACATCAA 57.309 29.630 29.99 0.00 39.45 2.57
3349 4036 8.855110 TGAAAGGCTTTCACTATTTTTACATCA 58.145 29.630 32.85 10.31 44.21 3.07
3391 4078 6.630071 AGTTGCACAGACTAACAAATGTTTT 58.370 32.000 3.85 0.00 39.31 2.43
3400 4087 2.357637 TGCCAAAGTTGCACAGACTAAC 59.642 45.455 0.00 0.00 32.85 2.34
3435 4130 3.916761 TGTCACACGGAAACTATGTACC 58.083 45.455 0.00 0.00 0.00 3.34
3548 4244 3.394674 TGTCTGATCTGCGTAAAACCA 57.605 42.857 0.00 0.00 0.00 3.67
3550 4246 7.863375 AGTCTATATGTCTGATCTGCGTAAAAC 59.137 37.037 0.00 0.00 0.00 2.43
3843 4539 3.844577 AAGAATGATGTCAGTGCTTGC 57.155 42.857 0.00 0.00 0.00 4.01
4041 4739 0.537188 ATACAGTCAGCACTTCCCCG 59.463 55.000 0.00 0.00 0.00 5.73
4061 4759 7.009174 CACCACTTCGCCAAACATTAAATAATC 59.991 37.037 0.00 0.00 0.00 1.75
4086 4784 7.826918 TGCAGGAAAATCATGATTATCATCA 57.173 32.000 21.00 11.88 43.85 3.07
4094 4792 2.367567 GGCCATGCAGGAAAATCATGAT 59.632 45.455 1.18 1.18 39.80 2.45
4101 4799 2.599875 TGCGGCCATGCAGGAAAA 60.600 55.556 2.24 0.00 40.62 2.29
4387 5115 1.135141 GCCTATTGTTTGCGCATTCCA 60.135 47.619 12.75 5.36 0.00 3.53
4420 5148 5.298989 ACATACTACAAAACACCACTGGA 57.701 39.130 0.71 0.00 0.00 3.86
4478 5206 6.748132 TCCACATTCTTTCAATTGGAGTTTC 58.252 36.000 5.42 0.00 0.00 2.78
4573 5303 2.099141 TTTGTTCAGATGAGGAGGCG 57.901 50.000 0.00 0.00 0.00 5.52
4575 5305 3.189287 CGGTTTTTGTTCAGATGAGGAGG 59.811 47.826 0.00 0.00 0.00 4.30
4651 5381 2.290705 GGACTAAAAGCAGGGGTGCTAA 60.291 50.000 0.00 0.00 45.54 3.09
4656 5386 0.404426 GTGGGACTAAAAGCAGGGGT 59.596 55.000 0.00 0.00 0.00 4.95
4699 5429 2.295885 CCAGAAGGCTATTCTGCAAGG 58.704 52.381 20.27 8.51 43.33 3.61
4709 5439 0.324943 GTCTTGCACCCAGAAGGCTA 59.675 55.000 0.00 0.00 40.58 3.93
4840 5570 9.498176 GGAGGAAATTCTACAAACTAAACACTA 57.502 33.333 0.00 0.00 0.00 2.74
4974 5705 8.614469 ATGTCCAAAAGAGTAAGAAAGAGAAG 57.386 34.615 0.00 0.00 0.00 2.85
5035 5766 6.056236 GGTCTTTCTGACTGGTTCTTAGTTT 58.944 40.000 0.00 0.00 44.74 2.66
5159 5890 0.535780 CAGCCTGAAACTGCTCACCA 60.536 55.000 0.00 0.00 35.12 4.17
5210 5941 2.289945 CCTGTACCAAGAAAGCTCTGCT 60.290 50.000 0.00 0.00 42.56 4.24
5339 6070 6.604795 AGAAGTTTCCTGGATATGGACAATTG 59.395 38.462 3.24 3.24 32.65 2.32
5345 6076 6.126507 TGCAATAGAAGTTTCCTGGATATGGA 60.127 38.462 0.00 0.00 0.00 3.41
5649 6380 6.211384 TCACTATCAATCTCCAACAGACTCAA 59.789 38.462 0.00 0.00 32.26 3.02
5741 6472 2.203070 GGGCCATGTGTAGAGCCG 60.203 66.667 4.39 0.00 46.75 5.52
5755 6486 1.269051 GCTTACGCAAACATATGGGGC 60.269 52.381 7.80 6.56 37.55 5.80
5799 6530 0.107017 AGAAACAGCGGGATGGATGG 60.107 55.000 0.00 0.00 0.00 3.51
5800 6531 1.755179 AAGAAACAGCGGGATGGATG 58.245 50.000 0.00 0.00 0.00 3.51
5801 6532 2.514458 AAAGAAACAGCGGGATGGAT 57.486 45.000 0.00 0.00 0.00 3.41
5802 6533 2.286365 AAAAGAAACAGCGGGATGGA 57.714 45.000 0.00 0.00 0.00 3.41
5843 6574 2.492484 ACGGGAGCTGTTTAGTCTACTG 59.508 50.000 0.00 0.00 0.00 2.74
5882 6615 8.519526 AGCAAAAATGAATATCGTTCTTACCAA 58.480 29.630 0.00 0.00 0.00 3.67
5920 6653 0.032813 ACATCCTGGGGCCTGAAATG 60.033 55.000 0.84 5.76 0.00 2.32
5965 6698 0.829333 CCAGGTAGCTGTCAGCAGAT 59.171 55.000 26.23 8.89 45.56 2.90
6020 6753 2.873609 CTCAAGGTGATGAGTGTCTCG 58.126 52.381 0.00 0.00 41.54 4.04
6246 6979 6.754193 TCAATGACCATTTGTTTTCTAACCC 58.246 36.000 0.00 0.00 33.15 4.11
6249 6982 9.190858 CGAAATCAATGACCATTTGTTTTCTAA 57.809 29.630 13.63 0.00 0.00 2.10
6270 7003 6.094881 TCCAACACTCAAGAAAGAAACGAAAT 59.905 34.615 0.00 0.00 0.00 2.17
6284 7017 3.070159 CCTCTCAAGTCTCCAACACTCAA 59.930 47.826 0.00 0.00 0.00 3.02
6288 7021 1.694696 ACCCTCTCAAGTCTCCAACAC 59.305 52.381 0.00 0.00 0.00 3.32
6289 7022 1.971357 GACCCTCTCAAGTCTCCAACA 59.029 52.381 0.00 0.00 0.00 3.33
6290 7023 1.971357 TGACCCTCTCAAGTCTCCAAC 59.029 52.381 0.00 0.00 34.02 3.77
6291 7024 2.368875 GTTGACCCTCTCAAGTCTCCAA 59.631 50.000 0.00 0.00 39.69 3.53
6293 7026 1.067495 CGTTGACCCTCTCAAGTCTCC 60.067 57.143 0.00 0.00 39.69 3.71
6312 7045 3.487879 GGTTTTGGTTTACACACCTCACG 60.488 47.826 0.00 0.00 37.75 4.35
6313 7046 3.181484 GGGTTTTGGTTTACACACCTCAC 60.181 47.826 0.00 0.00 37.75 3.51
6314 7047 3.025262 GGGTTTTGGTTTACACACCTCA 58.975 45.455 0.00 0.00 37.75 3.86
6315 7048 2.033675 CGGGTTTTGGTTTACACACCTC 59.966 50.000 0.00 0.00 37.75 3.85
6316 7049 2.025898 CGGGTTTTGGTTTACACACCT 58.974 47.619 0.00 0.00 37.75 4.00
6317 7050 1.750206 ACGGGTTTTGGTTTACACACC 59.250 47.619 0.00 0.00 37.34 4.16
6318 7051 3.507103 AACGGGTTTTGGTTTACACAC 57.493 42.857 0.00 0.00 0.00 3.82
6319 7052 3.846360 CAAACGGGTTTTGGTTTACACA 58.154 40.909 0.00 0.00 40.98 3.72
6349 7082 0.975040 TGCCAAACACTTTGCCAGGT 60.975 50.000 0.00 0.00 39.31 4.00
6350 7083 0.177604 TTGCCAAACACTTTGCCAGG 59.822 50.000 0.00 0.00 39.31 4.45
6353 7086 1.289276 CAGTTGCCAAACACTTTGCC 58.711 50.000 0.00 0.00 38.88 4.52
6355 7088 2.958213 ACACAGTTGCCAAACACTTTG 58.042 42.857 0.00 0.00 38.88 2.77
6356 7089 3.676291 AACACAGTTGCCAAACACTTT 57.324 38.095 0.00 0.00 38.88 2.66
6360 7093 5.582665 GGAATAAAAACACAGTTGCCAAACA 59.417 36.000 0.00 0.00 38.88 2.83
6385 7119 5.116180 CAGAAACAACTCTTACCACACTCA 58.884 41.667 0.00 0.00 0.00 3.41
6386 7120 4.511826 CCAGAAACAACTCTTACCACACTC 59.488 45.833 0.00 0.00 0.00 3.51
6390 7124 4.196971 ACACCAGAAACAACTCTTACCAC 58.803 43.478 0.00 0.00 0.00 4.16
6400 8119 5.883115 TCATACTTGACAACACCAGAAACAA 59.117 36.000 0.00 0.00 0.00 2.83
6424 8256 5.402630 AGGGTGGGTATTTCACAAAAGAAT 58.597 37.500 0.00 0.00 36.90 2.40
6461 8293 7.359849 GGTTGGTATTCTCAAGTAGAACGAAAC 60.360 40.741 0.00 0.00 46.90 2.78
6462 8294 6.647895 GGTTGGTATTCTCAAGTAGAACGAAA 59.352 38.462 0.00 0.00 46.90 3.46
6467 8299 7.472381 AACTTCGGTTGGTATTCTCAAGTAGAA 60.472 37.037 0.00 0.00 41.47 2.10
6475 8307 5.963594 AGAGTAACTTCGGTTGGTATTCTC 58.036 41.667 0.00 0.00 38.76 2.87
6476 8308 5.997384 AGAGTAACTTCGGTTGGTATTCT 57.003 39.130 0.00 0.00 38.76 2.40
6477 8309 6.644191 GAAGAGTAACTTCGGTTGGTATTC 57.356 41.667 0.00 0.00 44.15 1.75
6489 8322 5.012871 GGAGGGTTTAGGTGAAGAGTAACTT 59.987 44.000 0.00 0.00 42.03 2.66
6496 8329 2.547990 GAGGGAGGGTTTAGGTGAAGA 58.452 52.381 0.00 0.00 0.00 2.87
6507 8340 0.178882 AGTTTTACGGGAGGGAGGGT 60.179 55.000 0.00 0.00 0.00 4.34
6508 8341 0.540454 GAGTTTTACGGGAGGGAGGG 59.460 60.000 0.00 0.00 0.00 4.30
6509 8342 1.272807 TGAGTTTTACGGGAGGGAGG 58.727 55.000 0.00 0.00 0.00 4.30
6510 8343 3.412237 TTTGAGTTTTACGGGAGGGAG 57.588 47.619 0.00 0.00 0.00 4.30
6511 8344 3.560453 CCATTTGAGTTTTACGGGAGGGA 60.560 47.826 0.00 0.00 0.00 4.20
6512 8345 2.752903 CCATTTGAGTTTTACGGGAGGG 59.247 50.000 0.00 0.00 0.00 4.30
6513 8346 3.418047 ACCATTTGAGTTTTACGGGAGG 58.582 45.455 0.00 0.00 0.00 4.30
6514 8347 4.069304 TGACCATTTGAGTTTTACGGGAG 58.931 43.478 0.00 0.00 0.00 4.30
6515 8348 4.088056 TGACCATTTGAGTTTTACGGGA 57.912 40.909 0.00 0.00 0.00 5.14
6516 8349 5.413213 TGTATGACCATTTGAGTTTTACGGG 59.587 40.000 0.00 0.00 0.00 5.28
6517 8350 6.489127 TGTATGACCATTTGAGTTTTACGG 57.511 37.500 0.00 0.00 0.00 4.02
6518 8351 7.802738 TCTTGTATGACCATTTGAGTTTTACG 58.197 34.615 0.00 0.00 0.00 3.18
6524 8357 9.520515 AGTAAATTCTTGTATGACCATTTGAGT 57.479 29.630 0.00 0.00 0.00 3.41
6548 8381 8.730680 ACGTCAGAATTTTAGCATTTCATTAGT 58.269 29.630 0.00 0.00 0.00 2.24
6549 8382 9.559958 AACGTCAGAATTTTAGCATTTCATTAG 57.440 29.630 0.00 0.00 0.00 1.73
6551 8384 9.559958 CTAACGTCAGAATTTTAGCATTTCATT 57.440 29.630 0.00 0.00 0.00 2.57
6552 8385 8.946085 TCTAACGTCAGAATTTTAGCATTTCAT 58.054 29.630 0.00 0.00 0.00 2.57
6553 8386 8.317891 TCTAACGTCAGAATTTTAGCATTTCA 57.682 30.769 0.00 0.00 0.00 2.69
6554 8387 9.774742 AATCTAACGTCAGAATTTTAGCATTTC 57.225 29.630 0.00 0.00 0.00 2.17
6562 8395 8.573035 TGGCTAAAAATCTAACGTCAGAATTTT 58.427 29.630 16.67 16.67 39.66 1.82
6563 8396 8.106247 TGGCTAAAAATCTAACGTCAGAATTT 57.894 30.769 0.00 0.00 30.63 1.82
6564 8397 7.681939 TGGCTAAAAATCTAACGTCAGAATT 57.318 32.000 0.00 0.00 0.00 2.17
6565 8398 7.552687 TCATGGCTAAAAATCTAACGTCAGAAT 59.447 33.333 0.00 0.00 0.00 2.40
6566 8399 6.876789 TCATGGCTAAAAATCTAACGTCAGAA 59.123 34.615 0.00 0.00 0.00 3.02
6567 8400 6.312918 GTCATGGCTAAAAATCTAACGTCAGA 59.687 38.462 0.00 0.00 0.00 3.27
6568 8401 6.092122 TGTCATGGCTAAAAATCTAACGTCAG 59.908 38.462 0.00 0.00 0.00 3.51
6569 8402 5.935206 TGTCATGGCTAAAAATCTAACGTCA 59.065 36.000 0.00 0.00 0.00 4.35
6570 8403 6.417191 TGTCATGGCTAAAAATCTAACGTC 57.583 37.500 0.00 0.00 0.00 4.34
6571 8404 6.811253 TTGTCATGGCTAAAAATCTAACGT 57.189 33.333 0.00 0.00 0.00 3.99
6572 8405 8.687824 AATTTGTCATGGCTAAAAATCTAACG 57.312 30.769 0.00 0.00 0.00 3.18
6578 8411 9.651913 ACGATTTAATTTGTCATGGCTAAAAAT 57.348 25.926 0.00 1.49 0.00 1.82
6579 8412 8.920665 CACGATTTAATTTGTCATGGCTAAAAA 58.079 29.630 0.00 0.00 0.00 1.94
6580 8413 7.543868 CCACGATTTAATTTGTCATGGCTAAAA 59.456 33.333 0.00 0.00 0.00 1.52
6581 8414 7.032580 CCACGATTTAATTTGTCATGGCTAAA 58.967 34.615 0.00 0.00 0.00 1.85
6582 8415 6.559810 CCACGATTTAATTTGTCATGGCTAA 58.440 36.000 0.00 0.00 0.00 3.09
6583 8416 5.449862 GCCACGATTTAATTTGTCATGGCTA 60.450 40.000 13.73 0.00 45.31 3.93
6584 8417 4.677779 GCCACGATTTAATTTGTCATGGCT 60.678 41.667 13.73 0.00 45.31 4.75
6585 8418 3.551485 GCCACGATTTAATTTGTCATGGC 59.449 43.478 8.17 8.17 42.93 4.40
6586 8419 4.742417 TGCCACGATTTAATTTGTCATGG 58.258 39.130 0.00 0.00 0.00 3.66
6587 8420 6.890663 ATTGCCACGATTTAATTTGTCATG 57.109 33.333 0.00 0.00 0.00 3.07
6588 8421 7.903995 AAATTGCCACGATTTAATTTGTCAT 57.096 28.000 0.00 0.00 33.05 3.06
6589 8422 8.867935 CATAAATTGCCACGATTTAATTTGTCA 58.132 29.630 0.00 0.00 35.22 3.58
6590 8423 8.868916 ACATAAATTGCCACGATTTAATTTGTC 58.131 29.630 0.00 0.00 35.22 3.18
6591 8424 8.770438 ACATAAATTGCCACGATTTAATTTGT 57.230 26.923 0.00 2.98 35.22 2.83
6592 8425 9.475505 CAACATAAATTGCCACGATTTAATTTG 57.524 29.630 0.00 6.86 35.22 2.32
6593 8426 8.663911 CCAACATAAATTGCCACGATTTAATTT 58.336 29.630 4.55 0.00 36.83 1.82
6594 8427 7.201600 GCCAACATAAATTGCCACGATTTAATT 60.202 33.333 4.55 1.25 33.92 1.40
6595 8428 6.257630 GCCAACATAAATTGCCACGATTTAAT 59.742 34.615 4.55 0.00 33.92 1.40
6596 8429 5.578727 GCCAACATAAATTGCCACGATTTAA 59.421 36.000 4.55 0.00 33.92 1.52
6597 8430 5.105752 GCCAACATAAATTGCCACGATTTA 58.894 37.500 0.00 3.18 34.51 1.40
6598 8431 3.932089 GCCAACATAAATTGCCACGATTT 59.068 39.130 0.00 0.00 0.00 2.17
6599 8432 3.520569 GCCAACATAAATTGCCACGATT 58.479 40.909 0.00 0.00 0.00 3.34
6600 8433 2.159114 GGCCAACATAAATTGCCACGAT 60.159 45.455 0.00 0.00 0.00 3.73
6601 8434 1.203523 GGCCAACATAAATTGCCACGA 59.796 47.619 0.00 0.00 0.00 4.35
6602 8435 1.204467 AGGCCAACATAAATTGCCACG 59.796 47.619 5.01 0.00 31.82 4.94
6603 8436 3.333029 AAGGCCAACATAAATTGCCAC 57.667 42.857 5.01 0.00 31.82 5.01
6604 8437 3.450457 CCTAAGGCCAACATAAATTGCCA 59.550 43.478 5.01 0.00 31.82 4.92
6605 8438 3.704061 TCCTAAGGCCAACATAAATTGCC 59.296 43.478 5.01 0.00 0.00 4.52
6606 8439 5.291971 CATCCTAAGGCCAACATAAATTGC 58.708 41.667 5.01 0.00 0.00 3.56
6607 8440 5.739935 GCCATCCTAAGGCCAACATAAATTG 60.740 44.000 5.01 0.00 46.50 2.32
6608 8441 4.344968 GCCATCCTAAGGCCAACATAAATT 59.655 41.667 5.01 0.00 46.50 1.82
6609 8442 3.897505 GCCATCCTAAGGCCAACATAAAT 59.102 43.478 5.01 0.00 46.50 1.40
6610 8443 3.295973 GCCATCCTAAGGCCAACATAAA 58.704 45.455 5.01 0.00 46.50 1.40
6611 8444 2.944129 GCCATCCTAAGGCCAACATAA 58.056 47.619 5.01 0.00 46.50 1.90
6612 8445 2.656947 GCCATCCTAAGGCCAACATA 57.343 50.000 5.01 0.00 46.50 2.29
6613 8446 3.520623 GCCATCCTAAGGCCAACAT 57.479 52.632 5.01 0.00 46.50 2.71
6620 8453 8.912988 TCACTAATTAAATTTGCCATCCTAAGG 58.087 33.333 0.00 0.00 0.00 2.69
6621 8454 9.956720 CTCACTAATTAAATTTGCCATCCTAAG 57.043 33.333 0.00 0.00 0.00 2.18
6622 8455 8.413229 GCTCACTAATTAAATTTGCCATCCTAA 58.587 33.333 0.00 0.00 0.00 2.69
6623 8456 7.559533 TGCTCACTAATTAAATTTGCCATCCTA 59.440 33.333 0.00 0.00 0.00 2.94
6624 8457 6.380846 TGCTCACTAATTAAATTTGCCATCCT 59.619 34.615 0.00 0.00 0.00 3.24
6625 8458 6.476706 GTGCTCACTAATTAAATTTGCCATCC 59.523 38.462 0.00 0.00 0.00 3.51
6626 8459 7.035004 TGTGCTCACTAATTAAATTTGCCATC 58.965 34.615 0.00 0.00 0.00 3.51
6627 8460 6.934056 TGTGCTCACTAATTAAATTTGCCAT 58.066 32.000 0.00 0.00 0.00 4.40
6628 8461 6.338214 TGTGCTCACTAATTAAATTTGCCA 57.662 33.333 0.00 0.00 0.00 4.92
6629 8462 6.644592 TGTTGTGCTCACTAATTAAATTTGCC 59.355 34.615 0.00 0.00 0.00 4.52
6630 8463 7.636259 TGTTGTGCTCACTAATTAAATTTGC 57.364 32.000 0.00 0.00 0.00 3.68
6636 8469 9.462174 CAAGAAATTGTTGTGCTCACTAATTAA 57.538 29.630 8.82 0.00 0.00 1.40
6637 8470 8.081633 CCAAGAAATTGTTGTGCTCACTAATTA 58.918 33.333 2.22 0.00 0.00 1.40
6638 8471 6.925165 CCAAGAAATTGTTGTGCTCACTAATT 59.075 34.615 2.22 0.00 0.00 1.40
6639 8472 6.449698 CCAAGAAATTGTTGTGCTCACTAAT 58.550 36.000 2.22 0.00 0.00 1.73
6640 8473 5.735922 GCCAAGAAATTGTTGTGCTCACTAA 60.736 40.000 2.22 0.00 0.00 2.24
6641 8474 4.261572 GCCAAGAAATTGTTGTGCTCACTA 60.262 41.667 2.22 0.00 0.00 2.74
6642 8475 3.491447 GCCAAGAAATTGTTGTGCTCACT 60.491 43.478 2.22 0.00 0.00 3.41
6643 8476 2.796593 GCCAAGAAATTGTTGTGCTCAC 59.203 45.455 2.22 0.00 0.00 3.51
6644 8477 2.694628 AGCCAAGAAATTGTTGTGCTCA 59.305 40.909 11.10 0.00 30.36 4.26
6645 8478 3.375782 AGCCAAGAAATTGTTGTGCTC 57.624 42.857 11.10 0.00 30.36 4.26
6646 8479 3.118665 ACAAGCCAAGAAATTGTTGTGCT 60.119 39.130 11.10 11.10 33.49 4.40
6647 8480 3.197265 ACAAGCCAAGAAATTGTTGTGC 58.803 40.909 2.22 5.41 33.49 4.57
6648 8481 5.220643 GGAAACAAGCCAAGAAATTGTTGTG 60.221 40.000 2.22 0.00 44.18 3.33
6649 8482 4.875536 GGAAACAAGCCAAGAAATTGTTGT 59.124 37.500 2.22 0.00 44.18 3.32
6650 8483 5.006941 CAGGAAACAAGCCAAGAAATTGTTG 59.993 40.000 3.55 0.00 44.18 3.33
6651 8484 5.118286 CAGGAAACAAGCCAAGAAATTGTT 58.882 37.500 0.00 0.00 46.24 2.83
6652 8485 4.696455 CAGGAAACAAGCCAAGAAATTGT 58.304 39.130 0.00 0.00 38.76 2.71
6653 8486 3.495753 GCAGGAAACAAGCCAAGAAATTG 59.504 43.478 0.00 0.00 0.00 2.32
6654 8487 3.389002 AGCAGGAAACAAGCCAAGAAATT 59.611 39.130 0.00 0.00 34.58 1.82
6655 8488 2.967887 AGCAGGAAACAAGCCAAGAAAT 59.032 40.909 0.00 0.00 34.58 2.17
6656 8489 2.387757 AGCAGGAAACAAGCCAAGAAA 58.612 42.857 0.00 0.00 34.58 2.52
6657 8490 2.071778 AGCAGGAAACAAGCCAAGAA 57.928 45.000 0.00 0.00 34.58 2.52
6658 8491 1.682854 CAAGCAGGAAACAAGCCAAGA 59.317 47.619 0.00 0.00 34.58 3.02
6659 8492 1.410153 ACAAGCAGGAAACAAGCCAAG 59.590 47.619 0.00 0.00 34.58 3.61
6660 8493 1.484038 ACAAGCAGGAAACAAGCCAA 58.516 45.000 0.00 0.00 34.58 4.52
6661 8494 1.484038 AACAAGCAGGAAACAAGCCA 58.516 45.000 0.00 0.00 34.58 4.75
6662 8495 3.068165 AGTTAACAAGCAGGAAACAAGCC 59.932 43.478 8.61 0.00 34.58 4.35
6663 8496 4.307443 AGTTAACAAGCAGGAAACAAGC 57.693 40.909 8.61 0.00 0.00 4.01
6665 8498 9.906660 CAATATTAGTTAACAAGCAGGAAACAA 57.093 29.630 8.61 0.00 0.00 2.83
6666 8499 8.026607 GCAATATTAGTTAACAAGCAGGAAACA 58.973 33.333 8.61 0.00 0.00 2.83
6667 8500 7.488150 GGCAATATTAGTTAACAAGCAGGAAAC 59.512 37.037 8.61 0.00 0.00 2.78
6668 8501 7.177568 TGGCAATATTAGTTAACAAGCAGGAAA 59.822 33.333 8.61 0.00 0.00 3.13
6669 8502 6.661377 TGGCAATATTAGTTAACAAGCAGGAA 59.339 34.615 8.61 0.00 0.00 3.36
6670 8503 6.094881 GTGGCAATATTAGTTAACAAGCAGGA 59.905 38.462 8.61 0.00 0.00 3.86
6671 8504 6.265577 GTGGCAATATTAGTTAACAAGCAGG 58.734 40.000 8.61 0.00 0.00 4.85
6672 8505 6.265577 GGTGGCAATATTAGTTAACAAGCAG 58.734 40.000 8.61 0.00 0.00 4.24
6673 8506 5.126384 GGGTGGCAATATTAGTTAACAAGCA 59.874 40.000 8.61 0.00 0.00 3.91
6674 8507 5.359860 AGGGTGGCAATATTAGTTAACAAGC 59.640 40.000 8.61 0.96 0.00 4.01
6675 8508 6.238374 CGAGGGTGGCAATATTAGTTAACAAG 60.238 42.308 8.61 0.00 0.00 3.16
6676 8509 5.587043 CGAGGGTGGCAATATTAGTTAACAA 59.413 40.000 8.61 0.80 0.00 2.83
6677 8510 5.120399 CGAGGGTGGCAATATTAGTTAACA 58.880 41.667 8.61 0.00 0.00 2.41
6678 8511 4.514066 CCGAGGGTGGCAATATTAGTTAAC 59.486 45.833 0.00 0.00 0.00 2.01
6679 8512 4.710324 CCGAGGGTGGCAATATTAGTTAA 58.290 43.478 0.00 0.00 0.00 2.01
6680 8513 4.345859 CCGAGGGTGGCAATATTAGTTA 57.654 45.455 0.00 0.00 0.00 2.24
6681 8514 3.208747 CCGAGGGTGGCAATATTAGTT 57.791 47.619 0.00 0.00 0.00 2.24
6682 8515 2.930826 CCGAGGGTGGCAATATTAGT 57.069 50.000 0.00 0.00 0.00 2.24
6692 8525 1.762708 ATTATGTTTGCCGAGGGTGG 58.237 50.000 0.00 0.00 0.00 4.61
6693 8526 3.510719 CAAATTATGTTTGCCGAGGGTG 58.489 45.455 0.00 0.00 0.00 4.61
6694 8527 2.094234 GCAAATTATGTTTGCCGAGGGT 60.094 45.455 15.56 0.00 46.51 4.34
6695 8528 2.539476 GCAAATTATGTTTGCCGAGGG 58.461 47.619 15.56 0.00 46.51 4.30
6702 8535 9.332301 GATGTTTTTCATGGCAAATTATGTTTG 57.668 29.630 0.00 2.12 36.83 2.93
6703 8536 8.513774 GGATGTTTTTCATGGCAAATTATGTTT 58.486 29.630 0.00 0.00 36.83 2.83
6704 8537 7.664731 TGGATGTTTTTCATGGCAAATTATGTT 59.335 29.630 0.00 0.00 36.83 2.71
6705 8538 7.166851 TGGATGTTTTTCATGGCAAATTATGT 58.833 30.769 0.00 0.00 36.83 2.29
6706 8539 7.612668 TGGATGTTTTTCATGGCAAATTATG 57.387 32.000 0.00 0.00 36.83 1.90
6707 8540 8.810990 ATTGGATGTTTTTCATGGCAAATTAT 57.189 26.923 0.00 0.00 36.83 1.28
6708 8541 8.632906 AATTGGATGTTTTTCATGGCAAATTA 57.367 26.923 0.00 0.00 36.83 1.40
6709 8542 7.527568 AATTGGATGTTTTTCATGGCAAATT 57.472 28.000 0.00 0.00 36.83 1.82
6710 8543 7.527568 AAATTGGATGTTTTTCATGGCAAAT 57.472 28.000 0.00 0.00 36.83 2.32
6711 8544 6.956202 AAATTGGATGTTTTTCATGGCAAA 57.044 29.167 0.00 0.00 36.83 3.68
6712 8545 6.429385 GGTAAATTGGATGTTTTTCATGGCAA 59.571 34.615 0.00 0.00 36.83 4.52
6713 8546 5.936956 GGTAAATTGGATGTTTTTCATGGCA 59.063 36.000 0.00 0.00 36.83 4.92
6714 8547 5.936956 TGGTAAATTGGATGTTTTTCATGGC 59.063 36.000 0.00 0.00 36.83 4.40
6715 8548 7.066043 CCATGGTAAATTGGATGTTTTTCATGG 59.934 37.037 2.57 0.00 39.10 3.66
6716 8549 7.414319 GCCATGGTAAATTGGATGTTTTTCATG 60.414 37.037 14.67 0.00 36.83 3.07
6717 8550 6.598850 GCCATGGTAAATTGGATGTTTTTCAT 59.401 34.615 14.67 0.00 39.77 2.57
6718 8551 5.936956 GCCATGGTAAATTGGATGTTTTTCA 59.063 36.000 14.67 0.00 34.81 2.69
6719 8552 6.172630 AGCCATGGTAAATTGGATGTTTTTC 58.827 36.000 14.67 0.00 34.81 2.29
6720 8553 6.125589 AGCCATGGTAAATTGGATGTTTTT 57.874 33.333 14.67 0.00 34.81 1.94
6721 8554 5.760484 AGCCATGGTAAATTGGATGTTTT 57.240 34.783 14.67 0.00 34.81 2.43
6722 8555 6.865834 TTAGCCATGGTAAATTGGATGTTT 57.134 33.333 14.67 0.00 34.81 2.83
6723 8556 6.865834 TTTAGCCATGGTAAATTGGATGTT 57.134 33.333 14.67 0.00 34.81 2.71
6724 8557 6.865834 TTTTAGCCATGGTAAATTGGATGT 57.134 33.333 14.67 0.00 35.81 3.06
6725 8558 6.538381 GGTTTTTAGCCATGGTAAATTGGATG 59.462 38.462 14.67 0.00 35.81 3.51
6726 8559 6.443527 AGGTTTTTAGCCATGGTAAATTGGAT 59.556 34.615 14.67 0.00 35.81 3.41
6727 8560 5.782845 AGGTTTTTAGCCATGGTAAATTGGA 59.217 36.000 14.67 0.19 35.81 3.53
6728 8561 5.874261 CAGGTTTTTAGCCATGGTAAATTGG 59.126 40.000 14.67 3.05 35.81 3.16
6729 8562 6.589907 GTCAGGTTTTTAGCCATGGTAAATTG 59.410 38.462 14.67 11.01 35.81 2.32
6730 8563 6.571537 CGTCAGGTTTTTAGCCATGGTAAATT 60.572 38.462 14.67 0.00 35.81 1.82
6731 8564 5.105917 CGTCAGGTTTTTAGCCATGGTAAAT 60.106 40.000 14.67 0.00 35.81 1.40
6732 8565 4.216687 CGTCAGGTTTTTAGCCATGGTAAA 59.783 41.667 14.67 13.40 34.38 2.01
6733 8566 3.754323 CGTCAGGTTTTTAGCCATGGTAA 59.246 43.478 14.67 8.05 0.00 2.85
6734 8567 3.008157 TCGTCAGGTTTTTAGCCATGGTA 59.992 43.478 14.67 1.63 0.00 3.25
6735 8568 2.159382 CGTCAGGTTTTTAGCCATGGT 58.841 47.619 14.67 2.69 0.00 3.55
6736 8569 2.161609 GTCGTCAGGTTTTTAGCCATGG 59.838 50.000 7.63 7.63 0.00 3.66
6737 8570 3.074412 AGTCGTCAGGTTTTTAGCCATG 58.926 45.455 0.00 0.00 0.00 3.66
6738 8571 3.418684 AGTCGTCAGGTTTTTAGCCAT 57.581 42.857 0.00 0.00 0.00 4.40
6739 8572 2.922740 AGTCGTCAGGTTTTTAGCCA 57.077 45.000 0.00 0.00 0.00 4.75
6740 8573 3.058432 GGAAAGTCGTCAGGTTTTTAGCC 60.058 47.826 0.00 0.00 0.00 3.93
6741 8574 3.813724 AGGAAAGTCGTCAGGTTTTTAGC 59.186 43.478 0.00 0.00 0.00 3.09
6742 8575 4.814771 ACAGGAAAGTCGTCAGGTTTTTAG 59.185 41.667 0.00 0.00 0.00 1.85
6743 8576 4.773013 ACAGGAAAGTCGTCAGGTTTTTA 58.227 39.130 0.00 0.00 0.00 1.52
6744 8577 3.617284 ACAGGAAAGTCGTCAGGTTTTT 58.383 40.909 0.00 0.00 0.00 1.94
6745 8578 3.277142 ACAGGAAAGTCGTCAGGTTTT 57.723 42.857 0.00 0.00 0.00 2.43
6746 8579 3.203716 GAACAGGAAAGTCGTCAGGTTT 58.796 45.455 0.00 0.00 0.00 3.27
6747 8580 2.484947 GGAACAGGAAAGTCGTCAGGTT 60.485 50.000 0.00 0.00 0.00 3.50
6748 8581 1.070289 GGAACAGGAAAGTCGTCAGGT 59.930 52.381 0.00 0.00 0.00 4.00
6749 8582 1.070134 TGGAACAGGAAAGTCGTCAGG 59.930 52.381 0.00 0.00 0.00 3.86
6750 8583 2.526304 TGGAACAGGAAAGTCGTCAG 57.474 50.000 0.00 0.00 0.00 3.51
6764 8597 8.451908 ACCTTGCTCAATATAGTAAATGGAAC 57.548 34.615 0.00 0.00 0.00 3.62
6765 8598 8.902806 CAACCTTGCTCAATATAGTAAATGGAA 58.097 33.333 0.00 0.00 0.00 3.53
6766 8599 7.502226 CCAACCTTGCTCAATATAGTAAATGGA 59.498 37.037 0.00 0.00 29.05 3.41
6767 8600 7.651808 CCAACCTTGCTCAATATAGTAAATGG 58.348 38.462 0.00 0.00 0.00 3.16
6768 8601 7.141363 GCCAACCTTGCTCAATATAGTAAATG 58.859 38.462 0.00 0.00 0.00 2.32
6769 8602 6.833416 TGCCAACCTTGCTCAATATAGTAAAT 59.167 34.615 0.00 0.00 0.00 1.40
6770 8603 6.184068 TGCCAACCTTGCTCAATATAGTAAA 58.816 36.000 0.00 0.00 0.00 2.01
6771 8604 5.750524 TGCCAACCTTGCTCAATATAGTAA 58.249 37.500 0.00 0.00 0.00 2.24
6772 8605 5.366482 TGCCAACCTTGCTCAATATAGTA 57.634 39.130 0.00 0.00 0.00 1.82
6773 8606 4.235079 TGCCAACCTTGCTCAATATAGT 57.765 40.909 0.00 0.00 0.00 2.12
6774 8607 5.779529 ATTGCCAACCTTGCTCAATATAG 57.220 39.130 0.00 0.00 32.24 1.31
6775 8608 5.421693 ACAATTGCCAACCTTGCTCAATATA 59.578 36.000 5.05 0.00 33.04 0.86
6776 8609 4.223477 ACAATTGCCAACCTTGCTCAATAT 59.777 37.500 5.05 0.00 33.04 1.28
6777 8610 3.577848 ACAATTGCCAACCTTGCTCAATA 59.422 39.130 5.05 0.00 33.04 1.90
6778 8611 2.369532 ACAATTGCCAACCTTGCTCAAT 59.630 40.909 5.05 0.00 34.01 2.57
6779 8612 1.761784 ACAATTGCCAACCTTGCTCAA 59.238 42.857 5.05 0.00 0.00 3.02
6780 8613 1.412079 ACAATTGCCAACCTTGCTCA 58.588 45.000 5.05 0.00 0.00 4.26
6781 8614 2.531522 AACAATTGCCAACCTTGCTC 57.468 45.000 5.05 0.00 0.00 4.26
6782 8615 2.299867 CCTAACAATTGCCAACCTTGCT 59.700 45.455 5.05 0.00 0.00 3.91
6783 8616 2.298729 TCCTAACAATTGCCAACCTTGC 59.701 45.455 5.05 0.00 0.00 4.01
6784 8617 3.611530 CGTCCTAACAATTGCCAACCTTG 60.612 47.826 5.05 0.00 0.00 3.61
6785 8618 2.556622 CGTCCTAACAATTGCCAACCTT 59.443 45.455 5.05 0.00 0.00 3.50
6786 8619 2.159382 CGTCCTAACAATTGCCAACCT 58.841 47.619 5.05 0.00 0.00 3.50
6787 8620 1.201414 CCGTCCTAACAATTGCCAACC 59.799 52.381 5.05 0.00 0.00 3.77
6788 8621 1.402325 GCCGTCCTAACAATTGCCAAC 60.402 52.381 5.05 0.00 0.00 3.77
6789 8622 0.885196 GCCGTCCTAACAATTGCCAA 59.115 50.000 5.05 0.00 0.00 4.52
6790 8623 1.302383 CGCCGTCCTAACAATTGCCA 61.302 55.000 5.05 0.00 0.00 4.92
6791 8624 1.427819 CGCCGTCCTAACAATTGCC 59.572 57.895 5.05 0.00 0.00 4.52
6792 8625 1.303091 ACCGCCGTCCTAACAATTGC 61.303 55.000 5.05 0.00 0.00 3.56
6793 8626 0.725117 GACCGCCGTCCTAACAATTG 59.275 55.000 3.24 3.24 32.40 2.32
6794 8627 0.322322 TGACCGCCGTCCTAACAATT 59.678 50.000 2.66 0.00 38.32 2.32
6795 8628 0.539986 ATGACCGCCGTCCTAACAAT 59.460 50.000 2.66 0.00 38.32 2.71
6796 8629 1.184431 TATGACCGCCGTCCTAACAA 58.816 50.000 2.66 0.00 38.32 2.83
6797 8630 1.184431 TTATGACCGCCGTCCTAACA 58.816 50.000 2.66 0.00 38.32 2.41
6798 8631 2.132762 CATTATGACCGCCGTCCTAAC 58.867 52.381 2.66 0.00 38.32 2.34
6799 8632 1.758280 ACATTATGACCGCCGTCCTAA 59.242 47.619 0.00 4.36 38.32 2.69
6800 8633 1.338973 GACATTATGACCGCCGTCCTA 59.661 52.381 0.00 0.00 38.32 2.94
6801 8634 0.104304 GACATTATGACCGCCGTCCT 59.896 55.000 0.00 0.00 38.32 3.85
6802 8635 0.179094 TGACATTATGACCGCCGTCC 60.179 55.000 0.00 0.00 38.32 4.79
6803 8636 1.209128 CTGACATTATGACCGCCGTC 58.791 55.000 0.00 0.00 39.66 4.79
6804 8637 0.179084 CCTGACATTATGACCGCCGT 60.179 55.000 0.00 0.00 0.00 5.68
6805 8638 0.104120 TCCTGACATTATGACCGCCG 59.896 55.000 0.00 0.00 0.00 6.46
6806 8639 2.224281 TGATCCTGACATTATGACCGCC 60.224 50.000 0.00 0.00 0.00 6.13
6807 8640 3.111853 TGATCCTGACATTATGACCGC 57.888 47.619 0.00 0.00 0.00 5.68
6808 8641 4.083643 GCAATGATCCTGACATTATGACCG 60.084 45.833 0.00 0.00 36.40 4.79
6809 8642 5.068636 AGCAATGATCCTGACATTATGACC 58.931 41.667 0.00 0.00 36.40 4.02
6810 8643 7.658982 TCTTAGCAATGATCCTGACATTATGAC 59.341 37.037 0.00 0.00 36.40 3.06
6811 8644 7.738847 TCTTAGCAATGATCCTGACATTATGA 58.261 34.615 0.00 0.00 36.40 2.15
6812 8645 7.974482 TCTTAGCAATGATCCTGACATTATG 57.026 36.000 0.00 0.00 36.40 1.90
6813 8646 8.380867 TGATCTTAGCAATGATCCTGACATTAT 58.619 33.333 9.33 0.00 38.53 1.28
6814 8647 7.738847 TGATCTTAGCAATGATCCTGACATTA 58.261 34.615 9.33 0.00 38.53 1.90
6815 8648 6.598503 TGATCTTAGCAATGATCCTGACATT 58.401 36.000 9.33 0.00 38.53 2.71
6816 8649 6.183810 TGATCTTAGCAATGATCCTGACAT 57.816 37.500 9.33 0.00 38.53 3.06
6817 8650 5.619132 TGATCTTAGCAATGATCCTGACA 57.381 39.130 9.33 0.00 38.53 3.58
6818 8651 6.935771 AGAATGATCTTAGCAATGATCCTGAC 59.064 38.462 9.33 0.00 38.53 3.51
6819 8652 7.075851 AGAATGATCTTAGCAATGATCCTGA 57.924 36.000 9.33 0.00 38.53 3.86
6820 8653 7.549842 CCTAGAATGATCTTAGCAATGATCCTG 59.450 40.741 9.33 0.00 38.53 3.86
6821 8654 7.457218 TCCTAGAATGATCTTAGCAATGATCCT 59.543 37.037 9.33 4.10 38.53 3.24
6822 8655 7.619050 TCCTAGAATGATCTTAGCAATGATCC 58.381 38.462 9.33 0.00 38.53 3.36
6823 8656 9.669887 AATCCTAGAATGATCTTAGCAATGATC 57.330 33.333 0.00 6.07 39.43 2.92
6825 8658 9.857656 AAAATCCTAGAATGATCTTAGCAATGA 57.142 29.630 0.00 0.00 37.10 2.57
6891 8724 5.300792 TGGTTGAGTTGAAACATAGGGAAAC 59.699 40.000 0.00 0.00 0.00 2.78
6892 8725 5.450453 TGGTTGAGTTGAAACATAGGGAAA 58.550 37.500 0.00 0.00 0.00 3.13
6893 8726 5.055265 TGGTTGAGTTGAAACATAGGGAA 57.945 39.130 0.00 0.00 0.00 3.97
6894 8727 4.715534 TGGTTGAGTTGAAACATAGGGA 57.284 40.909 0.00 0.00 0.00 4.20
6895 8728 5.782893 TTTGGTTGAGTTGAAACATAGGG 57.217 39.130 0.00 0.00 0.00 3.53
6896 8729 7.307337 GCAAATTTGGTTGAGTTGAAACATAGG 60.307 37.037 19.47 0.00 0.00 2.57
6897 8730 7.224362 TGCAAATTTGGTTGAGTTGAAACATAG 59.776 33.333 19.47 0.00 0.00 2.23
6898 8731 7.044181 TGCAAATTTGGTTGAGTTGAAACATA 58.956 30.769 19.47 0.00 0.00 2.29
6899 8732 5.879223 TGCAAATTTGGTTGAGTTGAAACAT 59.121 32.000 19.47 0.00 0.00 2.71
6900 8733 5.240891 TGCAAATTTGGTTGAGTTGAAACA 58.759 33.333 19.47 1.71 0.00 2.83
6901 8734 5.793026 TGCAAATTTGGTTGAGTTGAAAC 57.207 34.783 19.47 0.00 0.00 2.78
6902 8735 6.808008 TTTGCAAATTTGGTTGAGTTGAAA 57.192 29.167 19.47 0.00 0.00 2.69
6903 8736 6.808008 TTTTGCAAATTTGGTTGAGTTGAA 57.192 29.167 19.47 0.00 0.00 2.69
6904 8737 6.822676 AGATTTTGCAAATTTGGTTGAGTTGA 59.177 30.769 19.47 0.00 0.00 3.18
6905 8738 7.018635 AGATTTTGCAAATTTGGTTGAGTTG 57.981 32.000 19.47 0.00 0.00 3.16
6906 8739 8.203485 TCTAGATTTTGCAAATTTGGTTGAGTT 58.797 29.630 19.47 0.00 0.00 3.01
6907 8740 7.725251 TCTAGATTTTGCAAATTTGGTTGAGT 58.275 30.769 19.47 0.00 0.00 3.41
6908 8741 8.084073 TCTCTAGATTTTGCAAATTTGGTTGAG 58.916 33.333 19.47 13.73 0.00 3.02
6909 8742 7.950512 TCTCTAGATTTTGCAAATTTGGTTGA 58.049 30.769 19.47 4.92 0.00 3.18
6910 8743 8.592105 TTCTCTAGATTTTGCAAATTTGGTTG 57.408 30.769 19.47 2.62 0.00 3.77
6911 8744 9.783081 ATTTCTCTAGATTTTGCAAATTTGGTT 57.217 25.926 19.47 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.