Multiple sequence alignment - TraesCS3B01G397600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G397600 chr3B 100.000 5774 0 0 1 5774 627911988 627906215 0.000000e+00 10663.0
1 TraesCS3B01G397600 chr3A 93.538 3064 161 20 2390 5431 614762571 614759523 0.000000e+00 4527.0
2 TraesCS3B01G397600 chr3A 85.915 1569 88 56 575 2062 614764233 614762717 0.000000e+00 1550.0
3 TraesCS3B01G397600 chr3A 92.593 243 18 0 5532 5774 614759227 614758985 3.310000e-92 350.0
4 TraesCS3B01G397600 chr3A 88.768 276 22 8 37 304 614771293 614771019 4.310000e-86 329.0
5 TraesCS3B01G397600 chr3D 94.263 2876 127 19 2585 5431 472404827 472401961 0.000000e+00 4362.0
6 TraesCS3B01G397600 chr3D 86.224 1401 70 37 434 1764 472406974 472405627 0.000000e+00 1404.0
7 TraesCS3B01G397600 chr3D 92.787 305 20 2 1 304 472407906 472407603 1.910000e-119 440.0
8 TraesCS3B01G397600 chr3D 89.180 305 20 7 1764 2062 472405441 472405144 9.140000e-98 368.0
9 TraesCS3B01G397600 chr3D 86.431 339 28 10 5446 5774 472401861 472401531 7.120000e-94 355.0
10 TraesCS3B01G397600 chr3D 84.906 106 15 1 2163 2267 583290883 583290778 7.910000e-19 106.0
11 TraesCS3B01G397600 chr6A 84.049 163 22 1 2076 2238 101760761 101760603 2.790000e-33 154.0
12 TraesCS3B01G397600 chr5B 81.283 187 25 7 2079 2259 472674721 472674539 6.030000e-30 143.0
13 TraesCS3B01G397600 chr5B 87.912 91 11 0 2172 2262 266982238 266982148 2.200000e-19 108.0
14 TraesCS3B01G397600 chr2A 91.753 97 8 0 2079 2175 656365296 656365200 1.010000e-27 135.0
15 TraesCS3B01G397600 chr2A 87.000 100 11 2 2172 2270 25326867 25326769 1.700000e-20 111.0
16 TraesCS3B01G397600 chr1B 91.753 97 8 0 2079 2175 643155993 643156089 1.010000e-27 135.0
17 TraesCS3B01G397600 chr1A 91.753 97 8 0 2079 2175 435066021 435066117 1.010000e-27 135.0
18 TraesCS3B01G397600 chr1A 90.196 102 9 1 2076 2176 574192145 574192246 1.310000e-26 132.0
19 TraesCS3B01G397600 chr7B 91.667 96 8 0 2080 2175 48123741 48123646 3.630000e-27 134.0
20 TraesCS3B01G397600 chr7B 82.105 95 17 0 2162 2256 310555489 310555583 1.330000e-11 82.4
21 TraesCS3B01G397600 chr7A 90.909 99 9 0 2077 2175 593450831 593450733 3.630000e-27 134.0
22 TraesCS3B01G397600 chr7A 89.773 88 9 0 2172 2259 276146116 276146029 4.730000e-21 113.0
23 TraesCS3B01G397600 chr4D 90.000 100 10 0 2076 2175 36413365 36413266 4.700000e-26 130.0
24 TraesCS3B01G397600 chrUn 87.912 91 11 0 2172 2262 66416496 66416406 2.200000e-19 108.0
25 TraesCS3B01G397600 chr5A 89.412 85 9 0 2172 2256 603991071 603991155 2.200000e-19 108.0
26 TraesCS3B01G397600 chr2D 87.368 95 10 2 2172 2265 344031542 344031449 2.200000e-19 108.0
27 TraesCS3B01G397600 chr5D 82.243 107 18 1 2162 2267 504792253 504792359 2.220000e-14 91.6
28 TraesCS3B01G397600 chr5D 80.734 109 16 4 2148 2254 113384613 113384718 4.800000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G397600 chr3B 627906215 627911988 5773 True 10663.000000 10663 100.000 1 5774 1 chr3B.!!$R1 5773
1 TraesCS3B01G397600 chr3A 614758985 614764233 5248 True 2142.333333 4527 90.682 575 5774 3 chr3A.!!$R2 5199
2 TraesCS3B01G397600 chr3D 472401531 472407906 6375 True 1385.800000 4362 89.777 1 5774 5 chr3D.!!$R2 5773

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
969 1540 0.034616 ATCAGGCTCCTATTCGCAGC 59.965 55.000 0.00 0.0 0.00 5.25 F
2338 3201 0.107897 CACACATACAAGCCCCGCTA 60.108 55.000 0.00 0.0 38.25 4.26 F
2360 3223 0.033504 AACGCACGGCATAGGATAGG 59.966 55.000 0.00 0.0 0.00 2.57 F
3316 4189 0.248621 GCGATATGGTTGCAGTTGCC 60.249 55.000 1.06 0.0 41.18 4.52 F
4173 5046 1.004440 GCGACTTCAAGGAGGCTGT 60.004 57.895 0.00 0.0 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2341 3204 0.033504 CCTATCCTATGCCGTGCGTT 59.966 55.0 0.00 0.0 0.0 4.84 R
4212 5085 0.315251 TCGCGGAAGGATAGCTCATG 59.685 55.0 6.13 0.0 0.0 3.07 R
4216 5089 1.381928 TTCGTCGCGGAAGGATAGCT 61.382 55.0 6.13 0.0 0.0 3.32 R
4395 5268 0.036010 AAACATCACTCTGGAGGGCG 60.036 55.0 2.58 0.0 0.0 6.13 R
5620 6719 0.250209 AGTGGTGCAGCAGAAGTGAG 60.250 55.0 20.85 0.0 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.031157 CCAAGGTTCGTGCTACAAAAGG 60.031 50.000 0.00 0.00 0.00 3.11
34 35 3.756933 AGGTTCGTGCTACAAAAGGTA 57.243 42.857 0.00 0.00 0.00 3.08
56 57 9.017509 AGGTATAAATTGCATCTTGATATGGTG 57.982 33.333 0.00 0.00 0.00 4.17
57 58 7.756722 GGTATAAATTGCATCTTGATATGGTGC 59.243 37.037 0.00 0.00 36.39 5.01
73 74 1.891919 TGCTGACGCACCAAGGTTC 60.892 57.895 0.00 0.00 42.25 3.62
77 78 2.699954 CTGACGCACCAAGGTTCTAAT 58.300 47.619 0.00 0.00 0.00 1.73
78 79 3.074412 CTGACGCACCAAGGTTCTAATT 58.926 45.455 0.00 0.00 0.00 1.40
105 106 5.781210 TGGTTATTTGACATGCAGAACAA 57.219 34.783 0.00 0.00 0.00 2.83
136 137 1.843851 CTCCCCAAGTGTAAGGGCATA 59.156 52.381 0.00 0.00 44.06 3.14
170 171 7.246674 TGACAAGACGAAATTATCTTATGCC 57.753 36.000 0.00 0.00 33.35 4.40
279 281 9.588096 ACTCCTAAATTTTTGTAGGATGAGTTT 57.412 29.630 7.69 0.00 43.88 2.66
281 283 9.581289 TCCTAAATTTTTGTAGGATGAGTTTGA 57.419 29.630 3.69 0.00 40.80 2.69
328 381 7.423199 ACAATTCTATCTATTGCATGCACTTG 58.577 34.615 22.58 16.48 36.65 3.16
343 396 7.392113 TGCATGCACTTGATATCAATATCATCA 59.608 33.333 18.46 15.23 45.99 3.07
428 481 9.783256 AACGCTAATGGTCAAATATAACTTTTC 57.217 29.630 0.00 0.00 0.00 2.29
429 482 8.952278 ACGCTAATGGTCAAATATAACTTTTCA 58.048 29.630 0.00 0.00 0.00 2.69
430 483 9.781834 CGCTAATGGTCAAATATAACTTTTCAA 57.218 29.630 0.00 0.00 0.00 2.69
473 981 6.463995 ACATCAGTTTAAACTTTTGGAGCA 57.536 33.333 18.25 0.00 37.08 4.26
475 983 6.980397 ACATCAGTTTAAACTTTTGGAGCAAG 59.020 34.615 18.25 3.66 37.08 4.01
481 989 9.922264 AGTTTAAACTTTTGGAGCAAGTGGCTG 62.922 40.741 15.22 0.00 45.49 4.85
493 1001 3.395639 CAAGTGGCTGCAACATGAATTT 58.604 40.909 10.27 0.00 0.00 1.82
506 1014 6.417635 GCAACATGAATTTTGTATGGTATCCG 59.582 38.462 0.00 0.00 0.00 4.18
509 1017 6.017109 ACATGAATTTTGTATGGTATCCGAGC 60.017 38.462 0.00 0.00 0.00 5.03
516 1024 6.474140 TTGTATGGTATCCGAGCTAAGAAA 57.526 37.500 0.00 0.00 0.00 2.52
526 1034 5.411781 TCCGAGCTAAGAAATCTTGAGTTC 58.588 41.667 5.93 3.01 37.40 3.01
532 1040 7.652727 AGCTAAGAAATCTTGAGTTCAAAACC 58.347 34.615 12.31 0.00 37.40 3.27
536 1044 5.893824 AGAAATCTTGAGTTCAAAACCCTGT 59.106 36.000 12.31 0.00 35.15 4.00
537 1045 5.774498 AATCTTGAGTTCAAAACCCTGTC 57.226 39.130 0.00 0.00 35.15 3.51
551 1059 2.271800 CCCTGTCAAACGCAGTATCTC 58.728 52.381 0.00 0.00 45.00 2.75
552 1060 2.353704 CCCTGTCAAACGCAGTATCTCA 60.354 50.000 0.00 0.00 45.00 3.27
555 1063 4.143030 CCTGTCAAACGCAGTATCTCAAAG 60.143 45.833 0.00 0.00 45.00 2.77
559 1067 4.690748 TCAAACGCAGTATCTCAAAGGAAG 59.309 41.667 0.00 0.00 45.00 3.46
561 1069 1.936547 CGCAGTATCTCAAAGGAAGCC 59.063 52.381 0.00 0.00 0.00 4.35
562 1070 2.293170 GCAGTATCTCAAAGGAAGCCC 58.707 52.381 0.00 0.00 0.00 5.19
646 1179 3.620785 GGCGAGCGAGGGATCCAT 61.621 66.667 15.23 6.26 0.00 3.41
647 1180 2.048690 GCGAGCGAGGGATCCATC 60.049 66.667 16.60 16.60 0.00 3.51
648 1181 2.653702 CGAGCGAGGGATCCATCC 59.346 66.667 20.33 12.93 46.41 3.51
690 1227 0.109319 CCCAGCGCGCAACTTTTAAT 60.109 50.000 35.10 5.73 0.00 1.40
691 1228 1.668628 CCCAGCGCGCAACTTTTAATT 60.669 47.619 35.10 4.83 0.00 1.40
692 1229 2.058057 CCAGCGCGCAACTTTTAATTT 58.942 42.857 35.10 4.19 0.00 1.82
693 1230 2.090503 CCAGCGCGCAACTTTTAATTTC 59.909 45.455 35.10 0.00 0.00 2.17
694 1231 2.090503 CAGCGCGCAACTTTTAATTTCC 59.909 45.455 35.10 0.00 0.00 3.13
695 1232 1.388768 GCGCGCAACTTTTAATTTCCC 59.611 47.619 29.10 0.00 0.00 3.97
696 1233 1.989864 CGCGCAACTTTTAATTTCCCC 59.010 47.619 8.75 0.00 0.00 4.81
697 1234 2.352323 CGCGCAACTTTTAATTTCCCCT 60.352 45.455 8.75 0.00 0.00 4.79
698 1235 3.119779 CGCGCAACTTTTAATTTCCCCTA 60.120 43.478 8.75 0.00 0.00 3.53
699 1236 4.171005 GCGCAACTTTTAATTTCCCCTAC 58.829 43.478 0.30 0.00 0.00 3.18
700 1237 4.740268 CGCAACTTTTAATTTCCCCTACC 58.260 43.478 0.00 0.00 0.00 3.18
701 1238 4.381185 CGCAACTTTTAATTTCCCCTACCC 60.381 45.833 0.00 0.00 0.00 3.69
702 1239 4.081309 GCAACTTTTAATTTCCCCTACCCC 60.081 45.833 0.00 0.00 0.00 4.95
703 1240 4.341863 ACTTTTAATTTCCCCTACCCCC 57.658 45.455 0.00 0.00 0.00 5.40
723 1260 2.186125 CTTCCGTTCCGCTACCCC 59.814 66.667 0.00 0.00 0.00 4.95
733 1270 4.208686 GCTACCCCCACGAGCTCG 62.209 72.222 33.45 33.45 46.33 5.03
735 1272 1.828660 CTACCCCCACGAGCTCGAT 60.829 63.158 40.58 22.52 43.02 3.59
738 1275 3.209812 CCCCACGAGCTCGATCGA 61.210 66.667 40.58 18.32 45.56 3.59
739 1276 2.329690 CCCACGAGCTCGATCGAG 59.670 66.667 40.58 35.25 45.56 4.04
740 1277 2.473760 CCCACGAGCTCGATCGAGT 61.474 63.158 40.58 26.97 45.56 4.18
870 1426 2.968206 GTACGGACGGAGGCTTGT 59.032 61.111 0.00 0.00 0.00 3.16
925 1481 1.525442 GTCCGATTGATTCCCGGGT 59.475 57.895 22.86 0.14 43.16 5.28
963 1534 1.821753 CCGATCGATCAGGCTCCTATT 59.178 52.381 24.40 0.00 0.00 1.73
965 1536 2.477021 CGATCGATCAGGCTCCTATTCG 60.477 54.545 24.40 4.06 33.65 3.34
967 1538 0.315251 CGATCAGGCTCCTATTCGCA 59.685 55.000 6.71 0.00 0.00 5.10
969 1540 0.034616 ATCAGGCTCCTATTCGCAGC 59.965 55.000 0.00 0.00 0.00 5.25
1440 2032 0.845768 CGCCAAGTTCGTTGCAAAAG 59.154 50.000 0.00 0.00 34.45 2.27
1442 2034 1.208259 CCAAGTTCGTTGCAAAAGGC 58.792 50.000 0.00 0.00 45.13 4.35
1503 2109 5.371115 TGCACTATAGCACTTTTGGTTTC 57.629 39.130 0.00 0.00 40.11 2.78
1574 2185 2.604629 ATGGGGCCGAAAACGGGTA 61.605 57.895 10.55 0.00 0.00 3.69
1627 2239 3.060615 CCGGGTCTTCGTCTCCGT 61.061 66.667 0.00 0.00 40.78 4.69
1628 2240 2.484203 CGGGTCTTCGTCTCCGTC 59.516 66.667 0.00 0.00 37.92 4.79
1629 2241 2.039405 CGGGTCTTCGTCTCCGTCT 61.039 63.158 0.00 0.00 37.92 4.18
1630 2242 1.801983 GGGTCTTCGTCTCCGTCTC 59.198 63.158 0.00 0.00 35.01 3.36
1631 2243 1.655885 GGGTCTTCGTCTCCGTCTCC 61.656 65.000 0.00 0.00 35.01 3.71
1632 2244 1.424635 GTCTTCGTCTCCGTCTCCG 59.575 63.158 0.00 0.00 35.01 4.63
1673 2285 3.919804 CACGCAAGAGAAGAGAAGAGAAG 59.080 47.826 0.00 0.00 43.62 2.85
1674 2286 3.823873 ACGCAAGAGAAGAGAAGAGAAGA 59.176 43.478 0.00 0.00 43.62 2.87
1675 2287 4.082787 ACGCAAGAGAAGAGAAGAGAAGAG 60.083 45.833 0.00 0.00 43.62 2.85
1676 2288 4.155826 CGCAAGAGAAGAGAAGAGAAGAGA 59.844 45.833 0.00 0.00 43.02 3.10
1677 2289 5.335583 CGCAAGAGAAGAGAAGAGAAGAGAA 60.336 44.000 0.00 0.00 43.02 2.87
1678 2290 6.625740 CGCAAGAGAAGAGAAGAGAAGAGAAT 60.626 42.308 0.00 0.00 43.02 2.40
1679 2291 7.099120 GCAAGAGAAGAGAAGAGAAGAGAATT 58.901 38.462 0.00 0.00 0.00 2.17
1680 2292 7.063780 GCAAGAGAAGAGAAGAGAAGAGAATTG 59.936 40.741 0.00 0.00 0.00 2.32
1681 2293 8.306038 CAAGAGAAGAGAAGAGAAGAGAATTGA 58.694 37.037 0.00 0.00 0.00 2.57
1682 2294 8.421249 AGAGAAGAGAAGAGAAGAGAATTGAA 57.579 34.615 0.00 0.00 0.00 2.69
1794 2611 7.009568 AGTAGACCGAGTAGTACAAAATACG 57.990 40.000 2.52 0.00 0.00 3.06
1814 2631 2.897641 CTTCGCAGCTTCGAGGGGAG 62.898 65.000 9.95 0.46 39.82 4.30
1835 2658 1.377725 GTCCCCGTCCGTGTCTCTA 60.378 63.158 0.00 0.00 0.00 2.43
1885 2708 0.460459 TTCGTTTCGTCTGTGGTGCA 60.460 50.000 0.00 0.00 0.00 4.57
1941 2764 8.073467 TGTTTCTTCCTTTTTCCTGTGTATTT 57.927 30.769 0.00 0.00 0.00 1.40
1949 2772 9.527157 TCCTTTTTCCTGTGTATTTATGATTGA 57.473 29.630 0.00 0.00 0.00 2.57
1985 2809 5.630680 CCTGTTGGAAAATTCAACTCAATCG 59.369 40.000 9.21 0.00 43.36 3.34
2032 2861 1.671979 CATGGGTGATGTCGATGCTT 58.328 50.000 0.00 0.00 0.00 3.91
2034 2863 2.602257 TGGGTGATGTCGATGCTTAG 57.398 50.000 0.00 0.00 0.00 2.18
2037 2866 2.474816 GGTGATGTCGATGCTTAGGTC 58.525 52.381 0.00 0.00 0.00 3.85
2045 2874 1.134367 CGATGCTTAGGTCGAGGTTCA 59.866 52.381 0.00 0.00 40.11 3.18
2050 2879 2.416162 GCTTAGGTCGAGGTTCACAGAG 60.416 54.545 0.00 0.00 0.00 3.35
2056 2885 3.316573 GAGGTTCACAGAGCCGGGG 62.317 68.421 2.18 0.00 37.99 5.73
2057 2886 3.319198 GGTTCACAGAGCCGGGGA 61.319 66.667 2.18 0.00 0.00 4.81
2059 2888 1.299976 GTTCACAGAGCCGGGGATT 59.700 57.895 2.18 0.00 0.00 3.01
2060 2889 0.744771 GTTCACAGAGCCGGGGATTC 60.745 60.000 2.18 0.00 0.00 2.52
2061 2890 2.202932 CACAGAGCCGGGGATTCG 60.203 66.667 2.18 0.00 0.00 3.34
2064 2893 2.042843 AGAGCCGGGGATTCGTCT 60.043 61.111 2.18 0.00 0.00 4.18
2065 2894 2.107141 GAGCCGGGGATTCGTCTG 59.893 66.667 2.18 0.00 0.00 3.51
2066 2895 3.447025 GAGCCGGGGATTCGTCTGG 62.447 68.421 2.18 0.00 0.00 3.86
2067 2896 3.467226 GCCGGGGATTCGTCTGGA 61.467 66.667 2.18 0.00 0.00 3.86
2068 2897 2.499685 CCGGGGATTCGTCTGGAC 59.500 66.667 0.00 0.00 0.00 4.02
2071 2900 1.522569 GGGGATTCGTCTGGACCAG 59.477 63.158 15.99 15.99 0.00 4.00
2072 2901 0.976073 GGGGATTCGTCTGGACCAGA 60.976 60.000 20.74 20.74 38.25 3.86
2073 2902 0.902531 GGGATTCGTCTGGACCAGAA 59.097 55.000 25.93 11.33 42.46 3.02
2074 2903 1.405661 GGGATTCGTCTGGACCAGAAC 60.406 57.143 25.93 17.63 42.46 3.01
2075 2904 1.275291 GGATTCGTCTGGACCAGAACA 59.725 52.381 25.93 12.37 42.46 3.18
2077 2906 2.992124 TTCGTCTGGACCAGAACAAA 57.008 45.000 25.93 16.32 42.46 2.83
2078 2907 2.992124 TCGTCTGGACCAGAACAAAA 57.008 45.000 25.93 7.06 42.46 2.44
2089 2952 3.655777 ACCAGAACAAAATACTCCCTCCA 59.344 43.478 0.00 0.00 0.00 3.86
2090 2953 4.292306 ACCAGAACAAAATACTCCCTCCAT 59.708 41.667 0.00 0.00 0.00 3.41
2092 2955 6.011981 ACCAGAACAAAATACTCCCTCCATTA 60.012 38.462 0.00 0.00 0.00 1.90
2093 2956 6.318900 CCAGAACAAAATACTCCCTCCATTAC 59.681 42.308 0.00 0.00 0.00 1.89
2094 2957 6.884295 CAGAACAAAATACTCCCTCCATTACA 59.116 38.462 0.00 0.00 0.00 2.41
2099 2962 9.100197 ACAAAATACTCCCTCCATTACAAAATT 57.900 29.630 0.00 0.00 0.00 1.82
2100 2963 9.586435 CAAAATACTCCCTCCATTACAAAATTC 57.414 33.333 0.00 0.00 0.00 2.17
2101 2964 9.547279 AAAATACTCCCTCCATTACAAAATTCT 57.453 29.630 0.00 0.00 0.00 2.40
2106 2969 6.552008 TCCCTCCATTACAAAATTCTTGTCT 58.448 36.000 8.61 0.00 34.11 3.41
2108 2971 8.167392 TCCCTCCATTACAAAATTCTTGTCTTA 58.833 33.333 8.61 0.29 34.11 2.10
2110 2973 9.231297 CCTCCATTACAAAATTCTTGTCTTAGA 57.769 33.333 8.61 0.00 34.11 2.10
2236 3099 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
2237 3100 8.963725 TCCGTATCTAGACAAATCTAAGACAAA 58.036 33.333 0.00 0.00 36.98 2.83
2259 3122 3.672767 TTTTTGAGACGGAGGGACTAC 57.327 47.619 0.00 0.00 41.55 2.73
2260 3123 2.297698 TTTGAGACGGAGGGACTACA 57.702 50.000 0.00 0.00 41.36 2.74
2261 3124 2.297698 TTGAGACGGAGGGACTACAA 57.702 50.000 0.00 0.00 41.36 2.41
2262 3125 1.542492 TGAGACGGAGGGACTACAAC 58.458 55.000 0.00 0.00 41.36 3.32
2264 3127 1.201880 GAGACGGAGGGACTACAACAC 59.798 57.143 0.00 0.00 41.36 3.32
2265 3128 1.203025 AGACGGAGGGACTACAACACT 60.203 52.381 0.00 0.00 41.36 3.55
2266 3129 2.040813 AGACGGAGGGACTACAACACTA 59.959 50.000 0.00 0.00 41.36 2.74
2267 3130 2.422832 GACGGAGGGACTACAACACTAG 59.577 54.545 0.00 0.00 41.36 2.57
2268 3131 1.134560 CGGAGGGACTACAACACTAGC 59.865 57.143 0.00 0.00 41.36 3.42
2269 3132 2.458620 GGAGGGACTACAACACTAGCT 58.541 52.381 0.00 0.00 40.63 3.32
2271 3134 3.119065 GGAGGGACTACAACACTAGCTTC 60.119 52.174 0.00 0.00 40.63 3.86
2272 3135 2.492484 AGGGACTACAACACTAGCTTCG 59.508 50.000 0.00 0.00 36.02 3.79
2274 3137 3.305881 GGGACTACAACACTAGCTTCGTT 60.306 47.826 0.00 0.00 0.00 3.85
2275 3138 3.673809 GGACTACAACACTAGCTTCGTTG 59.326 47.826 16.58 16.58 44.38 4.10
2276 3139 3.650139 ACTACAACACTAGCTTCGTTGG 58.350 45.455 20.18 10.39 43.38 3.77
2277 3140 1.226746 ACAACACTAGCTTCGTTGGC 58.773 50.000 20.18 0.00 43.38 4.52
2278 3141 1.225855 CAACACTAGCTTCGTTGGCA 58.774 50.000 12.39 0.00 37.07 4.92
2279 3142 1.806542 CAACACTAGCTTCGTTGGCAT 59.193 47.619 12.39 0.00 37.07 4.40
2282 3145 3.262420 ACACTAGCTTCGTTGGCATAAG 58.738 45.455 0.00 0.00 0.00 1.73
2283 3146 3.262420 CACTAGCTTCGTTGGCATAAGT 58.738 45.455 0.00 0.00 0.00 2.24
2284 3147 3.684788 CACTAGCTTCGTTGGCATAAGTT 59.315 43.478 0.00 0.00 0.00 2.66
2285 3148 4.154195 CACTAGCTTCGTTGGCATAAGTTT 59.846 41.667 0.00 0.00 0.00 2.66
2286 3149 4.760204 ACTAGCTTCGTTGGCATAAGTTTT 59.240 37.500 0.00 0.00 0.00 2.43
2287 3150 3.900941 AGCTTCGTTGGCATAAGTTTTG 58.099 40.909 0.00 0.00 0.00 2.44
2288 3151 3.568007 AGCTTCGTTGGCATAAGTTTTGA 59.432 39.130 0.00 0.00 0.00 2.69
2289 3152 4.037446 AGCTTCGTTGGCATAAGTTTTGAA 59.963 37.500 0.00 0.00 0.00 2.69
2290 3153 4.148174 GCTTCGTTGGCATAAGTTTTGAAC 59.852 41.667 0.00 0.00 0.00 3.18
2291 3154 4.902443 TCGTTGGCATAAGTTTTGAACA 57.098 36.364 0.00 0.00 0.00 3.18
2292 3155 4.602995 TCGTTGGCATAAGTTTTGAACAC 58.397 39.130 0.00 0.00 0.00 3.32
2293 3156 4.096532 TCGTTGGCATAAGTTTTGAACACA 59.903 37.500 0.00 0.00 0.00 3.72
2294 3157 4.440758 CGTTGGCATAAGTTTTGAACACAG 59.559 41.667 0.00 0.00 0.00 3.66
2295 3158 5.348164 GTTGGCATAAGTTTTGAACACAGT 58.652 37.500 0.00 0.00 0.00 3.55
2296 3159 6.500041 GTTGGCATAAGTTTTGAACACAGTA 58.500 36.000 0.00 0.00 0.00 2.74
2297 3160 6.067263 TGGCATAAGTTTTGAACACAGTAC 57.933 37.500 0.00 0.00 0.00 2.73
2298 3161 5.144359 GGCATAAGTTTTGAACACAGTACG 58.856 41.667 0.00 0.00 0.00 3.67
2299 3162 5.049954 GGCATAAGTTTTGAACACAGTACGA 60.050 40.000 0.00 0.00 0.00 3.43
2300 3163 6.348213 GGCATAAGTTTTGAACACAGTACGAT 60.348 38.462 0.00 0.00 0.00 3.73
2301 3164 6.736853 GCATAAGTTTTGAACACAGTACGATC 59.263 38.462 0.00 0.00 0.00 3.69
2302 3165 4.966850 AGTTTTGAACACAGTACGATCG 57.033 40.909 14.88 14.88 0.00 3.69
2303 3166 3.183775 AGTTTTGAACACAGTACGATCGC 59.816 43.478 16.60 0.00 0.00 4.58
2304 3167 2.425578 TTGAACACAGTACGATCGCA 57.574 45.000 16.60 0.00 0.00 5.10
2305 3168 2.425578 TGAACACAGTACGATCGCAA 57.574 45.000 16.60 0.00 0.00 4.85
2306 3169 2.745102 TGAACACAGTACGATCGCAAA 58.255 42.857 16.60 0.00 0.00 3.68
2307 3170 3.322369 TGAACACAGTACGATCGCAAAT 58.678 40.909 16.60 0.00 0.00 2.32
2308 3171 3.122780 TGAACACAGTACGATCGCAAATG 59.877 43.478 16.60 15.37 0.00 2.32
2309 3172 1.393539 ACACAGTACGATCGCAAATGC 59.606 47.619 16.60 0.00 37.78 3.56
2310 3173 1.660607 CACAGTACGATCGCAAATGCT 59.339 47.619 16.60 1.14 39.32 3.79
2311 3174 1.927174 ACAGTACGATCGCAAATGCTC 59.073 47.619 16.60 0.00 39.32 4.26
2312 3175 1.071894 CAGTACGATCGCAAATGCTCG 60.072 52.381 16.60 13.41 42.18 5.03
2313 3176 0.381909 GTACGATCGCAAATGCTCGC 60.382 55.000 16.60 0.00 40.80 5.03
2314 3177 0.527600 TACGATCGCAAATGCTCGCT 60.528 50.000 16.60 6.99 40.80 4.93
2315 3178 1.349627 CGATCGCAAATGCTCGCTT 59.650 52.632 0.26 0.00 39.32 4.68
2316 3179 0.576798 CGATCGCAAATGCTCGCTTA 59.423 50.000 0.26 0.00 39.32 3.09
2317 3180 1.654775 CGATCGCAAATGCTCGCTTAC 60.655 52.381 0.26 0.00 39.32 2.34
2318 3181 1.327460 GATCGCAAATGCTCGCTTACA 59.673 47.619 3.63 0.00 39.32 2.41
2319 3182 0.442310 TCGCAAATGCTCGCTTACAC 59.558 50.000 3.63 0.00 39.32 2.90
2320 3183 0.165727 CGCAAATGCTCGCTTACACA 59.834 50.000 3.63 0.00 39.32 3.72
2321 3184 1.606606 GCAAATGCTCGCTTACACAC 58.393 50.000 0.00 0.00 38.21 3.82
2322 3185 1.069296 GCAAATGCTCGCTTACACACA 60.069 47.619 0.00 0.00 38.21 3.72
2323 3186 2.574322 CAAATGCTCGCTTACACACAC 58.426 47.619 0.00 0.00 0.00 3.82
2324 3187 1.877637 AATGCTCGCTTACACACACA 58.122 45.000 0.00 0.00 0.00 3.72
2325 3188 2.099141 ATGCTCGCTTACACACACAT 57.901 45.000 0.00 0.00 0.00 3.21
2326 3189 2.734276 TGCTCGCTTACACACACATA 57.266 45.000 0.00 0.00 0.00 2.29
2327 3190 2.333926 TGCTCGCTTACACACACATAC 58.666 47.619 0.00 0.00 0.00 2.39
2328 3191 2.288518 TGCTCGCTTACACACACATACA 60.289 45.455 0.00 0.00 0.00 2.29
2329 3192 2.734606 GCTCGCTTACACACACATACAA 59.265 45.455 0.00 0.00 0.00 2.41
2330 3193 3.181530 GCTCGCTTACACACACATACAAG 60.182 47.826 0.00 0.00 0.00 3.16
2331 3194 2.734606 TCGCTTACACACACATACAAGC 59.265 45.455 0.00 0.00 36.03 4.01
2332 3195 2.159707 CGCTTACACACACATACAAGCC 60.160 50.000 0.00 0.00 36.00 4.35
2333 3196 2.161609 GCTTACACACACATACAAGCCC 59.838 50.000 0.00 0.00 33.87 5.19
2334 3197 2.483014 TACACACACATACAAGCCCC 57.517 50.000 0.00 0.00 0.00 5.80
2335 3198 0.605319 ACACACACATACAAGCCCCG 60.605 55.000 0.00 0.00 0.00 5.73
2336 3199 1.674322 ACACACATACAAGCCCCGC 60.674 57.895 0.00 0.00 0.00 6.13
2337 3200 1.377202 CACACATACAAGCCCCGCT 60.377 57.895 0.00 0.00 42.56 5.52
2338 3201 0.107897 CACACATACAAGCCCCGCTA 60.108 55.000 0.00 0.00 38.25 4.26
2339 3202 0.837272 ACACATACAAGCCCCGCTAT 59.163 50.000 0.00 0.00 38.25 2.97
2340 3203 1.202651 ACACATACAAGCCCCGCTATC 60.203 52.381 0.00 0.00 38.25 2.08
2341 3204 1.128200 ACATACAAGCCCCGCTATCA 58.872 50.000 0.00 0.00 38.25 2.15
2342 3205 1.488812 ACATACAAGCCCCGCTATCAA 59.511 47.619 0.00 0.00 38.25 2.57
2343 3206 1.873591 CATACAAGCCCCGCTATCAAC 59.126 52.381 0.00 0.00 38.25 3.18
2344 3207 0.179094 TACAAGCCCCGCTATCAACG 60.179 55.000 0.00 0.00 38.25 4.10
2345 3208 2.513897 AAGCCCCGCTATCAACGC 60.514 61.111 0.00 0.00 38.25 4.84
2346 3209 3.323758 AAGCCCCGCTATCAACGCA 62.324 57.895 0.00 0.00 38.25 5.24
2347 3210 3.573491 GCCCCGCTATCAACGCAC 61.573 66.667 0.00 0.00 0.00 5.34
2348 3211 3.261951 CCCCGCTATCAACGCACG 61.262 66.667 0.00 0.00 0.00 5.34
2349 3212 3.261951 CCCGCTATCAACGCACGG 61.262 66.667 0.00 0.00 43.44 4.94
2350 3213 3.925238 CCGCTATCAACGCACGGC 61.925 66.667 0.00 0.00 37.05 5.68
2351 3214 3.185365 CGCTATCAACGCACGGCA 61.185 61.111 0.00 0.00 0.00 5.69
2352 3215 2.525248 CGCTATCAACGCACGGCAT 61.525 57.895 0.00 0.00 0.00 4.40
2353 3216 1.212455 CGCTATCAACGCACGGCATA 61.212 55.000 0.00 0.00 0.00 3.14
2354 3217 0.508641 GCTATCAACGCACGGCATAG 59.491 55.000 0.00 0.00 0.00 2.23
2355 3218 1.139989 CTATCAACGCACGGCATAGG 58.860 55.000 0.00 0.00 0.00 2.57
2356 3219 0.747852 TATCAACGCACGGCATAGGA 59.252 50.000 0.00 0.00 0.00 2.94
2357 3220 0.106708 ATCAACGCACGGCATAGGAT 59.893 50.000 0.00 0.00 0.00 3.24
2358 3221 0.747852 TCAACGCACGGCATAGGATA 59.252 50.000 0.00 0.00 0.00 2.59
2359 3222 1.139989 CAACGCACGGCATAGGATAG 58.860 55.000 0.00 0.00 0.00 2.08
2360 3223 0.033504 AACGCACGGCATAGGATAGG 59.966 55.000 0.00 0.00 0.00 2.57
2361 3224 1.113517 ACGCACGGCATAGGATAGGT 61.114 55.000 0.00 0.00 0.00 3.08
2362 3225 0.033504 CGCACGGCATAGGATAGGTT 59.966 55.000 0.00 0.00 0.00 3.50
2363 3226 1.271379 CGCACGGCATAGGATAGGTTA 59.729 52.381 0.00 0.00 0.00 2.85
2364 3227 2.685100 GCACGGCATAGGATAGGTTAC 58.315 52.381 0.00 0.00 0.00 2.50
2365 3228 2.036733 GCACGGCATAGGATAGGTTACA 59.963 50.000 0.00 0.00 0.00 2.41
2366 3229 3.861131 GCACGGCATAGGATAGGTTACAG 60.861 52.174 0.00 0.00 0.00 2.74
2367 3230 3.321111 CACGGCATAGGATAGGTTACAGT 59.679 47.826 0.00 0.00 0.00 3.55
2368 3231 4.521639 CACGGCATAGGATAGGTTACAGTA 59.478 45.833 0.00 0.00 0.00 2.74
2369 3232 5.010314 CACGGCATAGGATAGGTTACAGTAA 59.990 44.000 0.00 0.00 0.00 2.24
2370 3233 5.243283 ACGGCATAGGATAGGTTACAGTAAG 59.757 44.000 0.00 0.00 0.00 2.34
2371 3234 5.336531 CGGCATAGGATAGGTTACAGTAAGG 60.337 48.000 0.00 0.00 0.00 2.69
2372 3235 5.778750 GGCATAGGATAGGTTACAGTAAGGA 59.221 44.000 0.00 0.00 0.00 3.36
2373 3236 6.269307 GGCATAGGATAGGTTACAGTAAGGAA 59.731 42.308 0.00 0.00 0.00 3.36
2374 3237 7.202066 GGCATAGGATAGGTTACAGTAAGGAAA 60.202 40.741 0.00 0.00 0.00 3.13
2375 3238 8.208903 GCATAGGATAGGTTACAGTAAGGAAAA 58.791 37.037 0.00 0.00 0.00 2.29
2376 3239 9.543783 CATAGGATAGGTTACAGTAAGGAAAAC 57.456 37.037 0.00 0.00 0.00 2.43
2377 3240 7.563724 AGGATAGGTTACAGTAAGGAAAACA 57.436 36.000 0.00 0.00 0.00 2.83
2378 3241 7.981142 AGGATAGGTTACAGTAAGGAAAACAA 58.019 34.615 0.00 0.00 0.00 2.83
2379 3242 8.612145 AGGATAGGTTACAGTAAGGAAAACAAT 58.388 33.333 0.00 0.00 0.00 2.71
2380 3243 8.674607 GGATAGGTTACAGTAAGGAAAACAATG 58.325 37.037 0.00 0.00 0.00 2.82
2381 3244 9.227777 GATAGGTTACAGTAAGGAAAACAATGT 57.772 33.333 0.00 0.00 0.00 2.71
2382 3245 7.891498 AGGTTACAGTAAGGAAAACAATGTT 57.109 32.000 0.00 0.00 0.00 2.71
2401 3264 5.389859 TGTTAAAACTGCCATGGAGATTG 57.610 39.130 18.40 2.06 0.00 2.67
2407 3270 3.552875 ACTGCCATGGAGATTGAAGATG 58.447 45.455 18.40 0.00 0.00 2.90
2424 3287 3.272574 GATGGAAATGACCAGCAGAGA 57.727 47.619 0.00 0.00 44.53 3.10
2431 3294 3.282745 GACCAGCAGAGACGCCGAA 62.283 63.158 0.00 0.00 0.00 4.30
2466 3330 3.458487 ACAAAACACTGGAGGTTCCTAGT 59.542 43.478 0.00 0.00 37.46 2.57
2467 3331 4.065789 CAAAACACTGGAGGTTCCTAGTC 58.934 47.826 0.00 0.00 37.46 2.59
2485 3349 8.135382 TCCTAGTCTTGCTTAGTCTACAAAAT 57.865 34.615 0.00 0.00 0.00 1.82
2487 3351 8.874816 CCTAGTCTTGCTTAGTCTACAAAATTC 58.125 37.037 0.00 0.00 0.00 2.17
2494 3358 8.492673 TGCTTAGTCTACAAAATTCCTACATG 57.507 34.615 0.00 0.00 0.00 3.21
2495 3359 7.552687 TGCTTAGTCTACAAAATTCCTACATGG 59.447 37.037 0.00 0.00 37.10 3.66
2500 3364 6.152831 GTCTACAAAATTCCTACATGGGCTTT 59.847 38.462 0.00 0.00 36.20 3.51
2501 3365 5.405935 ACAAAATTCCTACATGGGCTTTC 57.594 39.130 0.00 0.00 36.20 2.62
2502 3366 5.086621 ACAAAATTCCTACATGGGCTTTCT 58.913 37.500 0.00 0.00 36.20 2.52
2503 3367 6.252995 ACAAAATTCCTACATGGGCTTTCTA 58.747 36.000 0.00 0.00 36.20 2.10
2505 3369 4.713792 ATTCCTACATGGGCTTTCTAGG 57.286 45.455 0.00 0.00 36.20 3.02
2506 3370 3.414759 TCCTACATGGGCTTTCTAGGA 57.585 47.619 0.00 0.00 36.20 2.94
2515 3379 4.911390 TGGGCTTTCTAGGAAAAAGAGAG 58.089 43.478 6.59 0.00 36.09 3.20
2539 3403 2.124983 TGCTGCATTCTCTCCGGC 60.125 61.111 0.00 0.00 0.00 6.13
2695 3560 2.611971 GGACAGTATGAAACGTGGCTCA 60.612 50.000 0.00 0.00 39.69 4.26
2709 3574 2.153913 GCTCACTGCCTGTGTAACG 58.846 57.895 1.49 0.00 46.27 3.18
2769 3634 3.268330 CAGAATGGGTGTCAGTCAGATG 58.732 50.000 0.00 0.00 42.39 2.90
2828 3696 2.105128 CTGCGATCTGGACCGTCC 59.895 66.667 10.96 10.96 36.96 4.79
2880 3751 6.751425 TGCATGAAAAGTAAACACTTGTTCAG 59.249 34.615 0.00 10.47 37.25 3.02
2904 3775 7.933728 GATGATATGATCAGCTAGCTATGTG 57.066 40.000 18.86 6.10 43.53 3.21
2973 3844 2.025727 CGGCTAGCGAGGGTTACG 59.974 66.667 9.00 0.00 0.00 3.18
3105 3976 6.038382 TGAGCGTGTAAACTTGACCAAAATTA 59.962 34.615 0.00 0.00 0.00 1.40
3225 4098 7.172019 GCACATTCATGTTTTTCTTCCAGAAAT 59.828 33.333 0.00 0.00 40.27 2.17
3281 4154 9.783256 AGTAGTTCACTTACATTTGTTTGAAAC 57.217 29.630 0.14 0.14 31.59 2.78
3316 4189 0.248621 GCGATATGGTTGCAGTTGCC 60.249 55.000 1.06 0.00 41.18 4.52
3438 4311 5.977635 TCAAACTATTCCGATGACTGATGT 58.022 37.500 0.00 0.00 0.00 3.06
3565 4438 5.517054 GCTTACAGAAGGTCGAAACTCTATG 59.483 44.000 0.00 0.00 32.84 2.23
3566 4439 3.851098 ACAGAAGGTCGAAACTCTATGC 58.149 45.455 0.00 0.00 0.00 3.14
3649 4522 9.760660 GTTGACATTGTAGTTGCTTAGAAATAG 57.239 33.333 0.00 0.00 0.00 1.73
3650 4523 7.974675 TGACATTGTAGTTGCTTAGAAATAGC 58.025 34.615 0.00 0.00 39.10 2.97
3854 4727 6.369065 ACGAGGCACTAAAATACAAGAAAGAG 59.631 38.462 0.00 0.00 41.55 2.85
3933 4806 8.902540 TTATATCGCACTTCATTTAAGGTGAT 57.097 30.769 0.00 0.00 39.73 3.06
3961 4834 8.798153 GCAACTGCACATGTTTAATAAATCTAC 58.202 33.333 0.00 0.00 41.59 2.59
4137 5010 2.162681 CGGCACTGGAAAGAAAAGGAT 58.837 47.619 0.00 0.00 0.00 3.24
4173 5046 1.004440 GCGACTTCAAGGAGGCTGT 60.004 57.895 0.00 0.00 0.00 4.40
4212 5085 4.511617 AGCAGCTCTTTTTCTTAAAGCC 57.488 40.909 0.00 0.00 0.00 4.35
4216 5089 5.565439 GCAGCTCTTTTTCTTAAAGCCATGA 60.565 40.000 0.00 0.00 0.00 3.07
4228 5101 3.223661 GCCATGAGCTATCCTTCCG 57.776 57.895 0.00 0.00 38.99 4.30
4233 5106 1.370657 GAGCTATCCTTCCGCGACG 60.371 63.158 8.23 0.00 0.00 5.12
4269 5142 5.368230 TGTAGCAGGTGAAATATATGGTGGA 59.632 40.000 0.00 0.00 0.00 4.02
4275 5148 7.453393 CAGGTGAAATATATGGTGGACATAGT 58.547 38.462 0.00 0.00 44.79 2.12
4308 5181 1.321474 AGGCCGCATATCCAAATGTG 58.679 50.000 0.00 0.00 37.16 3.21
4338 5211 8.967918 ACACATTATAGTCTAGCAACAGTAGAA 58.032 33.333 0.00 0.00 0.00 2.10
4358 5231 2.486716 AGAATTAGAGCCCCTCAAGCT 58.513 47.619 0.00 0.00 45.23 3.74
4389 5262 4.333913 CAGATTAGCTGCAGTGGACTAT 57.666 45.455 16.64 0.79 37.90 2.12
4395 5268 4.065321 AGCTGCAGTGGACTATAATGTC 57.935 45.455 16.64 0.00 36.31 3.06
4470 5343 5.069781 AGCAGTACAGGGTCATAGAAGATTC 59.930 44.000 0.00 0.00 0.00 2.52
4518 5392 4.818546 CCTGACAGGTACATTCATGGAATC 59.181 45.833 13.84 0.00 28.87 2.52
4617 5496 3.259876 ACAAGCTTGACGAGGGTACAATA 59.740 43.478 32.50 0.00 0.00 1.90
4618 5497 3.802948 AGCTTGACGAGGGTACAATAG 57.197 47.619 0.00 0.00 0.00 1.73
4704 5583 1.843851 AGGTTGTCTGGTCAAAGTCCA 59.156 47.619 0.00 0.00 0.00 4.02
4717 5596 1.439543 AAGTCCAAGGCAAGAGGAGT 58.560 50.000 0.00 0.00 36.68 3.85
4743 5622 1.302907 ATGCAAATCCTCTCCCAGGT 58.697 50.000 0.00 0.00 43.95 4.00
4746 5625 1.272147 GCAAATCCTCTCCCAGGTTGT 60.272 52.381 0.00 0.00 43.95 3.32
4786 5665 3.535561 AGGATTTAGCGACATGGACTTG 58.464 45.455 0.00 0.00 0.00 3.16
4839 5718 2.789917 GCTTCGCTGCATGTGAGG 59.210 61.111 0.00 0.00 36.46 3.86
4845 5724 1.871772 GCTGCATGTGAGGTGTGAC 59.128 57.895 0.00 0.00 0.00 3.67
4873 5752 7.506261 TGGAAATAGGTAGACATCTCTTAGGAC 59.494 40.741 0.00 0.00 0.00 3.85
4920 5799 5.546621 ACTCCTAGTAAACTGACAGCAAA 57.453 39.130 1.25 0.00 0.00 3.68
4933 5812 4.002982 TGACAGCAAACATACCACAGATC 58.997 43.478 0.00 0.00 0.00 2.75
4940 5819 6.209192 AGCAAACATACCACAGATCATTTTCA 59.791 34.615 0.00 0.00 0.00 2.69
4941 5820 7.037438 GCAAACATACCACAGATCATTTTCAT 58.963 34.615 0.00 0.00 0.00 2.57
4946 5825 8.267183 ACATACCACAGATCATTTTCATGACTA 58.733 33.333 0.00 0.00 42.46 2.59
4947 5826 9.112725 CATACCACAGATCATTTTCATGACTAA 57.887 33.333 0.00 0.00 42.46 2.24
4948 5827 7.383102 ACCACAGATCATTTTCATGACTAAC 57.617 36.000 0.00 0.00 42.46 2.34
4949 5828 6.942005 ACCACAGATCATTTTCATGACTAACA 59.058 34.615 0.00 0.00 42.46 2.41
4984 5863 2.499693 TCGTTCTTGCATATGGAGGTGA 59.500 45.455 4.56 0.33 0.00 4.02
5001 5880 3.576550 AGGTGAGAAAGAGAGGTTCACTC 59.423 47.826 3.35 0.00 46.98 3.51
5017 5896 3.099905 TCACTCATTGTCCTCCGAGAAT 58.900 45.455 0.00 0.00 32.39 2.40
5022 5901 2.099141 TTGTCCTCCGAGAATTGCAG 57.901 50.000 0.00 0.00 0.00 4.41
5052 5931 6.389906 ACAAATTGCTTATTCAAGTGTAGCC 58.610 36.000 0.00 0.00 34.00 3.93
5059 5938 5.278169 GCTTATTCAAGTGTAGCCATGGATG 60.278 44.000 18.40 0.00 34.00 3.51
5110 5990 4.651503 AGAGGACATATGTACAACAGAGGG 59.348 45.833 20.30 0.00 0.00 4.30
5118 5998 4.819105 TGTACAACAGAGGGTAGGATTG 57.181 45.455 0.00 0.00 0.00 2.67
5130 6010 3.561313 GGGTAGGATTGGCAAGACAGAAA 60.561 47.826 5.96 0.00 0.00 2.52
5138 6018 1.947456 GGCAAGACAGAAAACTTCCGT 59.053 47.619 0.00 0.00 0.00 4.69
5186 6066 8.798859 ACTATGAATGTACAATCTTTGCTCTT 57.201 30.769 12.06 0.00 0.00 2.85
5252 6133 7.500720 TCAGAATGGATTTGTGTATATGCAG 57.499 36.000 0.00 0.00 36.16 4.41
5255 6136 8.501580 CAGAATGGATTTGTGTATATGCAGTAG 58.498 37.037 0.00 0.00 0.00 2.57
5281 6162 4.883083 TCAGCTACAGACCAAGTTGTAAG 58.117 43.478 1.45 0.00 30.06 2.34
5282 6163 4.344102 TCAGCTACAGACCAAGTTGTAAGT 59.656 41.667 1.45 0.00 30.06 2.24
5299 6180 7.230510 AGTTGTAAGTGGCAAGTGATGAATAAA 59.769 33.333 0.00 0.00 0.00 1.40
5326 6223 9.941325 AAAAATAGCCATGTTCATTTGATGTAA 57.059 25.926 0.00 0.00 0.00 2.41
5332 6229 9.537192 AGCCATGTTCATTTGATGTAATATTTG 57.463 29.630 0.00 0.00 0.00 2.32
5344 6241 7.642669 TGATGTAATATTTGCTTTAGCTGCTC 58.357 34.615 4.91 0.00 42.66 4.26
5357 6254 3.505464 AGCTGCTCTTGAAATGATTGC 57.495 42.857 0.00 0.00 0.00 3.56
5418 6315 6.801539 TTTCAGGTAGTTCTGTGCATTAAG 57.198 37.500 0.00 0.00 36.25 1.85
5419 6316 5.738619 TCAGGTAGTTCTGTGCATTAAGA 57.261 39.130 0.00 0.00 36.25 2.10
5421 6318 6.341316 TCAGGTAGTTCTGTGCATTAAGATC 58.659 40.000 0.00 0.00 36.25 2.75
5422 6319 6.155221 TCAGGTAGTTCTGTGCATTAAGATCT 59.845 38.462 0.00 1.45 36.25 2.75
5442 6339 9.661954 AAGATCTTATATTTCTGTACAGAGGGA 57.338 33.333 23.97 15.11 38.88 4.20
5488 6577 8.864069 ACACAATAAACAATTTTCATCGTCAA 57.136 26.923 0.00 0.00 0.00 3.18
5495 6584 7.566858 AACAATTTTCATCGTCAAGCAATAC 57.433 32.000 0.00 0.00 0.00 1.89
5505 6594 5.053811 TCGTCAAGCAATACAAGTCTTTCA 58.946 37.500 0.00 0.00 0.00 2.69
5506 6595 5.177511 TCGTCAAGCAATACAAGTCTTTCAG 59.822 40.000 0.00 0.00 0.00 3.02
5507 6596 5.050091 CGTCAAGCAATACAAGTCTTTCAGT 60.050 40.000 0.00 0.00 0.00 3.41
5508 6597 6.138761 GTCAAGCAATACAAGTCTTTCAGTG 58.861 40.000 0.00 0.00 0.00 3.66
5509 6598 5.239306 TCAAGCAATACAAGTCTTTCAGTGG 59.761 40.000 0.00 0.00 0.00 4.00
5510 6599 3.503748 AGCAATACAAGTCTTTCAGTGGC 59.496 43.478 0.00 0.00 0.00 5.01
5512 6601 3.678056 ATACAAGTCTTTCAGTGGCGA 57.322 42.857 0.00 0.00 0.00 5.54
5513 6602 2.325583 ACAAGTCTTTCAGTGGCGAA 57.674 45.000 0.00 0.00 0.00 4.70
5534 6623 7.295201 GCGAACACATTTTCATACTGAAGTTA 58.705 34.615 0.00 0.00 37.70 2.24
5535 6624 7.962918 GCGAACACATTTTCATACTGAAGTTAT 59.037 33.333 0.00 0.00 37.70 1.89
5536 6625 9.265938 CGAACACATTTTCATACTGAAGTTATG 57.734 33.333 0.00 0.00 37.70 1.90
5537 6626 9.559958 GAACACATTTTCATACTGAAGTTATGG 57.440 33.333 0.00 0.00 37.70 2.74
5538 6627 8.055279 ACACATTTTCATACTGAAGTTATGGG 57.945 34.615 0.00 8.29 37.70 4.00
5544 6643 8.561738 TTTCATACTGAAGTTATGGGAGAAAC 57.438 34.615 0.00 0.00 37.70 2.78
5597 6696 4.338379 AGACAAAGGTACCTGTCAACTC 57.662 45.455 27.21 13.05 42.17 3.01
5611 6710 7.231467 ACCTGTCAACTCTTGTGGTAAAATAT 58.769 34.615 0.00 0.00 31.94 1.28
5620 6719 8.903820 ACTCTTGTGGTAAAATATTATCCTTGC 58.096 33.333 0.00 0.00 0.00 4.01
5640 6739 0.181114 TCACTTCTGCTGCACCACTT 59.819 50.000 0.00 0.00 0.00 3.16
5648 6747 2.009051 TGCTGCACCACTTATGAATCG 58.991 47.619 0.00 0.00 0.00 3.34
5649 6748 2.009774 GCTGCACCACTTATGAATCGT 58.990 47.619 0.00 0.00 0.00 3.73
5655 6754 2.094182 ACCACTTATGAATCGTGCTCGT 60.094 45.455 8.17 0.00 38.33 4.18
5658 6757 4.026804 CCACTTATGAATCGTGCTCGTAAC 60.027 45.833 8.17 1.84 38.33 2.50
5679 6778 5.904362 ACATAAATTTCTGCCTCCTTCAC 57.096 39.130 3.63 0.00 0.00 3.18
5694 6793 5.945784 CCTCCTTCACCAGAAATGATTTACA 59.054 40.000 0.00 0.00 32.35 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.616842 ACCTTTTGTAGCACGAACCTTG 59.383 45.455 0.00 0.00 0.00 3.61
32 33 8.517878 AGCACCATATCAAGATGCAATTTATAC 58.482 33.333 0.00 0.00 38.79 1.47
34 35 7.231925 TCAGCACCATATCAAGATGCAATTTAT 59.768 33.333 0.00 0.00 38.79 1.40
56 57 0.320421 TAGAACCTTGGTGCGTCAGC 60.320 55.000 0.00 2.68 45.41 4.26
57 58 2.163818 TTAGAACCTTGGTGCGTCAG 57.836 50.000 0.00 0.00 0.00 3.51
78 79 9.183368 TGTTCTGCATGTCAAATAACCATATTA 57.817 29.630 0.00 0.00 31.44 0.98
95 96 4.712476 AGTTCTGTCTTCTTGTTCTGCAT 58.288 39.130 0.00 0.00 0.00 3.96
105 106 2.370189 CACTTGGGGAGTTCTGTCTTCT 59.630 50.000 0.00 0.00 36.10 2.85
136 137 1.133598 TCGTCTTGTCAACGACAGTGT 59.866 47.619 0.00 0.00 43.69 3.55
142 143 8.592155 CATAAGATAATTTCGTCTTGTCAACGA 58.408 33.333 9.43 0.00 46.54 3.85
170 171 0.734309 TGCTCTAAATGGCATGCACG 59.266 50.000 21.36 0.46 33.23 5.34
251 253 9.588096 ACTCATCCTACAAAAATTTAGGAGTTT 57.412 29.630 11.97 0.00 45.68 2.66
380 433 7.415206 GCGTTTTCAACTCCAAATGTATAGGAT 60.415 37.037 0.00 0.00 0.00 3.24
381 434 6.128117 GCGTTTTCAACTCCAAATGTATAGGA 60.128 38.462 0.00 0.00 0.00 2.94
383 436 6.842163 AGCGTTTTCAACTCCAAATGTATAG 58.158 36.000 0.00 0.00 0.00 1.31
384 437 6.811253 AGCGTTTTCAACTCCAAATGTATA 57.189 33.333 0.00 0.00 0.00 1.47
385 438 5.705609 AGCGTTTTCAACTCCAAATGTAT 57.294 34.783 0.00 0.00 0.00 2.29
386 439 6.621316 TTAGCGTTTTCAACTCCAAATGTA 57.379 33.333 0.00 0.00 0.00 2.29
387 440 5.508200 TTAGCGTTTTCAACTCCAAATGT 57.492 34.783 0.00 0.00 0.00 2.71
388 441 5.345741 CCATTAGCGTTTTCAACTCCAAATG 59.654 40.000 0.00 0.00 0.00 2.32
392 445 3.482436 ACCATTAGCGTTTTCAACTCCA 58.518 40.909 0.00 0.00 0.00 3.86
393 446 3.500680 TGACCATTAGCGTTTTCAACTCC 59.499 43.478 0.00 0.00 0.00 3.85
428 481 7.144722 TGTAAAGAGGCAGACAATATGTTTG 57.855 36.000 0.00 0.00 35.78 2.93
429 482 7.611467 TGATGTAAAGAGGCAGACAATATGTTT 59.389 33.333 0.00 0.00 0.00 2.83
430 483 7.112122 TGATGTAAAGAGGCAGACAATATGTT 58.888 34.615 0.00 0.00 0.00 2.71
432 485 6.765036 ACTGATGTAAAGAGGCAGACAATATG 59.235 38.462 0.00 0.00 0.00 1.78
473 981 3.756933 AAATTCATGTTGCAGCCACTT 57.243 38.095 0.00 0.00 0.00 3.16
475 983 3.132925 ACAAAATTCATGTTGCAGCCAC 58.867 40.909 0.00 0.00 0.00 5.01
481 989 6.417635 CGGATACCATACAAAATTCATGTTGC 59.582 38.462 2.57 0.00 32.27 4.17
493 1001 6.474140 TTTCTTAGCTCGGATACCATACAA 57.526 37.500 0.00 0.00 0.00 2.41
506 1014 7.805542 GGTTTTGAACTCAAGATTTCTTAGCTC 59.194 37.037 0.00 0.00 37.15 4.09
509 1017 8.078596 CAGGGTTTTGAACTCAAGATTTCTTAG 58.921 37.037 2.54 0.00 37.15 2.18
516 1024 4.792068 TGACAGGGTTTTGAACTCAAGAT 58.208 39.130 0.00 0.00 37.15 2.40
526 1034 1.134175 ACTGCGTTTGACAGGGTTTTG 59.866 47.619 0.00 0.00 39.55 2.44
532 1040 2.959516 TGAGATACTGCGTTTGACAGG 58.040 47.619 0.00 0.00 39.55 4.00
536 1044 4.265904 TCCTTTGAGATACTGCGTTTGA 57.734 40.909 0.00 0.00 0.00 2.69
537 1045 4.670221 GCTTCCTTTGAGATACTGCGTTTG 60.670 45.833 0.00 0.00 0.00 2.93
551 1059 1.007387 GTTGCGTGGGCTTCCTTTG 60.007 57.895 0.00 0.00 40.82 2.77
552 1060 1.454847 TGTTGCGTGGGCTTCCTTT 60.455 52.632 0.00 0.00 40.82 3.11
555 1063 4.025401 CGTGTTGCGTGGGCTTCC 62.025 66.667 0.00 0.00 40.82 3.46
561 1069 4.953868 TCCGGTCGTGTTGCGTGG 62.954 66.667 0.00 0.00 42.13 4.94
562 1070 2.424576 CTTTCCGGTCGTGTTGCGTG 62.425 60.000 0.00 0.00 42.13 5.34
573 1106 0.966920 ATATCGATCGCCTTTCCGGT 59.033 50.000 11.09 0.00 34.25 5.28
648 1181 4.847516 TTCGCGCCTCGGACGATG 62.848 66.667 0.00 0.00 39.05 3.84
649 1182 4.849329 GTTCGCGCCTCGGACGAT 62.849 66.667 0.00 0.00 36.89 3.73
711 1248 3.366739 CTCGTGGGGGTAGCGGAAC 62.367 68.421 0.00 0.00 0.00 3.62
716 1253 4.208686 CGAGCTCGTGGGGGTAGC 62.209 72.222 27.79 0.00 36.48 3.58
723 1260 1.010574 GACTCGATCGAGCTCGTGG 60.011 63.158 38.12 22.90 45.54 4.94
733 1270 3.938253 TCGCGGCTCGACTCGATC 61.938 66.667 6.13 0.00 43.16 3.69
854 1410 2.642254 CCACAAGCCTCCGTCCGTA 61.642 63.158 0.00 0.00 0.00 4.02
901 1457 1.227147 GAATCAATCGGACGCGGGA 60.227 57.895 12.47 4.97 0.00 5.14
1122 1705 4.324991 AACAACGCCCGGACTCCC 62.325 66.667 0.73 0.00 0.00 4.30
1125 1708 2.342648 GAGAACAACGCCCGGACT 59.657 61.111 0.73 0.00 0.00 3.85
1419 2011 2.945398 TTTGCAACGAACTTGGCGGC 62.945 55.000 0.00 0.00 0.00 6.53
1440 2032 1.067565 GCTCTGGTTTTTAGCTTGGCC 60.068 52.381 0.00 0.00 33.40 5.36
1442 2034 2.622942 TGTGCTCTGGTTTTTAGCTTGG 59.377 45.455 0.00 0.00 37.16 3.61
1470 2063 1.594397 CTATAGTGCATGCGGTGTGTG 59.406 52.381 14.09 0.00 0.00 3.82
1515 2121 2.384203 CGGAATTCGTCCCAGCTTC 58.616 57.895 0.00 0.00 44.60 3.86
1564 2175 2.346545 CGACGATTTCCTACCCGTTTTC 59.653 50.000 0.00 0.00 35.22 2.29
1632 2244 3.702555 GCACACACGCACGGAGAC 61.703 66.667 0.00 0.00 0.00 3.36
1673 2285 9.189723 CCAAGAAACTTCTCAAATTCAATTCTC 57.810 33.333 0.00 0.00 36.28 2.87
1674 2286 7.654923 GCCAAGAAACTTCTCAAATTCAATTCT 59.345 33.333 0.00 0.00 36.28 2.40
1675 2287 7.358683 CGCCAAGAAACTTCTCAAATTCAATTC 60.359 37.037 0.00 0.00 36.28 2.17
1676 2288 6.421801 CGCCAAGAAACTTCTCAAATTCAATT 59.578 34.615 0.00 0.00 36.28 2.32
1677 2289 5.922544 CGCCAAGAAACTTCTCAAATTCAAT 59.077 36.000 0.00 0.00 36.28 2.57
1678 2290 5.280945 CGCCAAGAAACTTCTCAAATTCAA 58.719 37.500 0.00 0.00 36.28 2.69
1679 2291 4.261572 CCGCCAAGAAACTTCTCAAATTCA 60.262 41.667 0.00 0.00 36.28 2.57
1680 2292 4.229876 CCGCCAAGAAACTTCTCAAATTC 58.770 43.478 0.00 0.00 36.28 2.17
1681 2293 3.005791 CCCGCCAAGAAACTTCTCAAATT 59.994 43.478 0.00 0.00 36.28 1.82
1682 2294 2.558359 CCCGCCAAGAAACTTCTCAAAT 59.442 45.455 0.00 0.00 36.28 2.32
1835 2658 2.031069 CACTCGGTATTCATCCGTCGAT 60.031 50.000 0.00 0.00 46.86 3.59
1963 2786 5.508825 CCCGATTGAGTTGAATTTTCCAACA 60.509 40.000 10.18 0.00 44.54 3.33
2032 2861 1.174783 GCTCTGTGAACCTCGACCTA 58.825 55.000 0.00 0.00 0.00 3.08
2034 2863 1.079750 GGCTCTGTGAACCTCGACC 60.080 63.158 0.00 0.00 0.00 4.79
2037 2866 2.125912 CCGGCTCTGTGAACCTCG 60.126 66.667 0.00 0.00 0.00 4.63
2045 2874 2.683933 ACGAATCCCCGGCTCTGT 60.684 61.111 0.00 0.00 0.00 3.41
2050 2879 3.467226 TCCAGACGAATCCCCGGC 61.467 66.667 0.00 0.00 37.97 6.13
2056 2885 2.743636 TGTTCTGGTCCAGACGAATC 57.256 50.000 21.73 9.95 40.46 2.52
2057 2886 3.485463 TTTGTTCTGGTCCAGACGAAT 57.515 42.857 21.73 0.00 40.46 3.34
2059 2888 2.992124 TTTTGTTCTGGTCCAGACGA 57.008 45.000 21.73 13.05 40.46 4.20
2060 2889 4.315803 AGTATTTTGTTCTGGTCCAGACG 58.684 43.478 21.73 0.00 40.46 4.18
2061 2890 4.695928 GGAGTATTTTGTTCTGGTCCAGAC 59.304 45.833 21.73 16.01 40.46 3.51
2064 2893 3.655777 AGGGAGTATTTTGTTCTGGTCCA 59.344 43.478 0.00 0.00 0.00 4.02
2065 2894 4.262617 GAGGGAGTATTTTGTTCTGGTCC 58.737 47.826 0.00 0.00 0.00 4.46
2066 2895 4.262617 GGAGGGAGTATTTTGTTCTGGTC 58.737 47.826 0.00 0.00 0.00 4.02
2067 2896 3.655777 TGGAGGGAGTATTTTGTTCTGGT 59.344 43.478 0.00 0.00 0.00 4.00
2068 2897 4.301072 TGGAGGGAGTATTTTGTTCTGG 57.699 45.455 0.00 0.00 0.00 3.86
2071 2900 7.696992 TTGTAATGGAGGGAGTATTTTGTTC 57.303 36.000 0.00 0.00 0.00 3.18
2072 2901 8.485578 TTTTGTAATGGAGGGAGTATTTTGTT 57.514 30.769 0.00 0.00 0.00 2.83
2073 2902 8.664669 ATTTTGTAATGGAGGGAGTATTTTGT 57.335 30.769 0.00 0.00 0.00 2.83
2074 2903 9.586435 GAATTTTGTAATGGAGGGAGTATTTTG 57.414 33.333 0.00 0.00 0.00 2.44
2075 2904 9.547279 AGAATTTTGTAATGGAGGGAGTATTTT 57.453 29.630 0.00 0.00 0.00 1.82
2077 2906 8.971073 CAAGAATTTTGTAATGGAGGGAGTATT 58.029 33.333 0.00 0.00 0.00 1.89
2078 2907 8.116026 ACAAGAATTTTGTAATGGAGGGAGTAT 58.884 33.333 4.77 0.00 0.00 2.12
2153 3016 8.557592 TCGTATTTGTCTAGATACGGATGTAT 57.442 34.615 18.63 0.00 46.65 2.29
2154 3017 7.967890 TCGTATTTGTCTAGATACGGATGTA 57.032 36.000 18.63 0.00 46.65 2.29
2155 3018 6.872628 TCGTATTTGTCTAGATACGGATGT 57.127 37.500 18.63 0.00 46.65 3.06
2207 3070 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
2208 3071 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
2209 3072 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
2210 3073 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
2211 3074 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
2212 3075 9.751542 ATTTGTCTTAGATTTGTCTAGATACGG 57.248 33.333 0.00 0.00 0.00 4.02
2239 3102 2.967201 TGTAGTCCCTCCGTCTCAAAAA 59.033 45.455 0.00 0.00 0.00 1.94
2243 3106 1.202964 TGTTGTAGTCCCTCCGTCTCA 60.203 52.381 0.00 0.00 0.00 3.27
2244 3107 1.201880 GTGTTGTAGTCCCTCCGTCTC 59.798 57.143 0.00 0.00 0.00 3.36
2245 3108 1.203025 AGTGTTGTAGTCCCTCCGTCT 60.203 52.381 0.00 0.00 0.00 4.18
2246 3109 1.254954 AGTGTTGTAGTCCCTCCGTC 58.745 55.000 0.00 0.00 0.00 4.79
2247 3110 2.444421 CTAGTGTTGTAGTCCCTCCGT 58.556 52.381 0.00 0.00 0.00 4.69
2256 3119 2.412089 GCCAACGAAGCTAGTGTTGTAG 59.588 50.000 18.60 9.64 40.97 2.74
2259 3122 1.225855 TGCCAACGAAGCTAGTGTTG 58.774 50.000 15.13 15.13 41.94 3.33
2260 3123 2.185004 ATGCCAACGAAGCTAGTGTT 57.815 45.000 0.00 0.00 0.00 3.32
2261 3124 3.262420 CTTATGCCAACGAAGCTAGTGT 58.738 45.455 0.00 0.00 0.00 3.55
2262 3125 3.262420 ACTTATGCCAACGAAGCTAGTG 58.738 45.455 0.00 0.00 0.00 2.74
2264 3127 4.946784 AAACTTATGCCAACGAAGCTAG 57.053 40.909 0.00 0.00 0.00 3.42
2265 3128 4.757657 TCAAAACTTATGCCAACGAAGCTA 59.242 37.500 0.00 0.00 0.00 3.32
2266 3129 3.568007 TCAAAACTTATGCCAACGAAGCT 59.432 39.130 0.00 0.00 0.00 3.74
2267 3130 3.896122 TCAAAACTTATGCCAACGAAGC 58.104 40.909 0.00 0.00 0.00 3.86
2268 3131 5.173131 GTGTTCAAAACTTATGCCAACGAAG 59.827 40.000 0.00 0.00 0.00 3.79
2269 3132 5.038033 GTGTTCAAAACTTATGCCAACGAA 58.962 37.500 0.00 0.00 0.00 3.85
2271 3134 4.355437 TGTGTTCAAAACTTATGCCAACG 58.645 39.130 0.00 0.00 0.00 4.10
2272 3135 5.348164 ACTGTGTTCAAAACTTATGCCAAC 58.652 37.500 0.00 0.00 0.00 3.77
2274 3137 5.277586 CGTACTGTGTTCAAAACTTATGCCA 60.278 40.000 0.00 0.00 0.00 4.92
2275 3138 5.049954 TCGTACTGTGTTCAAAACTTATGCC 60.050 40.000 0.00 0.00 0.00 4.40
2276 3139 5.981174 TCGTACTGTGTTCAAAACTTATGC 58.019 37.500 0.00 0.00 0.00 3.14
2277 3140 6.948228 CGATCGTACTGTGTTCAAAACTTATG 59.052 38.462 7.03 0.00 0.00 1.90
2278 3141 6.400727 GCGATCGTACTGTGTTCAAAACTTAT 60.401 38.462 17.81 0.00 0.00 1.73
2279 3142 5.107760 GCGATCGTACTGTGTTCAAAACTTA 60.108 40.000 17.81 0.00 0.00 2.24
2282 3145 3.060138 TGCGATCGTACTGTGTTCAAAAC 60.060 43.478 17.81 0.00 0.00 2.43
2283 3146 3.124560 TGCGATCGTACTGTGTTCAAAA 58.875 40.909 17.81 0.00 0.00 2.44
2284 3147 2.745102 TGCGATCGTACTGTGTTCAAA 58.255 42.857 17.81 0.00 0.00 2.69
2285 3148 2.425578 TGCGATCGTACTGTGTTCAA 57.574 45.000 17.81 0.00 0.00 2.69
2286 3149 2.425578 TTGCGATCGTACTGTGTTCA 57.574 45.000 17.81 0.00 0.00 3.18
2287 3150 3.659735 CATTTGCGATCGTACTGTGTTC 58.340 45.455 17.81 0.00 0.00 3.18
2288 3151 2.159707 GCATTTGCGATCGTACTGTGTT 60.160 45.455 17.81 0.00 0.00 3.32
2289 3152 1.393539 GCATTTGCGATCGTACTGTGT 59.606 47.619 17.81 0.00 0.00 3.72
2290 3153 2.077155 GCATTTGCGATCGTACTGTG 57.923 50.000 17.81 11.46 0.00 3.66
2302 3165 1.069296 TGTGTGTAAGCGAGCATTTGC 60.069 47.619 0.00 0.00 42.49 3.68
2303 3166 2.032117 TGTGTGTGTAAGCGAGCATTTG 60.032 45.455 0.00 0.00 0.00 2.32
2304 3167 2.217750 TGTGTGTGTAAGCGAGCATTT 58.782 42.857 0.00 0.00 0.00 2.32
2305 3168 1.877637 TGTGTGTGTAAGCGAGCATT 58.122 45.000 0.00 0.00 0.00 3.56
2306 3169 2.099141 ATGTGTGTGTAAGCGAGCAT 57.901 45.000 0.00 0.00 0.00 3.79
2307 3170 2.288518 TGTATGTGTGTGTAAGCGAGCA 60.289 45.455 0.00 0.00 0.00 4.26
2308 3171 2.333926 TGTATGTGTGTGTAAGCGAGC 58.666 47.619 0.00 0.00 0.00 5.03
2309 3172 3.181530 GCTTGTATGTGTGTGTAAGCGAG 60.182 47.826 0.00 0.00 32.41 5.03
2310 3173 2.734606 GCTTGTATGTGTGTGTAAGCGA 59.265 45.455 0.00 0.00 32.41 4.93
2311 3174 2.159707 GGCTTGTATGTGTGTGTAAGCG 60.160 50.000 0.00 0.00 40.90 4.68
2312 3175 2.161609 GGGCTTGTATGTGTGTGTAAGC 59.838 50.000 0.00 0.00 39.67 3.09
2313 3176 2.747446 GGGGCTTGTATGTGTGTGTAAG 59.253 50.000 0.00 0.00 0.00 2.34
2314 3177 2.785562 GGGGCTTGTATGTGTGTGTAA 58.214 47.619 0.00 0.00 0.00 2.41
2315 3178 1.338294 CGGGGCTTGTATGTGTGTGTA 60.338 52.381 0.00 0.00 0.00 2.90
2316 3179 0.605319 CGGGGCTTGTATGTGTGTGT 60.605 55.000 0.00 0.00 0.00 3.72
2317 3180 1.922135 GCGGGGCTTGTATGTGTGTG 61.922 60.000 0.00 0.00 0.00 3.82
2318 3181 1.674322 GCGGGGCTTGTATGTGTGT 60.674 57.895 0.00 0.00 0.00 3.72
2319 3182 0.107897 TAGCGGGGCTTGTATGTGTG 60.108 55.000 0.00 0.00 40.44 3.82
2320 3183 0.837272 ATAGCGGGGCTTGTATGTGT 59.163 50.000 0.00 0.00 40.44 3.72
2321 3184 1.202639 TGATAGCGGGGCTTGTATGTG 60.203 52.381 0.00 0.00 40.44 3.21
2322 3185 1.128200 TGATAGCGGGGCTTGTATGT 58.872 50.000 0.00 0.00 40.44 2.29
2323 3186 1.873591 GTTGATAGCGGGGCTTGTATG 59.126 52.381 0.00 0.00 40.44 2.39
2324 3187 1.540363 CGTTGATAGCGGGGCTTGTAT 60.540 52.381 0.00 0.00 40.44 2.29
2325 3188 0.179094 CGTTGATAGCGGGGCTTGTA 60.179 55.000 0.00 0.00 40.44 2.41
2326 3189 1.449601 CGTTGATAGCGGGGCTTGT 60.450 57.895 0.00 0.00 40.44 3.16
2327 3190 2.823829 GCGTTGATAGCGGGGCTTG 61.824 63.158 0.00 0.00 40.44 4.01
2328 3191 2.513897 GCGTTGATAGCGGGGCTT 60.514 61.111 0.00 0.00 40.44 4.35
2329 3192 3.781307 TGCGTTGATAGCGGGGCT 61.781 61.111 0.00 0.00 43.41 5.19
2330 3193 3.573491 GTGCGTTGATAGCGGGGC 61.573 66.667 0.00 0.00 37.44 5.80
2331 3194 3.261951 CGTGCGTTGATAGCGGGG 61.262 66.667 0.00 0.00 37.44 5.73
2332 3195 3.261951 CCGTGCGTTGATAGCGGG 61.262 66.667 0.00 0.00 38.86 6.13
2333 3196 3.925238 GCCGTGCGTTGATAGCGG 61.925 66.667 0.00 0.00 44.60 5.52
2334 3197 1.212455 TATGCCGTGCGTTGATAGCG 61.212 55.000 0.00 0.00 37.44 4.26
2335 3198 0.508641 CTATGCCGTGCGTTGATAGC 59.491 55.000 0.00 0.00 0.00 2.97
2336 3199 1.139989 CCTATGCCGTGCGTTGATAG 58.860 55.000 0.00 0.00 0.00 2.08
2337 3200 0.747852 TCCTATGCCGTGCGTTGATA 59.252 50.000 0.00 0.00 0.00 2.15
2338 3201 0.106708 ATCCTATGCCGTGCGTTGAT 59.893 50.000 0.00 0.00 0.00 2.57
2339 3202 0.747852 TATCCTATGCCGTGCGTTGA 59.252 50.000 0.00 0.00 0.00 3.18
2340 3203 1.139989 CTATCCTATGCCGTGCGTTG 58.860 55.000 0.00 0.00 0.00 4.10
2341 3204 0.033504 CCTATCCTATGCCGTGCGTT 59.966 55.000 0.00 0.00 0.00 4.84
2342 3205 1.113517 ACCTATCCTATGCCGTGCGT 61.114 55.000 0.00 0.00 0.00 5.24
2343 3206 0.033504 AACCTATCCTATGCCGTGCG 59.966 55.000 0.00 0.00 0.00 5.34
2344 3207 2.036733 TGTAACCTATCCTATGCCGTGC 59.963 50.000 0.00 0.00 0.00 5.34
2345 3208 3.321111 ACTGTAACCTATCCTATGCCGTG 59.679 47.826 0.00 0.00 0.00 4.94
2346 3209 3.573695 ACTGTAACCTATCCTATGCCGT 58.426 45.455 0.00 0.00 0.00 5.68
2347 3210 5.336531 CCTTACTGTAACCTATCCTATGCCG 60.337 48.000 0.00 0.00 0.00 5.69
2348 3211 5.778750 TCCTTACTGTAACCTATCCTATGCC 59.221 44.000 0.00 0.00 0.00 4.40
2349 3212 6.912951 TCCTTACTGTAACCTATCCTATGC 57.087 41.667 0.00 0.00 0.00 3.14
2350 3213 9.543783 GTTTTCCTTACTGTAACCTATCCTATG 57.456 37.037 0.00 0.00 0.00 2.23
2351 3214 9.275572 TGTTTTCCTTACTGTAACCTATCCTAT 57.724 33.333 0.00 0.00 0.00 2.57
2352 3215 8.669055 TGTTTTCCTTACTGTAACCTATCCTA 57.331 34.615 0.00 0.00 0.00 2.94
2353 3216 7.563724 TGTTTTCCTTACTGTAACCTATCCT 57.436 36.000 0.00 0.00 0.00 3.24
2354 3217 8.674607 CATTGTTTTCCTTACTGTAACCTATCC 58.325 37.037 0.00 0.00 0.00 2.59
2355 3218 9.227777 ACATTGTTTTCCTTACTGTAACCTATC 57.772 33.333 0.00 0.00 0.00 2.08
2356 3219 9.582648 AACATTGTTTTCCTTACTGTAACCTAT 57.417 29.630 0.00 0.00 0.00 2.57
2357 3220 8.983702 AACATTGTTTTCCTTACTGTAACCTA 57.016 30.769 0.00 0.00 0.00 3.08
2358 3221 7.891498 AACATTGTTTTCCTTACTGTAACCT 57.109 32.000 0.00 0.00 0.00 3.50
2363 3226 9.581099 CAGTTTTAACATTGTTTTCCTTACTGT 57.419 29.630 7.45 0.00 0.00 3.55
2364 3227 8.539674 GCAGTTTTAACATTGTTTTCCTTACTG 58.460 33.333 7.45 12.67 0.00 2.74
2365 3228 7.709182 GGCAGTTTTAACATTGTTTTCCTTACT 59.291 33.333 7.45 1.45 0.00 2.24
2366 3229 7.492994 TGGCAGTTTTAACATTGTTTTCCTTAC 59.507 33.333 7.45 0.00 0.00 2.34
2367 3230 7.556844 TGGCAGTTTTAACATTGTTTTCCTTA 58.443 30.769 7.45 0.00 0.00 2.69
2368 3231 6.410540 TGGCAGTTTTAACATTGTTTTCCTT 58.589 32.000 7.45 0.00 0.00 3.36
2369 3232 5.983540 TGGCAGTTTTAACATTGTTTTCCT 58.016 33.333 7.45 0.00 0.00 3.36
2370 3233 6.293353 CCATGGCAGTTTTAACATTGTTTTCC 60.293 38.462 7.45 0.00 0.00 3.13
2371 3234 6.481644 TCCATGGCAGTTTTAACATTGTTTTC 59.518 34.615 6.96 0.00 0.00 2.29
2372 3235 6.352516 TCCATGGCAGTTTTAACATTGTTTT 58.647 32.000 6.96 0.00 0.00 2.43
2373 3236 5.923204 TCCATGGCAGTTTTAACATTGTTT 58.077 33.333 6.96 0.00 0.00 2.83
2374 3237 5.304101 TCTCCATGGCAGTTTTAACATTGTT 59.696 36.000 6.96 7.30 0.00 2.83
2375 3238 4.832266 TCTCCATGGCAGTTTTAACATTGT 59.168 37.500 6.96 0.00 0.00 2.71
2376 3239 5.389859 TCTCCATGGCAGTTTTAACATTG 57.610 39.130 6.96 0.00 0.00 2.82
2377 3240 6.211184 TCAATCTCCATGGCAGTTTTAACATT 59.789 34.615 6.96 0.00 0.00 2.71
2378 3241 5.716228 TCAATCTCCATGGCAGTTTTAACAT 59.284 36.000 6.96 0.00 0.00 2.71
2379 3242 5.076182 TCAATCTCCATGGCAGTTTTAACA 58.924 37.500 6.96 0.00 0.00 2.41
2380 3243 5.643379 TCAATCTCCATGGCAGTTTTAAC 57.357 39.130 6.96 0.00 0.00 2.01
2381 3244 6.009589 TCTTCAATCTCCATGGCAGTTTTAA 58.990 36.000 6.96 4.63 0.00 1.52
2382 3245 5.569355 TCTTCAATCTCCATGGCAGTTTTA 58.431 37.500 6.96 0.00 0.00 1.52
2387 3250 2.885266 CCATCTTCAATCTCCATGGCAG 59.115 50.000 6.96 5.86 0.00 4.85
2388 3251 2.510800 TCCATCTTCAATCTCCATGGCA 59.489 45.455 6.96 0.00 34.99 4.92
2401 3264 3.614092 TCTGCTGGTCATTTCCATCTTC 58.386 45.455 0.00 0.00 36.84 2.87
2407 3270 1.363744 CGTCTCTGCTGGTCATTTCC 58.636 55.000 0.00 0.00 0.00 3.13
2431 3294 3.569701 AGTGTTTTGTTCATCCGCAGAAT 59.430 39.130 0.00 0.00 0.00 2.40
2438 3301 3.222603 ACCTCCAGTGTTTTGTTCATCC 58.777 45.455 0.00 0.00 0.00 3.51
2466 3330 8.372459 TGTAGGAATTTTGTAGACTAAGCAAGA 58.628 33.333 0.00 0.00 0.00 3.02
2467 3331 8.547967 TGTAGGAATTTTGTAGACTAAGCAAG 57.452 34.615 0.00 0.00 0.00 4.01
2485 3349 3.731431 TCCTAGAAAGCCCATGTAGGAA 58.269 45.455 4.04 0.00 39.21 3.36
2487 3351 4.503714 TTTCCTAGAAAGCCCATGTAGG 57.496 45.455 0.00 0.00 35.63 3.18
2494 3358 3.692101 GCTCTCTTTTTCCTAGAAAGCCC 59.308 47.826 0.00 0.00 31.07 5.19
2495 3359 4.394610 CAGCTCTCTTTTTCCTAGAAAGCC 59.605 45.833 0.00 0.00 36.58 4.35
2500 3364 4.221703 CACTCCAGCTCTCTTTTTCCTAGA 59.778 45.833 0.00 0.00 0.00 2.43
2501 3365 4.502962 CACTCCAGCTCTCTTTTTCCTAG 58.497 47.826 0.00 0.00 0.00 3.02
2502 3366 3.307059 GCACTCCAGCTCTCTTTTTCCTA 60.307 47.826 0.00 0.00 0.00 2.94
2503 3367 2.551938 GCACTCCAGCTCTCTTTTTCCT 60.552 50.000 0.00 0.00 0.00 3.36
2505 3369 2.483491 CAGCACTCCAGCTCTCTTTTTC 59.517 50.000 0.00 0.00 44.54 2.29
2506 3370 2.502295 CAGCACTCCAGCTCTCTTTTT 58.498 47.619 0.00 0.00 44.54 1.94
2515 3379 0.392729 AGAGAATGCAGCACTCCAGC 60.393 55.000 0.00 0.00 0.00 4.85
2575 3440 4.042062 TGATTGATGTGAGACTCCCACTTT 59.958 41.667 0.00 0.00 35.66 2.66
2695 3560 3.041940 GCGCGTTACACAGGCAGT 61.042 61.111 8.43 0.00 35.91 4.40
2769 3634 6.422776 TTTTTCTAGAGAATGAACATCGGC 57.577 37.500 0.00 0.00 33.54 5.54
2805 3673 4.212913 TCCAGATCGCAGCTCGGC 62.213 66.667 5.87 0.00 39.05 5.54
2808 3676 2.279120 CGGTCCAGATCGCAGCTC 60.279 66.667 0.00 0.00 0.00 4.09
2828 3696 7.915397 TGAAGAAAAGCTAGCTAAACAAAACTG 59.085 33.333 19.70 0.00 0.00 3.16
2866 3737 9.889128 TGATCATATCATCTGAACAAGTGTTTA 57.111 29.630 0.00 0.00 34.60 2.01
2880 3751 6.924612 CCACATAGCTAGCTGATCATATCATC 59.075 42.308 27.68 0.00 38.85 2.92
2904 3775 4.270325 GTGTTGTCAGTGAACTTCAGTACC 59.730 45.833 0.00 0.00 0.00 3.34
2973 3844 1.873572 GGCGTTCGATGCATTTGCC 60.874 57.895 0.00 6.74 41.18 4.52
3105 3976 4.640771 TGTTCCTGGAAAGAAGCATAGT 57.359 40.909 11.40 0.00 0.00 2.12
3171 4044 4.043310 ACTCCCATTCTCATCTGGTTCAAA 59.957 41.667 0.00 0.00 0.00 2.69
3172 4045 3.588842 ACTCCCATTCTCATCTGGTTCAA 59.411 43.478 0.00 0.00 0.00 2.69
3225 4098 8.982723 AGGCATCTTCAGACTCTAAATTTAGTA 58.017 33.333 21.69 10.09 32.61 1.82
3281 4154 1.342074 TCGCTTATCTGGGAGGATGG 58.658 55.000 0.00 0.00 0.00 3.51
3316 4189 1.736126 AGTGTCGCATTCATGAGCTTG 59.264 47.619 5.51 2.43 0.00 4.01
3522 4395 4.021925 GGCGGCAAGGAGTCCACT 62.022 66.667 12.86 0.00 0.00 4.00
3565 4438 2.514824 GGAAGATGGTGCCCTCGC 60.515 66.667 0.00 0.00 0.00 5.03
3566 4439 1.153289 CAGGAAGATGGTGCCCTCG 60.153 63.158 0.00 0.00 0.00 4.63
3649 4522 1.661112 GTTCAGCCATAGAACTGTCGC 59.339 52.381 0.00 0.00 41.56 5.19
3650 4523 1.920574 CGTTCAGCCATAGAACTGTCG 59.079 52.381 0.00 0.00 42.37 4.35
3779 4652 1.149148 GAGGAGCAAGACCGTTGTTC 58.851 55.000 0.00 0.00 0.00 3.18
3933 4806 3.913548 ATTAAACATGTGCAGTTGCGA 57.086 38.095 0.00 0.00 45.83 5.10
3961 4834 3.103447 TCCTCTGCAGCGAAATGATAG 57.897 47.619 9.47 0.00 0.00 2.08
4137 5010 2.764010 TCGCCTCTCCTTGCTGTTAATA 59.236 45.455 0.00 0.00 0.00 0.98
4173 5046 2.025155 GCTTCACGAGGAGTCATAGGA 58.975 52.381 0.00 0.00 0.00 2.94
4212 5085 0.315251 TCGCGGAAGGATAGCTCATG 59.685 55.000 6.13 0.00 0.00 3.07
4216 5089 1.381928 TTCGTCGCGGAAGGATAGCT 61.382 55.000 6.13 0.00 0.00 3.32
4228 5101 4.915667 TGCTACAATGTAGATATTCGTCGC 59.084 41.667 23.26 5.88 0.00 5.19
4233 5106 8.662781 TTTCACCTGCTACAATGTAGATATTC 57.337 34.615 23.26 6.34 0.00 1.75
4269 5142 5.995897 GGCCTTTAATTCGTCCATACTATGT 59.004 40.000 0.00 0.00 0.00 2.29
4275 5148 2.215196 GCGGCCTTTAATTCGTCCATA 58.785 47.619 0.00 0.00 0.00 2.74
4308 5181 7.974501 ACTGTTGCTAGACTATAATGTGTGTAC 59.025 37.037 0.00 0.00 0.00 2.90
4338 5211 2.172293 CAGCTTGAGGGGCTCTAATTCT 59.828 50.000 0.00 0.00 38.03 2.40
4358 5231 4.393834 TGCAGCTAATCTGTTTTGGTACA 58.606 39.130 0.00 0.00 44.66 2.90
4389 5262 0.824109 CACTCTGGAGGGCGACATTA 59.176 55.000 0.00 0.00 0.00 1.90
4395 5268 0.036010 AAACATCACTCTGGAGGGCG 60.036 55.000 2.58 0.00 0.00 6.13
4431 5304 2.818921 ACTGCTTTGGCCATATTTCCA 58.181 42.857 6.09 0.00 37.74 3.53
4470 5343 0.036765 TGGTTGTCCGGAATCCTTCG 60.037 55.000 5.23 0.00 36.30 3.79
4605 5484 3.195661 GTTCCAAGCTATTGTACCCTCG 58.804 50.000 0.00 0.00 34.39 4.63
4617 5496 3.971032 CTTTGAAAGTCGTTCCAAGCT 57.029 42.857 0.00 0.00 33.58 3.74
4704 5583 5.951747 TGCATAAAAATACTCCTCTTGCCTT 59.048 36.000 0.00 0.00 0.00 4.35
4717 5596 6.550854 CCTGGGAGAGGATTTGCATAAAAATA 59.449 38.462 0.00 0.00 46.33 1.40
4786 5665 1.208293 CAGTCCCCACCTCTTTAGAGC 59.792 57.143 1.09 0.00 40.75 4.09
4839 5718 5.730550 TGTCTACCTATTTCCATGTCACAC 58.269 41.667 0.00 0.00 0.00 3.82
4845 5724 8.310382 CCTAAGAGATGTCTACCTATTTCCATG 58.690 40.741 0.00 0.00 30.45 3.66
4873 5752 7.015226 TGCACTATTTGGTTTATCTCAATCG 57.985 36.000 0.00 0.00 0.00 3.34
4909 5788 3.141398 CTGTGGTATGTTTGCTGTCAGT 58.859 45.455 0.93 0.00 0.00 3.41
4920 5799 7.114754 AGTCATGAAAATGATCTGTGGTATGT 58.885 34.615 0.00 0.00 32.61 2.29
4946 5825 8.388103 GCAAGAACGAGTATTACATACATTGTT 58.612 33.333 0.00 0.00 39.87 2.83
4947 5826 7.547722 TGCAAGAACGAGTATTACATACATTGT 59.452 33.333 0.00 0.00 42.62 2.71
4948 5827 7.905126 TGCAAGAACGAGTATTACATACATTG 58.095 34.615 0.00 0.00 38.21 2.82
4949 5828 8.662781 ATGCAAGAACGAGTATTACATACATT 57.337 30.769 0.00 0.00 38.21 2.71
4957 5836 6.041637 ACCTCCATATGCAAGAACGAGTATTA 59.958 38.462 0.00 0.00 0.00 0.98
4984 5863 5.512232 GGACAATGAGTGAACCTCTCTTTCT 60.512 44.000 0.00 0.00 41.11 2.52
5001 5880 2.353889 CTGCAATTCTCGGAGGACAATG 59.646 50.000 4.96 0.00 0.00 2.82
5017 5896 7.279536 TGAATAAGCAATTTGTTGAAACTGCAA 59.720 29.630 4.07 0.00 34.35 4.08
5022 5901 8.603181 ACACTTGAATAAGCAATTTGTTGAAAC 58.397 29.630 0.00 0.00 37.43 2.78
5036 5915 5.240183 CCATCCATGGCTACACTTGAATAAG 59.760 44.000 6.96 0.00 41.75 1.73
5052 5931 3.036819 TCTCTCTGTCTTCCCATCCATG 58.963 50.000 0.00 0.00 0.00 3.66
5059 5938 3.445805 ACTCGAAATCTCTCTGTCTTCCC 59.554 47.826 0.00 0.00 0.00 3.97
5068 5947 5.587043 TCCTCTGAACTACTCGAAATCTCTC 59.413 44.000 0.00 0.00 0.00 3.20
5110 5990 4.762251 AGTTTTCTGTCTTGCCAATCCTAC 59.238 41.667 0.00 0.00 0.00 3.18
5118 5998 1.947456 ACGGAAGTTTTCTGTCTTGCC 59.053 47.619 0.00 0.00 45.92 4.52
5232 6113 8.752005 AACTACTGCATATACACAAATCCATT 57.248 30.769 0.00 0.00 0.00 3.16
5252 6133 6.210287 ACTTGGTCTGTAGCTGATAACTAC 57.790 41.667 0.00 0.00 40.37 2.73
5255 6136 5.238583 ACAACTTGGTCTGTAGCTGATAAC 58.761 41.667 0.00 0.00 0.00 1.89
5307 6188 8.277713 GCAAATATTACATCAAATGAACATGGC 58.722 33.333 0.00 0.00 0.00 4.40
5308 6189 9.537192 AGCAAATATTACATCAAATGAACATGG 57.463 29.630 0.00 0.00 0.00 3.66
5326 6223 6.764308 TTCAAGAGCAGCTAAAGCAAATAT 57.236 33.333 4.54 0.00 45.16 1.28
5328 6225 5.458041 TTTCAAGAGCAGCTAAAGCAAAT 57.542 34.783 4.54 0.00 45.16 2.32
5332 6229 4.691860 TCATTTCAAGAGCAGCTAAAGC 57.308 40.909 0.00 0.00 42.49 3.51
5397 6294 5.738619 TCTTAATGCACAGAACTACCTGA 57.261 39.130 0.00 0.00 37.59 3.86
5418 6315 9.084533 ACTCCCTCTGTACAGAAATATAAGATC 57.915 37.037 25.14 0.00 36.94 2.75
5422 6319 9.877222 TGATACTCCCTCTGTACAGAAATATAA 57.123 33.333 25.14 11.16 36.94 0.98
5429 6326 4.864483 AGTGATACTCCCTCTGTACAGA 57.136 45.455 23.80 23.80 35.85 3.41
5432 6329 5.662674 ACAAAGTGATACTCCCTCTGTAC 57.337 43.478 0.00 0.00 0.00 2.90
5434 6331 6.875972 AATACAAAGTGATACTCCCTCTGT 57.124 37.500 0.00 0.00 0.00 3.41
5435 6332 7.824289 TCAAAATACAAAGTGATACTCCCTCTG 59.176 37.037 0.00 0.00 0.00 3.35
5436 6333 7.918076 TCAAAATACAAAGTGATACTCCCTCT 58.082 34.615 0.00 0.00 0.00 3.69
5438 6335 9.614792 GTATCAAAATACAAAGTGATACTCCCT 57.385 33.333 13.00 0.00 44.81 4.20
5439 6336 9.391006 TGTATCAAAATACAAAGTGATACTCCC 57.609 33.333 18.39 0.00 46.81 4.30
5464 6445 7.946237 GCTTGACGATGAAAATTGTTTATTGTG 59.054 33.333 0.00 0.00 0.00 3.33
5473 6562 7.326789 ACTTGTATTGCTTGACGATGAAAATTG 59.673 33.333 0.00 0.00 0.00 2.32
5475 6564 6.913170 ACTTGTATTGCTTGACGATGAAAAT 58.087 32.000 0.00 0.00 0.00 1.82
5476 6565 6.204688 AGACTTGTATTGCTTGACGATGAAAA 59.795 34.615 0.00 0.00 0.00 2.29
5477 6566 5.700832 AGACTTGTATTGCTTGACGATGAAA 59.299 36.000 0.00 0.00 0.00 2.69
5478 6567 5.237815 AGACTTGTATTGCTTGACGATGAA 58.762 37.500 0.00 0.00 0.00 2.57
5479 6568 4.820897 AGACTTGTATTGCTTGACGATGA 58.179 39.130 0.00 0.00 0.00 2.92
5480 6569 5.536554 AAGACTTGTATTGCTTGACGATG 57.463 39.130 0.00 0.00 0.00 3.84
5484 6573 6.138761 CACTGAAAGACTTGTATTGCTTGAC 58.861 40.000 0.00 0.00 37.43 3.18
5488 6577 3.503748 GCCACTGAAAGACTTGTATTGCT 59.496 43.478 0.00 0.00 37.43 3.91
5495 6584 1.939934 TGTTCGCCACTGAAAGACTTG 59.060 47.619 0.00 0.00 37.43 3.16
5505 6594 4.072131 AGTATGAAAATGTGTTCGCCACT 58.928 39.130 6.61 0.00 44.81 4.00
5506 6595 4.083537 TCAGTATGAAAATGTGTTCGCCAC 60.084 41.667 0.00 0.00 45.97 5.01
5507 6596 4.068599 TCAGTATGAAAATGTGTTCGCCA 58.931 39.130 0.00 0.00 45.97 5.69
5508 6597 4.678509 TCAGTATGAAAATGTGTTCGCC 57.321 40.909 0.00 0.00 45.97 5.54
5523 6612 6.443849 TCCAGTTTCTCCCATAACTTCAGTAT 59.556 38.462 0.00 0.00 32.50 2.12
5534 6623 9.887862 ATTATTTTATCATCCAGTTTCTCCCAT 57.112 29.630 0.00 0.00 0.00 4.00
5564 6663 6.729569 AGGTACCTTTGTCTACCACTTTATCT 59.270 38.462 9.21 0.00 35.71 1.98
5571 6670 3.322828 TGACAGGTACCTTTGTCTACCAC 59.677 47.826 26.13 8.11 43.15 4.16
5597 6696 8.902806 TGAGCAAGGATAATATTTTACCACAAG 58.097 33.333 0.00 0.00 0.00 3.16
5611 6710 3.603532 CAGCAGAAGTGAGCAAGGATAA 58.396 45.455 0.00 0.00 0.00 1.75
5617 6716 1.168407 GGTGCAGCAGAAGTGAGCAA 61.168 55.000 11.86 0.00 37.79 3.91
5620 6719 0.250209 AGTGGTGCAGCAGAAGTGAG 60.250 55.000 20.85 0.00 0.00 3.51
5640 6739 7.940178 ATTTATGTTACGAGCACGATTCATA 57.060 32.000 11.40 11.70 42.66 2.15
5648 6747 5.028375 GGCAGAAATTTATGTTACGAGCAC 58.972 41.667 13.94 0.00 0.00 4.40
5649 6748 4.941263 AGGCAGAAATTTATGTTACGAGCA 59.059 37.500 13.94 0.00 0.00 4.26
5655 6754 6.377146 GGTGAAGGAGGCAGAAATTTATGTTA 59.623 38.462 13.94 0.00 0.00 2.41
5658 6757 4.706476 TGGTGAAGGAGGCAGAAATTTATG 59.294 41.667 8.46 8.46 0.00 1.90
5679 6778 6.980593 TGGTGAACTTGTAAATCATTTCTGG 58.019 36.000 0.00 0.00 0.00 3.86
5694 6793 5.241403 TCTATGTGGTGATTGGTGAACTT 57.759 39.130 0.00 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.