Multiple sequence alignment - TraesCS3B01G397100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G397100 chr3B 100.000 3654 0 0 1 3654 627614864 627611211 0.000000e+00 6748.0
1 TraesCS3B01G397100 chr3B 90.385 52 5 0 203 254 483608881 483608830 6.550000e-08 69.4
2 TraesCS3B01G397100 chr3D 93.962 3014 140 20 326 3323 471971505 471968518 0.000000e+00 4519.0
3 TraesCS3B01G397100 chr3A 92.263 2947 148 32 442 3356 614575333 614572435 0.000000e+00 4106.0
4 TraesCS3B01G397100 chr5D 96.078 51 2 0 1559 1609 255989492 255989442 2.340000e-12 84.2
5 TraesCS3B01G397100 chr6B 94.231 52 3 0 203 254 414715517 414715466 3.020000e-11 80.5
6 TraesCS3B01G397100 chr2B 94.231 52 3 0 203 254 125828058 125828007 3.020000e-11 80.5
7 TraesCS3B01G397100 chr2B 92.308 52 4 0 203 254 178528561 178528612 1.410000e-09 75.0
8 TraesCS3B01G397100 chr5A 94.118 51 3 0 1559 1609 340270060 340270010 1.090000e-10 78.7
9 TraesCS3B01G397100 chr1D 90.698 43 3 1 190 232 376862466 376862507 5.100000e-04 56.5
10 TraesCS3B01G397100 chr1A 90.698 43 3 1 190 232 477044989 477045030 5.100000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G397100 chr3B 627611211 627614864 3653 True 6748 6748 100.000 1 3654 1 chr3B.!!$R2 3653
1 TraesCS3B01G397100 chr3D 471968518 471971505 2987 True 4519 4519 93.962 326 3323 1 chr3D.!!$R1 2997
2 TraesCS3B01G397100 chr3A 614572435 614575333 2898 True 4106 4106 92.263 442 3356 1 chr3A.!!$R1 2914

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
156 157 0.034896 AACCGCACGATTTGGAGTCT 59.965 50.0 0.0 0.0 0.0 3.24 F
566 568 0.034960 GAAAAGGAGGAGAGGTGGCC 60.035 60.0 0.0 0.0 0.0 5.36 F
876 895 0.179045 CTTACGGCCCTGATTCCCTG 60.179 60.0 0.0 0.0 0.0 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1395 1418 0.038618 CGGTGATGACCACGTCTTCA 60.039 55.000 1.19 6.34 46.62 3.02 R
1957 1982 0.768622 TGTCGGTTCTCCCAACCAAT 59.231 50.000 4.46 0.00 40.28 3.16 R
2809 2834 1.808343 GTGATGCAGTGTGAATGAGCA 59.192 47.619 0.00 0.00 39.79 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.240049 GTTCGTGTCCGTCCAGAC 57.760 61.111 0.00 0.00 37.28 3.51
28 29 2.397751 GTCCAGACGCATTCATGGG 58.602 57.895 2.43 2.43 45.16 4.00
29 30 1.451927 TCCAGACGCATTCATGGGC 60.452 57.895 3.85 0.00 43.69 5.36
30 31 2.484062 CCAGACGCATTCATGGGCC 61.484 63.158 0.00 0.00 43.69 5.80
31 32 1.750018 CAGACGCATTCATGGGCCA 60.750 57.895 9.61 9.61 43.69 5.36
32 33 1.001020 AGACGCATTCATGGGCCAA 60.001 52.632 11.89 0.00 43.69 4.52
33 34 0.611618 AGACGCATTCATGGGCCAAA 60.612 50.000 11.89 0.31 43.69 3.28
34 35 0.461135 GACGCATTCATGGGCCAAAT 59.539 50.000 11.89 3.45 43.69 2.32
35 36 0.903942 ACGCATTCATGGGCCAAATT 59.096 45.000 11.89 0.00 43.69 1.82
36 37 1.278699 ACGCATTCATGGGCCAAATTT 59.721 42.857 11.89 0.00 43.69 1.82
37 38 1.666700 CGCATTCATGGGCCAAATTTG 59.333 47.619 11.89 11.40 33.92 2.32
38 39 1.402613 GCATTCATGGGCCAAATTTGC 59.597 47.619 11.89 14.50 0.00 3.68
39 40 2.942306 GCATTCATGGGCCAAATTTGCT 60.942 45.455 11.89 0.00 0.00 3.91
40 41 2.766345 TTCATGGGCCAAATTTGCTC 57.234 45.000 11.89 8.84 0.00 4.26
41 42 0.903942 TCATGGGCCAAATTTGCTCC 59.096 50.000 11.89 15.05 0.00 4.70
42 43 0.614294 CATGGGCCAAATTTGCTCCA 59.386 50.000 23.66 23.66 34.77 3.86
43 44 1.003349 CATGGGCCAAATTTGCTCCAA 59.997 47.619 24.59 16.66 34.27 3.53
44 45 1.135094 TGGGCCAAATTTGCTCCAAA 58.865 45.000 21.00 11.02 37.75 3.28
45 46 1.704070 TGGGCCAAATTTGCTCCAAAT 59.296 42.857 21.00 0.00 44.62 2.32
57 58 4.531351 CCAAATTTGGGGTCGGGT 57.469 55.556 26.87 0.00 44.70 5.28
58 59 1.971418 CCAAATTTGGGGTCGGGTG 59.029 57.895 26.87 0.39 44.70 4.61
59 60 1.540435 CCAAATTTGGGGTCGGGTGG 61.540 60.000 26.87 0.07 44.70 4.61
60 61 0.540830 CAAATTTGGGGTCGGGTGGA 60.541 55.000 10.49 0.00 0.00 4.02
61 62 0.541063 AAATTTGGGGTCGGGTGGAC 60.541 55.000 0.00 0.00 45.31 4.02
86 87 3.388841 GGACATCACCGGACCACT 58.611 61.111 9.46 0.00 0.00 4.00
87 88 1.677552 GGACATCACCGGACCACTT 59.322 57.895 9.46 0.00 0.00 3.16
88 89 0.036306 GGACATCACCGGACCACTTT 59.964 55.000 9.46 0.00 0.00 2.66
89 90 1.156736 GACATCACCGGACCACTTTG 58.843 55.000 9.46 0.00 0.00 2.77
90 91 0.472471 ACATCACCGGACCACTTTGT 59.528 50.000 9.46 0.00 0.00 2.83
91 92 1.133915 ACATCACCGGACCACTTTGTT 60.134 47.619 9.46 0.00 0.00 2.83
92 93 1.953686 CATCACCGGACCACTTTGTTT 59.046 47.619 9.46 0.00 0.00 2.83
93 94 1.384525 TCACCGGACCACTTTGTTTG 58.615 50.000 9.46 0.00 0.00 2.93
94 95 1.099689 CACCGGACCACTTTGTTTGT 58.900 50.000 9.46 0.00 0.00 2.83
95 96 1.474879 CACCGGACCACTTTGTTTGTT 59.525 47.619 9.46 0.00 0.00 2.83
96 97 2.094442 CACCGGACCACTTTGTTTGTTT 60.094 45.455 9.46 0.00 0.00 2.83
97 98 2.094442 ACCGGACCACTTTGTTTGTTTG 60.094 45.455 9.46 0.00 0.00 2.93
98 99 2.535331 CGGACCACTTTGTTTGTTTGG 58.465 47.619 0.00 0.00 0.00 3.28
99 100 2.737039 CGGACCACTTTGTTTGTTTGGG 60.737 50.000 0.00 0.00 0.00 4.12
100 101 2.235155 GGACCACTTTGTTTGTTTGGGT 59.765 45.455 0.00 0.00 0.00 4.51
101 102 3.447944 GGACCACTTTGTTTGTTTGGGTA 59.552 43.478 0.00 0.00 0.00 3.69
102 103 4.100344 GGACCACTTTGTTTGTTTGGGTAT 59.900 41.667 0.00 0.00 0.00 2.73
103 104 5.017294 ACCACTTTGTTTGTTTGGGTATG 57.983 39.130 0.00 0.00 0.00 2.39
104 105 3.807071 CCACTTTGTTTGTTTGGGTATGC 59.193 43.478 0.00 0.00 0.00 3.14
105 106 3.807071 CACTTTGTTTGTTTGGGTATGCC 59.193 43.478 0.00 0.00 0.00 4.40
106 107 3.709141 ACTTTGTTTGTTTGGGTATGCCT 59.291 39.130 0.00 0.00 34.45 4.75
107 108 3.742433 TTGTTTGTTTGGGTATGCCTG 57.258 42.857 0.00 0.00 34.45 4.85
108 109 2.672098 TGTTTGTTTGGGTATGCCTGT 58.328 42.857 0.00 0.00 34.45 4.00
109 110 3.034635 TGTTTGTTTGGGTATGCCTGTT 58.965 40.909 0.00 0.00 34.45 3.16
110 111 3.181471 TGTTTGTTTGGGTATGCCTGTTG 60.181 43.478 0.00 0.00 34.45 3.33
111 112 1.626686 TGTTTGGGTATGCCTGTTGG 58.373 50.000 0.00 0.00 34.45 3.77
112 113 0.894835 GTTTGGGTATGCCTGTTGGG 59.105 55.000 0.00 0.00 38.36 4.12
121 122 4.174305 CCTGTTGGGCCGAGTTTT 57.826 55.556 0.00 0.00 0.00 2.43
122 123 1.659794 CCTGTTGGGCCGAGTTTTG 59.340 57.895 0.00 0.00 0.00 2.44
123 124 1.659794 CTGTTGGGCCGAGTTTTGG 59.340 57.895 0.00 0.00 0.00 3.28
131 132 1.007849 CCGAGTTTTGGCCCAAACG 60.008 57.895 22.74 14.16 32.79 3.60
132 133 1.448922 CCGAGTTTTGGCCCAAACGA 61.449 55.000 22.74 0.00 32.79 3.85
133 134 0.382515 CGAGTTTTGGCCCAAACGAA 59.617 50.000 22.74 0.00 32.79 3.85
134 135 1.000717 CGAGTTTTGGCCCAAACGAAT 60.001 47.619 22.74 9.18 32.79 3.34
135 136 2.403259 GAGTTTTGGCCCAAACGAATG 58.597 47.619 22.74 0.00 32.79 2.67
136 137 2.035321 GAGTTTTGGCCCAAACGAATGA 59.965 45.455 22.74 0.00 32.79 2.57
137 138 2.432510 AGTTTTGGCCCAAACGAATGAA 59.567 40.909 22.74 0.00 32.79 2.57
138 139 3.118592 AGTTTTGGCCCAAACGAATGAAA 60.119 39.130 22.74 0.44 32.79 2.69
139 140 2.517650 TTGGCCCAAACGAATGAAAC 57.482 45.000 0.00 0.00 0.00 2.78
140 141 0.676736 TGGCCCAAACGAATGAAACC 59.323 50.000 0.00 0.00 0.00 3.27
141 142 0.388006 GGCCCAAACGAATGAAACCG 60.388 55.000 0.00 0.00 0.00 4.44
142 143 1.006825 GCCCAAACGAATGAAACCGC 61.007 55.000 0.00 0.00 0.00 5.68
143 144 0.312416 CCCAAACGAATGAAACCGCA 59.688 50.000 0.00 0.00 0.00 5.69
144 145 1.404477 CCAAACGAATGAAACCGCAC 58.596 50.000 0.00 0.00 0.00 5.34
145 146 1.041726 CAAACGAATGAAACCGCACG 58.958 50.000 0.00 0.00 0.00 5.34
146 147 0.938713 AAACGAATGAAACCGCACGA 59.061 45.000 0.00 0.00 0.00 4.35
147 148 1.153353 AACGAATGAAACCGCACGAT 58.847 45.000 0.00 0.00 0.00 3.73
148 149 1.153353 ACGAATGAAACCGCACGATT 58.847 45.000 0.00 0.00 0.00 3.34
149 150 1.533731 ACGAATGAAACCGCACGATTT 59.466 42.857 0.00 0.00 0.00 2.17
150 151 1.904412 CGAATGAAACCGCACGATTTG 59.096 47.619 0.00 0.00 0.00 2.32
151 152 2.250188 GAATGAAACCGCACGATTTGG 58.750 47.619 0.00 0.00 0.00 3.28
152 153 1.529226 ATGAAACCGCACGATTTGGA 58.471 45.000 0.00 0.00 0.00 3.53
153 154 0.871722 TGAAACCGCACGATTTGGAG 59.128 50.000 0.00 0.00 0.00 3.86
154 155 0.872388 GAAACCGCACGATTTGGAGT 59.128 50.000 0.00 0.00 0.00 3.85
155 156 0.872388 AAACCGCACGATTTGGAGTC 59.128 50.000 0.00 0.00 0.00 3.36
156 157 0.034896 AACCGCACGATTTGGAGTCT 59.965 50.000 0.00 0.00 0.00 3.24
157 158 0.892755 ACCGCACGATTTGGAGTCTA 59.107 50.000 0.00 0.00 0.00 2.59
158 159 1.135083 ACCGCACGATTTGGAGTCTAG 60.135 52.381 0.00 0.00 0.00 2.43
159 160 0.924090 CGCACGATTTGGAGTCTAGC 59.076 55.000 0.00 0.00 0.00 3.42
160 161 0.924090 GCACGATTTGGAGTCTAGCG 59.076 55.000 0.00 0.00 0.00 4.26
161 162 1.736032 GCACGATTTGGAGTCTAGCGT 60.736 52.381 0.00 0.00 0.00 5.07
162 163 2.607187 CACGATTTGGAGTCTAGCGTT 58.393 47.619 0.00 0.00 0.00 4.84
163 164 2.345641 CACGATTTGGAGTCTAGCGTTG 59.654 50.000 0.00 0.00 0.00 4.10
164 165 1.927174 CGATTTGGAGTCTAGCGTTGG 59.073 52.381 0.00 0.00 0.00 3.77
165 166 2.416836 CGATTTGGAGTCTAGCGTTGGA 60.417 50.000 0.00 0.00 0.00 3.53
166 167 3.738281 CGATTTGGAGTCTAGCGTTGGAT 60.738 47.826 0.00 0.00 0.00 3.41
167 168 2.672961 TTGGAGTCTAGCGTTGGATG 57.327 50.000 0.00 0.00 0.00 3.51
168 169 0.175760 TGGAGTCTAGCGTTGGATGC 59.824 55.000 0.00 0.00 0.00 3.91
169 170 0.175760 GGAGTCTAGCGTTGGATGCA 59.824 55.000 0.00 0.00 31.07 3.96
170 171 1.565305 GAGTCTAGCGTTGGATGCAG 58.435 55.000 0.00 0.00 31.07 4.41
171 172 0.460987 AGTCTAGCGTTGGATGCAGC 60.461 55.000 0.00 0.00 31.07 5.25
172 173 1.519234 TCTAGCGTTGGATGCAGCG 60.519 57.895 18.73 18.73 31.07 5.18
173 174 1.811266 CTAGCGTTGGATGCAGCGT 60.811 57.895 23.01 13.05 31.07 5.07
174 175 1.756375 CTAGCGTTGGATGCAGCGTC 61.756 60.000 23.01 15.51 31.07 5.19
175 176 2.225791 TAGCGTTGGATGCAGCGTCT 62.226 55.000 23.01 20.75 31.07 4.18
176 177 2.680913 GCGTTGGATGCAGCGTCTT 61.681 57.895 23.01 0.00 0.00 3.01
177 178 1.868997 CGTTGGATGCAGCGTCTTT 59.131 52.632 15.10 0.00 0.00 2.52
178 179 0.453282 CGTTGGATGCAGCGTCTTTG 60.453 55.000 15.10 0.00 0.00 2.77
179 180 0.593128 GTTGGATGCAGCGTCTTTGT 59.407 50.000 14.44 0.00 0.00 2.83
180 181 1.804151 GTTGGATGCAGCGTCTTTGTA 59.196 47.619 14.44 0.00 0.00 2.41
181 182 2.177394 TGGATGCAGCGTCTTTGTAA 57.823 45.000 14.44 0.00 0.00 2.41
182 183 2.499197 TGGATGCAGCGTCTTTGTAAA 58.501 42.857 14.44 0.00 0.00 2.01
183 184 2.483877 TGGATGCAGCGTCTTTGTAAAG 59.516 45.455 14.44 0.00 37.36 1.85
184 185 2.484264 GGATGCAGCGTCTTTGTAAAGT 59.516 45.455 14.44 0.00 37.31 2.66
185 186 3.424962 GGATGCAGCGTCTTTGTAAAGTC 60.425 47.826 14.44 0.00 37.31 3.01
186 187 2.833794 TGCAGCGTCTTTGTAAAGTCT 58.166 42.857 4.45 0.00 37.31 3.24
187 188 3.985008 TGCAGCGTCTTTGTAAAGTCTA 58.015 40.909 4.45 0.00 37.31 2.59
188 189 3.987868 TGCAGCGTCTTTGTAAAGTCTAG 59.012 43.478 4.45 0.00 37.31 2.43
189 190 3.988517 GCAGCGTCTTTGTAAAGTCTAGT 59.011 43.478 4.45 0.00 37.31 2.57
190 191 4.448060 GCAGCGTCTTTGTAAAGTCTAGTT 59.552 41.667 4.45 0.00 37.31 2.24
191 192 5.050295 GCAGCGTCTTTGTAAAGTCTAGTTT 60.050 40.000 4.45 0.00 37.31 2.66
192 193 6.511282 GCAGCGTCTTTGTAAAGTCTAGTTTT 60.511 38.462 4.45 0.00 37.31 2.43
193 194 7.064064 CAGCGTCTTTGTAAAGTCTAGTTTTC 58.936 38.462 4.45 0.00 37.31 2.29
194 195 6.202379 AGCGTCTTTGTAAAGTCTAGTTTTCC 59.798 38.462 4.45 0.00 37.31 3.13
195 196 6.202379 GCGTCTTTGTAAAGTCTAGTTTTCCT 59.798 38.462 4.45 0.00 37.31 3.36
196 197 7.254692 GCGTCTTTGTAAAGTCTAGTTTTCCTT 60.255 37.037 4.45 0.00 37.31 3.36
197 198 8.610035 CGTCTTTGTAAAGTCTAGTTTTCCTTT 58.390 33.333 4.45 0.00 37.31 3.11
200 201 9.859692 CTTTGTAAAGTCTAGTTTTCCTTTACG 57.140 33.333 13.38 0.00 46.17 3.18
201 202 7.951530 TGTAAAGTCTAGTTTTCCTTTACGG 57.048 36.000 13.38 0.00 46.17 4.02
202 203 7.725251 TGTAAAGTCTAGTTTTCCTTTACGGA 58.275 34.615 13.38 0.00 46.17 4.69
203 204 8.370182 TGTAAAGTCTAGTTTTCCTTTACGGAT 58.630 33.333 13.38 0.00 46.17 4.18
204 205 7.668525 AAAGTCTAGTTTTCCTTTACGGATG 57.331 36.000 0.00 0.00 42.70 3.51
205 206 5.731591 AGTCTAGTTTTCCTTTACGGATGG 58.268 41.667 0.00 0.00 42.70 3.51
206 207 5.482878 AGTCTAGTTTTCCTTTACGGATGGA 59.517 40.000 0.00 0.00 42.70 3.41
207 208 5.811100 GTCTAGTTTTCCTTTACGGATGGAG 59.189 44.000 0.00 0.00 42.70 3.86
208 209 4.635699 AGTTTTCCTTTACGGATGGAGT 57.364 40.909 0.00 0.00 42.70 3.85
209 210 5.750352 AGTTTTCCTTTACGGATGGAGTA 57.250 39.130 0.00 0.00 42.70 2.59
210 211 6.117975 AGTTTTCCTTTACGGATGGAGTAA 57.882 37.500 0.00 0.00 42.70 2.24
211 212 6.718294 AGTTTTCCTTTACGGATGGAGTAAT 58.282 36.000 0.00 0.00 42.70 1.89
212 213 6.822170 AGTTTTCCTTTACGGATGGAGTAATC 59.178 38.462 0.00 0.00 42.70 1.75
213 214 5.943349 TTCCTTTACGGATGGAGTAATCA 57.057 39.130 0.00 0.00 42.70 2.57
214 215 5.943349 TCCTTTACGGATGGAGTAATCAA 57.057 39.130 0.00 0.00 36.69 2.57
215 216 6.494666 TCCTTTACGGATGGAGTAATCAAT 57.505 37.500 0.00 0.00 36.69 2.57
216 217 6.895782 TCCTTTACGGATGGAGTAATCAATT 58.104 36.000 0.00 0.00 36.69 2.32
217 218 6.765989 TCCTTTACGGATGGAGTAATCAATTG 59.234 38.462 0.00 0.00 36.69 2.32
218 219 6.542370 CCTTTACGGATGGAGTAATCAATTGT 59.458 38.462 5.13 0.00 34.50 2.71
219 220 7.067008 CCTTTACGGATGGAGTAATCAATTGTT 59.933 37.037 5.13 2.21 34.50 2.83
220 221 7.548196 TTACGGATGGAGTAATCAATTGTTC 57.452 36.000 5.13 0.00 0.00 3.18
221 222 5.745227 ACGGATGGAGTAATCAATTGTTCT 58.255 37.500 5.13 0.25 0.00 3.01
222 223 6.180472 ACGGATGGAGTAATCAATTGTTCTT 58.820 36.000 5.13 1.11 0.00 2.52
223 224 7.335627 ACGGATGGAGTAATCAATTGTTCTTA 58.664 34.615 5.13 0.19 0.00 2.10
224 225 7.993183 ACGGATGGAGTAATCAATTGTTCTTAT 59.007 33.333 5.13 0.00 0.00 1.73
225 226 9.489084 CGGATGGAGTAATCAATTGTTCTTATA 57.511 33.333 5.13 0.00 0.00 0.98
277 278 3.699025 TTTTCAAAAAGGGGGAGGAGT 57.301 42.857 0.00 0.00 0.00 3.85
278 279 3.699025 TTTCAAAAAGGGGGAGGAGTT 57.301 42.857 0.00 0.00 0.00 3.01
279 280 3.699025 TTCAAAAAGGGGGAGGAGTTT 57.301 42.857 0.00 0.00 0.00 2.66
280 281 3.699025 TCAAAAAGGGGGAGGAGTTTT 57.301 42.857 0.00 0.00 0.00 2.43
281 282 3.572642 TCAAAAAGGGGGAGGAGTTTTC 58.427 45.455 0.00 0.00 0.00 2.29
282 283 3.206639 TCAAAAAGGGGGAGGAGTTTTCT 59.793 43.478 0.00 0.00 0.00 2.52
283 284 2.980246 AAAGGGGGAGGAGTTTTCTG 57.020 50.000 0.00 0.00 0.00 3.02
284 285 1.834540 AAGGGGGAGGAGTTTTCTGT 58.165 50.000 0.00 0.00 0.00 3.41
285 286 2.735259 AGGGGGAGGAGTTTTCTGTA 57.265 50.000 0.00 0.00 0.00 2.74
286 287 2.999928 AGGGGGAGGAGTTTTCTGTAA 58.000 47.619 0.00 0.00 0.00 2.41
287 288 3.542604 AGGGGGAGGAGTTTTCTGTAAT 58.457 45.455 0.00 0.00 0.00 1.89
288 289 4.706616 AGGGGGAGGAGTTTTCTGTAATA 58.293 43.478 0.00 0.00 0.00 0.98
289 290 5.297799 AGGGGGAGGAGTTTTCTGTAATAT 58.702 41.667 0.00 0.00 0.00 1.28
290 291 6.458784 AGGGGGAGGAGTTTTCTGTAATATA 58.541 40.000 0.00 0.00 0.00 0.86
291 292 7.089566 AGGGGGAGGAGTTTTCTGTAATATAT 58.910 38.462 0.00 0.00 0.00 0.86
292 293 8.246615 AGGGGGAGGAGTTTTCTGTAATATATA 58.753 37.037 0.00 0.00 0.00 0.86
293 294 9.059023 GGGGGAGGAGTTTTCTGTAATATATAT 57.941 37.037 0.00 0.00 0.00 0.86
347 348 2.817665 TGATTTCCAATGGGATGTGCA 58.182 42.857 0.00 0.00 44.48 4.57
351 352 1.487300 TCCAATGGGATGTGCAATGG 58.513 50.000 0.00 0.00 38.64 3.16
357 358 1.203162 TGGGATGTGCAATGGGACTTT 60.203 47.619 0.00 0.00 36.16 2.66
362 363 2.950781 TGTGCAATGGGACTTTAACCA 58.049 42.857 0.00 0.00 41.76 3.67
368 369 5.163258 TGCAATGGGACTTTAACCAACATTT 60.163 36.000 0.00 0.00 40.73 2.32
369 370 5.408299 GCAATGGGACTTTAACCAACATTTC 59.592 40.000 0.00 0.00 40.73 2.17
372 373 4.888239 TGGGACTTTAACCAACATTTCGAA 59.112 37.500 0.00 0.00 32.89 3.71
373 374 5.536916 TGGGACTTTAACCAACATTTCGAAT 59.463 36.000 0.00 0.00 32.89 3.34
374 375 6.041069 TGGGACTTTAACCAACATTTCGAATT 59.959 34.615 0.00 0.00 32.89 2.17
375 376 6.926826 GGGACTTTAACCAACATTTCGAATTT 59.073 34.615 0.00 0.00 0.00 1.82
376 377 7.115805 GGGACTTTAACCAACATTTCGAATTTC 59.884 37.037 0.00 0.00 0.00 2.17
385 386 8.924691 ACCAACATTTCGAATTTCATTTGTATG 58.075 29.630 0.00 0.00 0.00 2.39
388 389 9.474920 AACATTTCGAATTTCATTTGTATGTGT 57.525 25.926 0.00 0.00 33.99 3.72
400 401 8.159344 TCATTTGTATGTGTTGTAACATGTCA 57.841 30.769 0.00 0.00 40.93 3.58
417 418 2.106338 TGTCATGTTGATATCCGGGCAT 59.894 45.455 0.00 0.00 0.00 4.40
440 441 7.329717 GCATATGTAACTTGCTAGTGGATCTAC 59.670 40.741 0.36 0.00 34.01 2.59
483 485 0.514255 GAAAACCAGTTACGTCGGCC 59.486 55.000 0.00 0.00 0.00 6.13
566 568 0.034960 GAAAAGGAGGAGAGGTGGCC 60.035 60.000 0.00 0.00 0.00 5.36
579 581 2.691011 GAGGTGGCCAACAACAAAACTA 59.309 45.455 25.90 0.00 40.07 2.24
638 645 8.031277 AGATCAAATTTGCTTTACTGCTTTAGG 58.969 33.333 13.54 0.00 0.00 2.69
656 670 1.208052 AGGCAAGATGCGTGTATCACT 59.792 47.619 0.87 0.00 46.21 3.41
661 675 1.200483 GATGCGTGTATCACTGTCGG 58.800 55.000 0.00 0.00 31.34 4.79
673 687 0.677288 ACTGTCGGACGGTCAAATCA 59.323 50.000 16.70 2.94 30.45 2.57
695 709 6.009589 TCAAGCTCCCAAAATTAGATCACAA 58.990 36.000 0.00 0.00 0.00 3.33
796 814 1.691434 TCGTTTTACGGGGTACAAGGT 59.309 47.619 0.00 0.00 42.81 3.50
853 872 1.854227 GTCTCGCTAGCCCATACAAC 58.146 55.000 9.66 0.00 0.00 3.32
870 889 0.696501 AACAACCTTACGGCCCTGAT 59.303 50.000 0.00 0.00 0.00 2.90
871 890 0.696501 ACAACCTTACGGCCCTGATT 59.303 50.000 0.00 0.00 0.00 2.57
872 891 1.339727 ACAACCTTACGGCCCTGATTC 60.340 52.381 0.00 0.00 0.00 2.52
873 892 0.255033 AACCTTACGGCCCTGATTCC 59.745 55.000 0.00 0.00 0.00 3.01
874 893 1.148498 CCTTACGGCCCTGATTCCC 59.852 63.158 0.00 0.00 0.00 3.97
875 894 1.345715 CCTTACGGCCCTGATTCCCT 61.346 60.000 0.00 0.00 0.00 4.20
876 895 0.179045 CTTACGGCCCTGATTCCCTG 60.179 60.000 0.00 0.00 0.00 4.45
877 896 0.619255 TTACGGCCCTGATTCCCTGA 60.619 55.000 0.00 0.00 0.00 3.86
878 897 0.619255 TACGGCCCTGATTCCCTGAA 60.619 55.000 0.00 0.00 0.00 3.02
879 898 1.153086 CGGCCCTGATTCCCTGAAG 60.153 63.158 0.00 0.00 0.00 3.02
880 899 1.228510 GGCCCTGATTCCCTGAAGG 59.771 63.158 0.00 0.00 0.00 3.46
1075 1095 4.891727 CCGTCTCCGCCCATTCCG 62.892 72.222 0.00 0.00 0.00 4.30
1398 1421 2.703798 GGGGGACGACGACGATGAA 61.704 63.158 15.32 0.00 42.66 2.57
1679 1702 2.710096 TCTACTGCTATTTGTGCCCC 57.290 50.000 0.00 0.00 0.00 5.80
1734 1757 8.406297 CCAAATAGCTAACCAAAATCCTAGAAC 58.594 37.037 0.00 0.00 0.00 3.01
1760 1783 5.163642 TGTTTTGTAATGCAACGTGTAAGGT 60.164 36.000 0.00 0.00 36.72 3.50
1761 1784 6.037940 TGTTTTGTAATGCAACGTGTAAGGTA 59.962 34.615 0.00 0.00 36.72 3.08
1900 1925 0.690411 ATGCAGAGGAGGAGGACCAG 60.690 60.000 0.00 0.00 38.94 4.00
1957 1982 1.684450 TGGGCATCTATCGCGAAACTA 59.316 47.619 15.24 0.00 0.00 2.24
2113 2138 0.893727 AAGAACGGTGGCCATTGTCC 60.894 55.000 9.72 3.89 0.00 4.02
2298 2323 3.269906 AGACCATACAGTCTAGGACCTGT 59.730 47.826 3.53 12.93 45.31 4.00
2773 2798 5.105756 GGCATGTGTTACTTCCAGCTTTTAT 60.106 40.000 0.00 0.00 0.00 1.40
2806 2831 5.580998 TCATACTTCTCACAGGTCCTTAGT 58.419 41.667 0.00 0.00 0.00 2.24
2809 2834 7.839705 TCATACTTCTCACAGGTCCTTAGTATT 59.160 37.037 0.00 0.00 0.00 1.89
2832 2857 1.799994 TCATTCACACTGCATCACACG 59.200 47.619 0.00 0.00 0.00 4.49
2868 2893 4.955925 TGTGATTGTTGCGTTATAAGGG 57.044 40.909 7.25 0.00 0.00 3.95
2869 2894 3.692101 TGTGATTGTTGCGTTATAAGGGG 59.308 43.478 7.25 0.00 0.00 4.79
2909 2934 7.542890 TGCGTTCCATTTCAAATGTATTATGT 58.457 30.769 9.31 0.00 0.00 2.29
2930 2955 3.885297 GTCATGCTGCCAATTATACACCT 59.115 43.478 0.00 0.00 0.00 4.00
2941 2966 5.212194 CAATTATACACCTGCGCCAAATAC 58.788 41.667 4.18 0.00 0.00 1.89
2943 2968 2.483014 TACACCTGCGCCAAATACTT 57.517 45.000 4.18 0.00 0.00 2.24
2952 2977 2.158943 GCGCCAAATACTTAGACTCCCT 60.159 50.000 0.00 0.00 0.00 4.20
2967 2992 5.821097 AGACTCCCTATTTCCTTTTTCCTG 58.179 41.667 0.00 0.00 0.00 3.86
3008 3033 5.413833 CGGCATTTTCCTATGATGAAGCTAT 59.586 40.000 0.00 0.00 0.00 2.97
3022 3049 4.144297 TGAAGCTATCACAAGTTTGGCTT 58.856 39.130 0.00 0.00 40.52 4.35
3026 3053 6.199937 AGCTATCACAAGTTTGGCTTAATG 57.800 37.500 0.00 0.00 35.27 1.90
3027 3054 5.126061 AGCTATCACAAGTTTGGCTTAATGG 59.874 40.000 0.00 0.00 35.27 3.16
3048 3075 8.647143 AATGGAATAGACCAAAATATTTTGCG 57.353 30.769 28.17 23.33 44.62 4.85
3063 3090 8.570096 AATATTTTGCGAGTGAATTGATCATG 57.430 30.769 0.00 0.00 40.97 3.07
3074 3101 6.947733 AGTGAATTGATCATGTAAGGGAACAA 59.052 34.615 0.00 0.00 40.97 2.83
3078 3105 7.722949 ATTGATCATGTAAGGGAACAAATGT 57.277 32.000 0.00 0.00 31.09 2.71
3079 3106 7.537596 TTGATCATGTAAGGGAACAAATGTT 57.462 32.000 0.00 0.00 41.64 2.71
3082 3109 6.968263 TCATGTAAGGGAACAAATGTTGAA 57.032 33.333 3.05 0.00 38.56 2.69
3104 3131 4.822036 ATACGTTTGTTTGTAGCAAGCA 57.178 36.364 0.00 0.00 0.00 3.91
3134 3161 4.271696 TGGTCATAATTAGATCCCAGCG 57.728 45.455 0.00 0.00 0.00 5.18
3244 3272 1.668751 CACCTGTTACGTGTGCACTTT 59.331 47.619 19.41 4.52 0.00 2.66
3263 3291 6.972901 GCACTTTAGTTCATTTATTACCCAGC 59.027 38.462 0.00 0.00 0.00 4.85
3273 3301 4.866508 TTATTACCCAGCAGTCCTATCG 57.133 45.455 0.00 0.00 0.00 2.92
3301 3342 6.247727 TGTACTATTAACCGAACACGTGTA 57.752 37.500 23.69 4.30 0.00 2.90
3345 3386 2.915349 TCAGCATGATTCAGAAGGAGC 58.085 47.619 0.00 0.00 42.56 4.70
3348 3389 2.025605 AGCATGATTCAGAAGGAGCCAA 60.026 45.455 0.00 0.00 0.00 4.52
3363 3404 2.022764 GCCAATGGTGGGTAAATTGC 57.977 50.000 0.00 0.00 46.09 3.56
3364 3405 1.277557 GCCAATGGTGGGTAAATTGCA 59.722 47.619 0.00 0.00 46.09 4.08
3365 3406 2.677613 GCCAATGGTGGGTAAATTGCAG 60.678 50.000 0.00 0.00 46.09 4.41
3366 3407 2.620242 CAATGGTGGGTAAATTGCAGC 58.380 47.619 0.00 0.00 0.00 5.25
3367 3408 1.935799 ATGGTGGGTAAATTGCAGCA 58.064 45.000 0.00 0.00 0.00 4.41
3368 3409 1.709578 TGGTGGGTAAATTGCAGCAA 58.290 45.000 11.07 11.07 0.00 3.91
3369 3410 1.617850 TGGTGGGTAAATTGCAGCAAG 59.382 47.619 14.47 0.00 0.00 4.01
3370 3411 1.618343 GGTGGGTAAATTGCAGCAAGT 59.382 47.619 14.47 8.35 0.00 3.16
3371 3412 2.352715 GGTGGGTAAATTGCAGCAAGTC 60.353 50.000 14.47 0.00 0.00 3.01
3372 3413 2.558359 GTGGGTAAATTGCAGCAAGTCT 59.442 45.455 14.47 4.92 0.00 3.24
3373 3414 3.756434 GTGGGTAAATTGCAGCAAGTCTA 59.244 43.478 14.47 3.99 0.00 2.59
3374 3415 4.009675 TGGGTAAATTGCAGCAAGTCTAG 58.990 43.478 14.47 0.00 0.00 2.43
3375 3416 3.378427 GGGTAAATTGCAGCAAGTCTAGG 59.622 47.826 14.47 0.00 0.00 3.02
3376 3417 3.378427 GGTAAATTGCAGCAAGTCTAGGG 59.622 47.826 14.47 0.00 0.00 3.53
3377 3418 2.887151 AATTGCAGCAAGTCTAGGGT 57.113 45.000 14.47 0.00 0.00 4.34
3378 3419 4.301072 AAATTGCAGCAAGTCTAGGGTA 57.699 40.909 14.47 0.00 0.00 3.69
3379 3420 4.510167 AATTGCAGCAAGTCTAGGGTAT 57.490 40.909 14.47 0.00 0.00 2.73
3380 3421 4.510167 ATTGCAGCAAGTCTAGGGTATT 57.490 40.909 14.47 0.00 0.00 1.89
3381 3422 5.630415 ATTGCAGCAAGTCTAGGGTATTA 57.370 39.130 14.47 0.00 0.00 0.98
3382 3423 4.672587 TGCAGCAAGTCTAGGGTATTAG 57.327 45.455 0.00 0.00 0.00 1.73
3383 3424 3.388024 TGCAGCAAGTCTAGGGTATTAGG 59.612 47.826 0.00 0.00 0.00 2.69
3384 3425 3.388350 GCAGCAAGTCTAGGGTATTAGGT 59.612 47.826 0.00 0.00 0.00 3.08
3385 3426 4.740934 GCAGCAAGTCTAGGGTATTAGGTG 60.741 50.000 0.00 0.00 0.00 4.00
3386 3427 4.406003 CAGCAAGTCTAGGGTATTAGGTGT 59.594 45.833 0.00 0.00 0.00 4.16
3387 3428 4.406003 AGCAAGTCTAGGGTATTAGGTGTG 59.594 45.833 0.00 0.00 0.00 3.82
3388 3429 4.161754 GCAAGTCTAGGGTATTAGGTGTGT 59.838 45.833 0.00 0.00 0.00 3.72
3389 3430 5.338137 GCAAGTCTAGGGTATTAGGTGTGTT 60.338 44.000 0.00 0.00 0.00 3.32
3390 3431 5.934402 AGTCTAGGGTATTAGGTGTGTTG 57.066 43.478 0.00 0.00 0.00 3.33
3391 3432 5.339477 AGTCTAGGGTATTAGGTGTGTTGT 58.661 41.667 0.00 0.00 0.00 3.32
3392 3433 5.187186 AGTCTAGGGTATTAGGTGTGTTGTG 59.813 44.000 0.00 0.00 0.00 3.33
3393 3434 3.067684 AGGGTATTAGGTGTGTTGTGC 57.932 47.619 0.00 0.00 0.00 4.57
3394 3435 2.642807 AGGGTATTAGGTGTGTTGTGCT 59.357 45.455 0.00 0.00 0.00 4.40
3395 3436 2.747446 GGGTATTAGGTGTGTTGTGCTG 59.253 50.000 0.00 0.00 0.00 4.41
3396 3437 3.408634 GGTATTAGGTGTGTTGTGCTGT 58.591 45.455 0.00 0.00 0.00 4.40
3397 3438 3.188460 GGTATTAGGTGTGTTGTGCTGTG 59.812 47.826 0.00 0.00 0.00 3.66
3398 3439 1.021202 TTAGGTGTGTTGTGCTGTGC 58.979 50.000 0.00 0.00 0.00 4.57
3399 3440 0.107459 TAGGTGTGTTGTGCTGTGCA 60.107 50.000 0.00 0.00 35.60 4.57
3400 3441 0.964860 AGGTGTGTTGTGCTGTGCAA 60.965 50.000 0.00 0.00 41.47 4.08
3401 3442 0.108898 GGTGTGTTGTGCTGTGCAAA 60.109 50.000 0.00 0.00 41.47 3.68
3402 3443 1.671261 GGTGTGTTGTGCTGTGCAAAA 60.671 47.619 0.00 0.00 41.47 2.44
3407 3448 1.937278 TTGTGCTGTGCAAAACATGG 58.063 45.000 0.00 0.00 41.47 3.66
3408 3449 1.109609 TGTGCTGTGCAAAACATGGA 58.890 45.000 0.00 0.00 41.47 3.41
3409 3450 1.479730 TGTGCTGTGCAAAACATGGAA 59.520 42.857 0.00 0.00 41.47 3.53
3410 3451 2.102757 TGTGCTGTGCAAAACATGGAAT 59.897 40.909 0.00 0.00 41.47 3.01
3411 3452 2.733026 GTGCTGTGCAAAACATGGAATC 59.267 45.455 0.00 0.00 41.47 2.52
3412 3453 2.364647 TGCTGTGCAAAACATGGAATCA 59.635 40.909 0.00 0.00 38.39 2.57
3413 3454 3.181468 TGCTGTGCAAAACATGGAATCAA 60.181 39.130 0.00 0.00 38.39 2.57
3414 3455 3.998341 GCTGTGCAAAACATGGAATCAAT 59.002 39.130 0.00 0.00 38.39 2.57
3415 3456 4.092383 GCTGTGCAAAACATGGAATCAATC 59.908 41.667 0.00 0.00 38.39 2.67
3416 3457 5.471556 TGTGCAAAACATGGAATCAATCT 57.528 34.783 0.00 0.00 32.36 2.40
3417 3458 5.231702 TGTGCAAAACATGGAATCAATCTG 58.768 37.500 0.00 0.00 32.36 2.90
3418 3459 4.628333 GTGCAAAACATGGAATCAATCTGG 59.372 41.667 0.00 0.00 0.00 3.86
3419 3460 4.283978 TGCAAAACATGGAATCAATCTGGT 59.716 37.500 0.00 0.00 0.00 4.00
3420 3461 4.866486 GCAAAACATGGAATCAATCTGGTC 59.134 41.667 0.00 0.00 0.00 4.02
3421 3462 5.413499 CAAAACATGGAATCAATCTGGTCC 58.587 41.667 0.00 0.00 0.00 4.46
3422 3463 2.923121 ACATGGAATCAATCTGGTCCG 58.077 47.619 0.00 0.00 32.45 4.79
3423 3464 1.605710 CATGGAATCAATCTGGTCCGC 59.394 52.381 0.00 0.00 32.45 5.54
3424 3465 0.107214 TGGAATCAATCTGGTCCGCC 60.107 55.000 0.00 0.00 32.45 6.13
3425 3466 0.107214 GGAATCAATCTGGTCCGCCA 60.107 55.000 0.00 0.00 43.73 5.69
3426 3467 1.477558 GGAATCAATCTGGTCCGCCAT 60.478 52.381 0.00 0.00 45.05 4.40
3427 3468 2.224523 GGAATCAATCTGGTCCGCCATA 60.225 50.000 0.00 0.00 45.05 2.74
3428 3469 3.560025 GGAATCAATCTGGTCCGCCATAT 60.560 47.826 0.00 0.00 45.05 1.78
3429 3470 2.549064 TCAATCTGGTCCGCCATATG 57.451 50.000 0.00 0.00 45.05 1.78
3430 3471 0.877071 CAATCTGGTCCGCCATATGC 59.123 55.000 0.00 0.00 45.05 3.14
3431 3472 0.473755 AATCTGGTCCGCCATATGCA 59.526 50.000 0.00 0.00 45.05 3.96
3432 3473 0.035881 ATCTGGTCCGCCATATGCAG 59.964 55.000 0.00 0.00 45.05 4.41
3433 3474 1.048160 TCTGGTCCGCCATATGCAGA 61.048 55.000 0.00 0.84 45.05 4.26
3434 3475 0.035881 CTGGTCCGCCATATGCAGAT 59.964 55.000 0.00 0.00 45.05 2.90
3435 3476 0.250424 TGGTCCGCCATATGCAGATG 60.250 55.000 14.47 14.47 40.46 2.90
3443 3484 2.860009 CCATATGCAGATGGTTGAGCT 58.140 47.619 28.62 0.00 41.42 4.09
3444 3485 2.552743 CCATATGCAGATGGTTGAGCTG 59.447 50.000 28.62 4.07 41.42 4.24
3445 3486 3.211865 CATATGCAGATGGTTGAGCTGT 58.788 45.455 13.62 0.00 40.48 4.40
3446 3487 2.211250 ATGCAGATGGTTGAGCTGTT 57.789 45.000 0.00 0.00 40.48 3.16
3447 3488 2.857186 TGCAGATGGTTGAGCTGTTA 57.143 45.000 0.00 0.00 40.48 2.41
3448 3489 2.703416 TGCAGATGGTTGAGCTGTTAG 58.297 47.619 0.00 0.00 40.48 2.34
3449 3490 2.012673 GCAGATGGTTGAGCTGTTAGG 58.987 52.381 0.00 0.00 40.48 2.69
3450 3491 2.355108 GCAGATGGTTGAGCTGTTAGGA 60.355 50.000 0.00 0.00 40.48 2.94
3451 3492 3.529533 CAGATGGTTGAGCTGTTAGGAG 58.470 50.000 0.00 0.00 33.07 3.69
3452 3493 2.503356 AGATGGTTGAGCTGTTAGGAGG 59.497 50.000 0.00 0.00 0.00 4.30
3453 3494 2.024176 TGGTTGAGCTGTTAGGAGGA 57.976 50.000 0.00 0.00 0.00 3.71
3454 3495 2.551270 TGGTTGAGCTGTTAGGAGGAT 58.449 47.619 0.00 0.00 0.00 3.24
3455 3496 2.912956 TGGTTGAGCTGTTAGGAGGATT 59.087 45.455 0.00 0.00 0.00 3.01
3456 3497 3.330701 TGGTTGAGCTGTTAGGAGGATTT 59.669 43.478 0.00 0.00 0.00 2.17
3457 3498 3.691609 GGTTGAGCTGTTAGGAGGATTTG 59.308 47.826 0.00 0.00 0.00 2.32
3458 3499 3.634397 TGAGCTGTTAGGAGGATTTGG 57.366 47.619 0.00 0.00 0.00 3.28
3459 3500 3.181329 TGAGCTGTTAGGAGGATTTGGA 58.819 45.455 0.00 0.00 0.00 3.53
3460 3501 3.782523 TGAGCTGTTAGGAGGATTTGGAT 59.217 43.478 0.00 0.00 0.00 3.41
3461 3502 4.141620 TGAGCTGTTAGGAGGATTTGGATC 60.142 45.833 0.00 0.00 0.00 3.36
3462 3503 3.782523 AGCTGTTAGGAGGATTTGGATCA 59.217 43.478 0.00 0.00 33.77 2.92
3463 3504 4.133078 GCTGTTAGGAGGATTTGGATCAG 58.867 47.826 0.00 0.00 33.77 2.90
3464 3505 4.133078 CTGTTAGGAGGATTTGGATCAGC 58.867 47.826 0.00 0.00 33.77 4.26
3465 3506 3.117888 TGTTAGGAGGATTTGGATCAGCC 60.118 47.826 0.00 0.00 33.77 4.85
3473 3514 2.981302 TGGATCAGCCACGTCTGG 59.019 61.111 4.59 0.00 43.33 3.86
3474 3515 1.913262 TGGATCAGCCACGTCTGGT 60.913 57.895 4.59 0.00 43.33 4.00
3475 3516 1.448540 GGATCAGCCACGTCTGGTG 60.449 63.158 7.33 7.33 46.57 4.17
3476 3517 2.046892 ATCAGCCACGTCTGGTGC 60.047 61.111 8.53 0.00 45.62 5.01
3477 3518 2.513026 GATCAGCCACGTCTGGTGCT 62.513 60.000 8.53 0.22 45.62 4.40
3478 3519 2.116983 ATCAGCCACGTCTGGTGCTT 62.117 55.000 8.53 0.00 45.62 3.91
3479 3520 1.893808 CAGCCACGTCTGGTGCTTT 60.894 57.895 1.34 0.00 45.62 3.51
3480 3521 1.152963 AGCCACGTCTGGTGCTTTT 60.153 52.632 0.00 0.00 45.62 2.27
3481 3522 0.751643 AGCCACGTCTGGTGCTTTTT 60.752 50.000 0.00 0.00 45.62 1.94
3515 3556 8.409358 AATGGAGATATTTTATTGTGGTAGGC 57.591 34.615 0.00 0.00 0.00 3.93
3516 3557 5.995282 TGGAGATATTTTATTGTGGTAGGCG 59.005 40.000 0.00 0.00 0.00 5.52
3517 3558 5.995897 GGAGATATTTTATTGTGGTAGGCGT 59.004 40.000 0.00 0.00 0.00 5.68
3518 3559 6.147328 GGAGATATTTTATTGTGGTAGGCGTC 59.853 42.308 0.00 0.00 0.00 5.19
3519 3560 6.827727 AGATATTTTATTGTGGTAGGCGTCT 58.172 36.000 0.00 0.00 0.00 4.18
3520 3561 7.280356 AGATATTTTATTGTGGTAGGCGTCTT 58.720 34.615 0.00 0.00 0.00 3.01
3521 3562 5.813080 ATTTTATTGTGGTAGGCGTCTTC 57.187 39.130 0.00 0.00 0.00 2.87
3522 3563 2.973694 TATTGTGGTAGGCGTCTTCC 57.026 50.000 5.63 5.63 0.00 3.46
3523 3564 0.252197 ATTGTGGTAGGCGTCTTCCC 59.748 55.000 10.44 4.33 30.34 3.97
3524 3565 1.122632 TTGTGGTAGGCGTCTTCCCA 61.123 55.000 10.44 7.13 30.34 4.37
3525 3566 0.907704 TGTGGTAGGCGTCTTCCCAT 60.908 55.000 10.44 0.00 30.34 4.00
3526 3567 1.117150 GTGGTAGGCGTCTTCCCATA 58.883 55.000 10.44 0.00 30.34 2.74
3527 3568 1.483415 GTGGTAGGCGTCTTCCCATAA 59.517 52.381 10.44 0.00 30.34 1.90
3528 3569 2.104281 GTGGTAGGCGTCTTCCCATAAT 59.896 50.000 10.44 0.00 30.34 1.28
3529 3570 3.322828 GTGGTAGGCGTCTTCCCATAATA 59.677 47.826 10.44 0.00 30.34 0.98
3530 3571 4.020485 GTGGTAGGCGTCTTCCCATAATAT 60.020 45.833 10.44 0.00 30.34 1.28
3531 3572 4.222145 TGGTAGGCGTCTTCCCATAATATC 59.778 45.833 10.44 0.00 30.34 1.63
3532 3573 4.222145 GGTAGGCGTCTTCCCATAATATCA 59.778 45.833 0.34 0.00 0.00 2.15
3533 3574 4.543590 AGGCGTCTTCCCATAATATCAG 57.456 45.455 0.00 0.00 0.00 2.90
3534 3575 3.904339 AGGCGTCTTCCCATAATATCAGT 59.096 43.478 0.00 0.00 0.00 3.41
3535 3576 3.997021 GGCGTCTTCCCATAATATCAGTG 59.003 47.826 0.00 0.00 0.00 3.66
3536 3577 4.503296 GGCGTCTTCCCATAATATCAGTGT 60.503 45.833 0.00 0.00 0.00 3.55
3537 3578 4.449068 GCGTCTTCCCATAATATCAGTGTG 59.551 45.833 0.00 0.00 0.00 3.82
3538 3579 5.601662 CGTCTTCCCATAATATCAGTGTGT 58.398 41.667 0.00 0.00 0.00 3.72
3539 3580 6.049149 CGTCTTCCCATAATATCAGTGTGTT 58.951 40.000 0.00 0.00 0.00 3.32
3540 3581 6.201044 CGTCTTCCCATAATATCAGTGTGTTC 59.799 42.308 0.00 0.00 0.00 3.18
3541 3582 7.275920 GTCTTCCCATAATATCAGTGTGTTCT 58.724 38.462 0.00 0.00 0.00 3.01
3542 3583 8.421784 GTCTTCCCATAATATCAGTGTGTTCTA 58.578 37.037 0.00 0.00 0.00 2.10
3543 3584 8.642432 TCTTCCCATAATATCAGTGTGTTCTAG 58.358 37.037 0.00 0.00 0.00 2.43
3544 3585 7.914427 TCCCATAATATCAGTGTGTTCTAGT 57.086 36.000 0.00 0.00 0.00 2.57
3545 3586 9.429109 TTCCCATAATATCAGTGTGTTCTAGTA 57.571 33.333 0.00 0.00 0.00 1.82
3546 3587 9.601810 TCCCATAATATCAGTGTGTTCTAGTAT 57.398 33.333 0.00 0.00 0.00 2.12
3553 3594 5.877031 TCAGTGTGTTCTAGTATAACGAGC 58.123 41.667 0.00 0.00 0.00 5.03
3554 3595 4.729086 CAGTGTGTTCTAGTATAACGAGCG 59.271 45.833 0.00 0.00 0.00 5.03
3555 3596 4.633126 AGTGTGTTCTAGTATAACGAGCGA 59.367 41.667 0.00 0.00 0.00 4.93
3556 3597 5.122869 AGTGTGTTCTAGTATAACGAGCGAA 59.877 40.000 0.00 0.00 0.00 4.70
3557 3598 5.226772 GTGTGTTCTAGTATAACGAGCGAAC 59.773 44.000 0.00 0.00 0.00 3.95
3558 3599 5.106594 TGTGTTCTAGTATAACGAGCGAACA 60.107 40.000 0.00 0.00 37.51 3.18
3559 3600 5.970023 GTGTTCTAGTATAACGAGCGAACAT 59.030 40.000 0.00 0.00 40.58 2.71
3560 3601 6.471519 GTGTTCTAGTATAACGAGCGAACATT 59.528 38.462 0.00 0.00 40.58 2.71
3561 3602 7.641411 GTGTTCTAGTATAACGAGCGAACATTA 59.359 37.037 0.00 0.00 40.58 1.90
3562 3603 7.641411 TGTTCTAGTATAACGAGCGAACATTAC 59.359 37.037 0.00 0.00 35.67 1.89
3563 3604 7.250445 TCTAGTATAACGAGCGAACATTACA 57.750 36.000 0.00 0.00 0.00 2.41
3564 3605 7.868775 TCTAGTATAACGAGCGAACATTACAT 58.131 34.615 0.00 0.00 0.00 2.29
3565 3606 6.749216 AGTATAACGAGCGAACATTACATG 57.251 37.500 0.00 0.00 0.00 3.21
3566 3607 6.500910 AGTATAACGAGCGAACATTACATGA 58.499 36.000 0.00 0.00 0.00 3.07
3567 3608 7.145985 AGTATAACGAGCGAACATTACATGAT 58.854 34.615 0.00 0.00 0.00 2.45
3568 3609 4.520743 AACGAGCGAACATTACATGATG 57.479 40.909 0.00 0.00 0.00 3.07
3569 3610 3.521560 ACGAGCGAACATTACATGATGT 58.478 40.909 2.65 2.65 41.83 3.06
3570 3611 3.306973 ACGAGCGAACATTACATGATGTG 59.693 43.478 8.61 0.00 40.03 3.21
3571 3612 3.306973 CGAGCGAACATTACATGATGTGT 59.693 43.478 8.61 0.00 44.95 3.72
3572 3613 4.548916 CGAGCGAACATTACATGATGTGTC 60.549 45.833 8.61 0.59 42.29 3.67
3573 3614 4.507710 AGCGAACATTACATGATGTGTCT 58.492 39.130 8.61 0.00 42.29 3.41
3574 3615 4.937620 AGCGAACATTACATGATGTGTCTT 59.062 37.500 8.61 0.00 42.29 3.01
3575 3616 6.106003 AGCGAACATTACATGATGTGTCTTA 58.894 36.000 8.61 0.00 42.29 2.10
3576 3617 6.763135 AGCGAACATTACATGATGTGTCTTAT 59.237 34.615 8.61 0.00 42.29 1.73
3577 3618 6.847792 GCGAACATTACATGATGTGTCTTATG 59.152 38.462 8.61 6.62 42.29 1.90
3578 3619 7.347448 CGAACATTACATGATGTGTCTTATGG 58.653 38.462 8.61 0.00 42.29 2.74
3579 3620 6.624352 ACATTACATGATGTGTCTTATGGC 57.376 37.500 8.61 0.00 42.29 4.40
3580 3621 5.237127 ACATTACATGATGTGTCTTATGGCG 59.763 40.000 8.61 0.00 42.29 5.69
3581 3622 3.266510 ACATGATGTGTCTTATGGCGT 57.733 42.857 0.00 0.00 35.77 5.68
3582 3623 2.938451 ACATGATGTGTCTTATGGCGTG 59.062 45.455 0.00 0.00 35.77 5.34
3583 3624 3.197265 CATGATGTGTCTTATGGCGTGA 58.803 45.455 0.00 0.00 0.00 4.35
3584 3625 3.541996 TGATGTGTCTTATGGCGTGAT 57.458 42.857 0.00 0.00 0.00 3.06
3585 3626 3.197265 TGATGTGTCTTATGGCGTGATG 58.803 45.455 0.00 0.00 0.00 3.07
3586 3627 2.760634 TGTGTCTTATGGCGTGATGT 57.239 45.000 0.00 0.00 0.00 3.06
3587 3628 2.616960 TGTGTCTTATGGCGTGATGTC 58.383 47.619 0.00 0.00 0.00 3.06
3588 3629 1.933853 GTGTCTTATGGCGTGATGTCC 59.066 52.381 0.00 0.00 0.00 4.02
3589 3630 1.831106 TGTCTTATGGCGTGATGTCCT 59.169 47.619 0.00 0.00 0.00 3.85
3590 3631 2.205074 GTCTTATGGCGTGATGTCCTG 58.795 52.381 0.00 0.00 0.00 3.86
3591 3632 1.831106 TCTTATGGCGTGATGTCCTGT 59.169 47.619 0.00 0.00 0.00 4.00
3592 3633 1.935873 CTTATGGCGTGATGTCCTGTG 59.064 52.381 0.00 0.00 0.00 3.66
3593 3634 0.461870 TATGGCGTGATGTCCTGTGC 60.462 55.000 0.00 0.00 0.00 4.57
3594 3635 3.490759 GGCGTGATGTCCTGTGCG 61.491 66.667 0.00 0.00 0.00 5.34
3595 3636 4.152625 GCGTGATGTCCTGTGCGC 62.153 66.667 0.00 0.00 38.15 6.09
3596 3637 3.490759 CGTGATGTCCTGTGCGCC 61.491 66.667 4.18 0.00 0.00 6.53
3597 3638 3.490759 GTGATGTCCTGTGCGCCG 61.491 66.667 4.18 0.00 0.00 6.46
3598 3639 4.002506 TGATGTCCTGTGCGCCGT 62.003 61.111 4.18 0.00 0.00 5.68
3599 3640 3.490759 GATGTCCTGTGCGCCGTG 61.491 66.667 4.18 0.00 0.00 4.94
3629 3670 4.170062 CGGCCATGCACGCTCTTG 62.170 66.667 2.24 0.00 0.00 3.02
3630 3671 2.747460 GGCCATGCACGCTCTTGA 60.747 61.111 0.00 0.00 0.00 3.02
3631 3672 2.758089 GGCCATGCACGCTCTTGAG 61.758 63.158 0.00 0.00 0.00 3.02
3632 3673 1.742880 GCCATGCACGCTCTTGAGA 60.743 57.895 1.30 0.00 0.00 3.27
3633 3674 1.094073 GCCATGCACGCTCTTGAGAT 61.094 55.000 1.30 0.00 0.00 2.75
3634 3675 0.656259 CCATGCACGCTCTTGAGATG 59.344 55.000 1.30 0.49 0.00 2.90
3635 3676 0.656259 CATGCACGCTCTTGAGATGG 59.344 55.000 1.30 0.00 0.00 3.51
3636 3677 0.251354 ATGCACGCTCTTGAGATGGT 59.749 50.000 1.30 0.00 0.00 3.55
3637 3678 0.894835 TGCACGCTCTTGAGATGGTA 59.105 50.000 1.30 0.00 0.00 3.25
3638 3679 1.275010 TGCACGCTCTTGAGATGGTAA 59.725 47.619 1.30 0.00 0.00 2.85
3639 3680 1.661112 GCACGCTCTTGAGATGGTAAC 59.339 52.381 1.30 0.00 0.00 2.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.240049 GTCTGGACGGACACGAAC 57.760 61.111 6.41 0.00 44.60 3.95
10 11 1.718757 GCCCATGAATGCGTCTGGAC 61.719 60.000 0.00 0.00 30.28 4.02
11 12 1.451927 GCCCATGAATGCGTCTGGA 60.452 57.895 0.00 0.00 30.28 3.86
12 13 2.484062 GGCCCATGAATGCGTCTGG 61.484 63.158 0.00 0.00 0.00 3.86
13 14 1.314534 TTGGCCCATGAATGCGTCTG 61.315 55.000 0.00 0.00 0.00 3.51
14 15 0.611618 TTTGGCCCATGAATGCGTCT 60.612 50.000 0.00 0.00 0.00 4.18
15 16 0.461135 ATTTGGCCCATGAATGCGTC 59.539 50.000 0.00 0.00 0.00 5.19
16 17 0.903942 AATTTGGCCCATGAATGCGT 59.096 45.000 0.00 0.00 0.00 5.24
17 18 1.666700 CAAATTTGGCCCATGAATGCG 59.333 47.619 10.49 0.00 0.00 4.73
18 19 1.402613 GCAAATTTGGCCCATGAATGC 59.597 47.619 19.47 0.00 0.00 3.56
19 20 2.940410 GAGCAAATTTGGCCCATGAATG 59.060 45.455 19.47 0.00 0.00 2.67
20 21 2.092807 GGAGCAAATTTGGCCCATGAAT 60.093 45.455 19.47 0.00 0.00 2.57
21 22 1.278699 GGAGCAAATTTGGCCCATGAA 59.721 47.619 19.47 0.00 0.00 2.57
22 23 0.903942 GGAGCAAATTTGGCCCATGA 59.096 50.000 19.47 0.00 0.00 3.07
23 24 0.614294 TGGAGCAAATTTGGCCCATG 59.386 50.000 19.47 0.00 30.15 3.66
24 25 1.360185 TTGGAGCAAATTTGGCCCAT 58.640 45.000 19.47 0.00 33.58 4.00
25 26 1.135094 TTTGGAGCAAATTTGGCCCA 58.865 45.000 19.47 15.71 32.27 5.36
26 27 2.495155 ATTTGGAGCAAATTTGGCCC 57.505 45.000 19.47 13.81 40.60 5.80
41 42 0.540830 TCCACCCGACCCCAAATTTG 60.541 55.000 11.40 11.40 0.00 2.32
42 43 0.541063 GTCCACCCGACCCCAAATTT 60.541 55.000 0.00 0.00 35.23 1.82
43 44 1.076014 GTCCACCCGACCCCAAATT 59.924 57.895 0.00 0.00 35.23 1.82
44 45 1.721093 TTGTCCACCCGACCCCAAAT 61.721 55.000 0.00 0.00 41.18 2.32
45 46 1.934459 TTTGTCCACCCGACCCCAAA 61.934 55.000 0.00 0.00 41.18 3.28
46 47 1.934459 TTTTGTCCACCCGACCCCAA 61.934 55.000 0.00 0.00 41.18 4.12
47 48 1.934459 TTTTTGTCCACCCGACCCCA 61.934 55.000 0.00 0.00 41.18 4.96
48 49 1.152715 TTTTTGTCCACCCGACCCC 60.153 57.895 0.00 0.00 41.18 4.95
49 50 4.583086 TTTTTGTCCACCCGACCC 57.417 55.556 0.00 0.00 41.18 4.46
69 70 0.036306 AAAGTGGTCCGGTGATGTCC 59.964 55.000 0.00 0.00 0.00 4.02
70 71 1.156736 CAAAGTGGTCCGGTGATGTC 58.843 55.000 0.00 0.00 0.00 3.06
71 72 0.472471 ACAAAGTGGTCCGGTGATGT 59.528 50.000 0.00 0.00 0.00 3.06
72 73 1.604604 AACAAAGTGGTCCGGTGATG 58.395 50.000 0.00 0.00 0.00 3.07
73 74 1.953686 CAAACAAAGTGGTCCGGTGAT 59.046 47.619 0.00 0.00 0.00 3.06
74 75 1.340211 ACAAACAAAGTGGTCCGGTGA 60.340 47.619 0.00 0.00 0.00 4.02
75 76 1.099689 ACAAACAAAGTGGTCCGGTG 58.900 50.000 0.00 0.00 0.00 4.94
76 77 1.842052 AACAAACAAAGTGGTCCGGT 58.158 45.000 0.00 0.00 0.00 5.28
77 78 2.535331 CAAACAAACAAAGTGGTCCGG 58.465 47.619 0.00 0.00 0.00 5.14
78 79 2.535331 CCAAACAAACAAAGTGGTCCG 58.465 47.619 0.00 0.00 0.00 4.79
79 80 2.235155 ACCCAAACAAACAAAGTGGTCC 59.765 45.455 0.00 0.00 0.00 4.46
80 81 3.603158 ACCCAAACAAACAAAGTGGTC 57.397 42.857 0.00 0.00 0.00 4.02
81 82 4.682050 GCATACCCAAACAAACAAAGTGGT 60.682 41.667 0.00 0.00 0.00 4.16
82 83 3.807071 GCATACCCAAACAAACAAAGTGG 59.193 43.478 0.00 0.00 0.00 4.00
83 84 3.807071 GGCATACCCAAACAAACAAAGTG 59.193 43.478 0.00 0.00 0.00 3.16
84 85 3.709141 AGGCATACCCAAACAAACAAAGT 59.291 39.130 0.00 0.00 36.11 2.66
85 86 4.057432 CAGGCATACCCAAACAAACAAAG 58.943 43.478 0.00 0.00 36.11 2.77
86 87 3.452627 ACAGGCATACCCAAACAAACAAA 59.547 39.130 0.00 0.00 36.11 2.83
87 88 3.034635 ACAGGCATACCCAAACAAACAA 58.965 40.909 0.00 0.00 36.11 2.83
88 89 2.672098 ACAGGCATACCCAAACAAACA 58.328 42.857 0.00 0.00 36.11 2.83
89 90 3.389221 CAACAGGCATACCCAAACAAAC 58.611 45.455 0.00 0.00 36.11 2.93
90 91 2.366916 CCAACAGGCATACCCAAACAAA 59.633 45.455 0.00 0.00 36.11 2.83
91 92 1.967066 CCAACAGGCATACCCAAACAA 59.033 47.619 0.00 0.00 36.11 2.83
92 93 1.626686 CCAACAGGCATACCCAAACA 58.373 50.000 0.00 0.00 36.11 2.83
93 94 0.894835 CCCAACAGGCATACCCAAAC 59.105 55.000 0.00 0.00 36.11 2.93
94 95 3.372557 CCCAACAGGCATACCCAAA 57.627 52.632 0.00 0.00 36.11 3.28
104 105 1.659794 CAAAACTCGGCCCAACAGG 59.340 57.895 0.00 0.00 39.47 4.00
105 106 1.659794 CCAAAACTCGGCCCAACAG 59.340 57.895 0.00 0.00 0.00 3.16
106 107 2.494530 GCCAAAACTCGGCCCAACA 61.495 57.895 0.00 0.00 44.22 3.33
107 108 2.338620 GCCAAAACTCGGCCCAAC 59.661 61.111 0.00 0.00 44.22 3.77
113 114 1.007849 CGTTTGGGCCAAAACTCGG 60.008 57.895 31.94 13.36 37.80 4.63
114 115 0.382515 TTCGTTTGGGCCAAAACTCG 59.617 50.000 31.94 28.41 37.80 4.18
115 116 2.035321 TCATTCGTTTGGGCCAAAACTC 59.965 45.455 31.94 19.04 37.80 3.01
116 117 2.035632 TCATTCGTTTGGGCCAAAACT 58.964 42.857 31.94 14.48 37.80 2.66
117 118 2.517650 TCATTCGTTTGGGCCAAAAC 57.482 45.000 31.94 23.87 35.03 2.43
118 119 3.198872 GTTTCATTCGTTTGGGCCAAAA 58.801 40.909 31.94 18.19 35.03 2.44
119 120 2.483889 GGTTTCATTCGTTTGGGCCAAA 60.484 45.455 27.28 27.28 0.00 3.28
120 121 1.069358 GGTTTCATTCGTTTGGGCCAA 59.931 47.619 16.66 16.66 0.00 4.52
121 122 0.676736 GGTTTCATTCGTTTGGGCCA 59.323 50.000 0.00 0.00 0.00 5.36
122 123 0.388006 CGGTTTCATTCGTTTGGGCC 60.388 55.000 0.00 0.00 0.00 5.80
123 124 1.006825 GCGGTTTCATTCGTTTGGGC 61.007 55.000 0.00 0.00 0.00 5.36
124 125 0.312416 TGCGGTTTCATTCGTTTGGG 59.688 50.000 0.00 0.00 0.00 4.12
125 126 1.404477 GTGCGGTTTCATTCGTTTGG 58.596 50.000 0.00 0.00 0.00 3.28
126 127 1.041726 CGTGCGGTTTCATTCGTTTG 58.958 50.000 0.00 0.00 0.00 2.93
127 128 0.938713 TCGTGCGGTTTCATTCGTTT 59.061 45.000 0.00 0.00 0.00 3.60
128 129 1.153353 ATCGTGCGGTTTCATTCGTT 58.847 45.000 0.00 0.00 0.00 3.85
129 130 1.153353 AATCGTGCGGTTTCATTCGT 58.847 45.000 0.00 0.00 0.00 3.85
130 131 1.904412 CAAATCGTGCGGTTTCATTCG 59.096 47.619 0.00 0.00 0.00 3.34
131 132 2.095466 TCCAAATCGTGCGGTTTCATTC 60.095 45.455 0.00 0.00 0.00 2.67
132 133 1.883275 TCCAAATCGTGCGGTTTCATT 59.117 42.857 0.00 0.00 0.00 2.57
133 134 1.468520 CTCCAAATCGTGCGGTTTCAT 59.531 47.619 0.00 0.00 0.00 2.57
134 135 0.871722 CTCCAAATCGTGCGGTTTCA 59.128 50.000 0.00 0.00 0.00 2.69
135 136 0.872388 ACTCCAAATCGTGCGGTTTC 59.128 50.000 0.00 0.00 0.00 2.78
136 137 0.872388 GACTCCAAATCGTGCGGTTT 59.128 50.000 0.00 0.00 0.00 3.27
137 138 0.034896 AGACTCCAAATCGTGCGGTT 59.965 50.000 0.00 0.00 0.00 4.44
138 139 0.892755 TAGACTCCAAATCGTGCGGT 59.107 50.000 0.00 0.00 0.00 5.68
139 140 1.560923 CTAGACTCCAAATCGTGCGG 58.439 55.000 0.00 0.00 0.00 5.69
140 141 0.924090 GCTAGACTCCAAATCGTGCG 59.076 55.000 0.00 0.00 0.00 5.34
141 142 0.924090 CGCTAGACTCCAAATCGTGC 59.076 55.000 0.00 0.00 0.00 5.34
142 143 2.279582 ACGCTAGACTCCAAATCGTG 57.720 50.000 0.00 0.00 0.00 4.35
143 144 2.607187 CAACGCTAGACTCCAAATCGT 58.393 47.619 0.00 0.00 0.00 3.73
144 145 1.927174 CCAACGCTAGACTCCAAATCG 59.073 52.381 0.00 0.00 0.00 3.34
145 146 3.247006 TCCAACGCTAGACTCCAAATC 57.753 47.619 0.00 0.00 0.00 2.17
146 147 3.535561 CATCCAACGCTAGACTCCAAAT 58.464 45.455 0.00 0.00 0.00 2.32
147 148 2.935238 GCATCCAACGCTAGACTCCAAA 60.935 50.000 0.00 0.00 0.00 3.28
148 149 1.405526 GCATCCAACGCTAGACTCCAA 60.406 52.381 0.00 0.00 0.00 3.53
149 150 0.175760 GCATCCAACGCTAGACTCCA 59.824 55.000 0.00 0.00 0.00 3.86
150 151 0.175760 TGCATCCAACGCTAGACTCC 59.824 55.000 0.00 0.00 0.00 3.85
151 152 1.565305 CTGCATCCAACGCTAGACTC 58.435 55.000 0.00 0.00 0.00 3.36
152 153 0.460987 GCTGCATCCAACGCTAGACT 60.461 55.000 0.00 0.00 0.00 3.24
153 154 1.756375 CGCTGCATCCAACGCTAGAC 61.756 60.000 0.00 0.00 0.00 2.59
154 155 1.519234 CGCTGCATCCAACGCTAGA 60.519 57.895 0.00 0.00 0.00 2.43
155 156 1.756375 GACGCTGCATCCAACGCTAG 61.756 60.000 0.00 0.00 34.05 3.42
156 157 1.809619 GACGCTGCATCCAACGCTA 60.810 57.895 0.00 0.00 34.05 4.26
157 158 3.121030 GACGCTGCATCCAACGCT 61.121 61.111 0.00 0.00 34.05 5.07
158 159 2.187599 AAAGACGCTGCATCCAACGC 62.188 55.000 0.00 0.00 34.05 4.84
159 160 0.453282 CAAAGACGCTGCATCCAACG 60.453 55.000 0.00 0.00 36.65 4.10
160 161 0.593128 ACAAAGACGCTGCATCCAAC 59.407 50.000 0.00 0.00 0.00 3.77
161 162 2.177394 TACAAAGACGCTGCATCCAA 57.823 45.000 0.00 0.00 0.00 3.53
162 163 2.177394 TTACAAAGACGCTGCATCCA 57.823 45.000 0.00 0.00 0.00 3.41
163 164 2.484264 ACTTTACAAAGACGCTGCATCC 59.516 45.455 8.65 0.00 39.31 3.51
164 165 3.433615 AGACTTTACAAAGACGCTGCATC 59.566 43.478 8.65 0.00 39.31 3.91
165 166 3.403038 AGACTTTACAAAGACGCTGCAT 58.597 40.909 8.65 0.00 39.31 3.96
166 167 2.833794 AGACTTTACAAAGACGCTGCA 58.166 42.857 8.65 0.00 39.31 4.41
167 168 3.988517 ACTAGACTTTACAAAGACGCTGC 59.011 43.478 8.65 0.00 39.31 5.25
168 169 6.526566 AAACTAGACTTTACAAAGACGCTG 57.473 37.500 8.65 2.00 39.31 5.18
169 170 6.202379 GGAAAACTAGACTTTACAAAGACGCT 59.798 38.462 8.65 5.53 39.31 5.07
170 171 6.202379 AGGAAAACTAGACTTTACAAAGACGC 59.798 38.462 8.65 0.00 39.31 5.19
171 172 7.710766 AGGAAAACTAGACTTTACAAAGACG 57.289 36.000 8.65 0.00 39.31 4.18
193 194 6.542370 ACAATTGATTACTCCATCCGTAAAGG 59.458 38.462 13.59 0.00 42.97 3.11
194 195 7.553881 ACAATTGATTACTCCATCCGTAAAG 57.446 36.000 13.59 0.00 31.36 1.85
195 196 7.827236 AGAACAATTGATTACTCCATCCGTAAA 59.173 33.333 13.59 0.00 31.36 2.01
196 197 7.335627 AGAACAATTGATTACTCCATCCGTAA 58.664 34.615 13.59 0.00 0.00 3.18
197 198 6.884832 AGAACAATTGATTACTCCATCCGTA 58.115 36.000 13.59 0.00 0.00 4.02
198 199 5.745227 AGAACAATTGATTACTCCATCCGT 58.255 37.500 13.59 0.00 0.00 4.69
199 200 6.683974 AAGAACAATTGATTACTCCATCCG 57.316 37.500 13.59 0.00 0.00 4.18
256 257 4.002256 ACTCCTCCCCCTTTTTGAAAAA 57.998 40.909 2.83 2.83 0.00 1.94
257 258 3.699025 ACTCCTCCCCCTTTTTGAAAA 57.301 42.857 0.00 0.00 0.00 2.29
258 259 3.699025 AACTCCTCCCCCTTTTTGAAA 57.301 42.857 0.00 0.00 0.00 2.69
259 260 3.699025 AAACTCCTCCCCCTTTTTGAA 57.301 42.857 0.00 0.00 0.00 2.69
260 261 3.206639 AGAAAACTCCTCCCCCTTTTTGA 59.793 43.478 0.00 0.00 0.00 2.69
261 262 3.321968 CAGAAAACTCCTCCCCCTTTTTG 59.678 47.826 0.00 0.00 0.00 2.44
262 263 3.052109 ACAGAAAACTCCTCCCCCTTTTT 60.052 43.478 0.00 0.00 0.00 1.94
263 264 2.518407 ACAGAAAACTCCTCCCCCTTTT 59.482 45.455 0.00 0.00 0.00 2.27
264 265 2.144450 ACAGAAAACTCCTCCCCCTTT 58.856 47.619 0.00 0.00 0.00 3.11
265 266 1.834540 ACAGAAAACTCCTCCCCCTT 58.165 50.000 0.00 0.00 0.00 3.95
266 267 2.735259 TACAGAAAACTCCTCCCCCT 57.265 50.000 0.00 0.00 0.00 4.79
267 268 5.648330 ATATTACAGAAAACTCCTCCCCC 57.352 43.478 0.00 0.00 0.00 5.40
320 321 8.149647 GCACATCCCATTGGAAATCAAATTATA 58.850 33.333 3.62 0.00 45.98 0.98
321 322 6.993902 GCACATCCCATTGGAAATCAAATTAT 59.006 34.615 3.62 0.00 45.98 1.28
322 323 6.070366 TGCACATCCCATTGGAAATCAAATTA 60.070 34.615 3.62 0.00 45.98 1.40
323 324 5.187687 GCACATCCCATTGGAAATCAAATT 58.812 37.500 3.62 0.00 45.98 1.82
324 325 4.225492 TGCACATCCCATTGGAAATCAAAT 59.775 37.500 3.62 0.00 45.98 2.32
347 348 5.536916 TCGAAATGTTGGTTAAAGTCCCATT 59.463 36.000 0.00 0.00 0.00 3.16
351 352 7.650104 TGAAATTCGAAATGTTGGTTAAAGTCC 59.350 33.333 0.00 0.00 0.00 3.85
357 358 8.879342 ACAAATGAAATTCGAAATGTTGGTTA 57.121 26.923 0.00 0.00 33.67 2.85
362 363 9.474920 ACACATACAAATGAAATTCGAAATGTT 57.525 25.926 0.00 0.00 33.67 2.71
368 369 9.388346 GTTACAACACATACAAATGAAATTCGA 57.612 29.630 0.00 0.00 33.67 3.71
369 370 9.175060 TGTTACAACACATACAAATGAAATTCG 57.825 29.630 0.00 0.00 36.54 3.34
372 373 9.979578 ACATGTTACAACACATACAAATGAAAT 57.020 25.926 0.00 0.00 42.51 2.17
373 374 9.457110 GACATGTTACAACACATACAAATGAAA 57.543 29.630 0.00 0.00 42.51 2.69
374 375 8.624776 TGACATGTTACAACACATACAAATGAA 58.375 29.630 0.00 0.00 42.51 2.57
375 376 8.159344 TGACATGTTACAACACATACAAATGA 57.841 30.769 0.00 0.00 42.51 2.57
376 377 8.852380 CATGACATGTTACAACACATACAAATG 58.148 33.333 7.31 0.00 42.51 2.32
400 401 4.574674 ACATATGCCCGGATATCAACAT 57.425 40.909 0.73 4.89 0.00 2.71
411 412 3.494626 CACTAGCAAGTTACATATGCCCG 59.505 47.826 1.58 0.42 40.93 6.13
417 418 7.891498 TGTAGATCCACTAGCAAGTTACATA 57.109 36.000 0.00 0.00 31.97 2.29
483 485 6.260493 CCATCTCTCCTCTTTTTAGCATTCTG 59.740 42.308 0.00 0.00 0.00 3.02
566 568 8.860128 GTTCTTTTCTCCTTAGTTTTGTTGTTG 58.140 33.333 0.00 0.00 0.00 3.33
612 619 8.031277 CCTAAAGCAGTAAAGCAAATTTGATCT 58.969 33.333 22.31 4.74 36.85 2.75
613 620 7.201470 GCCTAAAGCAGTAAAGCAAATTTGATC 60.201 37.037 22.31 3.94 42.97 2.92
638 645 2.002586 ACAGTGATACACGCATCTTGC 58.997 47.619 0.00 0.00 39.64 4.01
656 670 1.790755 CTTGATTTGACCGTCCGACA 58.209 50.000 0.00 0.00 0.00 4.35
661 675 1.087501 GGGAGCTTGATTTGACCGTC 58.912 55.000 0.00 0.00 0.00 4.79
673 687 6.916360 TTTGTGATCTAATTTTGGGAGCTT 57.084 33.333 0.00 0.00 0.00 3.74
695 709 7.745620 ATCTAGAAAGTTGTTCCATTCGTTT 57.254 32.000 0.00 0.00 0.00 3.60
772 787 4.555262 CTTGTACCCCGTAAAACGACTAA 58.445 43.478 0.15 0.00 46.05 2.24
796 814 1.409521 GGCATACACTGTTGGCCCATA 60.410 52.381 0.00 0.00 38.70 2.74
880 899 1.279558 GTTTCTCTCTGGAAGACCCCC 59.720 57.143 0.00 0.00 38.67 5.40
881 900 1.978580 TGTTTCTCTCTGGAAGACCCC 59.021 52.381 0.00 0.00 38.67 4.95
1395 1418 0.038618 CGGTGATGACCACGTCTTCA 60.039 55.000 1.19 6.34 46.62 3.02
1398 1421 2.970639 CCGGTGATGACCACGTCT 59.029 61.111 1.19 0.00 46.62 4.18
1464 1487 3.637273 GACCACGGCCCCTTCACT 61.637 66.667 0.00 0.00 0.00 3.41
1734 1757 6.075099 CCTTACACGTTGCATTACAAAACAAG 60.075 38.462 0.00 0.00 40.82 3.16
1957 1982 0.768622 TGTCGGTTCTCCCAACCAAT 59.231 50.000 4.46 0.00 40.28 3.16
2056 2081 3.640967 ACATCTCTCTCATAGGTTGCTCC 59.359 47.826 0.00 0.00 0.00 4.70
2113 2138 1.893801 ACACTGAAGGAACTAGGACCG 59.106 52.381 0.00 0.00 38.49 4.79
2298 2323 5.856156 ACATTTCCATTTGCATCTGTTGAA 58.144 33.333 0.00 0.00 0.00 2.69
2738 2763 6.006275 AGTAACACATGCCTTGGAATCTAT 57.994 37.500 0.00 0.00 0.00 1.98
2782 2807 6.017192 ACTAAGGACCTGTGAGAAGTATGAA 58.983 40.000 0.00 0.00 0.00 2.57
2793 2818 4.471904 TGAGCAATACTAAGGACCTGTG 57.528 45.455 0.00 0.00 0.00 3.66
2806 2831 4.095334 GTGATGCAGTGTGAATGAGCAATA 59.905 41.667 0.00 0.00 38.85 1.90
2809 2834 1.808343 GTGATGCAGTGTGAATGAGCA 59.192 47.619 0.00 0.00 39.79 4.26
2832 2857 4.122776 CAATCACATCCAGCTACCTACAC 58.877 47.826 0.00 0.00 0.00 2.90
2868 2893 4.142534 GGAACGCAATTAGTTTTAGGGTCC 60.143 45.833 0.84 0.00 31.14 4.46
2869 2894 4.456566 TGGAACGCAATTAGTTTTAGGGTC 59.543 41.667 0.84 0.00 31.14 4.46
2909 2934 3.884693 CAGGTGTATAATTGGCAGCATGA 59.115 43.478 0.00 0.00 39.69 3.07
2930 2955 2.419574 GGGAGTCTAAGTATTTGGCGCA 60.420 50.000 10.83 0.00 28.70 6.09
2941 2966 7.554476 CAGGAAAAAGGAAATAGGGAGTCTAAG 59.446 40.741 0.00 0.00 0.00 2.18
2943 2968 6.069615 CCAGGAAAAAGGAAATAGGGAGTCTA 60.070 42.308 0.00 0.00 0.00 2.59
2952 2977 4.323409 GCCATTGCCAGGAAAAAGGAAATA 60.323 41.667 6.25 0.00 31.16 1.40
2987 3012 8.387190 TGTGATAGCTTCATCATAGGAAAATG 57.613 34.615 2.56 0.00 37.28 2.32
3008 3033 6.945435 TCTATTCCATTAAGCCAAACTTGTGA 59.055 34.615 0.00 0.00 39.58 3.58
3022 3049 9.743057 CGCAAAATATTTTGGTCTATTCCATTA 57.257 29.630 31.89 0.00 45.73 1.90
3026 3053 7.432252 CACTCGCAAAATATTTTGGTCTATTCC 59.568 37.037 31.89 17.25 45.73 3.01
3027 3054 8.181573 TCACTCGCAAAATATTTTGGTCTATTC 58.818 33.333 31.89 17.81 45.73 1.75
3044 3071 5.065090 CCTTACATGATCAATTCACTCGCAA 59.935 40.000 0.00 0.00 37.11 4.85
3045 3072 4.571984 CCTTACATGATCAATTCACTCGCA 59.428 41.667 0.00 0.00 37.11 5.10
3046 3073 4.024556 CCCTTACATGATCAATTCACTCGC 60.025 45.833 0.00 0.00 37.11 5.03
3047 3074 5.359756 TCCCTTACATGATCAATTCACTCG 58.640 41.667 0.00 0.00 37.11 4.18
3048 3075 6.599244 TGTTCCCTTACATGATCAATTCACTC 59.401 38.462 0.00 0.00 37.11 3.51
3063 3090 7.364970 ACGTATTTCAACATTTGTTCCCTTAC 58.635 34.615 0.00 0.00 35.83 2.34
3074 3101 7.702772 TGCTACAAACAAACGTATTTCAACATT 59.297 29.630 0.00 0.00 0.00 2.71
3078 3105 6.197468 GCTTGCTACAAACAAACGTATTTCAA 59.803 34.615 0.00 0.00 0.00 2.69
3079 3106 5.683743 GCTTGCTACAAACAAACGTATTTCA 59.316 36.000 0.00 0.00 0.00 2.69
3082 3109 5.176407 TGCTTGCTACAAACAAACGTATT 57.824 34.783 0.00 0.00 0.00 1.89
3104 3131 9.965902 GGGATCTAATTATGACCAATCACTTAT 57.034 33.333 0.00 0.00 37.79 1.73
3120 3147 4.446371 CTTCAGTTCGCTGGGATCTAATT 58.554 43.478 5.16 0.00 45.04 1.40
3127 3154 0.973632 TAAGCTTCAGTTCGCTGGGA 59.026 50.000 0.00 0.00 45.04 4.37
3134 3161 9.899226 AAGACAACAATAATTAAGCTTCAGTTC 57.101 29.630 0.00 0.00 0.00 3.01
3153 3180 8.190122 TCAATGATGGTTAATATGCAAGACAAC 58.810 33.333 0.00 0.00 0.00 3.32
3203 3230 9.838339 CAGGTGGATCTACTTATTCAATTACTT 57.162 33.333 9.27 0.00 0.00 2.24
3204 3231 8.993424 ACAGGTGGATCTACTTATTCAATTACT 58.007 33.333 9.27 0.00 0.00 2.24
3225 3252 2.032680 AAAGTGCACACGTAACAGGT 57.967 45.000 21.04 0.00 36.20 4.00
3244 3272 6.157994 AGGACTGCTGGGTAATAAATGAACTA 59.842 38.462 0.00 0.00 0.00 2.24
3273 3301 8.895845 CACGTGTTCGGTTAATAGTACATATAC 58.104 37.037 7.58 0.00 41.85 1.47
3301 3342 4.003788 CCCTCCCGAACGTGCACT 62.004 66.667 16.19 0.00 0.00 4.40
3323 3364 2.864946 CTCCTTCTGAATCATGCTGACG 59.135 50.000 0.00 0.00 0.00 4.35
3327 3368 1.562942 TGGCTCCTTCTGAATCATGCT 59.437 47.619 0.00 0.00 0.00 3.79
3336 3377 0.682209 CCCACCATTGGCTCCTTCTG 60.682 60.000 1.54 0.00 42.35 3.02
3342 3383 2.418609 GCAATTTACCCACCATTGGCTC 60.419 50.000 1.54 0.00 42.35 4.70
3345 3386 2.677613 GCTGCAATTTACCCACCATTGG 60.678 50.000 0.00 0.00 43.50 3.16
3348 3389 1.935799 TGCTGCAATTTACCCACCAT 58.064 45.000 0.00 0.00 0.00 3.55
3356 3397 4.301072 ACCCTAGACTTGCTGCAATTTA 57.699 40.909 16.38 7.80 0.00 1.40
3357 3398 3.160679 ACCCTAGACTTGCTGCAATTT 57.839 42.857 16.38 5.92 0.00 1.82
3358 3399 2.887151 ACCCTAGACTTGCTGCAATT 57.113 45.000 16.38 10.54 0.00 2.32
3359 3400 4.510167 AATACCCTAGACTTGCTGCAAT 57.490 40.909 16.38 6.29 0.00 3.56
3360 3401 4.141711 CCTAATACCCTAGACTTGCTGCAA 60.142 45.833 15.16 15.16 0.00 4.08
3361 3402 3.388024 CCTAATACCCTAGACTTGCTGCA 59.612 47.826 0.00 0.00 0.00 4.41
3362 3403 3.388350 ACCTAATACCCTAGACTTGCTGC 59.612 47.826 0.00 0.00 0.00 5.25
3363 3404 4.406003 ACACCTAATACCCTAGACTTGCTG 59.594 45.833 0.00 0.00 0.00 4.41
3364 3405 4.406003 CACACCTAATACCCTAGACTTGCT 59.594 45.833 0.00 0.00 0.00 3.91
3365 3406 4.161754 ACACACCTAATACCCTAGACTTGC 59.838 45.833 0.00 0.00 0.00 4.01
3366 3407 5.934402 ACACACCTAATACCCTAGACTTG 57.066 43.478 0.00 0.00 0.00 3.16
3367 3408 5.783875 ACAACACACCTAATACCCTAGACTT 59.216 40.000 0.00 0.00 0.00 3.01
3368 3409 5.187186 CACAACACACCTAATACCCTAGACT 59.813 44.000 0.00 0.00 0.00 3.24
3369 3410 5.416947 CACAACACACCTAATACCCTAGAC 58.583 45.833 0.00 0.00 0.00 2.59
3370 3411 4.081309 GCACAACACACCTAATACCCTAGA 60.081 45.833 0.00 0.00 0.00 2.43
3371 3412 4.081087 AGCACAACACACCTAATACCCTAG 60.081 45.833 0.00 0.00 0.00 3.02
3372 3413 3.841845 AGCACAACACACCTAATACCCTA 59.158 43.478 0.00 0.00 0.00 3.53
3373 3414 2.642807 AGCACAACACACCTAATACCCT 59.357 45.455 0.00 0.00 0.00 4.34
3374 3415 2.747446 CAGCACAACACACCTAATACCC 59.253 50.000 0.00 0.00 0.00 3.69
3375 3416 3.188460 CACAGCACAACACACCTAATACC 59.812 47.826 0.00 0.00 0.00 2.73
3376 3417 3.364964 GCACAGCACAACACACCTAATAC 60.365 47.826 0.00 0.00 0.00 1.89
3377 3418 2.811431 GCACAGCACAACACACCTAATA 59.189 45.455 0.00 0.00 0.00 0.98
3378 3419 1.608590 GCACAGCACAACACACCTAAT 59.391 47.619 0.00 0.00 0.00 1.73
3379 3420 1.021202 GCACAGCACAACACACCTAA 58.979 50.000 0.00 0.00 0.00 2.69
3380 3421 0.107459 TGCACAGCACAACACACCTA 60.107 50.000 0.00 0.00 31.71 3.08
3381 3422 0.964860 TTGCACAGCACAACACACCT 60.965 50.000 0.00 0.00 38.71 4.00
3382 3423 0.108898 TTTGCACAGCACAACACACC 60.109 50.000 0.00 0.00 38.71 4.16
3383 3424 1.389784 GTTTTGCACAGCACAACACAC 59.610 47.619 14.13 0.00 45.12 3.82
3384 3425 1.707632 GTTTTGCACAGCACAACACA 58.292 45.000 14.13 0.00 45.12 3.72
3387 3428 1.593933 CCATGTTTTGCACAGCACAAC 59.406 47.619 12.60 12.60 45.72 3.32
3388 3429 1.479730 TCCATGTTTTGCACAGCACAA 59.520 42.857 0.00 0.00 39.40 3.33
3389 3430 1.109609 TCCATGTTTTGCACAGCACA 58.890 45.000 0.00 0.00 39.40 4.57
3390 3431 2.222007 TTCCATGTTTTGCACAGCAC 57.778 45.000 0.00 0.00 39.40 4.40
3391 3432 2.364647 TGATTCCATGTTTTGCACAGCA 59.635 40.909 0.00 0.00 39.40 4.41
3392 3433 3.029320 TGATTCCATGTTTTGCACAGC 57.971 42.857 0.00 0.00 39.40 4.40
3393 3434 5.347635 CAGATTGATTCCATGTTTTGCACAG 59.652 40.000 0.00 0.00 39.40 3.66
3394 3435 5.231702 CAGATTGATTCCATGTTTTGCACA 58.768 37.500 0.00 0.00 40.71 4.57
3395 3436 4.628333 CCAGATTGATTCCATGTTTTGCAC 59.372 41.667 0.00 0.00 0.00 4.57
3396 3437 4.283978 ACCAGATTGATTCCATGTTTTGCA 59.716 37.500 0.00 0.00 0.00 4.08
3397 3438 4.824289 ACCAGATTGATTCCATGTTTTGC 58.176 39.130 0.00 0.00 0.00 3.68
3398 3439 5.413499 GGACCAGATTGATTCCATGTTTTG 58.587 41.667 0.00 0.00 0.00 2.44
3399 3440 4.158394 CGGACCAGATTGATTCCATGTTTT 59.842 41.667 0.00 0.00 0.00 2.43
3400 3441 3.696051 CGGACCAGATTGATTCCATGTTT 59.304 43.478 0.00 0.00 0.00 2.83
3401 3442 3.282021 CGGACCAGATTGATTCCATGTT 58.718 45.455 0.00 0.00 0.00 2.71
3402 3443 2.923121 CGGACCAGATTGATTCCATGT 58.077 47.619 0.00 0.00 0.00 3.21
3403 3444 1.605710 GCGGACCAGATTGATTCCATG 59.394 52.381 0.00 0.00 0.00 3.66
3404 3445 1.477558 GGCGGACCAGATTGATTCCAT 60.478 52.381 0.00 0.00 35.26 3.41
3405 3446 0.107214 GGCGGACCAGATTGATTCCA 60.107 55.000 0.00 0.00 35.26 3.53
3406 3447 0.107214 TGGCGGACCAGATTGATTCC 60.107 55.000 0.00 0.00 42.67 3.01
3407 3448 3.476740 TGGCGGACCAGATTGATTC 57.523 52.632 0.00 0.00 42.67 2.52
3424 3465 3.211865 ACAGCTCAACCATCTGCATATG 58.788 45.455 5.12 5.12 0.00 1.78
3425 3466 3.572632 ACAGCTCAACCATCTGCATAT 57.427 42.857 0.00 0.00 0.00 1.78
3426 3467 3.354948 AACAGCTCAACCATCTGCATA 57.645 42.857 0.00 0.00 0.00 3.14
3427 3468 2.211250 AACAGCTCAACCATCTGCAT 57.789 45.000 0.00 0.00 0.00 3.96
3428 3469 2.616256 CCTAACAGCTCAACCATCTGCA 60.616 50.000 0.00 0.00 0.00 4.41
3429 3470 2.012673 CCTAACAGCTCAACCATCTGC 58.987 52.381 0.00 0.00 0.00 4.26
3430 3471 3.529533 CTCCTAACAGCTCAACCATCTG 58.470 50.000 0.00 0.00 0.00 2.90
3431 3472 2.503356 CCTCCTAACAGCTCAACCATCT 59.497 50.000 0.00 0.00 0.00 2.90
3432 3473 2.501723 TCCTCCTAACAGCTCAACCATC 59.498 50.000 0.00 0.00 0.00 3.51
3433 3474 2.551270 TCCTCCTAACAGCTCAACCAT 58.449 47.619 0.00 0.00 0.00 3.55
3434 3475 2.024176 TCCTCCTAACAGCTCAACCA 57.976 50.000 0.00 0.00 0.00 3.67
3435 3476 3.636153 AATCCTCCTAACAGCTCAACC 57.364 47.619 0.00 0.00 0.00 3.77
3436 3477 3.691609 CCAAATCCTCCTAACAGCTCAAC 59.308 47.826 0.00 0.00 0.00 3.18
3437 3478 3.587061 TCCAAATCCTCCTAACAGCTCAA 59.413 43.478 0.00 0.00 0.00 3.02
3438 3479 3.181329 TCCAAATCCTCCTAACAGCTCA 58.819 45.455 0.00 0.00 0.00 4.26
3439 3480 3.914426 TCCAAATCCTCCTAACAGCTC 57.086 47.619 0.00 0.00 0.00 4.09
3440 3481 3.782523 TGATCCAAATCCTCCTAACAGCT 59.217 43.478 0.00 0.00 0.00 4.24
3441 3482 4.133078 CTGATCCAAATCCTCCTAACAGC 58.867 47.826 0.00 0.00 0.00 4.40
3442 3483 4.133078 GCTGATCCAAATCCTCCTAACAG 58.867 47.826 0.00 0.00 0.00 3.16
3443 3484 3.117888 GGCTGATCCAAATCCTCCTAACA 60.118 47.826 0.00 0.00 34.01 2.41
3444 3485 3.117888 TGGCTGATCCAAATCCTCCTAAC 60.118 47.826 0.00 0.00 43.21 2.34
3445 3486 3.122480 TGGCTGATCCAAATCCTCCTAA 58.878 45.455 0.00 0.00 43.21 2.69
3446 3487 2.775418 TGGCTGATCCAAATCCTCCTA 58.225 47.619 0.00 0.00 43.21 2.94
3447 3488 1.600058 TGGCTGATCCAAATCCTCCT 58.400 50.000 0.00 0.00 43.21 3.69
3456 3497 2.981302 CCAGACGTGGCTGATCCA 59.019 61.111 3.76 0.00 44.18 3.41
3489 3530 9.515226 GCCTACCACAATAAAATATCTCCATTA 57.485 33.333 0.00 0.00 0.00 1.90
3490 3531 7.174946 CGCCTACCACAATAAAATATCTCCATT 59.825 37.037 0.00 0.00 0.00 3.16
3491 3532 6.655003 CGCCTACCACAATAAAATATCTCCAT 59.345 38.462 0.00 0.00 0.00 3.41
3492 3533 5.995282 CGCCTACCACAATAAAATATCTCCA 59.005 40.000 0.00 0.00 0.00 3.86
3493 3534 5.995897 ACGCCTACCACAATAAAATATCTCC 59.004 40.000 0.00 0.00 0.00 3.71
3494 3535 6.929606 AGACGCCTACCACAATAAAATATCTC 59.070 38.462 0.00 0.00 0.00 2.75
3495 3536 6.827727 AGACGCCTACCACAATAAAATATCT 58.172 36.000 0.00 0.00 0.00 1.98
3496 3537 7.307811 GGAAGACGCCTACCACAATAAAATATC 60.308 40.741 0.00 0.00 0.00 1.63
3497 3538 6.485648 GGAAGACGCCTACCACAATAAAATAT 59.514 38.462 0.00 0.00 0.00 1.28
3498 3539 5.818857 GGAAGACGCCTACCACAATAAAATA 59.181 40.000 0.00 0.00 0.00 1.40
3499 3540 4.638865 GGAAGACGCCTACCACAATAAAAT 59.361 41.667 0.00 0.00 0.00 1.82
3500 3541 4.004982 GGAAGACGCCTACCACAATAAAA 58.995 43.478 0.00 0.00 0.00 1.52
3501 3542 3.602483 GGAAGACGCCTACCACAATAAA 58.398 45.455 0.00 0.00 0.00 1.40
3502 3543 2.093341 GGGAAGACGCCTACCACAATAA 60.093 50.000 0.00 0.00 0.00 1.40
3503 3544 1.483415 GGGAAGACGCCTACCACAATA 59.517 52.381 0.00 0.00 0.00 1.90
3504 3545 0.252197 GGGAAGACGCCTACCACAAT 59.748 55.000 0.00 0.00 0.00 2.71
3505 3546 1.122632 TGGGAAGACGCCTACCACAA 61.123 55.000 0.00 0.00 0.00 3.33
3506 3547 0.907704 ATGGGAAGACGCCTACCACA 60.908 55.000 0.00 0.00 33.97 4.17
3507 3548 1.117150 TATGGGAAGACGCCTACCAC 58.883 55.000 0.00 0.00 33.97 4.16
3508 3549 1.868713 TTATGGGAAGACGCCTACCA 58.131 50.000 0.00 0.00 35.11 3.25
3509 3550 4.222145 TGATATTATGGGAAGACGCCTACC 59.778 45.833 0.00 0.00 0.00 3.18
3510 3551 5.047235 ACTGATATTATGGGAAGACGCCTAC 60.047 44.000 0.00 0.00 0.00 3.18
3511 3552 5.047306 CACTGATATTATGGGAAGACGCCTA 60.047 44.000 0.00 0.00 0.00 3.93
3512 3553 3.904339 ACTGATATTATGGGAAGACGCCT 59.096 43.478 0.00 0.00 0.00 5.52
3513 3554 3.997021 CACTGATATTATGGGAAGACGCC 59.003 47.826 0.00 0.00 0.00 5.68
3514 3555 4.449068 CACACTGATATTATGGGAAGACGC 59.551 45.833 0.00 0.00 0.00 5.19
3515 3556 5.601662 ACACACTGATATTATGGGAAGACG 58.398 41.667 0.00 0.00 0.00 4.18
3516 3557 7.275920 AGAACACACTGATATTATGGGAAGAC 58.724 38.462 0.00 0.00 0.00 3.01
3517 3558 7.437713 AGAACACACTGATATTATGGGAAGA 57.562 36.000 0.00 0.00 0.00 2.87
3518 3559 8.424918 ACTAGAACACACTGATATTATGGGAAG 58.575 37.037 0.00 0.00 0.00 3.46
3519 3560 8.319057 ACTAGAACACACTGATATTATGGGAA 57.681 34.615 0.00 0.00 0.00 3.97
3520 3561 7.914427 ACTAGAACACACTGATATTATGGGA 57.086 36.000 0.00 0.00 0.00 4.37
3527 3568 8.291032 GCTCGTTATACTAGAACACACTGATAT 58.709 37.037 0.00 0.00 0.00 1.63
3528 3569 7.517893 CGCTCGTTATACTAGAACACACTGATA 60.518 40.741 0.00 0.00 0.00 2.15
3529 3570 6.496571 GCTCGTTATACTAGAACACACTGAT 58.503 40.000 0.00 0.00 0.00 2.90
3530 3571 5.446875 CGCTCGTTATACTAGAACACACTGA 60.447 44.000 0.00 0.00 0.00 3.41
3531 3572 4.729086 CGCTCGTTATACTAGAACACACTG 59.271 45.833 0.00 0.00 0.00 3.66
3532 3573 4.633126 TCGCTCGTTATACTAGAACACACT 59.367 41.667 0.00 0.00 0.00 3.55
3533 3574 4.901814 TCGCTCGTTATACTAGAACACAC 58.098 43.478 0.00 0.00 0.00 3.82
3534 3575 5.106594 TGTTCGCTCGTTATACTAGAACACA 60.107 40.000 0.00 0.00 40.68 3.72
3535 3576 5.327091 TGTTCGCTCGTTATACTAGAACAC 58.673 41.667 0.00 0.00 40.68 3.32
3536 3577 5.550232 TGTTCGCTCGTTATACTAGAACA 57.450 39.130 0.00 4.30 42.47 3.18
3537 3578 7.641411 TGTAATGTTCGCTCGTTATACTAGAAC 59.359 37.037 0.00 0.00 37.56 3.01
3538 3579 7.696755 TGTAATGTTCGCTCGTTATACTAGAA 58.303 34.615 0.00 0.00 0.00 2.10
3539 3580 7.250445 TGTAATGTTCGCTCGTTATACTAGA 57.750 36.000 0.00 0.00 0.00 2.43
3540 3581 7.801783 TCATGTAATGTTCGCTCGTTATACTAG 59.198 37.037 0.00 0.00 46.80 2.57
3541 3582 7.641760 TCATGTAATGTTCGCTCGTTATACTA 58.358 34.615 0.00 0.00 46.80 1.82
3542 3583 6.500910 TCATGTAATGTTCGCTCGTTATACT 58.499 36.000 0.00 0.00 46.80 2.12
3543 3584 6.742999 TCATGTAATGTTCGCTCGTTATAC 57.257 37.500 0.00 0.00 46.80 1.47
3544 3585 6.921307 ACATCATGTAATGTTCGCTCGTTATA 59.079 34.615 0.00 0.00 46.80 0.98
3545 3586 5.753438 ACATCATGTAATGTTCGCTCGTTAT 59.247 36.000 0.00 0.00 46.80 1.89
3546 3587 5.005299 CACATCATGTAATGTTCGCTCGTTA 59.995 40.000 0.00 0.00 46.80 3.18
3547 3588 3.932710 ACATCATGTAATGTTCGCTCGTT 59.067 39.130 0.00 0.00 46.80 3.85
3548 3589 3.306973 CACATCATGTAATGTTCGCTCGT 59.693 43.478 0.00 0.00 46.80 4.18
3549 3590 3.306973 ACACATCATGTAATGTTCGCTCG 59.693 43.478 0.00 0.00 46.80 5.03
3550 3591 4.568359 AGACACATCATGTAATGTTCGCTC 59.432 41.667 0.00 0.00 46.80 5.03
3551 3592 4.507710 AGACACATCATGTAATGTTCGCT 58.492 39.130 0.00 0.00 46.80 4.93
3552 3593 4.864916 AGACACATCATGTAATGTTCGC 57.135 40.909 0.00 0.00 46.80 4.70
3553 3594 7.347448 CCATAAGACACATCATGTAATGTTCG 58.653 38.462 0.00 0.00 46.80 3.95
3554 3595 7.134815 GCCATAAGACACATCATGTAATGTTC 58.865 38.462 0.00 1.22 46.80 3.18
3555 3596 6.238456 CGCCATAAGACACATCATGTAATGTT 60.238 38.462 0.00 0.00 46.80 2.71
3556 3597 5.237127 CGCCATAAGACACATCATGTAATGT 59.763 40.000 0.00 0.00 46.80 2.71
3558 3599 5.237127 CACGCCATAAGACACATCATGTAAT 59.763 40.000 0.00 0.00 43.56 1.89
3559 3600 4.570369 CACGCCATAAGACACATCATGTAA 59.430 41.667 0.00 0.00 43.56 2.41
3560 3601 4.119136 CACGCCATAAGACACATCATGTA 58.881 43.478 0.00 0.00 43.56 2.29
3562 3603 3.197265 TCACGCCATAAGACACATCATG 58.803 45.455 0.00 0.00 0.00 3.07
3563 3604 3.541996 TCACGCCATAAGACACATCAT 57.458 42.857 0.00 0.00 0.00 2.45
3564 3605 3.197265 CATCACGCCATAAGACACATCA 58.803 45.455 0.00 0.00 0.00 3.07
3565 3606 3.198068 ACATCACGCCATAAGACACATC 58.802 45.455 0.00 0.00 0.00 3.06
3566 3607 3.198068 GACATCACGCCATAAGACACAT 58.802 45.455 0.00 0.00 0.00 3.21
3567 3608 2.616960 GACATCACGCCATAAGACACA 58.383 47.619 0.00 0.00 0.00 3.72
3568 3609 1.933853 GGACATCACGCCATAAGACAC 59.066 52.381 0.00 0.00 0.00 3.67
3569 3610 1.831106 AGGACATCACGCCATAAGACA 59.169 47.619 0.00 0.00 0.00 3.41
3570 3611 2.205074 CAGGACATCACGCCATAAGAC 58.795 52.381 0.00 0.00 0.00 3.01
3571 3612 1.831106 ACAGGACATCACGCCATAAGA 59.169 47.619 0.00 0.00 0.00 2.10
3572 3613 1.935873 CACAGGACATCACGCCATAAG 59.064 52.381 0.00 0.00 0.00 1.73
3573 3614 2.011548 GCACAGGACATCACGCCATAA 61.012 52.381 0.00 0.00 0.00 1.90
3574 3615 0.461870 GCACAGGACATCACGCCATA 60.462 55.000 0.00 0.00 0.00 2.74
3575 3616 1.746615 GCACAGGACATCACGCCAT 60.747 57.895 0.00 0.00 0.00 4.40
3576 3617 2.358615 GCACAGGACATCACGCCA 60.359 61.111 0.00 0.00 0.00 5.69
3577 3618 3.490759 CGCACAGGACATCACGCC 61.491 66.667 0.00 0.00 0.00 5.68
3578 3619 4.152625 GCGCACAGGACATCACGC 62.153 66.667 0.30 0.00 39.49 5.34
3579 3620 3.490759 GGCGCACAGGACATCACG 61.491 66.667 10.83 0.00 0.00 4.35
3580 3621 3.490759 CGGCGCACAGGACATCAC 61.491 66.667 10.83 0.00 0.00 3.06
3581 3622 4.002506 ACGGCGCACAGGACATCA 62.003 61.111 10.83 0.00 0.00 3.07
3582 3623 3.490759 CACGGCGCACAGGACATC 61.491 66.667 10.83 0.00 0.00 3.06
3612 3653 4.170062 CAAGAGCGTGCATGGCCG 62.170 66.667 8.27 0.00 0.00 6.13
3613 3654 2.747460 TCAAGAGCGTGCATGGCC 60.747 61.111 8.27 0.00 0.00 5.36
3614 3655 1.094073 ATCTCAAGAGCGTGCATGGC 61.094 55.000 8.27 6.31 0.00 4.40
3615 3656 0.656259 CATCTCAAGAGCGTGCATGG 59.344 55.000 8.27 0.00 0.00 3.66
3616 3657 0.656259 CCATCTCAAGAGCGTGCATG 59.344 55.000 0.09 0.09 0.00 4.06
3617 3658 0.251354 ACCATCTCAAGAGCGTGCAT 59.749 50.000 0.00 0.00 0.00 3.96
3618 3659 0.894835 TACCATCTCAAGAGCGTGCA 59.105 50.000 0.00 0.00 0.00 4.57
3619 3660 1.661112 GTTACCATCTCAAGAGCGTGC 59.339 52.381 0.00 0.00 0.00 5.34
3620 3661 2.959516 TGTTACCATCTCAAGAGCGTG 58.040 47.619 0.00 0.00 0.00 5.34
3621 3662 3.244078 TGTTGTTACCATCTCAAGAGCGT 60.244 43.478 0.00 0.00 0.00 5.07
3622 3663 3.123621 GTGTTGTTACCATCTCAAGAGCG 59.876 47.826 0.00 0.00 0.00 5.03
3623 3664 4.319177 AGTGTTGTTACCATCTCAAGAGC 58.681 43.478 0.00 0.00 0.00 4.09
3624 3665 5.578727 GCTAGTGTTGTTACCATCTCAAGAG 59.421 44.000 0.00 0.00 0.00 2.85
3625 3666 5.246203 AGCTAGTGTTGTTACCATCTCAAGA 59.754 40.000 0.00 0.00 0.00 3.02
3626 3667 5.349817 CAGCTAGTGTTGTTACCATCTCAAG 59.650 44.000 0.00 0.00 0.00 3.02
3627 3668 5.011635 TCAGCTAGTGTTGTTACCATCTCAA 59.988 40.000 0.00 0.00 0.00 3.02
3628 3669 4.526650 TCAGCTAGTGTTGTTACCATCTCA 59.473 41.667 0.00 0.00 0.00 3.27
3629 3670 4.865365 GTCAGCTAGTGTTGTTACCATCTC 59.135 45.833 0.00 0.00 0.00 2.75
3630 3671 4.618460 CGTCAGCTAGTGTTGTTACCATCT 60.618 45.833 0.00 0.00 0.00 2.90
3631 3672 3.612860 CGTCAGCTAGTGTTGTTACCATC 59.387 47.826 0.00 0.00 0.00 3.51
3632 3673 3.585862 CGTCAGCTAGTGTTGTTACCAT 58.414 45.455 0.00 0.00 0.00 3.55
3633 3674 3.021269 CGTCAGCTAGTGTTGTTACCA 57.979 47.619 0.00 0.00 0.00 3.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.