Multiple sequence alignment - TraesCS3B01G395500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G395500 chr3B 100.000 3617 0 0 1 3617 623159434 623155818 0.000000e+00 6680.0
1 TraesCS3B01G395500 chr3B 100.000 2346 0 0 3932 6277 623155503 623153158 0.000000e+00 4333.0
2 TraesCS3B01G395500 chr3B 100.000 1641 0 0 6503 8143 623152932 623151292 0.000000e+00 3031.0
3 TraesCS3B01G395500 chr3B 81.455 426 68 7 3932 4353 623154976 623154558 1.010000e-88 339.0
4 TraesCS3B01G395500 chr3B 81.455 426 68 7 4459 4877 623155503 623155082 1.010000e-88 339.0
5 TraesCS3B01G395500 chr3B 82.239 259 37 8 4153 4406 623155032 623154778 1.780000e-51 215.0
6 TraesCS3B01G395500 chr3B 83.163 196 21 5 4689 4874 623155026 623154833 1.410000e-37 169.0
7 TraesCS3B01G395500 chr3B 92.188 64 5 0 5816 5879 623153533 623153470 3.130000e-14 91.6
8 TraesCS3B01G395500 chr3B 92.188 64 5 0 5902 5965 623153619 623153556 3.130000e-14 91.6
9 TraesCS3B01G395500 chr3A 90.174 1608 111 15 6546 8143 611704887 611703317 0.000000e+00 2050.0
10 TraesCS3B01G395500 chr3A 93.063 1283 64 7 1190 2448 611710618 611709337 0.000000e+00 1853.0
11 TraesCS3B01G395500 chr3A 93.535 1191 59 8 5089 6274 611706059 611704882 0.000000e+00 1757.0
12 TraesCS3B01G395500 chr3A 91.560 782 47 16 384 1156 611711791 611711020 0.000000e+00 1061.0
13 TraesCS3B01G395500 chr3A 88.143 700 68 8 4404 5093 611706788 611706094 0.000000e+00 819.0
14 TraesCS3B01G395500 chr3A 85.886 666 65 13 2967 3608 611708385 611707725 0.000000e+00 682.0
15 TraesCS3B01G395500 chr3A 91.489 470 37 1 2451 2920 611709244 611708778 1.920000e-180 643.0
16 TraesCS3B01G395500 chr3A 90.776 477 41 2 3932 4406 611707290 611706815 1.150000e-177 634.0
17 TraesCS3B01G395500 chr3A 82.364 533 65 15 3100 3608 611707974 611707447 3.490000e-118 436.0
18 TraesCS3B01G395500 chr3A 83.193 476 73 6 3932 4404 611707567 611707096 5.840000e-116 429.0
19 TraesCS3B01G395500 chr3A 82.988 482 69 9 4403 4876 611707346 611706870 2.720000e-114 424.0
20 TraesCS3B01G395500 chr3A 83.333 426 61 9 3932 4351 611706732 611706311 1.280000e-102 385.0
21 TraesCS3B01G395500 chr3A 81.429 490 73 11 4403 4881 611707624 611707142 1.280000e-102 385.0
22 TraesCS3B01G395500 chr3A 80.325 493 70 15 4403 4876 611707069 611706585 1.680000e-91 348.0
23 TraesCS3B01G395500 chr3A 84.985 333 48 2 4074 4405 611708261 611707930 3.640000e-88 337.0
24 TraesCS3B01G395500 chr3A 86.420 243 28 4 3354 3593 611708261 611708021 2.250000e-65 261.0
25 TraesCS3B01G395500 chr3A 83.251 203 24 7 4403 4602 611706507 611706312 2.340000e-40 178.0
26 TraesCS3B01G395500 chr3A 94.030 67 4 0 5813 5879 611705259 611705193 1.450000e-17 102.0
27 TraesCS3B01G395500 chr3D 92.769 1300 60 11 1172 2448 469163341 469162053 0.000000e+00 1849.0
28 TraesCS3B01G395500 chr3D 93.263 1143 51 6 5089 6228 469158772 469157653 0.000000e+00 1661.0
29 TraesCS3B01G395500 chr3D 87.284 1329 110 27 6823 8132 469156891 469155603 0.000000e+00 1463.0
30 TraesCS3B01G395500 chr3D 89.270 699 59 9 4404 5093 469159498 469158807 0.000000e+00 861.0
31 TraesCS3B01G395500 chr3D 95.197 458 19 3 384 838 469164179 469163722 0.000000e+00 721.0
32 TraesCS3B01G395500 chr3D 92.023 514 37 3 2451 2964 469161962 469161453 0.000000e+00 719.0
33 TraesCS3B01G395500 chr3D 90.598 468 42 2 3939 4405 469159992 469159526 3.230000e-173 619.0
34 TraesCS3B01G395500 chr3D 82.364 533 66 12 3100 3608 469160686 469160158 9.700000e-119 438.0
35 TraesCS3B01G395500 chr3D 83.473 478 70 9 3932 4404 469160278 469159805 3.490000e-118 436.0
36 TraesCS3B01G395500 chr3D 84.798 421 61 3 3932 4351 469159442 469159024 3.510000e-113 420.0
37 TraesCS3B01G395500 chr3D 82.231 484 71 12 4403 4876 469160056 469159578 3.540000e-108 403.0
38 TraesCS3B01G395500 chr3D 92.674 273 12 4 6523 6789 469157233 469156963 3.560000e-103 387.0
39 TraesCS3B01G395500 chr3D 81.301 492 72 13 4403 4881 469160335 469159851 1.660000e-101 381.0
40 TraesCS3B01G395500 chr3D 84.496 258 33 6 3354 3607 469160972 469160718 1.750000e-61 248.0
41 TraesCS3B01G395500 chr3D 85.714 203 22 6 4403 4602 469159223 469159025 2.980000e-49 207.0
42 TraesCS3B01G395500 chr3D 80.634 284 26 8 1 279 469164492 469164233 8.340000e-45 193.0
43 TraesCS3B01G395500 chr3D 95.455 66 3 0 5814 5879 469157981 469157916 1.120000e-18 106.0
44 TraesCS3B01G395500 chr5A 86.441 118 15 1 1 117 35115781 35115664 2.390000e-25 128.0
45 TraesCS3B01G395500 chr4A 84.348 115 14 4 2033 2145 500114938 500115050 8.640000e-20 110.0
46 TraesCS3B01G395500 chr4A 88.506 87 9 1 2029 2115 121272573 121272488 4.020000e-18 104.0
47 TraesCS3B01G395500 chr4A 83.721 86 8 4 4843 4923 179144443 179144527 8.760000e-10 76.8
48 TraesCS3B01G395500 chr2B 88.506 87 9 1 2029 2115 84162790 84162875 4.020000e-18 104.0
49 TraesCS3B01G395500 chr1B 87.640 89 11 0 2029 2117 440811208 440811296 4.020000e-18 104.0
50 TraesCS3B01G395500 chr1D 87.356 87 11 0 2029 2115 285848188 285848102 5.200000e-17 100.0
51 TraesCS3B01G395500 chr5D 87.356 87 10 1 2029 2115 260032878 260032963 1.870000e-16 99.0
52 TraesCS3B01G395500 chr5D 87.356 87 10 1 2029 2115 290185368 290185453 1.870000e-16 99.0
53 TraesCS3B01G395500 chr4D 87.654 81 9 1 4843 4923 301730975 301730896 8.700000e-15 93.5
54 TraesCS3B01G395500 chr4B 86.667 75 9 1 4849 4923 376136971 376136898 1.880000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G395500 chr3B 623151292 623159434 8142 True 1698.800000 6680 90.298667 1 8143 9 chr3B.!!$R1 8142
1 TraesCS3B01G395500 chr3A 611703317 611711791 8474 True 710.222222 2050 87.052444 384 8143 18 chr3A.!!$R1 7759
2 TraesCS3B01G395500 chr3D 469155603 469164492 8889 True 653.647059 1849 87.855529 1 8132 17 chr3D.!!$R1 8131

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
364 374 0.113580 AGTTATGTTTGGGCCGGGTT 59.886 50.0 2.18 0.0 0.00 4.11 F
1168 1201 0.109781 CCCAAACGCTCCGATTTGTG 60.110 55.0 0.00 0.0 34.60 3.33 F
1879 2297 0.176449 GCCATCATGCCAAAGTTCCC 59.824 55.0 0.00 0.0 0.00 3.97 F
2575 3091 0.324830 GTCTCCACCCTAGTGCCTCT 60.325 60.0 0.00 0.0 43.09 3.69 F
3359 4264 0.521291 ATGTTTTGACCATGGCGACG 59.479 50.0 13.04 0.0 0.00 5.12 F
3386 4572 0.605319 GGGTGAAGACATCGTTGGCA 60.605 55.0 1.44 0.0 30.96 4.92 F
4924 6155 0.738389 AAAACTCACGTTGTGGCCAG 59.262 50.0 5.11 0.0 33.87 4.85 F
5697 6969 0.323633 TCAATGACACCTGCCATGGG 60.324 55.0 15.13 0.0 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2313 2739 0.109342 CAGGTGGTTGAGCTCCTGTT 59.891 55.0 12.15 0.0 41.51 3.16 R
2956 3472 0.331278 TCCAATGCCCATTCGAAGGT 59.669 50.0 9.21 0.0 0.00 3.50 R
3340 4245 0.521291 CGTCGCCATGGTCAAAACAT 59.479 50.0 14.67 0.0 0.00 2.71 R
4100 5290 0.035630 GCTCACTCAGGGACAGCAAT 60.036 55.0 0.00 0.0 0.00 3.56 R
4674 5899 0.324368 TCCCACAGACCGCTATGAGT 60.324 55.0 0.00 0.0 0.00 3.41 R
5352 6624 0.460811 GTGATCGGCACTCATCTGCA 60.461 55.0 2.66 0.0 44.27 4.41 R
5738 7010 0.630673 TGGCCATAGGAGGTTGCATT 59.369 50.0 0.00 0.0 0.00 3.56 R
7516 8968 0.321346 TCTCGCAATCCTTGTGCTCA 59.679 50.0 0.00 0.0 40.84 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 2.664851 TGCTTGCAGGGTCGAACG 60.665 61.111 0.00 0.00 0.00 3.95
38 39 1.741770 GCTTGCAGGGTCGAACGAT 60.742 57.895 0.00 0.00 0.00 3.73
42 43 0.965866 TGCAGGGTCGAACGATCTCT 60.966 55.000 7.39 1.26 0.00 3.10
44 45 1.914634 CAGGGTCGAACGATCTCTTG 58.085 55.000 7.39 1.29 0.00 3.02
68 69 2.284625 AGTCGGGTGCCTCATCCA 60.285 61.111 0.00 0.00 33.50 3.41
73 74 0.527565 CGGGTGCCTCATCCAAAAAG 59.472 55.000 0.00 0.00 33.50 2.27
102 103 5.637809 AGAAAACAACAAAGAAGAACCGAC 58.362 37.500 0.00 0.00 0.00 4.79
103 104 3.668596 AACAACAAAGAAGAACCGACG 57.331 42.857 0.00 0.00 0.00 5.12
107 108 1.137479 ACAAAGAAGAACCGACGGTGA 59.863 47.619 22.53 0.00 35.34 4.02
117 118 1.485480 ACCGACGGTGAGAGAGAGATA 59.515 52.381 21.02 0.00 32.98 1.98
119 120 3.142951 CCGACGGTGAGAGAGAGATATT 58.857 50.000 5.48 0.00 0.00 1.28
122 123 4.973051 CGACGGTGAGAGAGAGATATTTTG 59.027 45.833 0.00 0.00 0.00 2.44
123 124 4.688021 ACGGTGAGAGAGAGATATTTTGC 58.312 43.478 0.00 0.00 0.00 3.68
126 132 4.054671 GTGAGAGAGAGATATTTTGCGGG 58.945 47.826 0.00 0.00 0.00 6.13
141 147 1.809869 CGGGAGCGATGTTGAGAGA 59.190 57.895 0.00 0.00 0.00 3.10
154 160 5.603170 TGTTGAGAGAGATGATGCATGTA 57.397 39.130 2.46 0.00 0.00 2.29
158 164 7.232127 TGTTGAGAGAGATGATGCATGTATAGA 59.768 37.037 2.46 0.00 0.00 1.98
159 165 7.957992 TGAGAGAGATGATGCATGTATAGAT 57.042 36.000 2.46 0.00 0.00 1.98
160 166 8.363761 TGAGAGAGATGATGCATGTATAGATT 57.636 34.615 2.46 0.00 0.00 2.40
161 167 8.813951 TGAGAGAGATGATGCATGTATAGATTT 58.186 33.333 2.46 0.00 0.00 2.17
162 168 9.656040 GAGAGAGATGATGCATGTATAGATTTT 57.344 33.333 2.46 0.00 0.00 1.82
198 204 9.778741 AGTGATGTGTAGATGAAAAAGTAAGAA 57.221 29.630 0.00 0.00 0.00 2.52
235 241 4.985538 ACGAAAGTGTGGTCCTATCTAG 57.014 45.455 0.00 0.00 46.97 2.43
237 243 4.771054 ACGAAAGTGTGGTCCTATCTAGTT 59.229 41.667 0.00 0.00 46.97 2.24
238 244 5.245526 ACGAAAGTGTGGTCCTATCTAGTTT 59.754 40.000 0.00 0.00 46.97 2.66
241 247 4.833390 AGTGTGGTCCTATCTAGTTTTGC 58.167 43.478 0.00 0.00 0.00 3.68
249 255 6.113411 GTCCTATCTAGTTTTGCCTGCTTTA 58.887 40.000 0.00 0.00 0.00 1.85
286 292 7.834881 TTATATAGTGGTCTCAACCTACCAG 57.165 40.000 0.00 0.00 46.19 4.00
287 293 1.645710 AGTGGTCTCAACCTACCAGG 58.354 55.000 0.00 0.00 46.19 4.45
288 294 0.613777 GTGGTCTCAACCTACCAGGG 59.386 60.000 0.00 0.00 46.19 4.45
301 311 3.414193 CAGGGAGATGGGGCAGCA 61.414 66.667 0.00 0.00 0.00 4.41
302 312 2.614969 AGGGAGATGGGGCAGCAA 60.615 61.111 0.00 0.00 0.00 3.91
303 313 2.440980 GGGAGATGGGGCAGCAAC 60.441 66.667 0.00 0.00 0.00 4.17
304 314 2.356278 GGAGATGGGGCAGCAACA 59.644 61.111 0.00 0.00 0.00 3.33
305 315 1.076485 GGAGATGGGGCAGCAACAT 60.076 57.895 0.00 0.00 0.00 2.71
306 316 1.389609 GGAGATGGGGCAGCAACATG 61.390 60.000 5.84 0.00 0.00 3.21
307 317 1.380785 AGATGGGGCAGCAACATGG 60.381 57.895 5.84 0.00 0.00 3.66
308 318 1.683365 GATGGGGCAGCAACATGGT 60.683 57.895 5.84 0.00 0.00 3.55
316 326 4.073200 GCAACATGGTGCTGCCCC 62.073 66.667 28.48 0.00 41.51 5.80
317 327 3.751246 CAACATGGTGCTGCCCCG 61.751 66.667 0.00 0.00 36.04 5.73
318 328 3.965258 AACATGGTGCTGCCCCGA 61.965 61.111 0.00 0.00 36.04 5.14
321 331 1.073722 CATGGTGCTGCCCCGATAT 59.926 57.895 0.00 0.00 36.04 1.63
326 336 1.271379 GGTGCTGCCCCGATATTACAT 60.271 52.381 0.00 0.00 0.00 2.29
331 341 0.328258 GCCCCGATATTACATGCCCT 59.672 55.000 0.00 0.00 0.00 5.19
343 353 2.795329 ACATGCCCTAAGTGAAACAGG 58.205 47.619 0.00 0.00 41.43 4.00
346 356 1.168714 GCCCTAAGTGAAACAGGCAG 58.831 55.000 0.00 0.00 41.43 4.85
347 357 1.545651 GCCCTAAGTGAAACAGGCAGT 60.546 52.381 0.00 0.00 41.43 4.40
348 358 2.863809 CCCTAAGTGAAACAGGCAGTT 58.136 47.619 0.00 0.00 43.89 3.16
349 359 3.809324 GCCCTAAGTGAAACAGGCAGTTA 60.809 47.826 0.00 0.00 40.26 2.24
350 360 4.589908 CCCTAAGTGAAACAGGCAGTTAT 58.410 43.478 0.00 0.00 40.26 1.89
351 361 4.396166 CCCTAAGTGAAACAGGCAGTTATG 59.604 45.833 0.00 0.00 40.26 1.90
352 362 5.003804 CCTAAGTGAAACAGGCAGTTATGT 58.996 41.667 0.00 0.00 40.26 2.29
353 363 5.473504 CCTAAGTGAAACAGGCAGTTATGTT 59.526 40.000 0.00 0.00 40.26 2.71
355 365 5.186996 AGTGAAACAGGCAGTTATGTTTG 57.813 39.130 7.94 0.00 46.67 2.93
356 366 4.037923 AGTGAAACAGGCAGTTATGTTTGG 59.962 41.667 7.94 0.00 46.67 3.28
357 367 3.320541 TGAAACAGGCAGTTATGTTTGGG 59.679 43.478 7.94 0.00 46.67 4.12
358 368 1.256812 ACAGGCAGTTATGTTTGGGC 58.743 50.000 0.00 0.00 0.00 5.36
359 369 0.532115 CAGGCAGTTATGTTTGGGCC 59.468 55.000 0.00 0.00 41.65 5.80
360 370 0.965363 AGGCAGTTATGTTTGGGCCG 60.965 55.000 0.00 0.00 45.79 6.13
361 371 1.510844 GCAGTTATGTTTGGGCCGG 59.489 57.895 0.00 0.00 0.00 6.13
362 372 1.944234 GCAGTTATGTTTGGGCCGGG 61.944 60.000 2.18 0.00 0.00 5.73
363 373 0.610785 CAGTTATGTTTGGGCCGGGT 60.611 55.000 2.18 0.00 0.00 5.28
364 374 0.113580 AGTTATGTTTGGGCCGGGTT 59.886 50.000 2.18 0.00 0.00 4.11
365 375 1.355043 AGTTATGTTTGGGCCGGGTTA 59.645 47.619 2.18 0.00 0.00 2.85
366 376 1.746787 GTTATGTTTGGGCCGGGTTAG 59.253 52.381 2.18 0.00 0.00 2.34
367 377 0.394625 TATGTTTGGGCCGGGTTAGC 60.395 55.000 2.18 0.00 0.00 3.09
368 378 2.035155 GTTTGGGCCGGGTTAGCT 59.965 61.111 2.18 0.00 0.00 3.32
369 379 2.034999 TTTGGGCCGGGTTAGCTG 59.965 61.111 2.18 0.00 0.00 4.24
370 380 2.530672 TTTGGGCCGGGTTAGCTGA 61.531 57.895 2.18 0.00 0.00 4.26
371 381 1.858739 TTTGGGCCGGGTTAGCTGAT 61.859 55.000 2.18 0.00 0.00 2.90
372 382 2.111251 GGGCCGGGTTAGCTGATC 59.889 66.667 2.18 0.00 0.00 2.92
373 383 2.742116 GGGCCGGGTTAGCTGATCA 61.742 63.158 2.18 0.00 0.00 2.92
374 384 1.223487 GGCCGGGTTAGCTGATCAA 59.777 57.895 2.18 0.00 0.00 2.57
375 385 0.815615 GGCCGGGTTAGCTGATCAAG 60.816 60.000 2.18 0.00 0.00 3.02
376 386 0.815615 GCCGGGTTAGCTGATCAAGG 60.816 60.000 2.18 0.00 0.00 3.61
377 387 0.179045 CCGGGTTAGCTGATCAAGGG 60.179 60.000 0.00 0.00 0.00 3.95
378 388 0.830648 CGGGTTAGCTGATCAAGGGA 59.169 55.000 0.00 0.00 0.00 4.20
379 389 1.209504 CGGGTTAGCTGATCAAGGGAA 59.790 52.381 0.00 0.00 0.00 3.97
380 390 2.158755 CGGGTTAGCTGATCAAGGGAAT 60.159 50.000 0.00 0.00 0.00 3.01
381 391 3.071023 CGGGTTAGCTGATCAAGGGAATA 59.929 47.826 0.00 0.00 0.00 1.75
382 392 4.263068 CGGGTTAGCTGATCAAGGGAATAT 60.263 45.833 0.00 0.00 0.00 1.28
427 437 0.177604 ATCTCGCAGGGAGCTTTCAG 59.822 55.000 9.69 0.00 42.82 3.02
446 457 2.027469 CAGGGTTAGGTAAAGCGGTTCT 60.027 50.000 0.00 0.00 36.40 3.01
463 474 2.280457 TTGCGTGCATCGTGGACA 60.280 55.556 9.76 0.00 38.73 4.02
472 483 0.950836 CATCGTGGACAGGCACAAAA 59.049 50.000 0.00 0.00 0.00 2.44
499 510 2.550978 AGACATATGAAGCCCGTTTCG 58.449 47.619 10.38 0.00 0.00 3.46
544 559 2.150397 AGGTCGTATTATCGGCAAGC 57.850 50.000 0.00 0.00 37.15 4.01
570 585 1.195448 CGGTGATGCGATAAAGCCATC 59.805 52.381 0.00 0.00 36.02 3.51
793 825 1.062581 CATCCTCCCCTTCTCTCTCCA 60.063 57.143 0.00 0.00 0.00 3.86
797 829 2.545810 CTCCCCTTCTCTCTCCACTTT 58.454 52.381 0.00 0.00 0.00 2.66
799 831 2.158158 TCCCCTTCTCTCTCCACTTTGA 60.158 50.000 0.00 0.00 0.00 2.69
858 891 2.125106 ATCACCTTTCCGCCGCTC 60.125 61.111 0.00 0.00 0.00 5.03
895 928 2.045242 CCGACCGAGACCCTCAGA 60.045 66.667 0.00 0.00 0.00 3.27
1065 1098 1.075659 GCTGGGCCAGTTCCTCTTT 59.924 57.895 32.80 0.00 33.43 2.52
1133 1166 0.901114 TACACCGCCTTCTGGTAGCA 60.901 55.000 0.00 0.00 37.72 3.49
1159 1192 4.426313 CCCCTCCCCCAAACGCTC 62.426 72.222 0.00 0.00 0.00 5.03
1160 1193 4.426313 CCCTCCCCCAAACGCTCC 62.426 72.222 0.00 0.00 0.00 4.70
1161 1194 4.778143 CCTCCCCCAAACGCTCCG 62.778 72.222 0.00 0.00 0.00 4.63
1162 1195 3.702048 CTCCCCCAAACGCTCCGA 61.702 66.667 0.00 0.00 0.00 4.55
1163 1196 3.006728 TCCCCCAAACGCTCCGAT 61.007 61.111 0.00 0.00 0.00 4.18
1164 1197 2.045340 CCCCCAAACGCTCCGATT 60.045 61.111 0.00 0.00 0.00 3.34
1165 1198 1.677633 CCCCCAAACGCTCCGATTT 60.678 57.895 0.00 0.00 0.00 2.17
1166 1199 1.506262 CCCCAAACGCTCCGATTTG 59.494 57.895 0.00 0.00 35.89 2.32
1167 1200 1.241315 CCCCAAACGCTCCGATTTGT 61.241 55.000 0.00 0.00 34.60 2.83
1168 1201 0.109781 CCCAAACGCTCCGATTTGTG 60.110 55.000 0.00 0.00 34.60 3.33
1169 1202 0.729140 CCAAACGCTCCGATTTGTGC 60.729 55.000 0.00 0.00 34.60 4.57
1170 1203 0.729140 CAAACGCTCCGATTTGTGCC 60.729 55.000 0.00 0.00 32.29 5.01
1203 1605 2.039787 TCTCATGCCCGGTACCCA 59.960 61.111 6.25 0.00 0.00 4.51
1244 1646 4.098914 AGCAAAGTGTCTTTGGGTATGA 57.901 40.909 19.27 0.00 0.00 2.15
1292 1694 4.330313 GTTTGTTCGTTTTGTTGGCATTG 58.670 39.130 0.00 0.00 0.00 2.82
1315 1717 0.320771 AGTTGCTCGCTGTACTTGGG 60.321 55.000 0.00 0.00 0.00 4.12
1375 1778 1.039856 ATCTGCAACGCCCAAAAGTT 58.960 45.000 0.00 0.00 0.00 2.66
1455 1858 2.544486 GGCTGCAGGTTTGACTTGAAAG 60.544 50.000 17.12 0.00 0.00 2.62
1457 1860 2.098614 TGCAGGTTTGACTTGAAAGCA 58.901 42.857 0.00 0.00 36.07 3.91
1577 1980 2.684927 GCCCTTCAGAATACCATGTGCT 60.685 50.000 0.00 0.00 0.00 4.40
1590 1993 4.511527 ACCATGTGCTAAAGATCTGTCTG 58.488 43.478 0.00 0.00 34.13 3.51
1675 2078 7.926813 GGTTGATCCATTGAGCCGTTAGCTA 62.927 48.000 0.00 0.00 44.14 3.32
1873 2291 2.960384 CCTCAATAGCCATCATGCCAAA 59.040 45.455 0.00 0.00 0.00 3.28
1879 2297 0.176449 GCCATCATGCCAAAGTTCCC 59.824 55.000 0.00 0.00 0.00 3.97
1953 2376 6.442513 ACATAGCTTTCTAGAAATTGCACC 57.557 37.500 23.70 9.00 0.00 5.01
2086 2512 0.386478 CACTGCCTTGCGCTTTTCTC 60.386 55.000 9.73 0.00 38.78 2.87
2117 2543 3.525537 CACGAGGATGCACAGATTAAGT 58.474 45.455 0.00 0.00 0.00 2.24
2129 2555 2.604914 CAGATTAAGTGCTAGGCGTGTG 59.395 50.000 0.00 0.00 0.00 3.82
2156 2582 0.827368 ACTAGAGCTTGTAGCCCTGC 59.173 55.000 0.00 0.00 43.77 4.85
2247 2673 4.020543 GAGTCTAGAAGATGGTGTGACCT 58.979 47.826 0.00 0.00 39.58 3.85
2252 2678 2.705658 AGAAGATGGTGTGACCTGTCAA 59.294 45.455 0.75 0.00 41.85 3.18
2289 2715 2.629017 ATCCCTTTGGCTGGAATTGT 57.371 45.000 0.00 0.00 33.54 2.71
2313 2739 1.966901 AACGTGACACTGACCAGGCA 61.967 55.000 3.68 0.00 0.00 4.75
2350 2776 1.153628 GGACCGGATCACAAGGACG 60.154 63.158 9.46 0.00 0.00 4.79
2356 2782 1.990563 CGGATCACAAGGACGTACAAC 59.009 52.381 0.00 0.00 0.00 3.32
2383 2809 1.225855 GTCACCATGTTCTTCGTGCA 58.774 50.000 0.00 0.00 0.00 4.57
2393 2819 0.599991 TCTTCGTGCACGCTGTGATT 60.600 50.000 33.63 0.00 39.60 2.57
2395 2821 1.840630 TTCGTGCACGCTGTGATTGG 61.841 55.000 33.63 4.45 39.60 3.16
2463 2979 4.279671 CCTTGACTATCTTCCGCTATGAGT 59.720 45.833 0.00 0.00 0.00 3.41
2467 2983 4.475345 ACTATCTTCCGCTATGAGTTCCT 58.525 43.478 0.00 0.00 0.00 3.36
2470 2986 1.482593 CTTCCGCTATGAGTTCCTGGT 59.517 52.381 0.00 0.00 0.00 4.00
2575 3091 0.324830 GTCTCCACCCTAGTGCCTCT 60.325 60.000 0.00 0.00 43.09 3.69
2593 3109 2.423892 CTCTTCTAGTAGTCAGCGCCAA 59.576 50.000 2.29 0.00 0.00 4.52
2658 3174 0.937441 TGCTACCATCTCCCTCTCCT 59.063 55.000 0.00 0.00 0.00 3.69
2725 3241 0.610785 CAACAATACCCCCTTGGCGT 60.611 55.000 0.00 0.00 37.83 5.68
2757 3273 0.737367 TGAGCGCGATCAACTCAAGG 60.737 55.000 26.68 0.00 37.49 3.61
2762 3278 1.923204 CGCGATCAACTCAAGGAGAAG 59.077 52.381 0.00 0.00 33.32 2.85
2768 3284 1.421646 CAACTCAAGGAGAAGGTGGGT 59.578 52.381 0.00 0.00 33.32 4.51
2787 3303 2.680913 CGGGCCTGAACAAAGCTCG 61.681 63.158 5.28 4.80 45.02 5.03
2856 3372 1.826024 GGCTCAGTCCACGGATCAT 59.174 57.895 0.00 0.00 0.00 2.45
2898 3414 1.613630 AGACGGGCTCCTCCACATT 60.614 57.895 0.00 0.00 36.21 2.71
2909 3425 2.751436 CCACATTGTCCAGGGCGG 60.751 66.667 0.00 0.00 0.00 6.13
2923 3439 4.712425 GCGGCTGCCAACTGCTTG 62.712 66.667 20.29 0.12 42.00 4.01
2924 3440 2.979676 CGGCTGCCAACTGCTTGA 60.980 61.111 20.29 0.00 42.00 3.02
2956 3472 2.511373 GCGGCGATGGTCATGTCA 60.511 61.111 12.98 0.00 0.00 3.58
2961 3477 1.009829 GCGATGGTCATGTCACCTTC 58.990 55.000 5.27 7.14 37.34 3.46
2964 3480 2.972625 GATGGTCATGTCACCTTCGAA 58.027 47.619 0.00 0.00 37.34 3.71
2965 3481 3.535561 GATGGTCATGTCACCTTCGAAT 58.464 45.455 0.00 0.00 37.34 3.34
3005 3885 3.940852 TGCAATTCACGAATGATGCTAGT 59.059 39.130 14.37 0.00 36.20 2.57
3041 3921 2.202987 GTCGCCAGCAGGATCAGG 60.203 66.667 0.00 0.00 36.89 3.86
3051 3931 2.111878 GGATCAGGGATGCCGGTG 59.888 66.667 1.90 0.00 0.00 4.94
3052 3932 2.111878 GATCAGGGATGCCGGTGG 59.888 66.667 1.90 0.00 0.00 4.61
3116 4006 2.283604 GGGCGGGGTGAAAATGGT 60.284 61.111 0.00 0.00 0.00 3.55
3131 4021 2.063015 ATGGTGTTGGCGTCCCTGAA 62.063 55.000 0.00 0.00 0.00 3.02
3154 4044 2.563798 CGGCTGCAACAATGGGTGT 61.564 57.895 0.50 0.00 44.64 4.16
3170 4060 4.722700 GTGTGGGGCGCTCATGGT 62.723 66.667 10.74 0.00 0.00 3.55
3183 4073 2.938756 GCTCATGGTGGAAGGTGAGAAG 60.939 54.545 5.49 0.00 40.30 2.85
3193 4083 3.437049 GGAAGGTGAGAAGGATTTGAACG 59.563 47.826 0.00 0.00 0.00 3.95
3212 4102 1.087501 GAGGATGAAAACGGAGTGGC 58.912 55.000 0.00 0.00 45.00 5.01
3215 4105 1.068541 GGATGAAAACGGAGTGGCAAC 60.069 52.381 0.00 0.00 45.00 4.17
3225 4115 2.519013 GGAGTGGCAACTTTCTGGATT 58.481 47.619 0.00 0.00 36.52 3.01
3339 4244 8.786826 AAACGGATCTGTGAATATGAAACTTA 57.213 30.769 8.25 0.00 0.00 2.24
3340 4245 8.786826 AACGGATCTGTGAATATGAAACTTAA 57.213 30.769 8.25 0.00 0.00 1.85
3357 4262 3.823873 ACTTAATGTTTTGACCATGGCGA 59.176 39.130 13.04 1.41 0.00 5.54
3359 4264 0.521291 ATGTTTTGACCATGGCGACG 59.479 50.000 13.04 0.00 0.00 5.12
3378 4283 3.728373 GGGGCGGGGTGAAGACAT 61.728 66.667 0.00 0.00 0.00 3.06
3386 4572 0.605319 GGGTGAAGACATCGTTGGCA 60.605 55.000 1.44 0.00 30.96 4.92
3394 4580 1.889105 CATCGTTGGCATCCCCGAG 60.889 63.158 0.00 0.00 35.87 4.63
3444 4630 1.228063 CTCATGGCGGAAGATGGGG 60.228 63.158 0.00 0.00 0.00 4.96
3494 4680 5.009310 AGTGGTAACTTTCCGAATTTTCCAC 59.991 40.000 16.45 16.45 41.74 4.02
3510 4697 4.829064 TTCCACGGAAAATCAGAAACAG 57.171 40.909 0.00 0.00 0.00 3.16
3523 4710 9.956720 AAAATCAGAAACAGAGTGAAAATACAG 57.043 29.630 0.00 0.00 0.00 2.74
3533 4720 7.973944 ACAGAGTGAAAATACAGAAACCAAAAC 59.026 33.333 0.00 0.00 0.00 2.43
3534 4721 7.973388 CAGAGTGAAAATACAGAAACCAAAACA 59.027 33.333 0.00 0.00 0.00 2.83
3565 4752 7.769272 TGTGAAACAGAAATTGAAATGGAAC 57.231 32.000 0.00 0.00 45.67 3.62
3567 4754 7.277539 TGTGAAACAGAAATTGAAATGGAACAC 59.722 33.333 0.00 0.00 45.67 3.32
3568 4755 7.515059 GTGAAACAGAAATTGAAATGGAACACG 60.515 37.037 0.00 0.00 38.05 4.49
3976 5166 4.438471 AGCGAAAATACGGAAACAAAAACG 59.562 37.500 0.00 0.00 0.00 3.60
3982 5172 2.465855 ACGGAAACAAAAACGGAATGC 58.534 42.857 0.00 0.00 0.00 3.56
3985 5175 3.453424 GGAAACAAAAACGGAATGCTGT 58.547 40.909 0.00 0.00 34.29 4.40
3995 5185 2.552315 ACGGAATGCTGTGAAACGAAAT 59.448 40.909 0.00 0.00 42.39 2.17
4007 5197 5.048364 TGTGAAACGAAATCGGAAATGGAAT 60.048 36.000 7.81 0.00 42.39 3.01
4009 5199 6.687105 GTGAAACGAAATCGGAAATGGAATAG 59.313 38.462 7.81 0.00 44.95 1.73
4017 5207 4.258543 TCGGAAATGGAATAGCGTTTTCT 58.741 39.130 0.00 0.00 0.00 2.52
4072 5262 9.406828 GAATGTGAAACTTCCTATTTTTACCAC 57.593 33.333 0.00 0.00 38.04 4.16
4100 5290 4.329545 GGCAGGGTGAAGACGGCA 62.330 66.667 0.00 0.00 0.00 5.69
4105 5295 1.675641 GGGTGAAGACGGCATTGCT 60.676 57.895 8.82 0.00 0.00 3.91
4123 5313 4.459089 GTCCCTGAGTGAGCGGCC 62.459 72.222 0.00 0.00 0.00 6.13
4201 5391 5.840693 AGGATGAAAATGGAGTGGAAACTTT 59.159 36.000 0.00 0.00 0.00 2.66
4203 5393 5.181690 TGAAAATGGAGTGGAAACTTTCG 57.818 39.130 0.00 0.00 0.00 3.46
4251 5442 6.270064 ACAAAGTGAAAATACGGAAACCAAG 58.730 36.000 0.00 0.00 0.00 3.61
4255 5446 5.591067 AGTGAAAATACGGAAACCAAGACAA 59.409 36.000 0.00 0.00 0.00 3.18
4355 5546 4.522789 ACTTTCTGTTTTTACCATGGCGAT 59.477 37.500 13.04 0.00 0.00 4.58
4383 5575 1.066918 GGTGAAGACGACGTGTGGT 59.933 57.895 4.58 0.00 0.00 4.16
4394 5586 2.030562 GTGTGGTGTCCCCGAGTG 59.969 66.667 0.00 0.00 35.15 3.51
4422 5644 2.699954 GCGGAAGTGAGAAGGATTTGA 58.300 47.619 0.00 0.00 0.00 2.69
4431 5653 6.648192 AGTGAGAAGGATTTGAACTAGGATG 58.352 40.000 0.00 0.00 0.00 3.51
4439 5661 7.413446 AGGATTTGAACTAGGATGAAAATGGA 58.587 34.615 0.00 0.00 0.00 3.41
4452 5674 6.071165 GGATGAAAATGGAGTGGAAATTGTCT 60.071 38.462 0.00 0.00 0.00 3.41
4460 5682 5.243730 TGGAGTGGAAATTGTCTGGATTTTC 59.756 40.000 0.00 0.00 0.00 2.29
4514 5736 5.683743 CGAAAACAAAAAGGAATACTGCGAA 59.316 36.000 0.00 0.00 0.00 4.70
4516 5738 6.822073 AAACAAAAAGGAATACTGCGAAAC 57.178 33.333 0.00 0.00 0.00 2.78
4517 5739 5.767816 ACAAAAAGGAATACTGCGAAACT 57.232 34.783 0.00 0.00 0.00 2.66
4522 5746 2.230508 AGGAATACTGCGAAACTGACGA 59.769 45.455 0.00 0.00 0.00 4.20
4526 5750 5.390567 GGAATACTGCGAAACTGACGAAAAT 60.391 40.000 0.00 0.00 0.00 1.82
4558 5782 1.210967 AGTGTTTTCCGGTGGAACAGA 59.789 47.619 16.36 0.00 41.87 3.41
4561 5785 1.332686 GTTTTCCGGTGGAACAGACAC 59.667 52.381 0.00 0.00 41.87 3.67
4629 5854 2.046285 GGTTGGGGTGAAGATGGCG 61.046 63.158 0.00 0.00 0.00 5.69
4685 5910 2.072487 ATGGGGCACTCATAGCGGT 61.072 57.895 0.00 0.00 0.00 5.68
4687 5912 2.435693 GGGGCACTCATAGCGGTCT 61.436 63.158 0.00 0.00 0.00 3.85
4697 5922 1.338136 ATAGCGGTCTGTGGGAAGGG 61.338 60.000 0.00 0.00 0.00 3.95
4724 5949 5.250543 TGAACTAGGATGAAAATGGAGTGGA 59.749 40.000 0.00 0.00 0.00 4.02
4742 5967 1.280998 GGAAACTTCCCGGATTCTCCA 59.719 52.381 0.73 0.00 41.62 3.86
4746 5971 1.131638 CTTCCCGGATTCTCCATGGA 58.868 55.000 15.27 15.27 35.91 3.41
4777 6002 7.466725 CGGAAACAGAGTGAAAATACTGAAACA 60.467 37.037 0.00 0.00 34.88 2.83
4853 6084 4.545208 TGGAAACAGATCCGTGAATACA 57.455 40.909 0.00 0.00 42.76 2.29
4862 6093 6.485313 ACAGATCCGTGAATACAAAACTTTCA 59.515 34.615 0.00 0.00 0.00 2.69
4880 6111 5.830991 ACTTTCAGTTTTTACCATGGCTACA 59.169 36.000 13.04 0.00 0.00 2.74
4924 6155 0.738389 AAAACTCACGTTGTGGCCAG 59.262 50.000 5.11 0.00 33.87 4.85
4937 6168 1.539827 GTGGCCAGTAATGACAACACC 59.460 52.381 5.11 0.00 0.00 4.16
4955 6186 5.112129 ACACCAATACCTAACAGAATCCC 57.888 43.478 0.00 0.00 0.00 3.85
4958 6189 4.542525 ACCAATACCTAACAGAATCCCCAA 59.457 41.667 0.00 0.00 0.00 4.12
4964 6195 3.053693 CCTAACAGAATCCCCAACCATCA 60.054 47.826 0.00 0.00 0.00 3.07
4969 6200 2.854967 AGAATCCCCAACCATCATCACT 59.145 45.455 0.00 0.00 0.00 3.41
4970 6201 2.742428 ATCCCCAACCATCATCACTG 57.258 50.000 0.00 0.00 0.00 3.66
4987 6218 2.026822 CACTGTATTGTCCAGGAGCCTT 60.027 50.000 0.00 0.00 34.16 4.35
4989 6220 3.844211 ACTGTATTGTCCAGGAGCCTTTA 59.156 43.478 0.00 0.00 34.16 1.85
5020 6252 5.357257 CGGCTGGTTTATGAGTTATACACT 58.643 41.667 0.00 0.00 39.07 3.55
5041 6273 3.944015 CTGGCTTAGGAGTCATCAAAAGG 59.056 47.826 0.00 0.00 36.79 3.11
5043 6275 4.202567 TGGCTTAGGAGTCATCAAAAGGTT 60.203 41.667 0.00 0.00 31.17 3.50
5079 6311 7.928908 TCAATTGAAATAGTTTGCTTGTGAC 57.071 32.000 5.45 0.00 0.00 3.67
5082 6314 9.462174 CAATTGAAATAGTTTGCTTGTGACTTA 57.538 29.630 0.00 0.00 0.00 2.24
5084 6316 6.966021 TGAAATAGTTTGCTTGTGACTTACC 58.034 36.000 0.00 0.00 0.00 2.85
5093 6325 4.404073 TGCTTGTGACTTACCCAATTGTTT 59.596 37.500 4.43 0.00 0.00 2.83
5125 6397 4.565564 ACCGTATTTGCTTCGTATCTGTTC 59.434 41.667 0.00 0.00 0.00 3.18
5165 6437 6.806217 TCCCTATTCATTTCCCAGGTTTTTA 58.194 36.000 0.00 0.00 0.00 1.52
5166 6438 7.426667 TCCCTATTCATTTCCCAGGTTTTTAT 58.573 34.615 0.00 0.00 0.00 1.40
5213 6485 3.135530 AGCACTCAGTTCCTTCTGTTTCT 59.864 43.478 0.00 0.00 36.85 2.52
5248 6520 3.627123 TCCATATTTGAACATGCGACTGG 59.373 43.478 0.00 0.00 0.00 4.00
5371 6643 0.460811 TGCAGATGAGTGCCGATCAC 60.461 55.000 0.00 0.33 43.28 3.06
5398 6670 2.985847 GGGAGTGTGGGCAAGTGC 60.986 66.667 0.00 0.00 41.14 4.40
5459 6731 2.028930 CCTCCCAAGTGTGAGTCTGTAC 60.029 54.545 0.00 0.00 0.00 2.90
5583 6855 4.639310 ACACGGGTAGTACATCAGAACTAG 59.361 45.833 2.06 0.00 0.00 2.57
5661 6933 9.832445 CTGTACTAAGGTTGAATATTGGTGTAT 57.168 33.333 0.00 0.00 0.00 2.29
5697 6969 0.323633 TCAATGACACCTGCCATGGG 60.324 55.000 15.13 0.00 0.00 4.00
5720 6992 4.438065 GGCATTCATTTGTGTATGCGTGTA 60.438 41.667 11.90 0.00 43.22 2.90
5737 7009 8.936070 ATGCGTGTACTTATAGAACATTTGTA 57.064 30.769 0.00 0.00 0.00 2.41
5738 7010 8.760103 TGCGTGTACTTATAGAACATTTGTAA 57.240 30.769 0.00 0.00 0.00 2.41
5797 7069 2.562738 AGCCTTTTGCATTTGGGAGTAC 59.437 45.455 0.00 0.00 44.83 2.73
5810 7084 4.919774 TGGGAGTACAGCCTTCATAAAA 57.080 40.909 0.00 0.00 0.00 1.52
5833 7107 9.816354 AAAACTTACAACATGCTCTAATTTGTT 57.184 25.926 0.00 0.00 32.73 2.83
5882 7156 9.513906 TCTCAGATTGTGAATTGGTAAACATTA 57.486 29.630 0.00 0.00 33.60 1.90
6073 7347 5.298527 TGATGGCTATGCTTTGAGAATGAAG 59.701 40.000 0.00 0.00 0.00 3.02
6167 7441 8.523915 TGTCAGGATTTTGCATTCTATATTGT 57.476 30.769 0.00 0.00 0.00 2.71
6251 7525 9.665719 TTTAAAGTTCTTTCAATTTCTTTGGCT 57.334 25.926 0.87 0.00 35.92 4.75
6252 7526 7.543947 AAAGTTCTTTCAATTTCTTTGGCTG 57.456 32.000 0.00 0.00 35.92 4.85
6576 7976 2.015736 AGACAGCAATCTAGCCAACG 57.984 50.000 0.00 0.00 34.23 4.10
6765 8171 8.546597 AAAACAATTACAAGTGCTTGAAAGTT 57.453 26.923 17.62 11.17 42.93 2.66
6854 8298 8.243426 TCTGCAGTTCACATTAATTTACATTCC 58.757 33.333 14.67 0.00 0.00 3.01
6858 8302 8.405531 CAGTTCACATTAATTTACATTCCGGAT 58.594 33.333 4.15 0.00 0.00 4.18
6859 8303 8.405531 AGTTCACATTAATTTACATTCCGGATG 58.594 33.333 4.15 8.71 41.71 3.51
6861 8305 7.925993 TCACATTAATTTACATTCCGGATGTC 58.074 34.615 18.79 0.00 45.88 3.06
6863 8307 9.051679 CACATTAATTTACATTCCGGATGTCTA 57.948 33.333 18.79 11.08 45.88 2.59
7143 8591 1.285578 GCTCCTCGCTTCATCTTGAC 58.714 55.000 0.00 0.00 35.14 3.18
7230 8678 6.935167 TGATGTTTCAAGCAGACTACATAGA 58.065 36.000 0.00 0.00 33.96 1.98
7306 8754 7.663081 TGAAGTCTTAAATTTCAGAGTCATGCT 59.337 33.333 9.61 0.00 0.00 3.79
7307 8755 7.992754 AGTCTTAAATTTCAGAGTCATGCTT 57.007 32.000 2.26 0.00 0.00 3.91
7308 8756 8.401490 AGTCTTAAATTTCAGAGTCATGCTTT 57.599 30.769 2.26 0.00 0.00 3.51
7309 8757 8.295288 AGTCTTAAATTTCAGAGTCATGCTTTG 58.705 33.333 2.26 0.00 0.00 2.77
7310 8758 7.540055 GTCTTAAATTTCAGAGTCATGCTTTGG 59.460 37.037 2.26 0.00 30.94 3.28
7311 8759 5.796424 AAATTTCAGAGTCATGCTTTGGT 57.204 34.783 7.49 0.00 30.94 3.67
7312 8760 4.778534 ATTTCAGAGTCATGCTTTGGTG 57.221 40.909 7.49 0.00 30.94 4.17
7313 8761 2.936919 TCAGAGTCATGCTTTGGTGT 57.063 45.000 7.49 0.00 30.94 4.16
7317 8765 2.549754 AGAGTCATGCTTTGGTGTTTCG 59.450 45.455 0.00 0.00 0.00 3.46
7332 8780 1.726533 TTTCGGTGTTTCGGGCCAAC 61.727 55.000 4.39 0.29 0.00 3.77
7348 8796 3.602483 GCCAACGATAACTTGGTTCCTA 58.398 45.455 3.95 0.00 40.46 2.94
7351 8799 4.630069 CCAACGATAACTTGGTTCCTAGTG 59.370 45.833 6.70 0.00 34.50 2.74
7370 8818 2.481952 GTGTGGAGTCTTGCTGTTGATC 59.518 50.000 0.00 0.00 0.00 2.92
7373 8821 3.188048 GTGGAGTCTTGCTGTTGATCAAG 59.812 47.826 8.80 0.00 40.62 3.02
7419 8867 0.897621 CTGGGCCCTGGTCAAAAATC 59.102 55.000 25.70 0.00 0.00 2.17
7428 8876 5.764686 GCCCTGGTCAAAAATCAGAAAAATT 59.235 36.000 0.00 0.00 0.00 1.82
7438 8886 5.452078 AATCAGAAAAATTGACGCTGGAA 57.548 34.783 0.00 0.00 0.00 3.53
7474 8922 8.986477 AAAGTTGCATATTTTGATGTTCTACC 57.014 30.769 0.00 0.00 0.00 3.18
7515 8967 3.055891 AGAAATGGTGGCTTAACAATGGC 60.056 43.478 0.00 0.00 0.00 4.40
7516 8968 2.236489 ATGGTGGCTTAACAATGGCT 57.764 45.000 0.00 0.00 0.00 4.75
7525 8977 3.829948 CTTAACAATGGCTGAGCACAAG 58.170 45.455 6.82 2.42 0.00 3.16
7555 9007 6.210078 CGAGAGGCAAAACTATCTAACCTAG 58.790 44.000 0.00 0.00 0.00 3.02
7591 9043 6.095377 GCAAAAGTCTCTGGGTAATTCAATG 58.905 40.000 0.00 0.00 0.00 2.82
7604 9056 7.039434 TGGGTAATTCAATGTGAAAAGCATACA 60.039 33.333 0.00 0.00 40.12 2.29
7622 9074 5.694006 GCATACAGATATCGAACAGCTCTTT 59.306 40.000 0.00 0.00 0.00 2.52
7627 9079 7.144661 ACAGATATCGAACAGCTCTTTATCTG 58.855 38.462 18.51 18.51 42.45 2.90
7637 9089 4.210955 CAGCTCTTTATCTGAAGAATCCGC 59.789 45.833 0.00 0.00 35.38 5.54
7655 9107 0.310543 GCGGACAATGACTTGCAACA 59.689 50.000 0.00 0.00 35.69 3.33
7671 9123 2.854805 GCAACAGAAACTCCGAAAGTGC 60.855 50.000 0.00 0.00 38.58 4.40
7683 9135 4.127171 TCCGAAAGTGCTATAATTCCAGC 58.873 43.478 4.61 4.61 38.31 4.85
7701 9154 1.560860 GCTCTCACCAGTTGCACGAC 61.561 60.000 0.00 0.00 0.00 4.34
7708 9161 2.031163 AGTTGCACGACCTCAGGC 59.969 61.111 0.00 0.00 0.00 4.85
7778 9232 9.717892 GAAAAGAAAGAAAGTAACAGGTACAAG 57.282 33.333 0.00 0.00 34.88 3.16
7807 9261 0.171007 CCGCATTCCACATTCACACC 59.829 55.000 0.00 0.00 0.00 4.16
7834 9288 2.171003 GCCAAGCCTAACCAATTCAGT 58.829 47.619 0.00 0.00 0.00 3.41
7841 9295 5.675538 AGCCTAACCAATTCAGTGATCTAC 58.324 41.667 0.00 0.00 0.00 2.59
7844 9298 6.543831 GCCTAACCAATTCAGTGATCTACAAT 59.456 38.462 0.00 0.00 0.00 2.71
7846 9300 8.616076 CCTAACCAATTCAGTGATCTACAATTC 58.384 37.037 0.00 0.00 0.00 2.17
7847 9301 9.388506 CTAACCAATTCAGTGATCTACAATTCT 57.611 33.333 0.00 0.00 0.00 2.40
7849 9303 8.723942 ACCAATTCAGTGATCTACAATTCTAC 57.276 34.615 0.00 0.00 0.00 2.59
7850 9304 8.321353 ACCAATTCAGTGATCTACAATTCTACA 58.679 33.333 0.00 0.00 0.00 2.74
7851 9305 9.166173 CCAATTCAGTGATCTACAATTCTACAA 57.834 33.333 0.00 0.00 0.00 2.41
7853 9307 8.954950 ATTCAGTGATCTACAATTCTACAAGG 57.045 34.615 0.00 0.00 0.00 3.61
7884 9338 1.293498 CCAGTCCCGTCCACAGAAG 59.707 63.158 0.00 0.00 0.00 2.85
7886 9340 2.047179 GTCCCGTCCACAGAAGCC 60.047 66.667 0.00 0.00 0.00 4.35
7888 9342 4.003788 CCCGTCCACAGAAGCCGT 62.004 66.667 0.00 0.00 0.00 5.68
7889 9343 2.432628 CCGTCCACAGAAGCCGTC 60.433 66.667 0.00 0.00 0.00 4.79
7933 9387 2.170607 GGACAAGTAGCATGGCCTAGAA 59.829 50.000 3.32 0.00 43.09 2.10
7939 9393 0.107654 AGCATGGCCTAGAACGGTTC 60.108 55.000 12.91 12.91 0.00 3.62
7940 9394 1.095807 GCATGGCCTAGAACGGTTCC 61.096 60.000 16.84 3.05 0.00 3.62
8021 9478 0.523072 CCTGCACAAGAACATTCGGG 59.477 55.000 0.00 0.00 0.00 5.14
8024 9481 1.202758 TGCACAAGAACATTCGGGTCT 60.203 47.619 0.00 0.00 0.00 3.85
8096 9555 1.614903 TGCAAAAGAATCCCAGCACAG 59.385 47.619 0.00 0.00 0.00 3.66
8121 9580 0.388134 TGAGCAAACTAGCGGTCGAC 60.388 55.000 7.13 7.13 40.15 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.672066 GCACTAGCTTTTCCCCCTT 57.328 52.632 0.00 0.00 37.91 3.95
23 24 0.965866 AGAGATCGTTCGACCCTGCA 60.966 55.000 0.00 0.00 0.00 4.41
42 43 3.059982 CACCCGACTCCTCTGCAA 58.940 61.111 0.00 0.00 0.00 4.08
44 45 4.459089 GGCACCCGACTCCTCTGC 62.459 72.222 0.00 0.00 0.00 4.26
68 69 8.669946 TCTTTGTTGTTTTCTTTCACCTTTTT 57.330 26.923 0.00 0.00 0.00 1.94
73 74 7.148639 GGTTCTTCTTTGTTGTTTTCTTTCACC 60.149 37.037 0.00 0.00 0.00 4.02
102 103 3.733224 CGCAAAATATCTCTCTCTCACCG 59.267 47.826 0.00 0.00 0.00 4.94
103 104 4.054671 CCGCAAAATATCTCTCTCTCACC 58.945 47.826 0.00 0.00 0.00 4.02
107 108 3.244044 GCTCCCGCAAAATATCTCTCTCT 60.244 47.826 0.00 0.00 35.78 3.10
117 118 0.171007 CAACATCGCTCCCGCAAAAT 59.829 50.000 0.00 0.00 35.30 1.82
119 120 1.298157 CTCAACATCGCTCCCGCAAA 61.298 55.000 0.00 0.00 35.30 3.68
122 123 1.880340 CTCTCAACATCGCTCCCGC 60.880 63.158 0.00 0.00 0.00 6.13
123 124 0.248825 CTCTCTCAACATCGCTCCCG 60.249 60.000 0.00 0.00 0.00 5.14
126 132 3.706802 TCATCTCTCTCAACATCGCTC 57.293 47.619 0.00 0.00 0.00 5.03
133 139 7.600960 TCTATACATGCATCATCTCTCTCAAC 58.399 38.462 0.00 0.00 0.00 3.18
134 140 7.771927 TCTATACATGCATCATCTCTCTCAA 57.228 36.000 0.00 0.00 0.00 3.02
164 170 4.994217 TCATCTACACATCACTCGCAAAAA 59.006 37.500 0.00 0.00 0.00 1.94
165 171 4.565022 TCATCTACACATCACTCGCAAAA 58.435 39.130 0.00 0.00 0.00 2.44
166 172 4.186856 TCATCTACACATCACTCGCAAA 57.813 40.909 0.00 0.00 0.00 3.68
167 173 3.866883 TCATCTACACATCACTCGCAA 57.133 42.857 0.00 0.00 0.00 4.85
168 174 3.866883 TTCATCTACACATCACTCGCA 57.133 42.857 0.00 0.00 0.00 5.10
169 175 5.120830 ACTTTTTCATCTACACATCACTCGC 59.879 40.000 0.00 0.00 0.00 5.03
170 176 6.712241 ACTTTTTCATCTACACATCACTCG 57.288 37.500 0.00 0.00 0.00 4.18
171 177 9.424319 TCTTACTTTTTCATCTACACATCACTC 57.576 33.333 0.00 0.00 0.00 3.51
172 178 9.778741 TTCTTACTTTTTCATCTACACATCACT 57.221 29.630 0.00 0.00 0.00 3.41
212 218 3.432378 AGATAGGACCACACTTTCGTCT 58.568 45.455 0.00 0.00 0.00 4.18
216 222 6.128254 GCAAAACTAGATAGGACCACACTTTC 60.128 42.308 0.00 0.00 0.00 2.62
219 225 4.323562 GGCAAAACTAGATAGGACCACACT 60.324 45.833 0.00 0.00 0.00 3.55
229 235 5.190925 TCCCTAAAGCAGGCAAAACTAGATA 59.809 40.000 0.00 0.00 43.98 1.98
232 238 3.686016 TCCCTAAAGCAGGCAAAACTAG 58.314 45.455 0.00 0.00 43.98 2.57
233 239 3.329520 TCTCCCTAAAGCAGGCAAAACTA 59.670 43.478 0.00 0.00 43.98 2.24
234 240 2.108250 TCTCCCTAAAGCAGGCAAAACT 59.892 45.455 0.00 0.00 43.98 2.66
235 241 2.489722 CTCTCCCTAAAGCAGGCAAAAC 59.510 50.000 0.00 0.00 43.98 2.43
237 243 1.985159 TCTCTCCCTAAAGCAGGCAAA 59.015 47.619 0.00 0.00 43.98 3.68
238 244 1.656587 TCTCTCCCTAAAGCAGGCAA 58.343 50.000 0.00 0.00 43.98 4.52
241 247 7.888250 ATAAATTTTCTCTCCCTAAAGCAGG 57.112 36.000 0.00 0.00 45.07 4.85
249 255 9.453830 AGACCACTATATAAATTTTCTCTCCCT 57.546 33.333 0.00 0.00 0.00 4.20
279 285 2.150051 GCCCCATCTCCCTGGTAGG 61.150 68.421 0.00 0.00 34.23 3.18
280 286 1.384502 TGCCCCATCTCCCTGGTAG 60.385 63.158 0.00 0.00 34.23 3.18
281 287 1.384502 CTGCCCCATCTCCCTGGTA 60.385 63.158 0.00 0.00 34.23 3.25
282 288 2.693864 CTGCCCCATCTCCCTGGT 60.694 66.667 0.00 0.00 34.23 4.00
284 290 2.987596 TTGCTGCCCCATCTCCCTG 61.988 63.158 0.00 0.00 0.00 4.45
286 292 2.440980 GTTGCTGCCCCATCTCCC 60.441 66.667 0.00 0.00 0.00 4.30
287 293 1.076485 ATGTTGCTGCCCCATCTCC 60.076 57.895 0.00 0.00 0.00 3.71
288 294 1.389609 CCATGTTGCTGCCCCATCTC 61.390 60.000 0.00 0.00 0.00 2.75
301 311 1.920734 TATCGGGGCAGCACCATGTT 61.921 55.000 15.99 0.00 42.05 2.71
302 312 1.708993 ATATCGGGGCAGCACCATGT 61.709 55.000 15.99 1.93 42.05 3.21
303 313 0.538057 AATATCGGGGCAGCACCATG 60.538 55.000 15.99 0.00 42.05 3.66
304 314 1.064003 TAATATCGGGGCAGCACCAT 58.936 50.000 15.99 9.13 42.05 3.55
305 315 0.107831 GTAATATCGGGGCAGCACCA 59.892 55.000 15.99 0.66 42.05 4.17
306 316 0.107831 TGTAATATCGGGGCAGCACC 59.892 55.000 2.34 2.34 37.93 5.01
307 317 1.806542 CATGTAATATCGGGGCAGCAC 59.193 52.381 0.00 0.00 0.00 4.40
308 318 1.881925 GCATGTAATATCGGGGCAGCA 60.882 52.381 0.00 0.00 0.00 4.41
309 319 0.804989 GCATGTAATATCGGGGCAGC 59.195 55.000 0.00 0.00 0.00 5.25
310 320 1.453155 GGCATGTAATATCGGGGCAG 58.547 55.000 0.00 0.00 0.00 4.85
311 321 0.037590 GGGCATGTAATATCGGGGCA 59.962 55.000 0.00 0.00 0.00 5.36
312 322 0.328258 AGGGCATGTAATATCGGGGC 59.672 55.000 0.00 0.00 0.00 5.80
313 323 3.263425 ACTTAGGGCATGTAATATCGGGG 59.737 47.826 0.00 0.00 0.00 5.73
314 324 4.020573 TCACTTAGGGCATGTAATATCGGG 60.021 45.833 0.00 0.00 0.00 5.14
315 325 5.147330 TCACTTAGGGCATGTAATATCGG 57.853 43.478 0.00 0.00 0.00 4.18
316 326 6.481976 TGTTTCACTTAGGGCATGTAATATCG 59.518 38.462 0.00 0.00 0.00 2.92
317 327 7.041098 CCTGTTTCACTTAGGGCATGTAATATC 60.041 40.741 0.00 0.00 0.00 1.63
318 328 6.772716 CCTGTTTCACTTAGGGCATGTAATAT 59.227 38.462 0.00 0.00 0.00 1.28
321 331 4.331968 CCTGTTTCACTTAGGGCATGTAA 58.668 43.478 0.00 0.00 0.00 2.41
326 336 0.476338 TGCCTGTTTCACTTAGGGCA 59.524 50.000 0.00 0.00 45.81 5.36
331 341 6.238897 CCAAACATAACTGCCTGTTTCACTTA 60.239 38.462 0.00 0.00 42.16 2.24
343 353 1.510844 CCGGCCCAAACATAACTGC 59.489 57.895 0.00 0.00 0.00 4.40
346 356 1.746787 CTAACCCGGCCCAAACATAAC 59.253 52.381 0.00 0.00 0.00 1.89
347 357 1.956159 GCTAACCCGGCCCAAACATAA 60.956 52.381 0.00 0.00 0.00 1.90
348 358 0.394625 GCTAACCCGGCCCAAACATA 60.395 55.000 0.00 0.00 0.00 2.29
349 359 1.680989 GCTAACCCGGCCCAAACAT 60.681 57.895 0.00 0.00 0.00 2.71
350 360 2.282603 GCTAACCCGGCCCAAACA 60.283 61.111 0.00 0.00 0.00 2.83
351 361 2.035155 AGCTAACCCGGCCCAAAC 59.965 61.111 0.00 0.00 0.00 2.93
352 362 1.858739 ATCAGCTAACCCGGCCCAAA 61.859 55.000 0.00 0.00 0.00 3.28
353 363 2.265467 GATCAGCTAACCCGGCCCAA 62.265 60.000 0.00 0.00 0.00 4.12
354 364 2.690881 ATCAGCTAACCCGGCCCA 60.691 61.111 0.00 0.00 0.00 5.36
355 365 2.111251 GATCAGCTAACCCGGCCC 59.889 66.667 0.00 0.00 0.00 5.80
356 366 0.815615 CTTGATCAGCTAACCCGGCC 60.816 60.000 0.00 0.00 0.00 6.13
357 367 0.815615 CCTTGATCAGCTAACCCGGC 60.816 60.000 0.00 0.00 0.00 6.13
358 368 0.179045 CCCTTGATCAGCTAACCCGG 60.179 60.000 0.00 0.00 0.00 5.73
359 369 0.830648 TCCCTTGATCAGCTAACCCG 59.169 55.000 0.00 0.00 0.00 5.28
360 370 3.584733 ATTCCCTTGATCAGCTAACCC 57.415 47.619 0.00 0.00 0.00 4.11
361 371 5.471456 CACATATTCCCTTGATCAGCTAACC 59.529 44.000 0.00 0.00 0.00 2.85
362 372 5.471456 CCACATATTCCCTTGATCAGCTAAC 59.529 44.000 0.00 0.00 0.00 2.34
363 373 5.624159 CCACATATTCCCTTGATCAGCTAA 58.376 41.667 0.00 0.00 0.00 3.09
364 374 4.505566 GCCACATATTCCCTTGATCAGCTA 60.506 45.833 0.00 0.00 0.00 3.32
365 375 3.749954 GCCACATATTCCCTTGATCAGCT 60.750 47.826 0.00 0.00 0.00 4.24
366 376 2.555757 GCCACATATTCCCTTGATCAGC 59.444 50.000 0.00 0.00 0.00 4.26
367 377 4.096190 AGCCACATATTCCCTTGATCAG 57.904 45.455 0.00 0.00 0.00 2.90
368 378 5.645056 TTAGCCACATATTCCCTTGATCA 57.355 39.130 0.00 0.00 0.00 2.92
369 379 7.624549 TCTATTAGCCACATATTCCCTTGATC 58.375 38.462 0.00 0.00 0.00 2.92
370 380 7.574021 TCTATTAGCCACATATTCCCTTGAT 57.426 36.000 0.00 0.00 0.00 2.57
371 381 7.459125 AGATCTATTAGCCACATATTCCCTTGA 59.541 37.037 0.00 0.00 0.00 3.02
372 382 7.551974 CAGATCTATTAGCCACATATTCCCTTG 59.448 40.741 0.00 0.00 0.00 3.61
373 383 7.459125 TCAGATCTATTAGCCACATATTCCCTT 59.541 37.037 0.00 0.00 0.00 3.95
374 384 6.962311 TCAGATCTATTAGCCACATATTCCCT 59.038 38.462 0.00 0.00 0.00 4.20
375 385 7.187824 TCAGATCTATTAGCCACATATTCCC 57.812 40.000 0.00 0.00 0.00 3.97
376 386 9.678260 AAATCAGATCTATTAGCCACATATTCC 57.322 33.333 0.00 0.00 0.00 3.01
380 390 9.851686 AACAAAATCAGATCTATTAGCCACATA 57.148 29.630 0.00 0.00 0.00 2.29
381 391 8.757982 AACAAAATCAGATCTATTAGCCACAT 57.242 30.769 0.00 0.00 0.00 3.21
382 392 9.679661 TTAACAAAATCAGATCTATTAGCCACA 57.320 29.630 0.00 0.00 0.00 4.17
427 437 2.745821 CAAGAACCGCTTTACCTAACCC 59.254 50.000 0.00 0.00 33.60 4.11
446 457 2.280457 TGTCCACGATGCACGCAA 60.280 55.556 8.31 0.00 46.94 4.85
463 474 7.725251 TCATATGTCTTTTTCTTTTTGTGCCT 58.275 30.769 1.90 0.00 0.00 4.75
472 483 5.010282 ACGGGCTTCATATGTCTTTTTCTT 58.990 37.500 1.90 0.00 0.00 2.52
544 559 3.342269 CTTTATCGCATCACCGAAAACG 58.658 45.455 0.00 0.00 41.01 3.60
778 794 2.158158 TCAAAGTGGAGAGAGAAGGGGA 60.158 50.000 0.00 0.00 0.00 4.81
1050 1083 1.979155 GGCAAAGAGGAACTGGCCC 60.979 63.158 0.00 0.00 41.55 5.80
1152 1185 1.579429 GGCACAAATCGGAGCGTTT 59.421 52.632 0.00 0.00 0.00 3.60
1155 1188 2.436646 AGGGCACAAATCGGAGCG 60.437 61.111 0.00 0.00 0.00 5.03
1156 1189 1.078143 AGAGGGCACAAATCGGAGC 60.078 57.895 0.00 0.00 0.00 4.70
1157 1190 0.539051 AGAGAGGGCACAAATCGGAG 59.461 55.000 0.00 0.00 0.00 4.63
1158 1191 0.537188 GAGAGAGGGCACAAATCGGA 59.463 55.000 0.00 0.00 0.00 4.55
1159 1192 0.539051 AGAGAGAGGGCACAAATCGG 59.461 55.000 0.00 0.00 0.00 4.18
1160 1193 1.480137 AGAGAGAGAGGGCACAAATCG 59.520 52.381 0.00 0.00 0.00 3.34
1161 1194 2.765699 AGAGAGAGAGAGGGCACAAATC 59.234 50.000 0.00 0.00 0.00 2.17
1162 1195 2.765699 GAGAGAGAGAGAGGGCACAAAT 59.234 50.000 0.00 0.00 0.00 2.32
1163 1196 2.175202 GAGAGAGAGAGAGGGCACAAA 58.825 52.381 0.00 0.00 0.00 2.83
1164 1197 1.357420 AGAGAGAGAGAGAGGGCACAA 59.643 52.381 0.00 0.00 0.00 3.33
1165 1198 0.998928 AGAGAGAGAGAGAGGGCACA 59.001 55.000 0.00 0.00 0.00 4.57
1166 1199 1.212935 AGAGAGAGAGAGAGAGGGCAC 59.787 57.143 0.00 0.00 0.00 5.01
1167 1200 1.490490 GAGAGAGAGAGAGAGAGGGCA 59.510 57.143 0.00 0.00 0.00 5.36
1168 1201 1.771255 AGAGAGAGAGAGAGAGAGGGC 59.229 57.143 0.00 0.00 0.00 5.19
1169 1202 3.041211 TGAGAGAGAGAGAGAGAGAGGG 58.959 54.545 0.00 0.00 0.00 4.30
1170 1203 4.639334 CATGAGAGAGAGAGAGAGAGAGG 58.361 52.174 0.00 0.00 0.00 3.69
1270 1672 4.092091 TCAATGCCAACAAAACGAACAAAC 59.908 37.500 0.00 0.00 0.00 2.93
1272 1674 3.614616 GTCAATGCCAACAAAACGAACAA 59.385 39.130 0.00 0.00 0.00 2.83
1273 1675 3.119316 AGTCAATGCCAACAAAACGAACA 60.119 39.130 0.00 0.00 0.00 3.18
1274 1676 3.443976 AGTCAATGCCAACAAAACGAAC 58.556 40.909 0.00 0.00 0.00 3.95
1292 1694 2.917971 CAAGTACAGCGAGCAACTAGTC 59.082 50.000 0.00 0.00 0.00 2.59
1315 1717 1.124477 TGCCAAACATTTCCCCACCC 61.124 55.000 0.00 0.00 0.00 4.61
1455 1858 1.808945 CAGATTGTTCACTCCTGGTGC 59.191 52.381 0.00 0.00 44.98 5.01
1457 1860 1.352352 CCCAGATTGTTCACTCCTGGT 59.648 52.381 0.00 0.00 42.01 4.00
1577 1980 3.095912 TCCGACCCAGACAGATCTTTA 57.904 47.619 0.00 0.00 30.42 1.85
1590 1993 3.487120 AGCTATAAATGGTTCCGACCC 57.513 47.619 0.00 0.00 45.92 4.46
1675 2078 5.261040 TCTGGAAACTGAGATGGGATTTT 57.739 39.130 0.00 0.00 33.95 1.82
1810 2228 5.587844 GGCACTTCTGATACACATTTGATCT 59.412 40.000 0.00 0.00 0.00 2.75
1879 2297 6.270815 CAAATGCATGATCTGAAGGGTAAAG 58.729 40.000 0.00 0.00 0.00 1.85
1953 2376 4.084537 GGTAATACACGGATTGCTGAATCG 60.085 45.833 0.00 0.00 39.22 3.34
2086 2512 0.518636 CATCCTCGTGCACTTTGGTG 59.481 55.000 16.19 5.28 45.53 4.17
2107 2533 2.233922 ACACGCCTAGCACTTAATCTGT 59.766 45.455 0.00 0.00 0.00 3.41
2117 2543 1.043116 AGATAGCCACACGCCTAGCA 61.043 55.000 0.00 0.00 38.78 3.49
2129 2555 4.157105 GGCTACAAGCTCTAGTAGATAGCC 59.843 50.000 23.54 23.54 44.76 3.93
2202 2628 4.093998 CAGTTGATGACAGTATGGAGCAAC 59.906 45.833 0.00 0.00 44.33 4.17
2247 2673 1.977854 AGTACACATCTGGCCTTGACA 59.022 47.619 3.32 0.00 0.00 3.58
2252 2678 2.700897 GGATACAGTACACATCTGGCCT 59.299 50.000 3.32 0.00 37.25 5.19
2289 2715 0.179067 GGTCAGTGTCACGTTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
2313 2739 0.109342 CAGGTGGTTGAGCTCCTGTT 59.891 55.000 12.15 0.00 41.51 3.16
2350 2776 1.131826 GTGACCGCATGCGTTGTAC 59.868 57.895 35.55 24.12 37.81 2.90
2356 2782 2.582202 GAACATGGTGACCGCATGCG 62.582 60.000 32.60 32.60 39.44 4.73
2360 2786 0.948623 CGAAGAACATGGTGACCGCA 60.949 55.000 0.00 0.00 0.00 5.69
2383 2809 2.113860 ATAACAGCCAATCACAGCGT 57.886 45.000 0.00 0.00 0.00 5.07
2393 2819 7.701539 ACAACAGAATATCAAATAACAGCCA 57.298 32.000 0.00 0.00 0.00 4.75
2448 2874 2.366916 CCAGGAACTCATAGCGGAAGAT 59.633 50.000 0.00 0.00 34.60 2.40
2521 3037 2.811317 GCTTGACGCGAGGTGGAG 60.811 66.667 15.93 2.63 0.00 3.86
2552 3068 1.073284 GGCACTAGGGTGGAGACAAAA 59.927 52.381 0.00 0.00 46.06 2.44
2553 3069 0.690762 GGCACTAGGGTGGAGACAAA 59.309 55.000 0.00 0.00 46.06 2.83
2575 3091 1.890489 TGTTGGCGCTGACTACTAGAA 59.110 47.619 7.64 0.00 0.00 2.10
2593 3109 2.748058 GATGCCCGTTGGACACCTGT 62.748 60.000 0.00 0.00 0.00 4.00
2637 3153 1.412361 GGAGAGGGAGATGGTAGCAGT 60.412 57.143 0.00 0.00 0.00 4.40
2639 3155 0.937441 AGGAGAGGGAGATGGTAGCA 59.063 55.000 0.00 0.00 0.00 3.49
2641 3157 3.885976 TGTAGGAGAGGGAGATGGTAG 57.114 52.381 0.00 0.00 0.00 3.18
2757 3273 4.097361 GGCCCGACCCACCTTCTC 62.097 72.222 0.00 0.00 0.00 2.87
2762 3278 4.717313 GTTCAGGCCCGACCCACC 62.717 72.222 0.00 0.00 40.58 4.61
2768 3284 1.302511 GAGCTTTGTTCAGGCCCGA 60.303 57.895 0.00 0.00 0.00 5.14
2856 3372 4.074526 GCGCTCTCACCCTGCAGA 62.075 66.667 17.39 0.00 0.00 4.26
2878 3394 2.363147 GTGGAGGAGCCCGTCTCT 60.363 66.667 2.59 0.00 41.60 3.10
2917 3433 0.882042 ACTGTTGACGCCTCAAGCAG 60.882 55.000 17.63 17.63 44.04 4.24
2923 3439 1.805945 CGCCTACTGTTGACGCCTC 60.806 63.158 0.00 0.00 0.00 4.70
2924 3440 2.261671 CGCCTACTGTTGACGCCT 59.738 61.111 0.00 0.00 0.00 5.52
2956 3472 0.331278 TCCAATGCCCATTCGAAGGT 59.669 50.000 9.21 0.00 0.00 3.50
2961 3477 2.358898 CCTTACTTCCAATGCCCATTCG 59.641 50.000 0.00 0.00 0.00 3.34
2964 3480 2.738743 CACCTTACTTCCAATGCCCAT 58.261 47.619 0.00 0.00 0.00 4.00
2965 3481 1.890573 GCACCTTACTTCCAATGCCCA 60.891 52.381 0.00 0.00 0.00 5.36
3005 3885 1.493022 ACAGCTGACCACTTACCCAAA 59.507 47.619 23.35 0.00 0.00 3.28
3093 3983 1.706995 TTTTCACCCCGCCCTGTGTA 61.707 55.000 0.00 0.00 34.14 2.90
3096 3986 1.606313 CATTTTCACCCCGCCCTGT 60.606 57.895 0.00 0.00 0.00 4.00
3098 3988 2.037208 CCATTTTCACCCCGCCCT 59.963 61.111 0.00 0.00 0.00 5.19
3116 4006 2.280524 CGTTCAGGGACGCCAACA 60.281 61.111 0.00 0.00 36.12 3.33
3131 4021 2.669569 ATTGTTGCAGCCGCTCGT 60.670 55.556 0.00 0.00 39.64 4.18
3137 4027 1.005867 CACACCCATTGTTGCAGCC 60.006 57.895 0.00 0.00 35.67 4.85
3154 4044 4.720902 CACCATGAGCGCCCCACA 62.721 66.667 2.29 0.00 0.00 4.17
3170 4060 4.398319 GTTCAAATCCTTCTCACCTTCCA 58.602 43.478 0.00 0.00 0.00 3.53
3183 4073 4.403453 CGTTTTCATCCTCGTTCAAATCC 58.597 43.478 0.00 0.00 0.00 3.01
3193 4083 1.087501 GCCACTCCGTTTTCATCCTC 58.912 55.000 0.00 0.00 0.00 3.71
3225 4115 4.785511 TGTTTCCGTTTTTCTGTGGAAA 57.214 36.364 1.36 1.36 45.55 3.13
3300 4205 0.732571 CCGTTTCCATGGATGTTCCG 59.267 55.000 17.06 12.79 40.17 4.30
3339 4244 1.068610 CGTCGCCATGGTCAAAACATT 60.069 47.619 14.67 0.00 0.00 2.71
3340 4245 0.521291 CGTCGCCATGGTCAAAACAT 59.479 50.000 14.67 0.00 0.00 2.71
3359 4264 4.717313 GTCTTCACCCCGCCCCAC 62.717 72.222 0.00 0.00 0.00 4.61
3378 4283 4.467084 GCTCGGGGATGCCAACGA 62.467 66.667 5.30 4.93 34.40 3.85
3402 4588 1.138036 CATGCACCCATTGTCGCAG 59.862 57.895 0.00 0.00 35.48 5.18
3439 4625 3.747852 TCCTAGTTCAAATCCTCCCCAT 58.252 45.455 0.00 0.00 0.00 4.00
3444 4630 6.183360 CCGTTTTCATCCTAGTTCAAATCCTC 60.183 42.308 0.00 0.00 0.00 3.71
3494 4680 5.673337 TTCACTCTGTTTCTGATTTTCCG 57.327 39.130 0.00 0.00 0.00 4.30
3501 4688 8.612619 GTTTCTGTATTTTCACTCTGTTTCTGA 58.387 33.333 0.00 0.00 0.00 3.27
3502 4689 7.857885 GGTTTCTGTATTTTCACTCTGTTTCTG 59.142 37.037 0.00 0.00 0.00 3.02
3503 4690 7.556275 TGGTTTCTGTATTTTCACTCTGTTTCT 59.444 33.333 0.00 0.00 0.00 2.52
3510 4697 8.188139 TCTGTTTTGGTTTCTGTATTTTCACTC 58.812 33.333 0.00 0.00 0.00 3.51
3523 4710 9.092876 TGTTTCACAATATTCTGTTTTGGTTTC 57.907 29.630 0.00 0.00 0.00 2.78
3550 4737 6.645705 GGAAAACGTGTTCCATTTCAATTTC 58.354 36.000 29.14 11.49 45.57 2.17
3565 4752 4.006989 TGGATATTCCACAGGAAAACGTG 58.993 43.478 2.16 0.00 45.41 4.49
3955 5145 4.968788 TCCGTTTTTGTTTCCGTATTTTCG 59.031 37.500 0.00 0.00 0.00 3.46
3976 5166 3.163594 CGATTTCGTTTCACAGCATTCC 58.836 45.455 0.00 0.00 34.11 3.01
3982 5172 4.083537 TCCATTTCCGATTTCGTTTCACAG 60.084 41.667 0.00 0.00 37.74 3.66
3985 5175 5.637006 ATTCCATTTCCGATTTCGTTTCA 57.363 34.783 0.00 0.00 37.74 2.69
3995 5185 4.094294 CAGAAAACGCTATTCCATTTCCGA 59.906 41.667 0.00 0.00 31.91 4.55
4007 5197 2.215196 GTGTTCCACCAGAAAACGCTA 58.785 47.619 0.00 0.00 33.01 4.26
4009 5199 3.544615 GTGTTCCACCAGAAAACGC 57.455 52.632 0.00 0.00 33.01 4.84
4086 5276 1.675641 GCAATGCCGTCTTCACCCT 60.676 57.895 0.00 0.00 0.00 4.34
4096 5286 2.046023 TCAGGGACAGCAATGCCG 60.046 61.111 0.00 0.00 34.68 5.69
4100 5290 0.035630 GCTCACTCAGGGACAGCAAT 60.036 55.000 0.00 0.00 0.00 3.56
4105 5295 3.695606 GCCGCTCACTCAGGGACA 61.696 66.667 0.00 0.00 37.22 4.02
4127 5317 2.996734 GCCCCACACACCCATTGG 60.997 66.667 0.00 0.00 37.80 3.16
4201 5391 2.273538 TTTTCCGTGGAAAATCCCGA 57.726 45.000 20.07 0.46 45.59 5.14
4241 5432 5.105752 TCACAAATTTTGTCTTGGTTTCCG 58.894 37.500 11.78 0.00 43.23 4.30
4251 5442 8.207521 TCAATTTCCCTTTCACAAATTTTGTC 57.792 30.769 11.78 0.00 43.23 3.18
4255 5446 8.631797 CCATTTCAATTTCCCTTTCACAAATTT 58.368 29.630 0.00 0.00 29.17 1.82
4294 5485 0.668096 TTTCCGTCGATGTTCCACCG 60.668 55.000 3.52 0.00 0.00 4.94
4310 5501 7.321745 AGTTTCATATTCAAGGATCCGTTTC 57.678 36.000 5.98 0.00 0.00 2.78
4363 5554 1.213094 CCACACGTCGTCTTCACCAC 61.213 60.000 0.00 0.00 0.00 4.16
4377 5568 2.030562 CACTCGGGGACACCACAC 59.969 66.667 0.00 0.00 40.22 3.82
4378 5569 2.123208 TCACTCGGGGACACCACA 60.123 61.111 0.00 0.00 40.22 4.17
4401 5593 1.394917 CAAATCCTTCTCACTTCCGCG 59.605 52.381 0.00 0.00 0.00 6.46
4406 5598 6.688073 TCCTAGTTCAAATCCTTCTCACTT 57.312 37.500 0.00 0.00 0.00 3.16
4408 5600 6.644347 TCATCCTAGTTCAAATCCTTCTCAC 58.356 40.000 0.00 0.00 0.00 3.51
4411 5603 8.964772 CATTTTCATCCTAGTTCAAATCCTTCT 58.035 33.333 0.00 0.00 0.00 2.85
4422 5644 5.779241 TCCACTCCATTTTCATCCTAGTT 57.221 39.130 0.00 0.00 0.00 2.24
4431 5653 5.243730 TCCAGACAATTTCCACTCCATTTTC 59.756 40.000 0.00 0.00 0.00 2.29
4439 5661 5.728637 GGAAAATCCAGACAATTTCCACT 57.271 39.130 10.41 0.00 46.43 4.00
4478 5700 8.244802 TCCTTTTTGTTTTCGTATTTTCACTCA 58.755 29.630 0.00 0.00 0.00 3.41
4508 5730 2.223144 TCCATTTTCGTCAGTTTCGCAG 59.777 45.455 0.00 0.00 0.00 5.18
4514 5736 5.068460 TGTTCCATTTCCATTTTCGTCAGTT 59.932 36.000 0.00 0.00 0.00 3.16
4516 5738 5.119931 TGTTCCATTTCCATTTTCGTCAG 57.880 39.130 0.00 0.00 0.00 3.51
4517 5739 4.582656 ACTGTTCCATTTCCATTTTCGTCA 59.417 37.500 0.00 0.00 0.00 4.35
4522 5746 6.542005 GGAAAACACTGTTCCATTTCCATTTT 59.458 34.615 14.44 0.00 45.29 1.82
4526 5750 3.067461 CGGAAAACACTGTTCCATTTCCA 59.933 43.478 17.54 0.00 45.93 3.53
4540 5764 1.065345 TGTCTGTTCCACCGGAAAACA 60.065 47.619 9.46 14.18 43.86 2.83
4558 5782 0.677288 TCACAGATCCGTTTCCGTGT 59.323 50.000 0.00 0.00 0.00 4.49
4561 5785 3.123804 CCTATTCACAGATCCGTTTCCG 58.876 50.000 0.00 0.00 0.00 4.30
4597 5821 2.112297 AACCCGCGTCACAATGGT 59.888 55.556 4.92 0.00 0.00 3.55
4598 5822 2.560861 CAACCCGCGTCACAATGG 59.439 61.111 4.92 0.00 0.00 3.16
4600 5824 2.671619 CCCAACCCGCGTCACAAT 60.672 61.111 4.92 0.00 0.00 2.71
4601 5825 4.939368 CCCCAACCCGCGTCACAA 62.939 66.667 4.92 0.00 0.00 3.33
4629 5854 4.467084 TCGCTCGGGGATGCCAAC 62.467 66.667 5.30 0.00 0.00 3.77
4667 5892 2.044806 GACCGCTATGAGTGCCCCAT 62.045 60.000 0.00 0.00 0.00 4.00
4674 5899 0.324368 TCCCACAGACCGCTATGAGT 60.324 55.000 0.00 0.00 0.00 3.41
4680 5905 3.322466 CCCTTCCCACAGACCGCT 61.322 66.667 0.00 0.00 0.00 5.52
4685 5910 1.850345 AGTTCAAACCCTTCCCACAGA 59.150 47.619 0.00 0.00 0.00 3.41
4687 5912 2.107552 CCTAGTTCAAACCCTTCCCACA 59.892 50.000 0.00 0.00 0.00 4.17
4697 5922 7.308435 CACTCCATTTTCATCCTAGTTCAAAC 58.692 38.462 0.00 0.00 0.00 2.93
4738 5963 3.568007 TCTGTTTCCGTTTTTCCATGGAG 59.432 43.478 15.53 2.47 33.15 3.86
4742 5967 4.204012 TCACTCTGTTTCCGTTTTTCCAT 58.796 39.130 0.00 0.00 0.00 3.41
4746 5971 7.700656 CAGTATTTTCACTCTGTTTCCGTTTTT 59.299 33.333 0.00 0.00 0.00 1.94
4777 6002 5.290386 TCCGTTTTGCAATATTCCGTTTTT 58.710 33.333 0.00 0.00 0.00 1.94
4811 6042 1.104577 GGCTGTTCCACCGGAAAACA 61.105 55.000 9.46 14.18 43.86 2.83
4862 6093 5.047377 CCACATTGTAGCCATGGTAAAAACT 60.047 40.000 14.67 2.89 0.00 2.66
4875 6106 1.339055 TGGACTGAGCCACATTGTAGC 60.339 52.381 0.00 0.00 31.66 3.58
4880 6111 0.607489 GTGCTGGACTGAGCCACATT 60.607 55.000 0.00 0.00 38.28 2.71
4924 6155 7.604927 TCTGTTAGGTATTGGTGTTGTCATTAC 59.395 37.037 0.00 0.00 0.00 1.89
4937 6168 4.887655 GGTTGGGGATTCTGTTAGGTATTG 59.112 45.833 0.00 0.00 0.00 1.90
4955 6186 4.336433 GGACAATACAGTGATGATGGTTGG 59.664 45.833 0.00 0.00 0.00 3.77
4958 6189 4.384537 CCTGGACAATACAGTGATGATGGT 60.385 45.833 0.00 0.00 34.16 3.55
4964 6195 2.171448 GGCTCCTGGACAATACAGTGAT 59.829 50.000 0.00 0.00 34.16 3.06
4969 6200 5.450818 AATAAAGGCTCCTGGACAATACA 57.549 39.130 0.00 0.00 0.00 2.29
4970 6201 5.067805 CCAAATAAAGGCTCCTGGACAATAC 59.932 44.000 0.00 0.00 0.00 1.89
4987 6218 1.528292 AAACCAGCCGCGCCAAATAA 61.528 50.000 0.00 0.00 0.00 1.40
4989 6220 1.319614 ATAAACCAGCCGCGCCAAAT 61.320 50.000 0.00 0.00 0.00 2.32
5020 6252 3.330701 ACCTTTTGATGACTCCTAAGCCA 59.669 43.478 0.00 0.00 0.00 4.75
5079 6311 2.730928 CGCAGCAAAACAATTGGGTAAG 59.269 45.455 10.83 0.00 0.00 2.34
5082 6314 3.287482 CGCAGCAAAACAATTGGGT 57.713 47.368 10.83 0.00 0.00 4.51
5166 6438 9.853555 CTGCCACATTTGTTTTCATAACTAATA 57.146 29.630 0.00 0.00 0.00 0.98
5170 6442 4.990426 GCTGCCACATTTGTTTTCATAACT 59.010 37.500 0.00 0.00 0.00 2.24
5213 6485 3.576078 AATATGGATGGAAACGGAGCA 57.424 42.857 0.00 0.00 0.00 4.26
5352 6624 0.460811 GTGATCGGCACTCATCTGCA 60.461 55.000 2.66 0.00 44.27 4.41
5353 6625 1.485838 CGTGATCGGCACTCATCTGC 61.486 60.000 7.54 0.00 45.49 4.26
5393 6665 1.954146 CGTACAGGTGCACGCACTT 60.954 57.895 20.65 11.55 45.52 3.16
5447 6719 1.342174 GAAACCCGGTACAGACTCACA 59.658 52.381 0.00 0.00 0.00 3.58
5459 6731 4.700213 AGTGATTGAATGTTAGAAACCCGG 59.300 41.667 0.00 0.00 0.00 5.73
5519 6791 3.214328 CTTAACAGACTGGCAGGTTTGT 58.786 45.455 20.34 16.00 36.34 2.83
5525 6797 6.970484 ACAATTTTACTTAACAGACTGGCAG 58.030 36.000 14.16 14.16 0.00 4.85
5583 6855 6.102663 AGCTATGACACACAGAACAAGATAC 58.897 40.000 0.00 0.00 0.00 2.24
5678 6950 0.323633 CCCATGGCAGGTGTCATTGA 60.324 55.000 6.09 0.00 38.49 2.57
5697 6969 2.853594 CACGCATACACAAATGAATGCC 59.146 45.455 11.55 0.00 41.29 4.40
5720 6992 9.855021 GGTTGCATTTACAAATGTTCTATAAGT 57.145 29.630 14.42 0.00 45.77 2.24
5737 7009 1.006998 TGGCCATAGGAGGTTGCATTT 59.993 47.619 0.00 0.00 0.00 2.32
5738 7010 0.630673 TGGCCATAGGAGGTTGCATT 59.369 50.000 0.00 0.00 0.00 3.56
5746 7018 5.745312 TTATCACTACATGGCCATAGGAG 57.255 43.478 20.30 20.08 0.00 3.69
5751 7023 7.005902 TGATGAATTTATCACTACATGGCCAT 58.994 34.615 14.09 14.09 41.93 4.40
5797 7069 6.308766 GCATGTTGTAAGTTTTATGAAGGCTG 59.691 38.462 0.00 0.00 0.00 4.85
5810 7084 7.230510 TGGAACAAATTAGAGCATGTTGTAAGT 59.769 33.333 5.44 0.00 36.22 2.24
5896 7170 5.184479 ACACAAATTAGAGCATGTTGAGCAT 59.816 36.000 0.00 0.00 38.60 3.79
5897 7171 4.520111 ACACAAATTAGAGCATGTTGAGCA 59.480 37.500 0.00 0.00 0.00 4.26
5898 7172 5.051891 ACACAAATTAGAGCATGTTGAGC 57.948 39.130 0.00 0.00 0.00 4.26
5899 7173 7.584108 TGTTACACAAATTAGAGCATGTTGAG 58.416 34.615 0.00 0.00 0.00 3.02
5900 7174 7.503521 TGTTACACAAATTAGAGCATGTTGA 57.496 32.000 0.00 0.00 0.00 3.18
5933 7207 8.352201 CCAATTCACAATCTGAGAGTTAAAACA 58.648 33.333 0.00 0.00 0.00 2.83
5934 7208 8.352942 ACCAATTCACAATCTGAGAGTTAAAAC 58.647 33.333 0.00 0.00 0.00 2.43
6073 7347 2.565841 ACAGCACTGTTGAGTTCCTTC 58.434 47.619 0.00 0.00 41.83 3.46
6200 7474 5.007626 GGTTTCTGGTTTGGCTTTCAAATTC 59.992 40.000 0.00 0.00 45.79 2.17
6502 7776 3.750371 TGCCTAACATGTGTTTACTGCT 58.250 40.909 0.00 0.00 39.31 4.24
6503 7777 4.701956 ATGCCTAACATGTGTTTACTGC 57.298 40.909 0.00 3.38 37.70 4.40
6504 7778 9.638239 AAAATAATGCCTAACATGTGTTTACTG 57.362 29.630 0.00 0.00 39.60 2.74
6505 7779 9.638239 CAAAATAATGCCTAACATGTGTTTACT 57.362 29.630 0.00 0.00 39.60 2.24
6506 7780 9.632807 TCAAAATAATGCCTAACATGTGTTTAC 57.367 29.630 0.00 0.00 39.60 2.01
6519 7793 8.458843 GCGGTTACATATATCAAAATAATGCCT 58.541 33.333 0.00 0.00 0.00 4.75
6520 7794 8.240682 TGCGGTTACATATATCAAAATAATGCC 58.759 33.333 0.00 0.00 0.00 4.40
6521 7795 9.787532 ATGCGGTTACATATATCAAAATAATGC 57.212 29.630 0.00 0.00 0.00 3.56
6543 7942 8.249327 AGATTGCTGTCTTAATATAAGATGCG 57.751 34.615 16.02 6.39 34.05 4.73
6704 8110 8.462016 CCTCAAATTGGTTCTAATTAACTGGAG 58.538 37.037 0.00 0.00 30.47 3.86
6854 8298 6.852853 GCATAACATGTTTTCATAGACATCCG 59.147 38.462 17.78 0.00 38.64 4.18
6858 8302 7.066163 CAGAGGCATAACATGTTTTCATAGACA 59.934 37.037 17.78 0.00 38.64 3.41
6859 8303 7.280876 TCAGAGGCATAACATGTTTTCATAGAC 59.719 37.037 17.78 0.00 38.64 2.59
6860 8304 7.337938 TCAGAGGCATAACATGTTTTCATAGA 58.662 34.615 17.78 3.60 38.64 1.98
6861 8305 7.558161 TCAGAGGCATAACATGTTTTCATAG 57.442 36.000 17.78 0.00 38.64 2.23
6863 8307 6.379133 ACATCAGAGGCATAACATGTTTTCAT 59.621 34.615 17.78 0.96 41.78 2.57
6865 8309 6.199937 ACATCAGAGGCATAACATGTTTTC 57.800 37.500 17.78 6.17 0.00 2.29
7143 8591 5.359576 ACAGACAGAGCTCCTACAAATCTAG 59.640 44.000 10.93 2.01 0.00 2.43
7230 8678 9.995003 CTATTCTCTGGAATTAGCAGTCTATTT 57.005 33.333 0.00 0.00 41.75 1.40
7306 8754 1.132643 CCGAAACACCGAAACACCAAA 59.867 47.619 0.00 0.00 0.00 3.28
7307 8755 0.733729 CCGAAACACCGAAACACCAA 59.266 50.000 0.00 0.00 0.00 3.67
7308 8756 1.096386 CCCGAAACACCGAAACACCA 61.096 55.000 0.00 0.00 0.00 4.17
7309 8757 1.650363 CCCGAAACACCGAAACACC 59.350 57.895 0.00 0.00 0.00 4.16
7310 8758 1.009335 GCCCGAAACACCGAAACAC 60.009 57.895 0.00 0.00 0.00 3.32
7311 8759 2.188161 GGCCCGAAACACCGAAACA 61.188 57.895 0.00 0.00 0.00 2.83
7312 8760 1.726533 TTGGCCCGAAACACCGAAAC 61.727 55.000 0.00 0.00 0.00 2.78
7313 8761 1.453379 TTGGCCCGAAACACCGAAA 60.453 52.632 0.00 0.00 0.00 3.46
7317 8765 0.674269 TATCGTTGGCCCGAAACACC 60.674 55.000 8.21 0.00 40.73 4.16
7332 8780 4.081862 TCCACACTAGGAACCAAGTTATCG 60.082 45.833 0.00 0.00 33.93 2.92
7348 8796 1.486310 TCAACAGCAAGACTCCACACT 59.514 47.619 0.00 0.00 0.00 3.55
7351 8799 2.771089 TGATCAACAGCAAGACTCCAC 58.229 47.619 0.00 0.00 0.00 4.02
7370 8818 6.757947 CCATATTAACTGGGCAAAATGACTTG 59.242 38.462 0.00 0.00 0.00 3.16
7373 8821 5.049828 GCCATATTAACTGGGCAAAATGAC 58.950 41.667 7.93 0.00 45.70 3.06
7404 8852 4.335400 TTTTCTGATTTTTGACCAGGGC 57.665 40.909 0.00 0.00 0.00 5.19
7406 8854 7.306749 CGTCAATTTTTCTGATTTTTGACCAGG 60.307 37.037 7.73 0.00 39.66 4.45
7419 8867 7.541783 TGATATTTTCCAGCGTCAATTTTTCTG 59.458 33.333 0.00 0.00 0.00 3.02
7428 8876 8.050778 ACTTTTTATGATATTTTCCAGCGTCA 57.949 30.769 0.00 0.00 0.00 4.35
7461 8909 8.836268 AGTAAATTACGTGGTAGAACATCAAA 57.164 30.769 0.00 0.00 0.00 2.69
7462 8910 7.546667 GGAGTAAATTACGTGGTAGAACATCAA 59.453 37.037 0.00 0.00 0.00 2.57
7463 8911 7.037438 GGAGTAAATTACGTGGTAGAACATCA 58.963 38.462 0.00 0.00 0.00 3.07
7472 8920 5.613329 TCTGTTTGGAGTAAATTACGTGGT 58.387 37.500 0.00 0.00 0.00 4.16
7474 8922 7.537306 CCATTTCTGTTTGGAGTAAATTACGTG 59.463 37.037 0.00 0.00 34.81 4.49
7485 8937 2.242043 AGCCACCATTTCTGTTTGGAG 58.758 47.619 0.00 0.00 36.79 3.86
7515 8967 0.725686 CTCGCAATCCTTGTGCTCAG 59.274 55.000 0.00 0.00 40.84 3.35
7516 8968 0.321346 TCTCGCAATCCTTGTGCTCA 59.679 50.000 0.00 0.00 40.84 4.26
7537 8989 6.535508 CCTGACACTAGGTTAGATAGTTTTGC 59.464 42.308 0.00 0.00 35.20 3.68
7549 9001 1.073763 TGCAATGCCTGACACTAGGTT 59.926 47.619 1.53 0.00 40.11 3.50
7555 9007 2.035066 AGACTTTTGCAATGCCTGACAC 59.965 45.455 1.53 0.00 0.00 3.67
7591 9043 7.234187 TGTTCGATATCTGTATGCTTTTCAC 57.766 36.000 0.34 0.00 0.00 3.18
7604 9056 7.517614 TCAGATAAAGAGCTGTTCGATATCT 57.482 36.000 9.43 9.43 40.16 1.98
7622 9074 2.028876 TGTCCGCGGATTCTTCAGATA 58.971 47.619 33.58 0.00 0.00 1.98
7627 9079 1.327764 GTCATTGTCCGCGGATTCTTC 59.672 52.381 33.58 18.74 0.00 2.87
7637 9089 1.872952 TCTGTTGCAAGTCATTGTCCG 59.127 47.619 0.00 0.00 38.76 4.79
7655 9107 6.539103 GGAATTATAGCACTTTCGGAGTTTCT 59.461 38.462 0.00 0.00 36.10 2.52
7671 9123 5.543507 ACTGGTGAGAGCTGGAATTATAG 57.456 43.478 0.00 0.00 0.00 1.31
7683 9135 0.946221 GGTCGTGCAACTGGTGAGAG 60.946 60.000 0.00 0.00 31.75 3.20
7708 9161 1.384222 GCGCTGTAATTTCCAGGGGG 61.384 60.000 17.71 0.00 41.64 5.40
7778 9232 0.878416 TGGAATGCGGCTGTGTAAAC 59.122 50.000 0.00 0.00 0.00 2.01
7827 9281 9.388506 CCTTGTAGAATTGTAGATCACTGAATT 57.611 33.333 0.00 0.00 0.00 2.17
7828 9282 8.762645 TCCTTGTAGAATTGTAGATCACTGAAT 58.237 33.333 0.00 0.00 0.00 2.57
7834 9288 9.567776 TTGTTTTCCTTGTAGAATTGTAGATCA 57.432 29.630 0.00 0.00 0.00 2.92
7841 9295 9.626045 GGTTAGATTGTTTTCCTTGTAGAATTG 57.374 33.333 0.00 0.00 0.00 2.32
7844 9298 7.996644 ACTGGTTAGATTGTTTTCCTTGTAGAA 59.003 33.333 0.00 0.00 0.00 2.10
7846 9300 7.094762 GGACTGGTTAGATTGTTTTCCTTGTAG 60.095 40.741 0.00 0.00 0.00 2.74
7847 9301 6.713450 GGACTGGTTAGATTGTTTTCCTTGTA 59.287 38.462 0.00 0.00 0.00 2.41
7848 9302 5.535030 GGACTGGTTAGATTGTTTTCCTTGT 59.465 40.000 0.00 0.00 0.00 3.16
7849 9303 5.048013 GGGACTGGTTAGATTGTTTTCCTTG 60.048 44.000 0.00 0.00 0.00 3.61
7850 9304 5.077564 GGGACTGGTTAGATTGTTTTCCTT 58.922 41.667 0.00 0.00 0.00 3.36
7851 9305 4.663334 GGGACTGGTTAGATTGTTTTCCT 58.337 43.478 0.00 0.00 0.00 3.36
7853 9307 4.070009 ACGGGACTGGTTAGATTGTTTTC 58.930 43.478 0.00 0.00 0.00 2.29
7864 9318 1.052124 TTCTGTGGACGGGACTGGTT 61.052 55.000 0.00 0.00 0.00 3.67
7884 9338 0.243095 ACCTCTTGTAACTCGACGGC 59.757 55.000 0.00 0.00 0.00 5.68
7886 9340 3.058708 TGTGTACCTCTTGTAACTCGACG 60.059 47.826 0.00 0.00 0.00 5.12
7888 9342 4.392047 TCTGTGTACCTCTTGTAACTCGA 58.608 43.478 0.00 0.00 0.00 4.04
7889 9343 4.379603 CCTCTGTGTACCTCTTGTAACTCG 60.380 50.000 0.00 0.00 0.00 4.18
7939 9393 3.794717 CAGACACAGATGAGAAGATGGG 58.205 50.000 0.00 0.00 0.00 4.00
7940 9394 3.118702 AGCAGACACAGATGAGAAGATGG 60.119 47.826 0.00 0.00 0.00 3.51
8021 9478 0.317479 AACGACTGTGGGCTGTAGAC 59.683 55.000 0.00 0.00 0.00 2.59
8024 9481 1.369692 CCAACGACTGTGGGCTGTA 59.630 57.895 0.00 0.00 30.66 2.74
8096 9555 0.654683 CGCTAGTTTGCTCATCCTGC 59.345 55.000 0.00 0.00 0.00 4.85
8121 9580 0.749049 TCATGAGATCTGGGCGAGTG 59.251 55.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.