Multiple sequence alignment - TraesCS3B01G393100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G393100 chr3B 100.000 2480 0 0 1 2480 618619750 618617271 0.000000e+00 4580
1 TraesCS3B01G393100 chr3B 89.610 154 13 3 746 897 232645252 232645404 2.520000e-45 193
2 TraesCS3B01G393100 chr4B 91.455 749 55 1 7 746 529304206 529303458 0.000000e+00 1020
3 TraesCS3B01G393100 chr4B 89.744 156 13 3 749 902 315052128 315052282 1.950000e-46 196
4 TraesCS3B01G393100 chr7B 90.993 755 58 2 1 746 495120952 495121705 0.000000e+00 1009
5 TraesCS3B01G393100 chr2D 90.621 757 61 2 1 747 466617144 466617900 0.000000e+00 996
6 TraesCS3B01G393100 chr2D 93.627 612 37 1 896 1505 308681983 308681372 0.000000e+00 913
7 TraesCS3B01G393100 chr2D 93.464 612 38 1 896 1505 308678552 308677941 0.000000e+00 907
8 TraesCS3B01G393100 chr2B 90.596 755 61 2 1 745 592628216 592627462 0.000000e+00 992
9 TraesCS3B01G393100 chr2B 90.199 755 63 7 1 746 641697384 641698136 0.000000e+00 974
10 TraesCS3B01G393100 chr2B 92.683 615 42 2 896 1507 793363717 793364331 0.000000e+00 883
11 TraesCS3B01G393100 chr7D 90.331 755 63 5 1 745 364071725 364070971 0.000000e+00 981
12 TraesCS3B01G393100 chr7D 90.254 749 67 2 1 744 319510850 319511597 0.000000e+00 974
13 TraesCS3B01G393100 chr7D 90.000 150 12 3 746 893 407131472 407131620 9.050000e-45 191
14 TraesCS3B01G393100 chr3D 89.934 755 66 6 1 746 206671820 206672573 0.000000e+00 965
15 TraesCS3B01G393100 chr3D 80.973 473 48 17 1516 1971 465038679 465038232 1.100000e-88 337
16 TraesCS3B01G393100 chr3D 90.000 150 12 3 746 893 100585926 100586074 9.050000e-45 191
17 TraesCS3B01G393100 chr5A 89.920 754 66 2 1 745 120788909 120788157 0.000000e+00 963
18 TraesCS3B01G393100 chr5D 92.985 613 41 1 896 1506 383586731 383587343 0.000000e+00 893
19 TraesCS3B01G393100 chr5D 92.951 610 39 2 896 1503 473453096 473453703 0.000000e+00 885
20 TraesCS3B01G393100 chr1A 92.951 610 41 1 896 1503 213936425 213937034 0.000000e+00 887
21 TraesCS3B01G393100 chr4D 92.822 613 41 2 896 1506 469445079 469444468 0.000000e+00 885
22 TraesCS3B01G393100 chr4D 89.744 156 12 4 746 899 358496648 358496495 1.950000e-46 196
23 TraesCS3B01G393100 chr6D 92.799 611 42 1 896 1504 338920423 338921033 0.000000e+00 883
24 TraesCS3B01G393100 chr6D 90.066 151 12 3 745 893 421146186 421146335 2.520000e-45 193
25 TraesCS3B01G393100 chr5B 91.987 624 47 2 896 1517 677678161 677678783 0.000000e+00 872
26 TraesCS3B01G393100 chr5B 90.541 148 12 2 746 892 594628201 594628347 7.000000e-46 195
27 TraesCS3B01G393100 chr5B 90.000 150 12 3 746 893 280384983 280385131 9.050000e-45 191
28 TraesCS3B01G393100 chr5B 90.000 150 12 3 746 893 419385519 419385371 9.050000e-45 191
29 TraesCS3B01G393100 chr3A 85.000 460 58 7 1829 2284 608375857 608375405 8.080000e-125 457
30 TraesCS3B01G393100 chr3A 83.258 221 20 5 1582 1789 608377427 608377211 1.170000e-43 187


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G393100 chr3B 618617271 618619750 2479 True 4580 4580 100.0000 1 2480 1 chr3B.!!$R1 2479
1 TraesCS3B01G393100 chr4B 529303458 529304206 748 True 1020 1020 91.4550 7 746 1 chr4B.!!$R1 739
2 TraesCS3B01G393100 chr7B 495120952 495121705 753 False 1009 1009 90.9930 1 746 1 chr7B.!!$F1 745
3 TraesCS3B01G393100 chr2D 466617144 466617900 756 False 996 996 90.6210 1 747 1 chr2D.!!$F1 746
4 TraesCS3B01G393100 chr2D 308677941 308681983 4042 True 910 913 93.5455 896 1505 2 chr2D.!!$R1 609
5 TraesCS3B01G393100 chr2B 592627462 592628216 754 True 992 992 90.5960 1 745 1 chr2B.!!$R1 744
6 TraesCS3B01G393100 chr2B 641697384 641698136 752 False 974 974 90.1990 1 746 1 chr2B.!!$F1 745
7 TraesCS3B01G393100 chr2B 793363717 793364331 614 False 883 883 92.6830 896 1507 1 chr2B.!!$F2 611
8 TraesCS3B01G393100 chr7D 364070971 364071725 754 True 981 981 90.3310 1 745 1 chr7D.!!$R1 744
9 TraesCS3B01G393100 chr7D 319510850 319511597 747 False 974 974 90.2540 1 744 1 chr7D.!!$F1 743
10 TraesCS3B01G393100 chr3D 206671820 206672573 753 False 965 965 89.9340 1 746 1 chr3D.!!$F2 745
11 TraesCS3B01G393100 chr5A 120788157 120788909 752 True 963 963 89.9200 1 745 1 chr5A.!!$R1 744
12 TraesCS3B01G393100 chr5D 383586731 383587343 612 False 893 893 92.9850 896 1506 1 chr5D.!!$F1 610
13 TraesCS3B01G393100 chr5D 473453096 473453703 607 False 885 885 92.9510 896 1503 1 chr5D.!!$F2 607
14 TraesCS3B01G393100 chr1A 213936425 213937034 609 False 887 887 92.9510 896 1503 1 chr1A.!!$F1 607
15 TraesCS3B01G393100 chr4D 469444468 469445079 611 True 885 885 92.8220 896 1506 1 chr4D.!!$R2 610
16 TraesCS3B01G393100 chr6D 338920423 338921033 610 False 883 883 92.7990 896 1504 1 chr6D.!!$F1 608
17 TraesCS3B01G393100 chr5B 677678161 677678783 622 False 872 872 91.9870 896 1517 1 chr5B.!!$F3 621
18 TraesCS3B01G393100 chr3A 608375405 608377427 2022 True 322 457 84.1290 1582 2284 2 chr3A.!!$R1 702

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
817 834 0.031111 TCTCATCCCGATCAACCCCT 60.031 55.0 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2347 5732 0.031721 GGCCGATTCGTCCGTCTATT 59.968 55.0 5.2 0.0 0.0 1.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 1.008206 AGAGCTCATTCAGGGAGGAGT 59.992 52.381 17.77 0.00 32.96 3.85
52 53 2.392662 CTCATTCAGGGAGGAGTGCTA 58.607 52.381 0.00 0.00 0.00 3.49
56 57 1.781786 TCAGGGAGGAGTGCTACATC 58.218 55.000 0.00 0.00 0.00 3.06
152 153 1.748403 GGCTGATCAGGCGGTCATA 59.252 57.895 30.74 0.00 44.15 2.15
184 185 3.077359 CAAGTTGGAGAGTTTGGCCTAG 58.923 50.000 3.32 0.00 0.00 3.02
185 186 1.630878 AGTTGGAGAGTTTGGCCTAGG 59.369 52.381 3.67 3.67 0.00 3.02
231 233 0.389948 GTCCTTGACAACGAGGCGAT 60.390 55.000 0.00 0.00 45.02 4.58
264 267 1.140052 ACCATGACGACACAGTGGAAA 59.860 47.619 11.99 0.00 34.13 3.13
375 391 2.773487 CACGATGTTTACCCAGGTTCA 58.227 47.619 0.00 0.00 0.00 3.18
505 521 8.040132 AGAAGCTAGCCTATGATTATGATTGTC 58.960 37.037 12.13 0.00 0.00 3.18
598 615 9.084533 GGTTACAGAGAAGGAGATCTACATATT 57.915 37.037 7.93 0.00 0.00 1.28
708 725 4.038763 CAGTCCGGCCAAAGTATATAGTCA 59.961 45.833 2.24 0.00 0.00 3.41
747 764 4.186077 CTAATCTAGGACTCCCTCACCA 57.814 50.000 0.00 0.00 43.14 4.17
748 765 2.765689 ATCTAGGACTCCCTCACCAG 57.234 55.000 0.00 0.00 43.14 4.00
749 766 0.631753 TCTAGGACTCCCTCACCAGG 59.368 60.000 0.00 0.00 43.14 4.45
757 774 2.673523 CCTCACCAGGGCCTGAAG 59.326 66.667 34.84 25.04 35.89 3.02
758 775 2.045536 CTCACCAGGGCCTGAAGC 60.046 66.667 34.84 0.00 42.60 3.86
759 776 2.530151 TCACCAGGGCCTGAAGCT 60.530 61.111 34.84 10.96 43.05 3.74
760 777 2.360852 CACCAGGGCCTGAAGCTG 60.361 66.667 34.84 19.38 43.05 4.24
761 778 2.856000 ACCAGGGCCTGAAGCTGT 60.856 61.111 34.84 20.08 43.05 4.40
762 779 2.045536 CCAGGGCCTGAAGCTGTC 60.046 66.667 34.84 0.00 43.05 3.51
763 780 2.600729 CCAGGGCCTGAAGCTGTCT 61.601 63.158 34.84 0.00 43.05 3.41
764 781 1.267574 CCAGGGCCTGAAGCTGTCTA 61.268 60.000 34.84 0.00 43.05 2.59
765 782 0.615331 CAGGGCCTGAAGCTGTCTAA 59.385 55.000 29.96 0.00 43.05 2.10
766 783 1.003580 CAGGGCCTGAAGCTGTCTAAA 59.996 52.381 29.96 0.00 43.05 1.85
767 784 1.918957 AGGGCCTGAAGCTGTCTAAAT 59.081 47.619 4.50 0.00 43.05 1.40
768 785 2.092699 AGGGCCTGAAGCTGTCTAAATC 60.093 50.000 4.50 0.00 43.05 2.17
769 786 2.293170 GGCCTGAAGCTGTCTAAATCC 58.707 52.381 0.00 0.00 43.05 3.01
770 787 2.092699 GGCCTGAAGCTGTCTAAATCCT 60.093 50.000 0.00 0.00 43.05 3.24
771 788 3.134804 GGCCTGAAGCTGTCTAAATCCTA 59.865 47.826 0.00 0.00 43.05 2.94
772 789 4.202409 GGCCTGAAGCTGTCTAAATCCTAT 60.202 45.833 0.00 0.00 43.05 2.57
773 790 4.994217 GCCTGAAGCTGTCTAAATCCTATC 59.006 45.833 0.00 0.00 38.99 2.08
774 791 5.221621 GCCTGAAGCTGTCTAAATCCTATCT 60.222 44.000 0.00 0.00 38.99 1.98
775 792 6.687647 GCCTGAAGCTGTCTAAATCCTATCTT 60.688 42.308 0.00 0.00 38.99 2.40
776 793 6.705381 CCTGAAGCTGTCTAAATCCTATCTTG 59.295 42.308 0.00 0.00 0.00 3.02
777 794 7.187824 TGAAGCTGTCTAAATCCTATCTTGT 57.812 36.000 0.00 0.00 0.00 3.16
778 795 7.044181 TGAAGCTGTCTAAATCCTATCTTGTG 58.956 38.462 0.00 0.00 0.00 3.33
779 796 5.363939 AGCTGTCTAAATCCTATCTTGTGC 58.636 41.667 0.00 0.00 0.00 4.57
780 797 4.210120 GCTGTCTAAATCCTATCTTGTGCG 59.790 45.833 0.00 0.00 0.00 5.34
781 798 5.339008 TGTCTAAATCCTATCTTGTGCGT 57.661 39.130 0.00 0.00 0.00 5.24
782 799 5.730550 TGTCTAAATCCTATCTTGTGCGTT 58.269 37.500 0.00 0.00 0.00 4.84
783 800 5.580691 TGTCTAAATCCTATCTTGTGCGTTG 59.419 40.000 0.00 0.00 0.00 4.10
784 801 5.810587 GTCTAAATCCTATCTTGTGCGTTGA 59.189 40.000 0.00 0.00 0.00 3.18
785 802 6.480320 GTCTAAATCCTATCTTGTGCGTTGAT 59.520 38.462 0.00 0.00 0.00 2.57
786 803 5.741388 AAATCCTATCTTGTGCGTTGATC 57.259 39.130 0.00 0.00 0.00 2.92
787 804 3.179443 TCCTATCTTGTGCGTTGATCC 57.821 47.619 0.00 0.00 0.00 3.36
788 805 2.499693 TCCTATCTTGTGCGTTGATCCA 59.500 45.455 0.00 0.00 0.00 3.41
789 806 2.609459 CCTATCTTGTGCGTTGATCCAC 59.391 50.000 0.00 0.00 0.00 4.02
790 807 1.453155 ATCTTGTGCGTTGATCCACC 58.547 50.000 0.00 0.00 0.00 4.61
791 808 0.396435 TCTTGTGCGTTGATCCACCT 59.604 50.000 0.00 0.00 0.00 4.00
792 809 0.798776 CTTGTGCGTTGATCCACCTC 59.201 55.000 0.00 0.00 0.00 3.85
793 810 0.107643 TTGTGCGTTGATCCACCTCA 59.892 50.000 0.00 0.00 0.00 3.86
794 811 0.324614 TGTGCGTTGATCCACCTCAT 59.675 50.000 0.00 0.00 0.00 2.90
795 812 0.729116 GTGCGTTGATCCACCTCATG 59.271 55.000 0.00 0.00 0.00 3.07
796 813 0.324614 TGCGTTGATCCACCTCATGT 59.675 50.000 0.00 0.00 0.00 3.21
797 814 1.009829 GCGTTGATCCACCTCATGTC 58.990 55.000 0.00 0.00 0.00 3.06
798 815 1.406069 GCGTTGATCCACCTCATGTCT 60.406 52.381 0.00 0.00 0.00 3.41
799 816 2.544685 CGTTGATCCACCTCATGTCTC 58.455 52.381 0.00 0.00 0.00 3.36
800 817 2.167281 CGTTGATCCACCTCATGTCTCT 59.833 50.000 0.00 0.00 0.00 3.10
801 818 3.736433 CGTTGATCCACCTCATGTCTCTC 60.736 52.174 0.00 0.00 0.00 3.20
802 819 3.105959 TGATCCACCTCATGTCTCTCA 57.894 47.619 0.00 0.00 0.00 3.27
803 820 3.650948 TGATCCACCTCATGTCTCTCAT 58.349 45.455 0.00 0.00 37.22 2.90
804 821 3.640498 TGATCCACCTCATGTCTCTCATC 59.360 47.826 0.00 0.00 34.09 2.92
805 822 2.392662 TCCACCTCATGTCTCTCATCC 58.607 52.381 0.00 0.00 34.09 3.51
806 823 1.415659 CCACCTCATGTCTCTCATCCC 59.584 57.143 0.00 0.00 34.09 3.85
807 824 1.068281 CACCTCATGTCTCTCATCCCG 59.932 57.143 0.00 0.00 34.09 5.14
808 825 1.063642 ACCTCATGTCTCTCATCCCGA 60.064 52.381 0.00 0.00 34.09 5.14
809 826 2.246469 CCTCATGTCTCTCATCCCGAT 58.754 52.381 0.00 0.00 34.09 4.18
810 827 2.230992 CCTCATGTCTCTCATCCCGATC 59.769 54.545 0.00 0.00 34.09 3.69
811 828 2.889678 CTCATGTCTCTCATCCCGATCA 59.110 50.000 0.00 0.00 34.09 2.92
812 829 3.299503 TCATGTCTCTCATCCCGATCAA 58.700 45.455 0.00 0.00 34.09 2.57
813 830 3.068732 TCATGTCTCTCATCCCGATCAAC 59.931 47.826 0.00 0.00 34.09 3.18
814 831 1.757118 TGTCTCTCATCCCGATCAACC 59.243 52.381 0.00 0.00 0.00 3.77
815 832 1.069358 GTCTCTCATCCCGATCAACCC 59.931 57.143 0.00 0.00 0.00 4.11
816 833 0.394565 CTCTCATCCCGATCAACCCC 59.605 60.000 0.00 0.00 0.00 4.95
817 834 0.031111 TCTCATCCCGATCAACCCCT 60.031 55.000 0.00 0.00 0.00 4.79
818 835 0.394565 CTCATCCCGATCAACCCCTC 59.605 60.000 0.00 0.00 0.00 4.30
819 836 0.031111 TCATCCCGATCAACCCCTCT 60.031 55.000 0.00 0.00 0.00 3.69
820 837 0.394565 CATCCCGATCAACCCCTCTC 59.605 60.000 0.00 0.00 0.00 3.20
821 838 0.031111 ATCCCGATCAACCCCTCTCA 60.031 55.000 0.00 0.00 0.00 3.27
822 839 0.252513 TCCCGATCAACCCCTCTCAA 60.253 55.000 0.00 0.00 0.00 3.02
823 840 0.179000 CCCGATCAACCCCTCTCAAG 59.821 60.000 0.00 0.00 0.00 3.02
824 841 0.462759 CCGATCAACCCCTCTCAAGC 60.463 60.000 0.00 0.00 0.00 4.01
825 842 0.539051 CGATCAACCCCTCTCAAGCT 59.461 55.000 0.00 0.00 0.00 3.74
826 843 1.757118 CGATCAACCCCTCTCAAGCTA 59.243 52.381 0.00 0.00 0.00 3.32
827 844 2.482142 CGATCAACCCCTCTCAAGCTAC 60.482 54.545 0.00 0.00 0.00 3.58
828 845 2.327325 TCAACCCCTCTCAAGCTACT 57.673 50.000 0.00 0.00 0.00 2.57
829 846 3.468071 TCAACCCCTCTCAAGCTACTA 57.532 47.619 0.00 0.00 0.00 1.82
830 847 3.097614 TCAACCCCTCTCAAGCTACTAC 58.902 50.000 0.00 0.00 0.00 2.73
831 848 2.162264 ACCCCTCTCAAGCTACTACC 57.838 55.000 0.00 0.00 0.00 3.18
832 849 1.646977 ACCCCTCTCAAGCTACTACCT 59.353 52.381 0.00 0.00 0.00 3.08
833 850 2.857498 ACCCCTCTCAAGCTACTACCTA 59.143 50.000 0.00 0.00 0.00 3.08
834 851 3.117436 ACCCCTCTCAAGCTACTACCTAG 60.117 52.174 0.00 0.00 0.00 3.02
835 852 3.117436 CCCCTCTCAAGCTACTACCTAGT 60.117 52.174 0.00 0.00 40.24 2.57
836 853 4.538738 CCCTCTCAAGCTACTACCTAGTT 58.461 47.826 0.00 0.00 37.73 2.24
837 854 4.339814 CCCTCTCAAGCTACTACCTAGTTG 59.660 50.000 0.00 0.00 37.73 3.16
843 860 2.537401 GCTACTACCTAGTTGCGTTGG 58.463 52.381 3.63 0.00 42.99 3.77
844 861 2.537401 CTACTACCTAGTTGCGTTGGC 58.463 52.381 0.00 0.00 37.73 4.52
845 862 0.036671 ACTACCTAGTTGCGTTGGCC 60.037 55.000 0.00 0.00 38.85 5.36
846 863 0.249398 CTACCTAGTTGCGTTGGCCT 59.751 55.000 3.32 0.00 38.85 5.19
847 864 0.248289 TACCTAGTTGCGTTGGCCTC 59.752 55.000 3.32 0.00 38.85 4.70
848 865 1.003839 CCTAGTTGCGTTGGCCTCA 60.004 57.895 3.32 0.00 38.85 3.86
849 866 1.298859 CCTAGTTGCGTTGGCCTCAC 61.299 60.000 3.32 0.00 38.85 3.51
850 867 1.626654 CTAGTTGCGTTGGCCTCACG 61.627 60.000 20.13 20.13 38.85 4.35
851 868 2.089887 TAGTTGCGTTGGCCTCACGA 62.090 55.000 26.38 12.24 38.85 4.35
852 869 2.970324 TTGCGTTGGCCTCACGAC 60.970 61.111 26.38 18.61 38.85 4.34
853 870 3.741830 TTGCGTTGGCCTCACGACA 62.742 57.895 26.38 20.43 38.85 4.35
854 871 2.970324 GCGTTGGCCTCACGACAA 60.970 61.111 26.38 0.00 0.00 3.18
855 872 2.954753 GCGTTGGCCTCACGACAAG 61.955 63.158 26.38 3.35 0.00 3.16
856 873 1.594293 CGTTGGCCTCACGACAAGT 60.594 57.895 19.86 0.00 0.00 3.16
857 874 1.557443 CGTTGGCCTCACGACAAGTC 61.557 60.000 19.86 0.00 0.00 3.01
858 875 1.070786 TTGGCCTCACGACAAGTCC 59.929 57.895 3.32 0.00 0.00 3.85
859 876 1.407656 TTGGCCTCACGACAAGTCCT 61.408 55.000 3.32 0.00 0.00 3.85
860 877 1.079750 GGCCTCACGACAAGTCCTC 60.080 63.158 0.00 0.00 0.00 3.71
861 878 1.666011 GCCTCACGACAAGTCCTCA 59.334 57.895 0.00 0.00 0.00 3.86
862 879 0.667792 GCCTCACGACAAGTCCTCAC 60.668 60.000 0.00 0.00 0.00 3.51
863 880 0.673985 CCTCACGACAAGTCCTCACA 59.326 55.000 0.00 0.00 0.00 3.58
864 881 1.603172 CCTCACGACAAGTCCTCACAC 60.603 57.143 0.00 0.00 0.00 3.82
865 882 1.338337 CTCACGACAAGTCCTCACACT 59.662 52.381 0.00 0.00 0.00 3.55
866 883 2.552743 CTCACGACAAGTCCTCACACTA 59.447 50.000 0.00 0.00 0.00 2.74
867 884 2.953648 TCACGACAAGTCCTCACACTAA 59.046 45.455 0.00 0.00 0.00 2.24
868 885 3.572682 TCACGACAAGTCCTCACACTAAT 59.427 43.478 0.00 0.00 0.00 1.73
869 886 3.675225 CACGACAAGTCCTCACACTAATG 59.325 47.826 0.00 0.00 0.00 1.90
870 887 3.572682 ACGACAAGTCCTCACACTAATGA 59.427 43.478 0.00 0.00 0.00 2.57
871 888 3.921021 CGACAAGTCCTCACACTAATGAC 59.079 47.826 0.00 0.00 0.00 3.06
872 889 4.558697 CGACAAGTCCTCACACTAATGACA 60.559 45.833 0.00 0.00 0.00 3.58
873 890 5.482908 GACAAGTCCTCACACTAATGACAT 58.517 41.667 0.00 0.00 0.00 3.06
874 891 5.482908 ACAAGTCCTCACACTAATGACATC 58.517 41.667 0.00 0.00 0.00 3.06
875 892 5.247110 ACAAGTCCTCACACTAATGACATCT 59.753 40.000 0.00 0.00 0.00 2.90
876 893 5.336150 AGTCCTCACACTAATGACATCTG 57.664 43.478 0.00 0.00 0.00 2.90
877 894 3.868077 GTCCTCACACTAATGACATCTGC 59.132 47.826 0.00 0.00 0.00 4.26
878 895 3.118629 TCCTCACACTAATGACATCTGCC 60.119 47.826 0.00 0.00 0.00 4.85
879 896 3.369787 CCTCACACTAATGACATCTGCCA 60.370 47.826 0.00 0.00 0.00 4.92
880 897 4.449131 CTCACACTAATGACATCTGCCAT 58.551 43.478 0.00 0.00 0.00 4.40
881 898 4.193865 TCACACTAATGACATCTGCCATG 58.806 43.478 0.00 0.00 0.00 3.66
882 899 4.080975 TCACACTAATGACATCTGCCATGA 60.081 41.667 0.00 0.00 0.00 3.07
883 900 4.034858 CACACTAATGACATCTGCCATGAC 59.965 45.833 0.00 0.00 0.00 3.06
884 901 4.193865 CACTAATGACATCTGCCATGACA 58.806 43.478 0.00 0.74 0.00 3.58
885 902 4.637091 CACTAATGACATCTGCCATGACAA 59.363 41.667 0.00 0.00 0.00 3.18
886 903 5.124297 CACTAATGACATCTGCCATGACAAA 59.876 40.000 0.00 0.00 0.00 2.83
887 904 5.889853 ACTAATGACATCTGCCATGACAAAT 59.110 36.000 0.00 0.00 0.00 2.32
888 905 4.913335 ATGACATCTGCCATGACAAATC 57.087 40.909 0.00 0.00 0.00 2.17
889 906 3.018856 TGACATCTGCCATGACAAATCC 58.981 45.455 0.00 0.00 0.00 3.01
890 907 3.018856 GACATCTGCCATGACAAATCCA 58.981 45.455 0.00 0.00 0.00 3.41
891 908 2.756760 ACATCTGCCATGACAAATCCAC 59.243 45.455 0.00 0.00 0.00 4.02
892 909 1.452110 TCTGCCATGACAAATCCACG 58.548 50.000 0.00 0.00 0.00 4.94
893 910 0.452987 CTGCCATGACAAATCCACGG 59.547 55.000 0.00 0.00 0.00 4.94
894 911 0.251121 TGCCATGACAAATCCACGGT 60.251 50.000 0.00 0.00 0.00 4.83
900 917 4.640201 CCATGACAAATCCACGGTAGAATT 59.360 41.667 0.00 0.00 0.00 2.17
950 969 6.017109 ACGCTCTCAGTCAATTTTGTTAATGT 60.017 34.615 0.00 0.00 0.00 2.71
958 977 6.710744 AGTCAATTTTGTTAATGTCTCCTCGT 59.289 34.615 0.00 0.00 0.00 4.18
968 987 0.456995 GTCTCCTCGTCGAAGGCTTG 60.457 60.000 3.46 0.00 36.29 4.01
988 1007 1.680207 GCATGAAAAGAGGAGGATGGC 59.320 52.381 0.00 0.00 0.00 4.40
1054 1073 0.178973 TGACCACGACCTTCTCAGGA 60.179 55.000 0.00 0.00 44.19 3.86
1100 1119 4.466370 AGATGACAAAGGTAGGTTCATCGA 59.534 41.667 0.00 0.00 37.95 3.59
1131 1150 2.371841 TGGTAAGATTGACTGGTGTGCT 59.628 45.455 0.00 0.00 0.00 4.40
1143 1162 2.555325 CTGGTGTGCTGATGTGTTGATT 59.445 45.455 0.00 0.00 0.00 2.57
1167 1186 5.409214 TGCTGAAGCTTTGGCATTAAAATTC 59.591 36.000 18.82 0.00 42.66 2.17
1169 1188 5.537188 TGAAGCTTTGGCATTAAAATTCGT 58.463 33.333 0.00 0.00 41.70 3.85
1247 1266 1.339610 GGAGGTGATCGAGACCATGAG 59.660 57.143 16.60 0.00 35.76 2.90
1248 1267 2.028130 GAGGTGATCGAGACCATGAGT 58.972 52.381 16.60 0.00 35.76 3.41
1265 1284 1.473278 GAGTGAAGGAGGACGATCGTT 59.527 52.381 23.63 7.27 0.00 3.85
1280 1299 4.982701 GTTGGGGGCAGCAGCTGT 62.983 66.667 23.60 0.00 41.70 4.40
1318 1337 6.039616 TGTTTTCACTTAGCTTGCGATTTTT 58.960 32.000 0.00 0.00 0.00 1.94
1433 1452 4.321899 GCTTGAGGAACCACATAATGCAAA 60.322 41.667 0.00 0.00 0.00 3.68
1438 1457 6.435591 TGAGGAACCACATAATGCAAATGTAA 59.564 34.615 15.40 0.00 35.82 2.41
1446 1465 7.223193 CCACATAATGCAAATGTAACAATCCTG 59.777 37.037 15.40 3.43 35.82 3.86
1452 1471 6.757237 TGCAAATGTAACAATCCTGACAAAT 58.243 32.000 0.00 0.00 0.00 2.32
1496 1515 6.877611 TGAATAAAGCTCGAACCTTCTTTT 57.122 33.333 0.00 0.00 31.92 2.27
1516 1535 4.058797 AAAAAGGACGCCGACAGG 57.941 55.556 0.00 0.00 41.62 4.00
1524 1543 4.043168 CGCCGACAGGTGTTTCTT 57.957 55.556 0.00 0.00 42.91 2.52
1526 1545 1.504359 CGCCGACAGGTGTTTCTTAA 58.496 50.000 0.00 0.00 42.91 1.85
1527 1546 1.459592 CGCCGACAGGTGTTTCTTAAG 59.540 52.381 0.00 0.00 42.91 1.85
1529 1548 3.656559 GCCGACAGGTGTTTCTTAAGTA 58.343 45.455 1.63 0.00 40.50 2.24
1530 1549 4.060205 GCCGACAGGTGTTTCTTAAGTAA 58.940 43.478 1.63 0.00 40.50 2.24
1531 1550 4.084171 GCCGACAGGTGTTTCTTAAGTAAC 60.084 45.833 15.79 15.79 40.50 2.50
1532 1551 4.450080 CCGACAGGTGTTTCTTAAGTAACC 59.550 45.833 18.79 13.74 0.00 2.85
1533 1552 4.450080 CGACAGGTGTTTCTTAAGTAACCC 59.550 45.833 18.79 17.93 0.00 4.11
1535 1554 5.618236 ACAGGTGTTTCTTAAGTAACCCTC 58.382 41.667 21.39 13.32 30.14 4.30
1536 1555 5.001874 CAGGTGTTTCTTAAGTAACCCTCC 58.998 45.833 21.39 18.60 30.14 4.30
1537 1556 4.042560 AGGTGTTTCTTAAGTAACCCTCCC 59.957 45.833 18.79 13.78 28.09 4.30
1538 1557 4.202493 GGTGTTTCTTAAGTAACCCTCCCA 60.202 45.833 18.79 0.73 0.00 4.37
1539 1558 5.001874 GTGTTTCTTAAGTAACCCTCCCAG 58.998 45.833 18.79 0.00 0.00 4.45
1540 1559 4.042435 TGTTTCTTAAGTAACCCTCCCAGG 59.958 45.833 18.79 0.00 34.30 4.45
1541 1560 3.572661 TCTTAAGTAACCCTCCCAGGT 57.427 47.619 1.63 0.00 44.00 4.00
1542 1561 3.178865 TCTTAAGTAACCCTCCCAGGTG 58.821 50.000 1.63 0.00 40.05 4.00
1543 1562 1.282382 TAAGTAACCCTCCCAGGTGC 58.718 55.000 0.00 0.00 40.05 5.01
1544 1563 1.498176 AAGTAACCCTCCCAGGTGCC 61.498 60.000 0.00 0.00 40.05 5.01
1545 1564 1.923909 GTAACCCTCCCAGGTGCCT 60.924 63.158 0.00 0.00 40.05 4.75
1546 1565 1.615424 TAACCCTCCCAGGTGCCTC 60.615 63.158 0.00 0.00 40.05 4.70
1550 1569 3.322466 CTCCCAGGTGCCTCGGTT 61.322 66.667 1.91 0.00 0.00 4.44
1551 1570 2.852075 TCCCAGGTGCCTCGGTTT 60.852 61.111 1.91 0.00 0.00 3.27
1554 1573 1.228124 CCAGGTGCCTCGGTTTCAA 60.228 57.895 0.00 0.00 0.00 2.69
1555 1574 1.515521 CCAGGTGCCTCGGTTTCAAC 61.516 60.000 0.00 0.00 0.00 3.18
1556 1575 1.597027 AGGTGCCTCGGTTTCAACG 60.597 57.895 0.00 0.00 0.00 4.10
1557 1576 2.251371 GTGCCTCGGTTTCAACGC 59.749 61.111 0.00 0.00 0.00 4.84
1558 1577 2.110213 TGCCTCGGTTTCAACGCT 59.890 55.556 0.00 0.00 0.00 5.07
1559 1578 2.250939 TGCCTCGGTTTCAACGCTG 61.251 57.895 0.00 0.00 0.00 5.18
1560 1579 2.556287 CCTCGGTTTCAACGCTGC 59.444 61.111 0.00 0.00 0.00 5.25
1561 1580 2.250939 CCTCGGTTTCAACGCTGCA 61.251 57.895 0.00 0.00 0.00 4.41
1562 1581 1.082756 CTCGGTTTCAACGCTGCAC 60.083 57.895 0.00 0.00 0.00 4.57
1573 1592 2.257371 GCTGCACGTAGTCGGACA 59.743 61.111 11.27 0.00 41.61 4.02
1574 1593 1.801913 GCTGCACGTAGTCGGACAG 60.802 63.158 11.27 3.97 41.61 3.51
1578 1597 1.154016 CACGTAGTCGGACAGCCAG 60.154 63.158 11.27 0.00 41.61 4.85
1579 1598 2.341101 ACGTAGTCGGACAGCCAGG 61.341 63.158 11.27 1.27 29.74 4.45
1580 1599 2.893398 GTAGTCGGACAGCCAGGG 59.107 66.667 11.27 0.00 0.00 4.45
1629 1956 0.881796 GGCAAAACTCTTCCTTCCCG 59.118 55.000 0.00 0.00 0.00 5.14
1630 1957 0.241213 GCAAAACTCTTCCTTCCCGC 59.759 55.000 0.00 0.00 0.00 6.13
1631 1958 0.881796 CAAAACTCTTCCTTCCCGCC 59.118 55.000 0.00 0.00 0.00 6.13
1646 1973 2.250939 CGCCGAAAAGCTGTGGTGA 61.251 57.895 0.00 0.00 33.86 4.02
1664 2004 4.040339 TGGTGACATCAGTAGCTCTTGAAA 59.960 41.667 4.40 0.00 33.40 2.69
1671 2011 6.318144 ACATCAGTAGCTCTTGAAATGAATGG 59.682 38.462 4.40 0.00 0.00 3.16
1675 2015 3.159472 AGCTCTTGAAATGAATGGTGCA 58.841 40.909 0.00 0.00 0.00 4.57
1690 2030 2.045926 GCACCGGGAGTCAATGCT 60.046 61.111 6.32 0.00 33.44 3.79
1724 2064 1.999024 CTTGTGTGGTTTTGTGCAACC 59.001 47.619 0.00 0.00 45.88 3.77
1808 2148 7.757097 TTTTTGAGTAGATAGATCGCACTTC 57.243 36.000 2.59 0.00 30.53 3.01
1809 2149 5.440234 TTGAGTAGATAGATCGCACTTCC 57.560 43.478 2.59 0.00 30.53 3.46
1810 2150 3.821600 TGAGTAGATAGATCGCACTTCCC 59.178 47.826 2.59 0.00 30.53 3.97
1814 4344 2.968574 AGATAGATCGCACTTCCCATGT 59.031 45.455 0.00 0.00 0.00 3.21
1826 4356 4.876107 CACTTCCCATGTATGGTTCAGTAC 59.124 45.833 9.87 0.00 46.65 2.73
1827 4357 4.534500 ACTTCCCATGTATGGTTCAGTACA 59.466 41.667 9.87 0.00 46.65 2.90
1834 5159 7.386059 CCATGTATGGTTCAGTACATATAGCA 58.614 38.462 2.66 0.00 43.05 3.49
1841 5166 8.360325 TGGTTCAGTACATATAGCATAAAACG 57.640 34.615 0.00 0.00 0.00 3.60
1844 5169 8.485591 GTTCAGTACATATAGCATAAAACGGAC 58.514 37.037 0.00 0.00 0.00 4.79
1872 5197 5.121768 CACATCGTTTTTATCTTCCCGAAGT 59.878 40.000 4.45 0.00 39.38 3.01
1876 5201 6.222389 TCGTTTTTATCTTCCCGAAGTAACA 58.778 36.000 4.45 0.00 39.38 2.41
1879 5204 7.532884 CGTTTTTATCTTCCCGAAGTAACAAAG 59.467 37.037 4.45 2.60 39.38 2.77
1882 5207 2.707257 TCTTCCCGAAGTAACAAAGGGT 59.293 45.455 4.45 0.00 42.57 4.34
1904 5286 8.567948 AGGGTAAATAAATTCATGCACTATTCG 58.432 33.333 0.00 0.00 0.00 3.34
1908 5290 4.818534 AAATTCATGCACTATTCGCGAT 57.181 36.364 10.88 2.60 0.00 4.58
1919 5301 5.634020 GCACTATTCGCGATAAGGAATTACT 59.366 40.000 10.88 0.00 34.82 2.24
1975 5360 4.397103 CCATTCCGCGGTATATACTACTCA 59.603 45.833 27.15 0.00 0.00 3.41
1984 5369 8.449397 CGCGGTATATACTACTCATATATTCCC 58.551 40.741 12.54 0.00 32.65 3.97
2000 5385 0.542467 TCCCATGGCAGCACAAACAT 60.542 50.000 6.09 0.00 0.00 2.71
2006 5391 2.512705 TGGCAGCACAAACATCACATA 58.487 42.857 0.00 0.00 0.00 2.29
2016 5401 4.142622 ACAAACATCACATATTCTGCGTGG 60.143 41.667 0.00 0.00 0.00 4.94
2033 5418 5.064558 TGCGTGGTAATTAAGTCTTGGAAA 58.935 37.500 0.00 0.00 0.00 3.13
2037 5422 6.348950 CGTGGTAATTAAGTCTTGGAAATGCA 60.349 38.462 0.00 0.00 0.00 3.96
2048 5433 4.226846 TCTTGGAAATGCAAGAGAGAGGAT 59.773 41.667 12.58 0.00 33.07 3.24
2062 5447 5.188751 AGAGAGAGGATTTTGACTTGTAGGG 59.811 44.000 0.00 0.00 0.00 3.53
2063 5448 4.226168 AGAGAGGATTTTGACTTGTAGGGG 59.774 45.833 0.00 0.00 0.00 4.79
2073 5458 8.713708 TTTTGACTTGTAGGGGATTTAATTCA 57.286 30.769 0.20 0.00 0.00 2.57
2074 5459 8.713708 TTTGACTTGTAGGGGATTTAATTCAA 57.286 30.769 0.20 0.00 0.00 2.69
2077 5462 7.393234 TGACTTGTAGGGGATTTAATTCAACTG 59.607 37.037 0.20 0.00 0.00 3.16
2089 5474 7.847711 TTTAATTCAACTGAATCCCCTTCAA 57.152 32.000 5.44 0.00 43.41 2.69
2090 5475 7.847711 TTAATTCAACTGAATCCCCTTCAAA 57.152 32.000 5.44 0.00 43.41 2.69
2091 5476 5.728637 ATTCAACTGAATCCCCTTCAAAC 57.271 39.130 0.00 0.00 43.20 2.93
2093 5478 2.562738 CAACTGAATCCCCTTCAAACCC 59.437 50.000 0.00 0.00 43.20 4.11
2095 5480 1.077005 CTGAATCCCCTTCAAACCCCA 59.923 52.381 0.00 0.00 43.20 4.96
2096 5481 1.721691 TGAATCCCCTTCAAACCCCAT 59.278 47.619 0.00 0.00 40.92 4.00
2097 5482 2.292192 TGAATCCCCTTCAAACCCCATC 60.292 50.000 0.00 0.00 40.92 3.51
2098 5483 0.258774 ATCCCCTTCAAACCCCATCG 59.741 55.000 0.00 0.00 0.00 3.84
2099 5484 0.842905 TCCCCTTCAAACCCCATCGA 60.843 55.000 0.00 0.00 0.00 3.59
2100 5485 0.039035 CCCCTTCAAACCCCATCGAA 59.961 55.000 0.00 0.00 0.00 3.71
2101 5486 1.341976 CCCCTTCAAACCCCATCGAAT 60.342 52.381 0.00 0.00 0.00 3.34
2102 5487 2.024414 CCCTTCAAACCCCATCGAATC 58.976 52.381 0.00 0.00 0.00 2.52
2103 5488 2.024414 CCTTCAAACCCCATCGAATCC 58.976 52.381 0.00 0.00 0.00 3.01
2104 5489 2.357154 CCTTCAAACCCCATCGAATCCT 60.357 50.000 0.00 0.00 0.00 3.24
2110 5495 1.988107 ACCCCATCGAATCCTATGCAT 59.012 47.619 3.79 3.79 0.00 3.96
2113 5498 2.274437 CCATCGAATCCTATGCATCCG 58.726 52.381 0.19 0.00 0.00 4.18
2119 5504 3.185188 CGAATCCTATGCATCCGAACAAG 59.815 47.826 0.19 0.00 0.00 3.16
2122 5507 1.667236 CTATGCATCCGAACAAGCCA 58.333 50.000 0.19 0.00 0.00 4.75
2124 5509 0.608856 ATGCATCCGAACAAGCCACA 60.609 50.000 0.00 0.00 0.00 4.17
2129 5514 0.817634 TCCGAACAAGCCACAAGGTG 60.818 55.000 0.00 0.00 37.19 4.00
2140 5525 2.912025 CAAGGTGGCGCTGGGTTT 60.912 61.111 7.64 0.00 0.00 3.27
2152 5537 2.271173 GGGTTTAGGGGAGTGGCG 59.729 66.667 0.00 0.00 0.00 5.69
2170 5555 1.810532 GTCGATGAAGAGCGGGTCT 59.189 57.895 3.41 3.41 36.94 3.85
2175 5560 0.674895 ATGAAGAGCGGGTCTTGCAC 60.675 55.000 25.54 12.66 46.21 4.57
2202 5587 1.183030 ACCTCCATCACGACAACCGA 61.183 55.000 0.00 0.00 41.76 4.69
2203 5588 0.037697 CCTCCATCACGACAACCGAA 60.038 55.000 0.00 0.00 41.76 4.30
2204 5589 1.405526 CCTCCATCACGACAACCGAAT 60.406 52.381 0.00 0.00 41.76 3.34
2205 5590 1.660607 CTCCATCACGACAACCGAATG 59.339 52.381 0.00 0.00 41.76 2.67
2206 5591 0.096976 CCATCACGACAACCGAATGC 59.903 55.000 0.00 0.00 41.76 3.56
2207 5592 0.795698 CATCACGACAACCGAATGCA 59.204 50.000 0.00 0.00 41.76 3.96
2208 5593 1.398041 CATCACGACAACCGAATGCAT 59.602 47.619 0.00 0.00 41.76 3.96
2210 5595 0.795698 CACGACAACCGAATGCATCA 59.204 50.000 0.00 0.00 41.76 3.07
2211 5596 0.796312 ACGACAACCGAATGCATCAC 59.204 50.000 0.00 0.00 41.76 3.06
2212 5597 0.096976 CGACAACCGAATGCATCACC 59.903 55.000 0.00 0.00 41.76 4.02
2213 5598 1.453155 GACAACCGAATGCATCACCT 58.547 50.000 0.00 0.00 0.00 4.00
2214 5599 1.812571 GACAACCGAATGCATCACCTT 59.187 47.619 0.00 0.00 0.00 3.50
2215 5600 1.812571 ACAACCGAATGCATCACCTTC 59.187 47.619 0.00 0.00 0.00 3.46
2216 5601 1.811965 CAACCGAATGCATCACCTTCA 59.188 47.619 0.00 0.00 0.00 3.02
2217 5602 1.453155 ACCGAATGCATCACCTTCAC 58.547 50.000 0.00 0.00 0.00 3.18
2219 5604 1.399440 CCGAATGCATCACCTTCACAG 59.601 52.381 0.00 0.00 0.00 3.66
2220 5605 2.349590 CGAATGCATCACCTTCACAGA 58.650 47.619 0.00 0.00 0.00 3.41
2221 5606 2.350804 CGAATGCATCACCTTCACAGAG 59.649 50.000 0.00 0.00 0.00 3.35
2284 5669 4.933505 TGATCAGACAATCAGCTCTAGG 57.066 45.455 0.00 0.00 32.03 3.02
2285 5670 3.640498 TGATCAGACAATCAGCTCTAGGG 59.360 47.826 0.00 0.00 32.03 3.53
2286 5671 2.392662 TCAGACAATCAGCTCTAGGGG 58.607 52.381 0.00 0.00 0.00 4.79
2287 5672 2.114616 CAGACAATCAGCTCTAGGGGT 58.885 52.381 0.00 0.00 0.00 4.95
2288 5673 2.503356 CAGACAATCAGCTCTAGGGGTT 59.497 50.000 0.00 0.00 0.00 4.11
2289 5674 2.503356 AGACAATCAGCTCTAGGGGTTG 59.497 50.000 0.00 0.00 0.00 3.77
2290 5675 2.237392 GACAATCAGCTCTAGGGGTTGT 59.763 50.000 0.00 0.00 0.00 3.32
2291 5676 2.644798 ACAATCAGCTCTAGGGGTTGTT 59.355 45.455 0.00 0.00 0.00 2.83
2292 5677 3.074538 ACAATCAGCTCTAGGGGTTGTTT 59.925 43.478 0.00 0.00 0.00 2.83
2293 5678 2.859165 TCAGCTCTAGGGGTTGTTTG 57.141 50.000 0.00 0.00 0.00 2.93
2294 5679 1.351017 TCAGCTCTAGGGGTTGTTTGG 59.649 52.381 0.00 0.00 0.00 3.28
2295 5680 1.073923 CAGCTCTAGGGGTTGTTTGGT 59.926 52.381 0.00 0.00 0.00 3.67
2296 5681 1.780919 AGCTCTAGGGGTTGTTTGGTT 59.219 47.619 0.00 0.00 0.00 3.67
2297 5682 2.177016 AGCTCTAGGGGTTGTTTGGTTT 59.823 45.455 0.00 0.00 0.00 3.27
2298 5683 2.557056 GCTCTAGGGGTTGTTTGGTTTC 59.443 50.000 0.00 0.00 0.00 2.78
2299 5684 3.750922 GCTCTAGGGGTTGTTTGGTTTCT 60.751 47.826 0.00 0.00 0.00 2.52
2300 5685 3.821033 CTCTAGGGGTTGTTTGGTTTCTG 59.179 47.826 0.00 0.00 0.00 3.02
2301 5686 1.119684 AGGGGTTGTTTGGTTTCTGC 58.880 50.000 0.00 0.00 0.00 4.26
2302 5687 0.105964 GGGGTTGTTTGGTTTCTGCC 59.894 55.000 0.00 0.00 0.00 4.85
2303 5688 0.249280 GGGTTGTTTGGTTTCTGCCG 60.249 55.000 0.00 0.00 0.00 5.69
2304 5689 0.874175 GGTTGTTTGGTTTCTGCCGC 60.874 55.000 0.00 0.00 0.00 6.53
2305 5690 0.102300 GTTGTTTGGTTTCTGCCGCT 59.898 50.000 0.00 0.00 0.00 5.52
2306 5691 0.102120 TTGTTTGGTTTCTGCCGCTG 59.898 50.000 0.00 0.00 0.00 5.18
2307 5692 1.661509 GTTTGGTTTCTGCCGCTGC 60.662 57.895 0.00 0.00 38.26 5.25
2308 5693 2.855514 TTTGGTTTCTGCCGCTGCC 61.856 57.895 0.00 0.00 36.33 4.85
2320 5705 4.733542 GCTGCCCGCCCTACCAAA 62.734 66.667 0.00 0.00 0.00 3.28
2321 5706 2.275418 CTGCCCGCCCTACCAAAT 59.725 61.111 0.00 0.00 0.00 2.32
2322 5707 1.823899 CTGCCCGCCCTACCAAATC 60.824 63.158 0.00 0.00 0.00 2.17
2323 5708 2.274104 GCCCGCCCTACCAAATCA 59.726 61.111 0.00 0.00 0.00 2.57
2324 5709 1.152756 GCCCGCCCTACCAAATCAT 60.153 57.895 0.00 0.00 0.00 2.45
2325 5710 1.455383 GCCCGCCCTACCAAATCATG 61.455 60.000 0.00 0.00 0.00 3.07
2333 5718 3.140141 CCAAATCATGGGCGCGGT 61.140 61.111 8.83 0.00 46.27 5.68
2334 5719 2.709883 CCAAATCATGGGCGCGGTT 61.710 57.895 8.83 0.00 46.27 4.44
2335 5720 1.516821 CAAATCATGGGCGCGGTTG 60.517 57.895 8.83 0.00 0.00 3.77
2336 5721 2.709883 AAATCATGGGCGCGGTTGG 61.710 57.895 8.83 0.00 0.00 3.77
2337 5722 3.936772 AATCATGGGCGCGGTTGGT 62.937 57.895 8.83 0.00 0.00 3.67
2365 5750 1.849097 AAATAGACGGACGAATCGGC 58.151 50.000 7.80 2.86 35.58 5.54
2380 5765 4.778143 GGCCACCCGCAGTTCGAT 62.778 66.667 0.00 0.00 41.67 3.59
2381 5766 3.195698 GCCACCCGCAGTTCGATC 61.196 66.667 0.00 0.00 41.67 3.69
2382 5767 2.264480 CCACCCGCAGTTCGATCA 59.736 61.111 0.00 0.00 41.67 2.92
2383 5768 1.375396 CCACCCGCAGTTCGATCAA 60.375 57.895 0.00 0.00 41.67 2.57
2384 5769 1.635663 CCACCCGCAGTTCGATCAAC 61.636 60.000 0.00 0.00 41.67 3.18
2385 5770 0.948623 CACCCGCAGTTCGATCAACA 60.949 55.000 9.64 0.00 41.67 3.33
2386 5771 0.250124 ACCCGCAGTTCGATCAACAA 60.250 50.000 9.64 0.00 41.67 2.83
2387 5772 1.086696 CCCGCAGTTCGATCAACAAT 58.913 50.000 9.64 0.00 41.67 2.71
2388 5773 1.468520 CCCGCAGTTCGATCAACAATT 59.531 47.619 9.64 0.00 41.67 2.32
2389 5774 2.095263 CCCGCAGTTCGATCAACAATTT 60.095 45.455 9.64 0.00 41.67 1.82
2390 5775 2.910482 CCGCAGTTCGATCAACAATTTG 59.090 45.455 9.64 0.00 41.67 2.32
2391 5776 2.910482 CGCAGTTCGATCAACAATTTGG 59.090 45.455 0.78 0.00 41.67 3.28
2392 5777 2.663119 GCAGTTCGATCAACAATTTGGC 59.337 45.455 0.78 0.00 37.48 4.52
2393 5778 3.612479 GCAGTTCGATCAACAATTTGGCT 60.612 43.478 0.78 0.00 37.48 4.75
2394 5779 4.161333 CAGTTCGATCAACAATTTGGCTC 58.839 43.478 0.78 0.00 37.48 4.70
2395 5780 3.820467 AGTTCGATCAACAATTTGGCTCA 59.180 39.130 0.78 0.00 37.48 4.26
2396 5781 4.278170 AGTTCGATCAACAATTTGGCTCAA 59.722 37.500 0.78 0.00 37.48 3.02
2397 5782 4.844998 TCGATCAACAATTTGGCTCAAA 57.155 36.364 0.78 3.33 37.75 2.69
2398 5783 5.193663 TCGATCAACAATTTGGCTCAAAA 57.806 34.783 0.78 0.00 36.90 2.44
2399 5784 5.221880 TCGATCAACAATTTGGCTCAAAAG 58.778 37.500 0.78 4.10 36.90 2.27
2400 5785 5.009510 TCGATCAACAATTTGGCTCAAAAGA 59.990 36.000 0.78 0.90 36.90 2.52
2401 5786 5.691305 CGATCAACAATTTGGCTCAAAAGAA 59.309 36.000 0.78 0.00 36.90 2.52
2402 5787 6.129009 CGATCAACAATTTGGCTCAAAAGAAG 60.129 38.462 0.78 0.00 36.90 2.85
2403 5788 6.219417 TCAACAATTTGGCTCAAAAGAAGA 57.781 33.333 0.78 3.30 36.90 2.87
2404 5789 6.275335 TCAACAATTTGGCTCAAAAGAAGAG 58.725 36.000 0.78 0.00 36.90 2.85
2405 5790 5.205759 ACAATTTGGCTCAAAAGAAGAGG 57.794 39.130 0.78 0.00 36.90 3.69
2406 5791 4.039609 ACAATTTGGCTCAAAAGAAGAGGG 59.960 41.667 0.78 0.00 36.90 4.30
2407 5792 1.620822 TTGGCTCAAAAGAAGAGGGC 58.379 50.000 0.00 0.00 33.72 5.19
2408 5793 0.606401 TGGCTCAAAAGAAGAGGGCG 60.606 55.000 0.00 0.00 33.72 6.13
2409 5794 1.308783 GGCTCAAAAGAAGAGGGCGG 61.309 60.000 0.00 0.00 33.72 6.13
2410 5795 0.321653 GCTCAAAAGAAGAGGGCGGA 60.322 55.000 0.00 0.00 33.72 5.54
2411 5796 1.731720 CTCAAAAGAAGAGGGCGGAG 58.268 55.000 0.00 0.00 0.00 4.63
2437 5822 1.549203 CAGGCTAGCCCAACAACATT 58.451 50.000 30.42 5.22 36.58 2.71
2438 5823 1.895131 CAGGCTAGCCCAACAACATTT 59.105 47.619 30.42 4.39 36.58 2.32
2441 5826 2.612721 GGCTAGCCCAACAACATTTTGG 60.613 50.000 24.19 0.00 42.90 3.28
2442 5827 2.037121 GCTAGCCCAACAACATTTTGGT 59.963 45.455 2.29 0.00 41.87 3.67
2458 5843 0.605319 TGGTGTCGATCCAAACAGCC 60.605 55.000 9.36 8.60 41.89 4.85
2459 5844 0.605319 GGTGTCGATCCAAACAGCCA 60.605 55.000 7.98 0.00 37.81 4.75
2460 5845 0.798776 GTGTCGATCCAAACAGCCAG 59.201 55.000 0.00 0.00 0.00 4.85
2461 5846 0.955428 TGTCGATCCAAACAGCCAGC 60.955 55.000 0.00 0.00 0.00 4.85
2462 5847 1.377202 TCGATCCAAACAGCCAGCC 60.377 57.895 0.00 0.00 0.00 4.85
2465 5850 3.944250 ATCCAAACAGCCAGCCCGG 62.944 63.158 0.00 0.00 38.11 5.73
2474 5859 3.399181 CCAGCCCGGCCTAGACAA 61.399 66.667 5.55 0.00 0.00 3.18
2475 5860 2.125106 CAGCCCGGCCTAGACAAC 60.125 66.667 5.55 0.00 0.00 3.32
2476 5861 2.284699 AGCCCGGCCTAGACAACT 60.285 61.111 5.55 0.00 0.00 3.16
2477 5862 1.001248 AGCCCGGCCTAGACAACTA 59.999 57.895 5.55 0.00 0.00 2.24
2478 5863 1.143401 GCCCGGCCTAGACAACTAC 59.857 63.158 0.00 0.00 0.00 2.73
2479 5864 1.821258 CCCGGCCTAGACAACTACC 59.179 63.158 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 2.319844 ACAGATGGATCCGATGTAGCA 58.680 47.619 13.06 0.00 0.00 3.49
52 53 1.069204 CCGAACAGATGGATCCGATGT 59.931 52.381 7.39 8.81 0.00 3.06
56 57 0.461870 TTGCCGAACAGATGGATCCG 60.462 55.000 7.39 0.00 0.00 4.18
137 138 1.107945 TCGTTATGACCGCCTGATCA 58.892 50.000 0.00 0.00 0.00 2.92
152 153 2.551912 CCAACTTGGCGGCTTCGTT 61.552 57.895 11.43 7.87 36.07 3.85
188 189 2.958739 ACCTCTGGGGGAGCCCTA 60.959 66.667 5.38 0.00 44.66 3.53
231 233 3.262151 TCGTCATGGTAAGGTTTGATGGA 59.738 43.478 0.00 0.00 0.00 3.41
264 267 4.142534 CGACATTGGTGCTTTCATTGAGAT 60.143 41.667 0.00 0.00 0.00 2.75
354 370 1.467342 GAACCTGGGTAAACATCGTGC 59.533 52.381 0.00 0.00 0.00 5.34
551 568 2.458620 GACTCTGTGTAACCCTAGCCT 58.541 52.381 0.00 0.00 34.36 4.58
747 764 1.362224 TTTAGACAGCTTCAGGCCCT 58.638 50.000 0.00 0.00 43.05 5.19
748 765 2.293170 GATTTAGACAGCTTCAGGCCC 58.707 52.381 0.00 0.00 43.05 5.80
749 766 2.092699 AGGATTTAGACAGCTTCAGGCC 60.093 50.000 0.00 0.00 43.05 5.19
750 767 3.274095 AGGATTTAGACAGCTTCAGGC 57.726 47.619 0.00 0.00 42.19 4.85
751 768 6.418057 AGATAGGATTTAGACAGCTTCAGG 57.582 41.667 0.00 0.00 0.00 3.86
752 769 7.224362 CACAAGATAGGATTTAGACAGCTTCAG 59.776 40.741 0.00 0.00 0.00 3.02
753 770 7.044181 CACAAGATAGGATTTAGACAGCTTCA 58.956 38.462 0.00 0.00 0.00 3.02
754 771 6.018343 GCACAAGATAGGATTTAGACAGCTTC 60.018 42.308 0.00 0.00 0.00 3.86
755 772 5.819901 GCACAAGATAGGATTTAGACAGCTT 59.180 40.000 0.00 0.00 0.00 3.74
756 773 5.363939 GCACAAGATAGGATTTAGACAGCT 58.636 41.667 0.00 0.00 0.00 4.24
757 774 4.210120 CGCACAAGATAGGATTTAGACAGC 59.790 45.833 0.00 0.00 0.00 4.40
758 775 5.352284 ACGCACAAGATAGGATTTAGACAG 58.648 41.667 0.00 0.00 0.00 3.51
759 776 5.339008 ACGCACAAGATAGGATTTAGACA 57.661 39.130 0.00 0.00 0.00 3.41
760 777 5.810587 TCAACGCACAAGATAGGATTTAGAC 59.189 40.000 0.00 0.00 0.00 2.59
761 778 5.972935 TCAACGCACAAGATAGGATTTAGA 58.027 37.500 0.00 0.00 0.00 2.10
762 779 6.073548 GGATCAACGCACAAGATAGGATTTAG 60.074 42.308 0.00 0.00 0.00 1.85
763 780 5.758296 GGATCAACGCACAAGATAGGATTTA 59.242 40.000 0.00 0.00 0.00 1.40
764 781 4.576463 GGATCAACGCACAAGATAGGATTT 59.424 41.667 0.00 0.00 0.00 2.17
765 782 4.130118 GGATCAACGCACAAGATAGGATT 58.870 43.478 0.00 0.00 0.00 3.01
766 783 3.134623 TGGATCAACGCACAAGATAGGAT 59.865 43.478 0.00 0.00 0.00 3.24
767 784 2.499693 TGGATCAACGCACAAGATAGGA 59.500 45.455 0.00 0.00 0.00 2.94
768 785 2.609459 GTGGATCAACGCACAAGATAGG 59.391 50.000 0.00 0.00 0.00 2.57
769 786 2.609459 GGTGGATCAACGCACAAGATAG 59.391 50.000 0.00 0.00 0.00 2.08
770 787 2.236146 AGGTGGATCAACGCACAAGATA 59.764 45.455 0.00 0.00 0.00 1.98
771 788 1.003580 AGGTGGATCAACGCACAAGAT 59.996 47.619 0.00 0.00 0.00 2.40
772 789 0.396435 AGGTGGATCAACGCACAAGA 59.604 50.000 0.00 0.00 0.00 3.02
773 790 0.798776 GAGGTGGATCAACGCACAAG 59.201 55.000 0.00 0.00 0.00 3.16
774 791 0.107643 TGAGGTGGATCAACGCACAA 59.892 50.000 0.00 0.00 0.00 3.33
775 792 0.324614 ATGAGGTGGATCAACGCACA 59.675 50.000 0.00 0.00 33.14 4.57
776 793 0.729116 CATGAGGTGGATCAACGCAC 59.271 55.000 0.00 0.00 33.14 5.34
777 794 0.324614 ACATGAGGTGGATCAACGCA 59.675 50.000 0.00 0.00 35.06 5.24
778 795 1.009829 GACATGAGGTGGATCAACGC 58.990 55.000 0.00 0.00 31.76 4.84
779 796 2.167281 AGAGACATGAGGTGGATCAACG 59.833 50.000 0.00 0.00 31.76 4.10
780 797 3.196469 TGAGAGACATGAGGTGGATCAAC 59.804 47.826 0.00 0.00 31.76 3.18
781 798 3.444029 TGAGAGACATGAGGTGGATCAA 58.556 45.455 0.00 0.00 31.76 2.57
782 799 3.105959 TGAGAGACATGAGGTGGATCA 57.894 47.619 0.00 0.00 0.00 2.92
783 800 3.006752 GGATGAGAGACATGAGGTGGATC 59.993 52.174 0.00 0.00 39.56 3.36
784 801 2.971330 GGATGAGAGACATGAGGTGGAT 59.029 50.000 0.00 0.00 39.56 3.41
785 802 2.392662 GGATGAGAGACATGAGGTGGA 58.607 52.381 0.00 0.00 39.56 4.02
786 803 1.415659 GGGATGAGAGACATGAGGTGG 59.584 57.143 0.00 0.00 39.56 4.61
787 804 1.068281 CGGGATGAGAGACATGAGGTG 59.932 57.143 0.00 0.00 39.56 4.00
788 805 1.063642 TCGGGATGAGAGACATGAGGT 60.064 52.381 0.00 0.00 39.56 3.85
789 806 1.697284 TCGGGATGAGAGACATGAGG 58.303 55.000 0.00 0.00 39.56 3.86
790 807 2.889678 TGATCGGGATGAGAGACATGAG 59.110 50.000 0.00 0.00 39.56 2.90
791 808 2.949447 TGATCGGGATGAGAGACATGA 58.051 47.619 0.00 0.00 39.56 3.07
792 809 3.388308 GTTGATCGGGATGAGAGACATG 58.612 50.000 0.00 0.00 39.56 3.21
793 810 2.366916 GGTTGATCGGGATGAGAGACAT 59.633 50.000 0.00 0.00 42.47 3.06
794 811 1.757118 GGTTGATCGGGATGAGAGACA 59.243 52.381 0.00 0.00 0.00 3.41
795 812 1.069358 GGGTTGATCGGGATGAGAGAC 59.931 57.143 0.00 0.00 0.00 3.36
796 813 1.414158 GGGTTGATCGGGATGAGAGA 58.586 55.000 0.00 0.00 0.00 3.10
797 814 0.394565 GGGGTTGATCGGGATGAGAG 59.605 60.000 0.00 0.00 0.00 3.20
798 815 0.031111 AGGGGTTGATCGGGATGAGA 60.031 55.000 0.00 0.00 0.00 3.27
799 816 0.394565 GAGGGGTTGATCGGGATGAG 59.605 60.000 0.00 0.00 0.00 2.90
800 817 0.031111 AGAGGGGTTGATCGGGATGA 60.031 55.000 0.00 0.00 0.00 2.92
801 818 0.394565 GAGAGGGGTTGATCGGGATG 59.605 60.000 0.00 0.00 0.00 3.51
802 819 0.031111 TGAGAGGGGTTGATCGGGAT 60.031 55.000 0.00 0.00 0.00 3.85
803 820 0.252513 TTGAGAGGGGTTGATCGGGA 60.253 55.000 0.00 0.00 0.00 5.14
804 821 0.179000 CTTGAGAGGGGTTGATCGGG 59.821 60.000 0.00 0.00 0.00 5.14
805 822 0.462759 GCTTGAGAGGGGTTGATCGG 60.463 60.000 0.00 0.00 0.00 4.18
806 823 0.539051 AGCTTGAGAGGGGTTGATCG 59.461 55.000 0.00 0.00 0.00 3.69
807 824 2.769095 AGTAGCTTGAGAGGGGTTGATC 59.231 50.000 0.00 0.00 0.00 2.92
808 825 2.839228 AGTAGCTTGAGAGGGGTTGAT 58.161 47.619 0.00 0.00 0.00 2.57
809 826 2.327325 AGTAGCTTGAGAGGGGTTGA 57.673 50.000 0.00 0.00 0.00 3.18
810 827 2.168728 GGTAGTAGCTTGAGAGGGGTTG 59.831 54.545 0.00 0.00 0.00 3.77
811 828 2.044630 AGGTAGTAGCTTGAGAGGGGTT 59.955 50.000 0.00 0.00 0.00 4.11
812 829 1.646977 AGGTAGTAGCTTGAGAGGGGT 59.353 52.381 0.00 0.00 0.00 4.95
813 830 2.463047 AGGTAGTAGCTTGAGAGGGG 57.537 55.000 0.00 0.00 0.00 4.79
814 831 4.173290 ACTAGGTAGTAGCTTGAGAGGG 57.827 50.000 16.10 0.00 34.13 4.30
815 832 4.202070 GCAACTAGGTAGTAGCTTGAGAGG 60.202 50.000 16.10 4.76 34.99 3.69
816 833 4.496673 CGCAACTAGGTAGTAGCTTGAGAG 60.497 50.000 16.10 6.57 34.99 3.20
817 834 3.377485 CGCAACTAGGTAGTAGCTTGAGA 59.623 47.826 16.10 0.00 34.99 3.27
818 835 3.128938 ACGCAACTAGGTAGTAGCTTGAG 59.871 47.826 16.10 9.16 34.99 3.02
819 836 3.087031 ACGCAACTAGGTAGTAGCTTGA 58.913 45.455 16.10 0.00 34.99 3.02
820 837 3.505464 ACGCAACTAGGTAGTAGCTTG 57.495 47.619 7.27 8.21 34.99 4.01
821 838 3.368116 CCAACGCAACTAGGTAGTAGCTT 60.368 47.826 7.27 0.00 34.99 3.74
822 839 2.165845 CCAACGCAACTAGGTAGTAGCT 59.834 50.000 7.12 7.12 34.99 3.32
823 840 2.537401 CCAACGCAACTAGGTAGTAGC 58.463 52.381 0.00 0.00 34.99 3.58
824 841 2.537401 GCCAACGCAACTAGGTAGTAG 58.463 52.381 0.00 0.00 34.99 2.57
825 842 1.205417 GGCCAACGCAACTAGGTAGTA 59.795 52.381 0.00 0.00 34.99 1.82
826 843 0.036671 GGCCAACGCAACTAGGTAGT 60.037 55.000 0.00 0.00 38.39 2.73
827 844 0.249398 AGGCCAACGCAACTAGGTAG 59.751 55.000 5.01 0.00 36.38 3.18
828 845 0.248289 GAGGCCAACGCAACTAGGTA 59.752 55.000 5.01 0.00 36.38 3.08
829 846 1.003718 GAGGCCAACGCAACTAGGT 60.004 57.895 5.01 0.00 36.38 3.08
830 847 1.003839 TGAGGCCAACGCAACTAGG 60.004 57.895 5.01 0.00 36.38 3.02
831 848 1.626654 CGTGAGGCCAACGCAACTAG 61.627 60.000 16.73 0.00 36.38 2.57
832 849 1.666553 CGTGAGGCCAACGCAACTA 60.667 57.895 16.73 0.00 36.38 2.24
833 850 2.972505 CGTGAGGCCAACGCAACT 60.973 61.111 16.73 0.00 36.38 3.16
834 851 2.970324 TCGTGAGGCCAACGCAAC 60.970 61.111 22.28 3.28 36.38 4.17
835 852 2.970324 GTCGTGAGGCCAACGCAA 60.970 61.111 22.28 7.12 36.38 4.85
836 853 3.741830 TTGTCGTGAGGCCAACGCA 62.742 57.895 22.28 19.62 36.38 5.24
837 854 2.954753 CTTGTCGTGAGGCCAACGC 61.955 63.158 22.28 17.76 32.11 4.84
838 855 1.557443 GACTTGTCGTGAGGCCAACG 61.557 60.000 21.37 21.37 32.11 4.10
839 856 1.228657 GGACTTGTCGTGAGGCCAAC 61.229 60.000 5.01 1.14 42.23 3.77
840 857 1.070786 GGACTTGTCGTGAGGCCAA 59.929 57.895 5.01 0.00 42.23 4.52
841 858 1.816863 GAGGACTTGTCGTGAGGCCA 61.817 60.000 5.01 0.00 45.30 5.36
842 859 1.079750 GAGGACTTGTCGTGAGGCC 60.080 63.158 0.00 0.00 43.05 5.19
843 860 0.667792 GTGAGGACTTGTCGTGAGGC 60.668 60.000 0.47 0.00 0.00 4.70
844 861 0.673985 TGTGAGGACTTGTCGTGAGG 59.326 55.000 0.47 0.00 0.00 3.86
845 862 1.338337 AGTGTGAGGACTTGTCGTGAG 59.662 52.381 0.47 0.00 0.00 3.51
846 863 1.399714 AGTGTGAGGACTTGTCGTGA 58.600 50.000 0.47 0.00 0.00 4.35
847 864 3.364889 TTAGTGTGAGGACTTGTCGTG 57.635 47.619 0.47 0.00 0.00 4.35
848 865 3.572682 TCATTAGTGTGAGGACTTGTCGT 59.427 43.478 0.00 0.00 0.00 4.34
849 866 3.921021 GTCATTAGTGTGAGGACTTGTCG 59.079 47.826 0.00 0.00 0.00 4.35
850 867 4.883083 TGTCATTAGTGTGAGGACTTGTC 58.117 43.478 0.00 0.00 0.00 3.18
851 868 4.955811 TGTCATTAGTGTGAGGACTTGT 57.044 40.909 0.00 0.00 0.00 3.16
852 869 5.579904 CAGATGTCATTAGTGTGAGGACTTG 59.420 44.000 0.00 0.00 0.00 3.16
853 870 5.728471 CAGATGTCATTAGTGTGAGGACTT 58.272 41.667 0.00 0.00 0.00 3.01
854 871 4.382470 GCAGATGTCATTAGTGTGAGGACT 60.382 45.833 0.00 0.00 0.00 3.85
855 872 3.868077 GCAGATGTCATTAGTGTGAGGAC 59.132 47.826 0.00 0.00 0.00 3.85
856 873 3.118629 GGCAGATGTCATTAGTGTGAGGA 60.119 47.826 0.00 0.00 0.00 3.71
857 874 3.201290 GGCAGATGTCATTAGTGTGAGG 58.799 50.000 0.00 0.00 0.00 3.86
858 875 3.865446 TGGCAGATGTCATTAGTGTGAG 58.135 45.455 0.00 0.00 0.00 3.51
859 876 3.979101 TGGCAGATGTCATTAGTGTGA 57.021 42.857 0.00 0.00 0.00 3.58
860 877 4.034858 GTCATGGCAGATGTCATTAGTGTG 59.965 45.833 0.00 0.00 38.49 3.82
861 878 4.194640 GTCATGGCAGATGTCATTAGTGT 58.805 43.478 0.00 0.00 38.49 3.55
862 879 4.193865 TGTCATGGCAGATGTCATTAGTG 58.806 43.478 0.00 0.00 38.49 2.74
863 880 4.492494 TGTCATGGCAGATGTCATTAGT 57.508 40.909 0.00 0.00 38.49 2.24
864 881 5.823209 TTTGTCATGGCAGATGTCATTAG 57.177 39.130 0.00 0.00 38.49 1.73
865 882 5.300034 GGATTTGTCATGGCAGATGTCATTA 59.700 40.000 8.24 0.00 38.49 1.90
866 883 4.098960 GGATTTGTCATGGCAGATGTCATT 59.901 41.667 8.24 0.00 38.49 2.57
867 884 3.635373 GGATTTGTCATGGCAGATGTCAT 59.365 43.478 8.24 0.00 41.75 3.06
868 885 3.018856 GGATTTGTCATGGCAGATGTCA 58.981 45.455 8.24 0.00 0.00 3.58
869 886 3.018856 TGGATTTGTCATGGCAGATGTC 58.981 45.455 8.24 1.39 0.00 3.06
870 887 2.756760 GTGGATTTGTCATGGCAGATGT 59.243 45.455 8.24 0.00 0.00 3.06
871 888 2.223409 CGTGGATTTGTCATGGCAGATG 60.223 50.000 8.24 0.00 0.00 2.90
872 889 2.019249 CGTGGATTTGTCATGGCAGAT 58.981 47.619 2.46 2.46 0.00 2.90
873 890 1.452110 CGTGGATTTGTCATGGCAGA 58.548 50.000 0.00 0.00 0.00 4.26
874 891 0.452987 CCGTGGATTTGTCATGGCAG 59.547 55.000 0.00 0.00 34.91 4.85
875 892 0.251121 ACCGTGGATTTGTCATGGCA 60.251 50.000 0.00 0.00 43.25 4.92
876 893 1.670811 CTACCGTGGATTTGTCATGGC 59.329 52.381 0.00 0.00 43.25 4.40
877 894 3.260475 TCTACCGTGGATTTGTCATGG 57.740 47.619 0.00 0.00 44.58 3.66
878 895 5.353956 TGAATTCTACCGTGGATTTGTCATG 59.646 40.000 7.05 0.00 0.00 3.07
879 896 5.354234 GTGAATTCTACCGTGGATTTGTCAT 59.646 40.000 7.05 0.00 0.00 3.06
880 897 4.693566 GTGAATTCTACCGTGGATTTGTCA 59.306 41.667 7.05 0.00 0.00 3.58
881 898 4.693566 TGTGAATTCTACCGTGGATTTGTC 59.306 41.667 7.05 0.00 0.00 3.18
882 899 4.647611 TGTGAATTCTACCGTGGATTTGT 58.352 39.130 7.05 0.00 0.00 2.83
883 900 5.049060 TGTTGTGAATTCTACCGTGGATTTG 60.049 40.000 7.05 0.00 0.00 2.32
884 901 5.067273 TGTTGTGAATTCTACCGTGGATTT 58.933 37.500 7.05 0.00 0.00 2.17
885 902 4.647611 TGTTGTGAATTCTACCGTGGATT 58.352 39.130 7.05 0.00 0.00 3.01
886 903 4.020573 TCTGTTGTGAATTCTACCGTGGAT 60.021 41.667 7.05 0.00 0.00 3.41
887 904 3.322541 TCTGTTGTGAATTCTACCGTGGA 59.677 43.478 7.05 0.00 0.00 4.02
888 905 3.659786 TCTGTTGTGAATTCTACCGTGG 58.340 45.455 7.05 0.00 0.00 4.94
889 906 6.201044 GGATATCTGTTGTGAATTCTACCGTG 59.799 42.308 7.05 0.00 0.00 4.94
890 907 6.127168 TGGATATCTGTTGTGAATTCTACCGT 60.127 38.462 7.05 0.00 0.00 4.83
891 908 6.280643 TGGATATCTGTTGTGAATTCTACCG 58.719 40.000 7.05 0.00 0.00 4.02
892 909 7.173907 CCATGGATATCTGTTGTGAATTCTACC 59.826 40.741 5.56 0.00 0.00 3.18
893 910 7.173907 CCCATGGATATCTGTTGTGAATTCTAC 59.826 40.741 15.22 4.25 0.00 2.59
894 911 7.226441 CCCATGGATATCTGTTGTGAATTCTA 58.774 38.462 15.22 0.00 0.00 2.10
900 917 3.392730 TCCCCATGGATATCTGTTGTGA 58.607 45.455 15.22 0.00 35.03 3.58
925 942 6.017109 ACATTAACAAAATTGACTGAGAGCGT 60.017 34.615 0.00 0.00 0.00 5.07
934 951 6.899114 ACGAGGAGACATTAACAAAATTGAC 58.101 36.000 0.00 0.00 0.00 3.18
950 969 1.883732 CAAGCCTTCGACGAGGAGA 59.116 57.895 8.76 0.00 39.25 3.71
958 977 2.485426 CTCTTTTCATGCAAGCCTTCGA 59.515 45.455 0.00 0.00 0.00 3.71
968 987 1.680207 GCCATCCTCCTCTTTTCATGC 59.320 52.381 0.00 0.00 0.00 4.06
997 1016 7.942990 ACGTTAAGTTTAACAAATCCCATCAA 58.057 30.769 13.44 0.00 42.34 2.57
998 1017 7.513371 ACGTTAAGTTTAACAAATCCCATCA 57.487 32.000 13.44 0.00 42.34 3.07
1054 1073 3.214845 GACCGCCCCGATCGTACT 61.215 66.667 15.09 0.00 0.00 2.73
1100 1119 4.232820 AGTCAATCTTACCATTTCCCCCAT 59.767 41.667 0.00 0.00 0.00 4.00
1131 1150 3.151554 AGCTTCAGCAATCAACACATCA 58.848 40.909 0.75 0.00 45.16 3.07
1143 1162 4.333913 TTTTAATGCCAAAGCTTCAGCA 57.666 36.364 21.48 21.48 45.16 4.41
1167 1186 1.061131 CTTTGCGCAAGTGATAGGACG 59.939 52.381 23.68 0.00 41.68 4.79
1169 1188 1.277842 TCCTTTGCGCAAGTGATAGGA 59.722 47.619 28.34 28.34 41.68 2.94
1247 1266 1.630148 CAACGATCGTCCTCCTTCAC 58.370 55.000 22.98 0.00 0.00 3.18
1248 1267 0.530744 CCAACGATCGTCCTCCTTCA 59.469 55.000 22.98 0.00 0.00 3.02
1265 1284 2.153898 AATTACAGCTGCTGCCCCCA 62.154 55.000 28.39 9.18 40.80 4.96
1433 1452 7.707624 ACATCATTTGTCAGGATTGTTACAT 57.292 32.000 0.00 0.00 30.89 2.29
1438 1457 7.943079 TCATTACATCATTTGTCAGGATTGT 57.057 32.000 0.00 0.00 39.87 2.71
1507 1526 1.459592 CTTAAGAAACACCTGTCGGCG 59.540 52.381 0.00 0.00 0.00 6.46
1510 1529 4.450080 GGGTTACTTAAGAAACACCTGTCG 59.550 45.833 10.09 0.00 0.00 4.35
1511 1530 5.618236 AGGGTTACTTAAGAAACACCTGTC 58.382 41.667 10.09 0.00 30.15 3.51
1512 1531 5.455755 GGAGGGTTACTTAAGAAACACCTGT 60.456 44.000 10.09 1.86 30.93 4.00
1514 1533 4.042560 GGGAGGGTTACTTAAGAAACACCT 59.957 45.833 10.09 9.52 32.42 4.00
1516 1535 4.976864 TGGGAGGGTTACTTAAGAAACAC 58.023 43.478 10.09 0.00 0.00 3.32
1518 1537 4.042560 ACCTGGGAGGGTTACTTAAGAAAC 59.957 45.833 10.09 1.96 40.58 2.78
1519 1538 4.042435 CACCTGGGAGGGTTACTTAAGAAA 59.958 45.833 10.09 0.00 40.58 2.52
1521 1540 3.178865 CACCTGGGAGGGTTACTTAAGA 58.821 50.000 10.09 0.00 40.58 2.10
1522 1541 2.355818 GCACCTGGGAGGGTTACTTAAG 60.356 54.545 0.00 0.00 40.58 1.85
1523 1542 1.631898 GCACCTGGGAGGGTTACTTAA 59.368 52.381 0.00 0.00 40.58 1.85
1524 1543 1.282382 GCACCTGGGAGGGTTACTTA 58.718 55.000 0.00 0.00 40.58 2.24
1526 1545 1.923909 GGCACCTGGGAGGGTTACT 60.924 63.158 0.00 0.00 40.58 2.24
1527 1546 1.911702 GAGGCACCTGGGAGGGTTAC 61.912 65.000 0.00 0.00 40.58 2.50
1529 1548 2.936032 GAGGCACCTGGGAGGGTT 60.936 66.667 0.00 0.00 40.58 4.11
1533 1552 2.804828 GAAACCGAGGCACCTGGGAG 62.805 65.000 23.03 0.00 43.43 4.30
1535 1554 2.359975 GAAACCGAGGCACCTGGG 60.360 66.667 15.56 15.56 45.71 4.45
1536 1555 1.228124 TTGAAACCGAGGCACCTGG 60.228 57.895 0.00 0.00 0.00 4.45
1537 1556 1.841663 CGTTGAAACCGAGGCACCTG 61.842 60.000 0.00 0.00 0.00 4.00
1538 1557 1.597027 CGTTGAAACCGAGGCACCT 60.597 57.895 0.00 0.00 0.00 4.00
1539 1558 2.943653 CGTTGAAACCGAGGCACC 59.056 61.111 0.00 0.00 0.00 5.01
1540 1559 2.251371 GCGTTGAAACCGAGGCAC 59.749 61.111 0.00 0.00 0.00 5.01
1541 1560 2.110213 AGCGTTGAAACCGAGGCA 59.890 55.556 0.00 0.00 32.69 4.75
1542 1561 2.556287 CAGCGTTGAAACCGAGGC 59.444 61.111 0.00 0.00 0.00 4.70
1543 1562 2.250939 TGCAGCGTTGAAACCGAGG 61.251 57.895 2.38 0.00 0.00 4.63
1544 1563 1.082756 GTGCAGCGTTGAAACCGAG 60.083 57.895 2.38 0.00 0.00 4.63
1545 1564 2.876879 CGTGCAGCGTTGAAACCGA 61.877 57.895 2.38 0.00 35.54 4.69
1546 1565 2.425124 CGTGCAGCGTTGAAACCG 60.425 61.111 2.38 0.00 35.54 4.44
1556 1575 1.801913 CTGTCCGACTACGTGCAGC 60.802 63.158 0.00 0.00 37.88 5.25
1557 1576 1.801913 GCTGTCCGACTACGTGCAG 60.802 63.158 0.00 0.00 39.96 4.41
1558 1577 2.257371 GCTGTCCGACTACGTGCA 59.743 61.111 0.00 0.00 37.88 4.57
1559 1578 2.506438 GGCTGTCCGACTACGTGC 60.506 66.667 0.00 0.00 37.88 5.34
1560 1579 1.154016 CTGGCTGTCCGACTACGTG 60.154 63.158 0.00 0.00 37.88 4.49
1561 1580 2.341101 CCTGGCTGTCCGACTACGT 61.341 63.158 0.00 0.00 37.88 3.57
1562 1581 2.490217 CCTGGCTGTCCGACTACG 59.510 66.667 0.00 0.00 39.43 3.51
1563 1582 1.668101 CTCCCTGGCTGTCCGACTAC 61.668 65.000 0.00 0.00 34.14 2.73
1564 1583 1.379977 CTCCCTGGCTGTCCGACTA 60.380 63.158 0.00 0.00 34.14 2.59
1566 1585 3.775654 CCTCCCTGGCTGTCCGAC 61.776 72.222 0.00 0.00 34.14 4.79
1578 1597 3.334054 AGGAGCACTTGGCCTCCC 61.334 66.667 3.32 0.00 46.50 4.30
1579 1598 2.129555 TTGAGGAGCACTTGGCCTCC 62.130 60.000 3.32 0.22 46.01 4.30
1580 1599 0.676151 CTTGAGGAGCACTTGGCCTC 60.676 60.000 3.32 0.00 46.60 4.70
1614 1941 1.003718 CGGCGGGAAGGAAGAGTTT 60.004 57.895 0.00 0.00 0.00 2.66
1617 1944 0.321298 TTTTCGGCGGGAAGGAAGAG 60.321 55.000 7.21 0.00 35.70 2.85
1629 1956 1.282875 GTCACCACAGCTTTTCGGC 59.717 57.895 0.00 0.00 0.00 5.54
1630 1957 1.197721 GATGTCACCACAGCTTTTCGG 59.802 52.381 0.00 0.00 35.92 4.30
1631 1958 1.872952 TGATGTCACCACAGCTTTTCG 59.127 47.619 0.00 0.00 39.83 3.46
1646 1973 6.318144 CCATTCATTTCAAGAGCTACTGATGT 59.682 38.462 0.00 0.00 0.00 3.06
1664 2004 1.077501 CTCCCGGTGCACCATTCAT 60.078 57.895 34.16 0.00 35.14 2.57
1671 2011 2.690778 GCATTGACTCCCGGTGCAC 61.691 63.158 8.80 8.80 35.93 4.57
1675 2015 2.643551 CATAAAGCATTGACTCCCGGT 58.356 47.619 0.00 0.00 0.00 5.28
1690 2030 6.403866 ACCACACAAGAATTCAAGCATAAA 57.596 33.333 8.44 0.00 0.00 1.40
1730 2070 8.591072 ACAAAGCTTAGGTGATTTACTACTACA 58.409 33.333 0.00 0.00 0.00 2.74
1731 2071 8.870879 CACAAAGCTTAGGTGATTTACTACTAC 58.129 37.037 20.76 0.00 34.52 2.73
1732 2072 7.548075 GCACAAAGCTTAGGTGATTTACTACTA 59.452 37.037 26.55 0.00 41.15 1.82
1733 2073 6.371825 GCACAAAGCTTAGGTGATTTACTACT 59.628 38.462 26.55 0.00 41.15 2.57
1786 2126 5.221263 GGGAAGTGCGATCTATCTACTCAAA 60.221 44.000 0.00 0.00 0.00 2.69
1789 2129 3.821600 TGGGAAGTGCGATCTATCTACTC 59.178 47.826 0.00 0.00 0.00 2.59
1790 2130 3.833732 TGGGAAGTGCGATCTATCTACT 58.166 45.455 0.00 0.00 0.00 2.57
1792 2132 4.152647 ACATGGGAAGTGCGATCTATCTA 58.847 43.478 0.00 0.00 0.00 1.98
1793 2133 2.968574 ACATGGGAAGTGCGATCTATCT 59.031 45.455 0.00 0.00 0.00 1.98
1795 2135 4.323028 CCATACATGGGAAGTGCGATCTAT 60.323 45.833 0.00 0.00 44.31 1.98
1797 2137 2.224378 CCATACATGGGAAGTGCGATCT 60.224 50.000 0.00 0.00 44.31 2.75
1798 2138 2.146342 CCATACATGGGAAGTGCGATC 58.854 52.381 0.00 0.00 44.31 3.69
1800 2140 3.778619 CCATACATGGGAAGTGCGA 57.221 52.632 0.00 0.00 44.31 5.10
1826 4356 4.210328 TGCGTGTCCGTTTTATGCTATATG 59.790 41.667 0.00 0.00 36.15 1.78
1827 4357 4.210537 GTGCGTGTCCGTTTTATGCTATAT 59.789 41.667 0.00 0.00 36.15 0.86
1834 5159 1.392168 CGATGTGCGTGTCCGTTTTAT 59.608 47.619 0.00 0.00 36.15 1.40
1872 5197 9.646427 GTGCATGAATTTATTTACCCTTTGTTA 57.354 29.630 0.00 0.00 0.00 2.41
1879 5204 7.326063 GCGAATAGTGCATGAATTTATTTACCC 59.674 37.037 0.00 0.00 0.00 3.69
1882 5207 7.856556 TCGCGAATAGTGCATGAATTTATTTA 58.143 30.769 6.20 0.00 0.00 1.40
1893 5275 3.660501 TCCTTATCGCGAATAGTGCAT 57.339 42.857 15.24 0.00 0.00 3.96
1904 5286 8.827677 ACTTATTGTTCAGTAATTCCTTATCGC 58.172 33.333 0.00 0.00 0.00 4.58
1948 5330 2.743636 ATATACCGCGGAATGGACAG 57.256 50.000 35.90 0.93 0.00 3.51
1975 5360 3.812611 TGTGCTGCCATGGGAATATAT 57.187 42.857 15.13 0.00 0.00 0.86
1984 5369 1.000052 TGTGATGTTTGTGCTGCCATG 60.000 47.619 0.00 0.00 0.00 3.66
2000 5385 7.045416 ACTTAATTACCACGCAGAATATGTGA 58.955 34.615 0.00 0.00 42.31 3.58
2006 5391 5.354234 CCAAGACTTAATTACCACGCAGAAT 59.646 40.000 0.00 0.00 0.00 2.40
2016 5401 8.730680 TCTCTTGCATTTCCAAGACTTAATTAC 58.269 33.333 0.81 0.00 44.49 1.89
2033 5418 5.176741 AGTCAAAATCCTCTCTCTTGCAT 57.823 39.130 0.00 0.00 0.00 3.96
2037 5422 6.296145 CCCTACAAGTCAAAATCCTCTCTCTT 60.296 42.308 0.00 0.00 0.00 2.85
2048 5433 8.713708 TGAATTAAATCCCCTACAAGTCAAAA 57.286 30.769 0.00 0.00 0.00 2.44
2062 5447 7.124147 TGAAGGGGATTCAGTTGAATTAAATCC 59.876 37.037 8.62 5.99 44.14 3.01
2063 5448 8.066612 TGAAGGGGATTCAGTTGAATTAAATC 57.933 34.615 8.62 5.61 44.14 2.17
2077 5462 2.388735 GATGGGGTTTGAAGGGGATTC 58.611 52.381 0.00 0.00 38.50 2.52
2089 5474 1.774254 TGCATAGGATTCGATGGGGTT 59.226 47.619 0.00 0.00 0.00 4.11
2090 5475 1.434188 TGCATAGGATTCGATGGGGT 58.566 50.000 0.00 0.00 0.00 4.95
2091 5476 2.636830 GATGCATAGGATTCGATGGGG 58.363 52.381 0.00 0.00 0.00 4.96
2093 5478 2.094026 TCGGATGCATAGGATTCGATGG 60.094 50.000 0.00 0.00 0.00 3.51
2095 5480 3.006859 TGTTCGGATGCATAGGATTCGAT 59.993 43.478 0.00 0.00 0.00 3.59
2096 5481 2.364002 TGTTCGGATGCATAGGATTCGA 59.636 45.455 0.00 0.00 0.00 3.71
2097 5482 2.754472 TGTTCGGATGCATAGGATTCG 58.246 47.619 0.00 0.00 0.00 3.34
2098 5483 3.058639 GCTTGTTCGGATGCATAGGATTC 60.059 47.826 0.00 0.00 0.00 2.52
2099 5484 2.880890 GCTTGTTCGGATGCATAGGATT 59.119 45.455 0.00 0.00 0.00 3.01
2100 5485 2.498167 GCTTGTTCGGATGCATAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
2101 5486 1.475034 GGCTTGTTCGGATGCATAGGA 60.475 52.381 0.00 0.00 0.00 2.94
2102 5487 0.947244 GGCTTGTTCGGATGCATAGG 59.053 55.000 0.00 0.00 0.00 2.57
2103 5488 1.331756 GTGGCTTGTTCGGATGCATAG 59.668 52.381 0.00 0.00 0.00 2.23
2104 5489 1.339535 TGTGGCTTGTTCGGATGCATA 60.340 47.619 0.00 0.00 0.00 3.14
2110 5495 0.817634 CACCTTGTGGCTTGTTCGGA 60.818 55.000 0.00 0.00 36.63 4.55
2122 5507 2.346284 TAAACCCAGCGCCACCTTGT 62.346 55.000 2.29 0.00 0.00 3.16
2124 5509 1.303317 CTAAACCCAGCGCCACCTT 60.303 57.895 2.29 0.00 0.00 3.50
2129 5514 3.699134 CTCCCCTAAACCCAGCGCC 62.699 68.421 2.29 0.00 0.00 6.53
2132 5517 1.303282 CCACTCCCCTAAACCCAGC 59.697 63.158 0.00 0.00 0.00 4.85
2134 5519 2.598787 CGCCACTCCCCTAAACCCA 61.599 63.158 0.00 0.00 0.00 4.51
2136 5521 1.078637 GACGCCACTCCCCTAAACC 60.079 63.158 0.00 0.00 0.00 3.27
2137 5522 1.447314 CGACGCCACTCCCCTAAAC 60.447 63.158 0.00 0.00 0.00 2.01
2140 5525 2.125326 CATCGACGCCACTCCCCTA 61.125 63.158 0.00 0.00 0.00 3.53
2152 5537 0.173708 AAGACCCGCTCTTCATCGAC 59.826 55.000 0.00 0.00 33.53 4.20
2170 5555 2.194597 GAGGTGGTGGTGGTGCAA 59.805 61.111 0.00 0.00 0.00 4.08
2175 5560 1.002134 GTGATGGAGGTGGTGGTGG 60.002 63.158 0.00 0.00 0.00 4.61
2180 5565 0.034896 GTTGTCGTGATGGAGGTGGT 59.965 55.000 0.00 0.00 0.00 4.16
2202 5587 2.619849 CCCTCTGTGAAGGTGATGCATT 60.620 50.000 0.00 0.00 34.34 3.56
2203 5588 1.064906 CCCTCTGTGAAGGTGATGCAT 60.065 52.381 0.00 0.00 34.34 3.96
2204 5589 0.325933 CCCTCTGTGAAGGTGATGCA 59.674 55.000 0.00 0.00 34.34 3.96
2205 5590 0.393537 CCCCTCTGTGAAGGTGATGC 60.394 60.000 0.00 0.00 34.34 3.91
2206 5591 1.209019 CTCCCCTCTGTGAAGGTGATG 59.791 57.143 0.00 0.00 34.34 3.07
2207 5592 1.577736 CTCCCCTCTGTGAAGGTGAT 58.422 55.000 0.00 0.00 34.34 3.06
2208 5593 1.194781 GCTCCCCTCTGTGAAGGTGA 61.195 60.000 0.00 0.00 34.34 4.02
2210 5595 0.474660 AAGCTCCCCTCTGTGAAGGT 60.475 55.000 0.00 0.00 34.34 3.50
2211 5596 0.251634 GAAGCTCCCCTCTGTGAAGG 59.748 60.000 0.00 0.00 36.08 3.46
2212 5597 0.979665 TGAAGCTCCCCTCTGTGAAG 59.020 55.000 0.00 0.00 0.00 3.02
2213 5598 0.687354 GTGAAGCTCCCCTCTGTGAA 59.313 55.000 0.00 0.00 0.00 3.18
2214 5599 0.471780 TGTGAAGCTCCCCTCTGTGA 60.472 55.000 0.00 0.00 0.00 3.58
2215 5600 0.397941 TTGTGAAGCTCCCCTCTGTG 59.602 55.000 0.00 0.00 0.00 3.66
2216 5601 1.140312 TTTGTGAAGCTCCCCTCTGT 58.860 50.000 0.00 0.00 0.00 3.41
2217 5602 1.202806 TGTTTGTGAAGCTCCCCTCTG 60.203 52.381 0.00 0.00 0.00 3.35
2219 5604 1.202818 AGTGTTTGTGAAGCTCCCCTC 60.203 52.381 0.00 0.00 0.00 4.30
2220 5605 0.846693 AGTGTTTGTGAAGCTCCCCT 59.153 50.000 0.00 0.00 0.00 4.79
2221 5606 2.152016 GTAGTGTTTGTGAAGCTCCCC 58.848 52.381 0.00 0.00 0.00 4.81
2261 5646 5.479724 CCCTAGAGCTGATTGTCTGATCATA 59.520 44.000 0.00 0.00 35.62 2.15
2263 5648 3.640498 CCCTAGAGCTGATTGTCTGATCA 59.360 47.826 0.00 0.00 33.93 2.92
2264 5649 3.006752 CCCCTAGAGCTGATTGTCTGATC 59.993 52.174 0.00 0.00 32.04 2.92
2266 5651 2.292521 ACCCCTAGAGCTGATTGTCTGA 60.293 50.000 0.00 0.00 0.00 3.27
2271 5656 3.356529 AACAACCCCTAGAGCTGATTG 57.643 47.619 0.00 0.00 0.00 2.67
2274 5659 1.351017 CCAAACAACCCCTAGAGCTGA 59.649 52.381 0.00 0.00 0.00 4.26
2284 5669 0.249280 CGGCAGAAACCAAACAACCC 60.249 55.000 0.00 0.00 0.00 4.11
2285 5670 0.874175 GCGGCAGAAACCAAACAACC 60.874 55.000 0.00 0.00 0.00 3.77
2286 5671 0.102300 AGCGGCAGAAACCAAACAAC 59.898 50.000 1.45 0.00 0.00 3.32
2287 5672 0.102120 CAGCGGCAGAAACCAAACAA 59.898 50.000 1.45 0.00 0.00 2.83
2288 5673 1.732917 CAGCGGCAGAAACCAAACA 59.267 52.632 1.45 0.00 0.00 2.83
2289 5674 1.661509 GCAGCGGCAGAAACCAAAC 60.662 57.895 3.18 0.00 40.72 2.93
2290 5675 2.727544 GCAGCGGCAGAAACCAAA 59.272 55.556 3.18 0.00 40.72 3.28
2291 5676 3.294493 GGCAGCGGCAGAAACCAA 61.294 61.111 11.88 0.00 43.71 3.67
2304 5689 1.823899 GATTTGGTAGGGCGGGCAG 60.824 63.158 3.27 0.00 0.00 4.85
2305 5690 1.932156 ATGATTTGGTAGGGCGGGCA 61.932 55.000 3.27 0.00 0.00 5.36
2306 5691 1.152756 ATGATTTGGTAGGGCGGGC 60.153 57.895 0.00 0.00 0.00 6.13
2307 5692 0.823356 CCATGATTTGGTAGGGCGGG 60.823 60.000 0.00 0.00 40.99 6.13
2308 5693 0.823356 CCCATGATTTGGTAGGGCGG 60.823 60.000 0.00 0.00 44.83 6.13
2309 5694 2.719376 CCCATGATTTGGTAGGGCG 58.281 57.895 0.00 0.00 44.83 6.13
2311 5696 1.455383 GCGCCCATGATTTGGTAGGG 61.455 60.000 0.00 0.00 44.83 3.53
2312 5697 1.785041 CGCGCCCATGATTTGGTAGG 61.785 60.000 0.00 0.00 44.83 3.18
2313 5698 1.648720 CGCGCCCATGATTTGGTAG 59.351 57.895 0.00 0.00 44.83 3.18
2314 5699 1.821759 CCGCGCCCATGATTTGGTA 60.822 57.895 0.00 0.00 44.83 3.25
2315 5700 3.140141 CCGCGCCCATGATTTGGT 61.140 61.111 0.00 0.00 44.83 3.67
2316 5701 2.709883 AACCGCGCCCATGATTTGG 61.710 57.895 0.00 0.00 46.00 3.28
2317 5702 1.516821 CAACCGCGCCCATGATTTG 60.517 57.895 0.00 0.00 0.00 2.32
2318 5703 2.709883 CCAACCGCGCCCATGATTT 61.710 57.895 0.00 0.00 0.00 2.17
2319 5704 3.140141 CCAACCGCGCCCATGATT 61.140 61.111 0.00 0.00 0.00 2.57
2320 5705 4.424711 ACCAACCGCGCCCATGAT 62.425 61.111 0.00 0.00 0.00 2.45
2344 5729 2.606272 GCCGATTCGTCCGTCTATTTTT 59.394 45.455 5.20 0.00 0.00 1.94
2345 5730 2.199236 GCCGATTCGTCCGTCTATTTT 58.801 47.619 5.20 0.00 0.00 1.82
2346 5731 1.537562 GGCCGATTCGTCCGTCTATTT 60.538 52.381 5.20 0.00 0.00 1.40
2347 5732 0.031721 GGCCGATTCGTCCGTCTATT 59.968 55.000 5.20 0.00 0.00 1.73
2348 5733 1.105167 TGGCCGATTCGTCCGTCTAT 61.105 55.000 5.20 0.00 0.00 1.98
2349 5734 1.750018 TGGCCGATTCGTCCGTCTA 60.750 57.895 5.20 0.00 0.00 2.59
2350 5735 3.066190 TGGCCGATTCGTCCGTCT 61.066 61.111 5.20 0.00 0.00 4.18
2351 5736 2.884207 GTGGCCGATTCGTCCGTC 60.884 66.667 5.20 0.00 0.00 4.79
2352 5737 4.446413 GGTGGCCGATTCGTCCGT 62.446 66.667 5.20 0.00 0.00 4.69
2358 5743 4.778143 ACTGCGGGTGGCCGATTC 62.778 66.667 0.00 0.00 42.61 2.52
2359 5744 4.344865 AACTGCGGGTGGCCGATT 62.345 61.111 0.00 0.00 42.61 3.34
2360 5745 4.778143 GAACTGCGGGTGGCCGAT 62.778 66.667 0.00 0.00 42.61 4.18
2363 5748 4.778143 ATCGAACTGCGGGTGGCC 62.778 66.667 0.00 0.00 42.61 5.36
2364 5749 3.195698 GATCGAACTGCGGGTGGC 61.196 66.667 0.00 0.00 41.33 5.01
2365 5750 1.375396 TTGATCGAACTGCGGGTGG 60.375 57.895 0.00 0.00 41.33 4.61
2366 5751 0.948623 TGTTGATCGAACTGCGGGTG 60.949 55.000 0.00 0.00 41.33 4.61
2367 5752 0.250124 TTGTTGATCGAACTGCGGGT 60.250 50.000 0.00 0.00 41.33 5.28
2368 5753 1.086696 ATTGTTGATCGAACTGCGGG 58.913 50.000 0.00 0.00 41.33 6.13
2369 5754 2.900122 AATTGTTGATCGAACTGCGG 57.100 45.000 0.00 0.00 41.33 5.69
2370 5755 2.910482 CCAAATTGTTGATCGAACTGCG 59.090 45.455 0.00 0.00 36.83 5.18
2371 5756 2.663119 GCCAAATTGTTGATCGAACTGC 59.337 45.455 0.00 0.00 36.83 4.40
2372 5757 4.161333 GAGCCAAATTGTTGATCGAACTG 58.839 43.478 0.00 1.22 36.83 3.16
2373 5758 3.820467 TGAGCCAAATTGTTGATCGAACT 59.180 39.130 0.00 0.00 36.83 3.01
2374 5759 4.159377 TGAGCCAAATTGTTGATCGAAC 57.841 40.909 0.00 0.00 36.83 3.95
2375 5760 4.844998 TTGAGCCAAATTGTTGATCGAA 57.155 36.364 0.00 0.00 36.83 3.71
2376 5761 4.844998 TTTGAGCCAAATTGTTGATCGA 57.155 36.364 0.00 0.00 36.83 3.59
2377 5762 5.221880 TCTTTTGAGCCAAATTGTTGATCG 58.778 37.500 1.89 0.00 36.83 3.69
2378 5763 6.925165 TCTTCTTTTGAGCCAAATTGTTGATC 59.075 34.615 1.89 0.00 36.83 2.92
2379 5764 6.819284 TCTTCTTTTGAGCCAAATTGTTGAT 58.181 32.000 1.89 0.00 36.83 2.57
2380 5765 6.219417 TCTTCTTTTGAGCCAAATTGTTGA 57.781 33.333 1.89 0.00 36.83 3.18
2381 5766 5.464389 CCTCTTCTTTTGAGCCAAATTGTTG 59.536 40.000 1.89 0.00 33.19 3.33
2382 5767 5.453762 CCCTCTTCTTTTGAGCCAAATTGTT 60.454 40.000 1.89 0.00 33.19 2.83
2383 5768 4.039609 CCCTCTTCTTTTGAGCCAAATTGT 59.960 41.667 1.89 0.00 33.19 2.71
2384 5769 4.563061 CCCTCTTCTTTTGAGCCAAATTG 58.437 43.478 1.89 0.00 33.19 2.32
2385 5770 3.007290 GCCCTCTTCTTTTGAGCCAAATT 59.993 43.478 1.89 0.00 33.19 1.82
2386 5771 2.564504 GCCCTCTTCTTTTGAGCCAAAT 59.435 45.455 1.89 0.00 33.19 2.32
2387 5772 1.963515 GCCCTCTTCTTTTGAGCCAAA 59.036 47.619 0.00 0.00 0.00 3.28
2388 5773 1.620822 GCCCTCTTCTTTTGAGCCAA 58.379 50.000 0.00 0.00 0.00 4.52
2389 5774 0.606401 CGCCCTCTTCTTTTGAGCCA 60.606 55.000 0.00 0.00 0.00 4.75
2390 5775 1.308783 CCGCCCTCTTCTTTTGAGCC 61.309 60.000 0.00 0.00 0.00 4.70
2391 5776 0.321653 TCCGCCCTCTTCTTTTGAGC 60.322 55.000 0.00 0.00 0.00 4.26
2392 5777 1.731720 CTCCGCCCTCTTCTTTTGAG 58.268 55.000 0.00 0.00 0.00 3.02
2393 5778 0.321653 GCTCCGCCCTCTTCTTTTGA 60.322 55.000 0.00 0.00 0.00 2.69
2394 5779 1.308783 GGCTCCGCCCTCTTCTTTTG 61.309 60.000 0.00 0.00 44.06 2.44
2395 5780 1.002011 GGCTCCGCCCTCTTCTTTT 60.002 57.895 0.00 0.00 44.06 2.27
2396 5781 2.671682 GGCTCCGCCCTCTTCTTT 59.328 61.111 0.00 0.00 44.06 2.52
2417 5802 0.967380 ATGTTGTTGGGCTAGCCTGC 60.967 55.000 32.18 21.52 36.10 4.85
2418 5803 1.549203 AATGTTGTTGGGCTAGCCTG 58.451 50.000 32.18 0.00 36.10 4.85
2419 5804 2.299867 CAAAATGTTGTTGGGCTAGCCT 59.700 45.455 32.18 7.96 36.10 4.58
2428 5813 3.980775 GGATCGACACCAAAATGTTGTTG 59.019 43.478 5.72 0.00 35.71 3.33
2438 5823 1.234821 GCTGTTTGGATCGACACCAA 58.765 50.000 18.12 18.12 44.27 3.67
2441 5826 0.798776 CTGGCTGTTTGGATCGACAC 59.201 55.000 0.00 0.00 0.00 3.67
2442 5827 0.955428 GCTGGCTGTTTGGATCGACA 60.955 55.000 0.00 0.00 0.00 4.35
2443 5828 1.648467 GGCTGGCTGTTTGGATCGAC 61.648 60.000 0.00 0.00 0.00 4.20
2445 5830 2.409870 GGGCTGGCTGTTTGGATCG 61.410 63.158 0.00 0.00 0.00 3.69
2447 5832 2.361610 CGGGCTGGCTGTTTGGAT 60.362 61.111 1.18 0.00 0.00 3.41
2448 5833 4.659172 CCGGGCTGGCTGTTTGGA 62.659 66.667 9.36 0.00 0.00 3.53
2458 5843 1.327690 TAGTTGTCTAGGCCGGGCTG 61.328 60.000 38.60 26.94 0.00 4.85
2459 5844 1.001248 TAGTTGTCTAGGCCGGGCT 59.999 57.895 34.70 34.70 0.00 5.19
2460 5845 1.143401 GTAGTTGTCTAGGCCGGGC 59.857 63.158 22.67 22.67 0.00 6.13
2461 5846 1.821258 GGTAGTTGTCTAGGCCGGG 59.179 63.158 2.18 0.00 0.00 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.