Multiple sequence alignment - TraesCS3B01G390700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G390700 chr3B 100.000 4541 0 0 1 4541 615747962 615752502 0.000000e+00 8386.0
1 TraesCS3B01G390700 chr3B 97.047 2167 52 7 1681 3845 616311083 616308927 0.000000e+00 3637.0
2 TraesCS3B01G390700 chr3B 93.705 2081 85 33 1681 3729 615772740 615774806 0.000000e+00 3075.0
3 TraesCS3B01G390700 chr3B 97.845 696 14 1 3847 4541 616314580 616313885 0.000000e+00 1201.0
4 TraesCS3B01G390700 chr3B 89.228 492 21 10 864 1352 616311877 616311415 1.820000e-163 586.0
5 TraesCS3B01G390700 chr3B 89.024 492 22 10 864 1352 615771946 615772408 8.470000e-162 580.0
6 TraesCS3B01G390700 chr3A 89.537 3240 160 63 641 3827 606437094 606433981 0.000000e+00 3940.0
7 TraesCS3B01G390700 chr3A 84.058 69 9 2 3 70 319954060 319954127 1.050000e-06 65.8
8 TraesCS3B01G390700 chr3D 96.610 2065 69 1 1572 3635 462850804 462852868 0.000000e+00 3424.0
9 TraesCS3B01G390700 chr3D 93.909 2200 86 27 1572 3744 463191846 463189668 0.000000e+00 3277.0
10 TraesCS3B01G390700 chr3D 90.496 726 35 19 574 1281 462849620 462850329 0.000000e+00 928.0
11 TraesCS3B01G390700 chr3D 91.118 653 28 16 643 1281 463192957 463192321 0.000000e+00 857.0
12 TraesCS3B01G390700 chr3D 87.600 250 24 6 1432 1679 462850471 462850715 2.670000e-72 283.0
13 TraesCS3B01G390700 chr3D 87.805 246 25 4 1439 1682 463192174 463191932 2.670000e-72 283.0
14 TraesCS3B01G390700 chr3D 95.890 73 3 0 3651 3723 462852941 462853013 7.980000e-23 119.0
15 TraesCS3B01G390700 chr3D 89.888 89 5 2 1344 1431 462850339 462850424 1.340000e-20 111.0
16 TraesCS3B01G390700 chr3D 89.888 89 5 2 1344 1431 463192311 463192226 1.340000e-20 111.0
17 TraesCS3B01G390700 chr1B 89.453 1754 172 8 1793 3544 512174641 512172899 0.000000e+00 2202.0
18 TraesCS3B01G390700 chr1B 92.857 224 13 3 997 1220 512175834 512175614 5.670000e-84 322.0
19 TraesCS3B01G390700 chr1D 89.172 1764 177 9 1794 3554 382236377 382234625 0.000000e+00 2187.0
20 TraesCS3B01G390700 chr1D 92.982 228 12 4 997 1223 382237644 382237420 3.390000e-86 329.0
21 TraesCS3B01G390700 chr1D 85.915 71 8 2 1 70 31025267 31025336 1.750000e-09 75.0
22 TraesCS3B01G390700 chr1D 88.889 54 5 1 18 71 8264125 8264177 1.050000e-06 65.8
23 TraesCS3B01G390700 chr1A 89.096 1770 177 10 1780 3545 482337744 482335987 0.000000e+00 2185.0
24 TraesCS3B01G390700 chr1A 92.411 224 14 3 997 1220 482338982 482338762 2.640000e-82 316.0
25 TraesCS3B01G390700 chr1A 93.333 75 5 0 379 453 52234565 52234491 1.340000e-20 111.0
26 TraesCS3B01G390700 chr1A 80.000 150 26 4 345 492 85343110 85343257 1.730000e-19 108.0
27 TraesCS3B01G390700 chr4A 87.764 1659 198 5 1793 3449 110638836 110637181 0.000000e+00 1934.0
28 TraesCS3B01G390700 chr2D 93.000 700 45 3 3846 4541 620336111 620335412 0.000000e+00 1018.0
29 TraesCS3B01G390700 chr2D 92.816 696 43 4 3847 4541 553390563 553389874 0.000000e+00 1002.0
30 TraesCS3B01G390700 chr2D 82.857 70 10 2 2 70 607087670 607087602 1.360000e-05 62.1
31 TraesCS3B01G390700 chr5D 92.683 697 48 2 3846 4541 535116846 535117540 0.000000e+00 1002.0
32 TraesCS3B01G390700 chr5D 92.011 701 52 2 3843 4541 47512206 47512904 0.000000e+00 981.0
33 TraesCS3B01G390700 chr5D 77.957 186 28 10 244 422 386744039 386744218 2.230000e-18 104.0
34 TraesCS3B01G390700 chr4D 92.429 700 48 5 3847 4541 79066354 79067053 0.000000e+00 994.0
35 TraesCS3B01G390700 chr4D 92.253 697 51 2 3846 4541 28318018 28317324 0.000000e+00 985.0
36 TraesCS3B01G390700 chr6D 92.143 700 50 3 3843 4541 337235801 337236496 0.000000e+00 983.0
37 TraesCS3B01G390700 chr6D 85.915 71 8 2 1 70 30297187 30297256 1.750000e-09 75.0
38 TraesCS3B01G390700 chr7D 92.034 703 49 4 3843 4541 236845614 236846313 0.000000e+00 981.0
39 TraesCS3B01G390700 chr7D 83.575 207 32 2 285 491 82903651 82903855 4.640000e-45 193.0
40 TraesCS3B01G390700 chr7D 82.051 195 33 2 297 491 495834112 495833920 1.010000e-36 165.0
41 TraesCS3B01G390700 chr7D 81.208 149 24 4 319 466 89597714 89597569 2.870000e-22 117.0
42 TraesCS3B01G390700 chr2B 91.071 224 17 3 997 1220 209131666 209131886 2.660000e-77 300.0
43 TraesCS3B01G390700 chr7A 86.555 119 14 2 340 457 66167856 66167739 3.690000e-26 130.0
44 TraesCS3B01G390700 chr5A 92.500 80 5 1 379 457 548500507 548500428 3.710000e-21 113.0
45 TraesCS3B01G390700 chr5B 83.333 114 15 4 345 457 487340746 487340856 8.040000e-18 102.0
46 TraesCS3B01G390700 chr4B 85.915 71 8 2 1 70 662554071 662554140 1.750000e-09 75.0
47 TraesCS3B01G390700 chr7B 89.362 47 4 1 24 70 577670107 577670062 1.760000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G390700 chr3B 615747962 615752502 4540 False 8386.0 8386 100.000000 1 4541 1 chr3B.!!$F1 4540
1 TraesCS3B01G390700 chr3B 615771946 615774806 2860 False 1827.5 3075 91.364500 864 3729 2 chr3B.!!$F2 2865
2 TraesCS3B01G390700 chr3B 616308927 616314580 5653 True 1808.0 3637 94.706667 864 4541 3 chr3B.!!$R1 3677
3 TraesCS3B01G390700 chr3A 606433981 606437094 3113 True 3940.0 3940 89.537000 641 3827 1 chr3A.!!$R1 3186
4 TraesCS3B01G390700 chr3D 463189668 463192957 3289 True 1132.0 3277 90.680000 643 3744 4 chr3D.!!$R1 3101
5 TraesCS3B01G390700 chr3D 462849620 462853013 3393 False 973.0 3424 92.096800 574 3723 5 chr3D.!!$F1 3149
6 TraesCS3B01G390700 chr1B 512172899 512175834 2935 True 1262.0 2202 91.155000 997 3544 2 chr1B.!!$R1 2547
7 TraesCS3B01G390700 chr1D 382234625 382237644 3019 True 1258.0 2187 91.077000 997 3554 2 chr1D.!!$R1 2557
8 TraesCS3B01G390700 chr1A 482335987 482338982 2995 True 1250.5 2185 90.753500 997 3545 2 chr1A.!!$R2 2548
9 TraesCS3B01G390700 chr4A 110637181 110638836 1655 True 1934.0 1934 87.764000 1793 3449 1 chr4A.!!$R1 1656
10 TraesCS3B01G390700 chr2D 620335412 620336111 699 True 1018.0 1018 93.000000 3846 4541 1 chr2D.!!$R3 695
11 TraesCS3B01G390700 chr2D 553389874 553390563 689 True 1002.0 1002 92.816000 3847 4541 1 chr2D.!!$R1 694
12 TraesCS3B01G390700 chr5D 535116846 535117540 694 False 1002.0 1002 92.683000 3846 4541 1 chr5D.!!$F3 695
13 TraesCS3B01G390700 chr5D 47512206 47512904 698 False 981.0 981 92.011000 3843 4541 1 chr5D.!!$F1 698
14 TraesCS3B01G390700 chr4D 79066354 79067053 699 False 994.0 994 92.429000 3847 4541 1 chr4D.!!$F1 694
15 TraesCS3B01G390700 chr4D 28317324 28318018 694 True 985.0 985 92.253000 3846 4541 1 chr4D.!!$R1 695
16 TraesCS3B01G390700 chr6D 337235801 337236496 695 False 983.0 983 92.143000 3843 4541 1 chr6D.!!$F2 698
17 TraesCS3B01G390700 chr7D 236845614 236846313 699 False 981.0 981 92.034000 3843 4541 1 chr7D.!!$F2 698

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
977 2825 0.109913 AGTTCCTGTTTCCCCGTTCC 59.890 55.0 0.00 0.0 0.00 3.62 F
1764 4535 0.111089 GAGCGCAAGTCGAACTGTTG 60.111 55.0 11.47 0.0 41.67 3.33 F
2544 5316 0.327924 TGTTCCGGAAGTGCATGGAT 59.672 50.0 19.50 0.0 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2187 4958 0.174845 CGCCACCAAGGTCGAAGATA 59.825 55.000 0.00 0.0 40.67 1.98 R
2662 5434 2.047274 GCACAGCTCCTTGCCGTA 60.047 61.111 0.72 0.0 44.23 4.02 R
4063 6948 0.254747 ACGAGTGAGAGAGGGAGAGG 59.745 60.000 0.00 0.0 0.00 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.831343 CATCTTGTTAATGCAGCGCC 58.169 50.000 2.29 0.00 0.00 6.53
21 22 1.226379 CTTGTTAATGCAGCGCCGG 60.226 57.895 2.29 0.00 0.00 6.13
23 24 1.029408 TTGTTAATGCAGCGCCGGAT 61.029 50.000 5.05 0.00 0.00 4.18
25 26 1.451207 TTAATGCAGCGCCGGATGT 60.451 52.632 5.05 0.00 0.00 3.06
28 29 0.819259 AATGCAGCGCCGGATGTAAT 60.819 50.000 5.05 0.00 0.00 1.89
29 30 0.819259 ATGCAGCGCCGGATGTAATT 60.819 50.000 5.05 0.00 0.00 1.40
30 31 1.009675 GCAGCGCCGGATGTAATTG 60.010 57.895 5.05 0.00 0.00 2.32
32 33 1.229428 CAGCGCCGGATGTAATTGAT 58.771 50.000 5.05 0.00 0.00 2.57
36 37 3.055819 AGCGCCGGATGTAATTGATATCT 60.056 43.478 5.05 0.00 0.00 1.98
37 38 4.159693 AGCGCCGGATGTAATTGATATCTA 59.840 41.667 5.05 0.00 0.00 1.98
38 39 4.267928 GCGCCGGATGTAATTGATATCTAC 59.732 45.833 5.05 0.00 0.00 2.59
39 40 4.804139 CGCCGGATGTAATTGATATCTACC 59.196 45.833 5.05 0.00 0.00 3.18
40 41 5.394224 CGCCGGATGTAATTGATATCTACCT 60.394 44.000 5.05 0.00 0.00 3.08
42 43 6.313905 GCCGGATGTAATTGATATCTACCTTG 59.686 42.308 5.05 0.00 0.00 3.61
43 44 7.611770 CCGGATGTAATTGATATCTACCTTGA 58.388 38.462 0.00 0.00 0.00 3.02
44 45 8.260818 CCGGATGTAATTGATATCTACCTTGAT 58.739 37.037 0.00 0.00 0.00 2.57
87 88 5.738619 AAAAAGAAGAAGTTGTGTGGGTT 57.261 34.783 0.00 0.00 0.00 4.11
89 90 3.644966 AGAAGAAGTTGTGTGGGTTCA 57.355 42.857 0.00 0.00 0.00 3.18
92 93 4.339247 AGAAGAAGTTGTGTGGGTTCATTG 59.661 41.667 0.00 0.00 0.00 2.82
93 94 2.958355 AGAAGTTGTGTGGGTTCATTGG 59.042 45.455 0.00 0.00 0.00 3.16
95 96 1.063266 AGTTGTGTGGGTTCATTGGGT 60.063 47.619 0.00 0.00 0.00 4.51
97 98 0.850100 TGTGTGGGTTCATTGGGTCT 59.150 50.000 0.00 0.00 0.00 3.85
98 99 2.058705 TGTGTGGGTTCATTGGGTCTA 58.941 47.619 0.00 0.00 0.00 2.59
99 100 2.039746 TGTGTGGGTTCATTGGGTCTAG 59.960 50.000 0.00 0.00 0.00 2.43
100 101 2.039879 GTGTGGGTTCATTGGGTCTAGT 59.960 50.000 0.00 0.00 0.00 2.57
103 104 2.983192 TGGGTTCATTGGGTCTAGTTGA 59.017 45.455 0.00 0.00 0.00 3.18
104 105 3.396276 TGGGTTCATTGGGTCTAGTTGAA 59.604 43.478 0.00 0.00 0.00 2.69
106 107 4.506802 GGGTTCATTGGGTCTAGTTGAAGT 60.507 45.833 0.00 0.00 0.00 3.01
107 108 4.455877 GGTTCATTGGGTCTAGTTGAAGTG 59.544 45.833 0.00 0.00 0.00 3.16
108 109 4.974645 TCATTGGGTCTAGTTGAAGTGT 57.025 40.909 0.00 0.00 0.00 3.55
109 110 5.304686 TCATTGGGTCTAGTTGAAGTGTT 57.695 39.130 0.00 0.00 0.00 3.32
110 111 5.690865 TCATTGGGTCTAGTTGAAGTGTTT 58.309 37.500 0.00 0.00 0.00 2.83
113 114 4.850680 TGGGTCTAGTTGAAGTGTTTGTT 58.149 39.130 0.00 0.00 0.00 2.83
114 115 4.879545 TGGGTCTAGTTGAAGTGTTTGTTC 59.120 41.667 0.00 0.00 0.00 3.18
115 116 5.123936 GGGTCTAGTTGAAGTGTTTGTTCT 58.876 41.667 0.00 0.00 0.00 3.01
117 118 5.815740 GGTCTAGTTGAAGTGTTTGTTCTCA 59.184 40.000 0.00 0.00 0.00 3.27
118 119 6.018669 GGTCTAGTTGAAGTGTTTGTTCTCAG 60.019 42.308 0.00 0.00 0.00 3.35
120 121 5.551760 AGTTGAAGTGTTTGTTCTCAGTG 57.448 39.130 0.00 0.00 0.00 3.66
121 122 4.396166 AGTTGAAGTGTTTGTTCTCAGTGG 59.604 41.667 0.00 0.00 0.00 4.00
123 124 1.299541 AGTGTTTGTTCTCAGTGGCG 58.700 50.000 0.00 0.00 0.00 5.69
124 125 1.014352 GTGTTTGTTCTCAGTGGCGT 58.986 50.000 0.00 0.00 0.00 5.68
125 126 1.003866 GTGTTTGTTCTCAGTGGCGTC 60.004 52.381 0.00 0.00 0.00 5.19
126 127 0.232303 GTTTGTTCTCAGTGGCGTCG 59.768 55.000 0.00 0.00 0.00 5.12
127 128 1.495584 TTTGTTCTCAGTGGCGTCGC 61.496 55.000 9.22 9.22 0.00 5.19
128 129 2.049063 GTTCTCAGTGGCGTCGCT 60.049 61.111 18.11 0.00 0.00 4.93
129 130 1.211969 GTTCTCAGTGGCGTCGCTA 59.788 57.895 18.11 8.52 31.63 4.26
130 131 0.179134 GTTCTCAGTGGCGTCGCTAT 60.179 55.000 18.11 0.01 31.63 2.97
132 133 2.202743 TCAGTGGCGTCGCTATGC 60.203 61.111 18.11 0.00 36.86 3.14
133 134 2.509111 CAGTGGCGTCGCTATGCA 60.509 61.111 18.11 3.24 39.56 3.96
135 136 1.884464 AGTGGCGTCGCTATGCATG 60.884 57.895 18.11 0.26 39.56 4.06
136 137 2.588596 TGGCGTCGCTATGCATGG 60.589 61.111 18.11 7.77 39.56 3.66
137 138 4.017877 GGCGTCGCTATGCATGGC 62.018 66.667 23.91 23.91 39.56 4.40
139 140 1.664649 GCGTCGCTATGCATGGCTA 60.665 57.895 29.22 18.48 37.58 3.93
142 143 2.606108 CGTCGCTATGCATGGCTAATA 58.394 47.619 29.22 11.84 31.46 0.98
143 144 3.190079 CGTCGCTATGCATGGCTAATAT 58.810 45.455 29.22 0.00 31.46 1.28
144 145 4.359706 CGTCGCTATGCATGGCTAATATA 58.640 43.478 29.22 7.95 31.46 0.86
145 146 4.207224 CGTCGCTATGCATGGCTAATATAC 59.793 45.833 29.22 16.64 31.46 1.47
146 147 5.352284 GTCGCTATGCATGGCTAATATACT 58.648 41.667 29.22 0.00 31.46 2.12
147 148 5.460419 GTCGCTATGCATGGCTAATATACTC 59.540 44.000 29.22 4.64 31.46 2.59
148 149 4.747108 CGCTATGCATGGCTAATATACTCC 59.253 45.833 29.22 0.18 31.46 3.85
150 151 4.510167 ATGCATGGCTAATATACTCCCC 57.490 45.455 0.00 0.00 0.00 4.81
152 153 2.420129 GCATGGCTAATATACTCCCCCG 60.420 54.545 0.00 0.00 0.00 5.73
153 154 1.946984 TGGCTAATATACTCCCCCGG 58.053 55.000 0.00 0.00 0.00 5.73
154 155 1.150560 TGGCTAATATACTCCCCCGGT 59.849 52.381 0.00 0.00 0.00 5.28
155 156 2.263545 GGCTAATATACTCCCCCGGTT 58.736 52.381 0.00 0.00 0.00 4.44
156 157 2.235650 GGCTAATATACTCCCCCGGTTC 59.764 54.545 0.00 0.00 0.00 3.62
157 158 3.171528 GCTAATATACTCCCCCGGTTCT 58.828 50.000 0.00 0.00 0.00 3.01
159 160 4.961099 GCTAATATACTCCCCCGGTTCTAT 59.039 45.833 0.00 0.00 0.00 1.98
160 161 6.131961 GCTAATATACTCCCCCGGTTCTATA 58.868 44.000 0.00 0.00 0.00 1.31
162 163 7.289549 GCTAATATACTCCCCCGGTTCTATAAT 59.710 40.741 0.00 0.00 0.00 1.28
163 164 9.210228 CTAATATACTCCCCCGGTTCTATAATT 57.790 37.037 0.00 0.00 0.00 1.40
164 165 8.458951 AATATACTCCCCCGGTTCTATAATTT 57.541 34.615 0.00 0.00 0.00 1.82
165 166 6.775234 ATACTCCCCCGGTTCTATAATTTT 57.225 37.500 0.00 0.00 0.00 1.82
167 168 4.228895 ACTCCCCCGGTTCTATAATTTTGT 59.771 41.667 0.00 0.00 0.00 2.83
168 169 5.195848 TCCCCCGGTTCTATAATTTTGTT 57.804 39.130 0.00 0.00 0.00 2.83
169 170 5.581975 TCCCCCGGTTCTATAATTTTGTTT 58.418 37.500 0.00 0.00 0.00 2.83
170 171 6.729428 TCCCCCGGTTCTATAATTTTGTTTA 58.271 36.000 0.00 0.00 0.00 2.01
171 172 6.829811 TCCCCCGGTTCTATAATTTTGTTTAG 59.170 38.462 0.00 0.00 0.00 1.85
172 173 6.460537 CCCCCGGTTCTATAATTTTGTTTAGC 60.461 42.308 0.00 0.00 0.00 3.09
173 174 6.095720 CCCCGGTTCTATAATTTTGTTTAGCA 59.904 38.462 0.00 0.00 0.00 3.49
174 175 7.363094 CCCCGGTTCTATAATTTTGTTTAGCAA 60.363 37.037 0.00 0.00 34.87 3.91
175 176 8.194769 CCCGGTTCTATAATTTTGTTTAGCAAT 58.805 33.333 0.00 0.00 36.89 3.56
176 177 9.233232 CCGGTTCTATAATTTTGTTTAGCAATC 57.767 33.333 0.00 0.00 36.89 2.67
181 182 9.693739 TCTATAATTTTGTTTAGCAATCCAGGA 57.306 29.630 0.00 0.00 36.89 3.86
186 187 9.657419 AATTTTGTTTAGCAATCCAGGAATTAG 57.343 29.630 0.00 0.00 36.89 1.73
187 188 8.415950 TTTTGTTTAGCAATCCAGGAATTAGA 57.584 30.769 0.00 0.00 36.89 2.10
188 189 8.415950 TTTGTTTAGCAATCCAGGAATTAGAA 57.584 30.769 0.00 0.00 36.89 2.10
190 191 7.826690 TGTTTAGCAATCCAGGAATTAGAAAC 58.173 34.615 0.00 3.19 0.00 2.78
191 192 7.450014 TGTTTAGCAATCCAGGAATTAGAAACA 59.550 33.333 14.10 14.10 31.51 2.83
192 193 8.470002 GTTTAGCAATCCAGGAATTAGAAACAT 58.530 33.333 0.00 0.00 0.00 2.71
193 194 6.461110 AGCAATCCAGGAATTAGAAACATG 57.539 37.500 0.00 0.00 0.00 3.21
194 195 5.954150 AGCAATCCAGGAATTAGAAACATGT 59.046 36.000 0.00 0.00 0.00 3.21
195 196 7.118723 AGCAATCCAGGAATTAGAAACATGTA 58.881 34.615 0.00 0.00 0.00 2.29
196 197 7.067494 AGCAATCCAGGAATTAGAAACATGTAC 59.933 37.037 0.00 0.00 0.00 2.90
197 198 7.148086 GCAATCCAGGAATTAGAAACATGTACA 60.148 37.037 0.00 0.00 0.00 2.90
198 199 8.906867 CAATCCAGGAATTAGAAACATGTACAT 58.093 33.333 1.41 1.41 0.00 2.29
200 201 6.761242 TCCAGGAATTAGAAACATGTACATCG 59.239 38.462 5.07 4.65 0.00 3.84
202 203 7.279981 CCAGGAATTAGAAACATGTACATCGAA 59.720 37.037 5.07 1.65 0.00 3.71
203 204 8.664798 CAGGAATTAGAAACATGTACATCGAAA 58.335 33.333 5.07 0.00 0.00 3.46
215 216 8.207685 CATGTACATCGAAAATACATGCATTC 57.792 34.615 23.12 0.00 45.38 2.67
216 217 7.313951 TGTACATCGAAAATACATGCATTCA 57.686 32.000 0.00 0.00 0.00 2.57
217 218 7.929159 TGTACATCGAAAATACATGCATTCAT 58.071 30.769 0.00 0.00 0.00 2.57
218 219 9.050601 TGTACATCGAAAATACATGCATTCATA 57.949 29.630 0.00 0.00 0.00 2.15
224 225 9.061435 TCGAAAATACATGCATTCATATAACCA 57.939 29.630 0.00 0.00 0.00 3.67
226 227 9.410556 GAAAATACATGCATTCATATAACCACC 57.589 33.333 0.00 0.00 0.00 4.61
227 228 8.710749 AAATACATGCATTCATATAACCACCT 57.289 30.769 0.00 0.00 0.00 4.00
229 230 8.710749 ATACATGCATTCATATAACCACCTTT 57.289 30.769 0.00 0.00 0.00 3.11
230 231 7.042797 ACATGCATTCATATAACCACCTTTC 57.957 36.000 0.00 0.00 0.00 2.62
231 232 6.835488 ACATGCATTCATATAACCACCTTTCT 59.165 34.615 0.00 0.00 0.00 2.52
233 234 9.017509 CATGCATTCATATAACCACCTTTCTAT 57.982 33.333 0.00 0.00 0.00 1.98
235 236 9.420118 TGCATTCATATAACCACCTTTCTATTT 57.580 29.630 0.00 0.00 0.00 1.40
243 244 8.893563 ATAACCACCTTTCTATTTTTCATGGA 57.106 30.769 0.00 0.00 0.00 3.41
244 245 7.610580 AACCACCTTTCTATTTTTCATGGAA 57.389 32.000 0.00 0.00 0.00 3.53
247 248 8.096414 ACCACCTTTCTATTTTTCATGGAAATG 58.904 33.333 0.00 0.00 31.34 2.32
249 250 9.492973 CACCTTTCTATTTTTCATGGAAATGTT 57.507 29.630 0.00 0.00 29.92 2.71
261 262 9.619316 TTTCATGGAAATGTTAAGTATTGAACG 57.381 29.630 0.00 0.00 0.00 3.95
263 264 8.788806 TCATGGAAATGTTAAGTATTGAACGTT 58.211 29.630 0.00 0.00 36.56 3.99
265 266 8.789881 TGGAAATGTTAAGTATTGAACGTTTG 57.210 30.769 9.72 0.00 42.17 2.93
266 267 7.863375 TGGAAATGTTAAGTATTGAACGTTTGG 59.137 33.333 9.72 0.00 42.17 3.28
267 268 7.863877 GGAAATGTTAAGTATTGAACGTTTGGT 59.136 33.333 9.72 0.00 42.17 3.67
268 269 9.881529 GAAATGTTAAGTATTGAACGTTTGGTA 57.118 29.630 9.72 0.00 42.17 3.25
269 270 9.667989 AAATGTTAAGTATTGAACGTTTGGTAC 57.332 29.630 0.46 6.07 41.14 3.34
280 281 2.875080 GTTTGGTACGAGCACATGAC 57.125 50.000 0.00 0.00 0.00 3.06
281 282 2.139917 GTTTGGTACGAGCACATGACA 58.860 47.619 0.00 0.00 0.00 3.58
282 283 2.535012 TTGGTACGAGCACATGACAA 57.465 45.000 0.00 0.00 0.00 3.18
283 284 2.078849 TGGTACGAGCACATGACAAG 57.921 50.000 0.00 0.00 0.00 3.16
284 285 0.721718 GGTACGAGCACATGACAAGC 59.278 55.000 0.00 0.00 0.00 4.01
286 287 1.798223 GTACGAGCACATGACAAGCAA 59.202 47.619 0.00 0.00 0.00 3.91
287 288 1.308047 ACGAGCACATGACAAGCAAA 58.692 45.000 0.00 0.00 0.00 3.68
288 289 1.002468 ACGAGCACATGACAAGCAAAC 60.002 47.619 0.00 0.00 0.00 2.93
290 291 1.002468 GAGCACATGACAAGCAAACGT 60.002 47.619 0.00 0.00 0.00 3.99
291 292 1.405105 AGCACATGACAAGCAAACGTT 59.595 42.857 0.00 0.00 0.00 3.99
293 294 2.602660 GCACATGACAAGCAAACGTTTT 59.397 40.909 11.66 0.00 0.00 2.43
294 295 3.061965 GCACATGACAAGCAAACGTTTTT 59.938 39.130 11.66 0.93 0.00 1.94
295 296 4.778773 GCACATGACAAGCAAACGTTTTTC 60.779 41.667 11.66 6.37 0.00 2.29
299 300 4.738124 TGACAAGCAAACGTTTTTCATGA 58.262 34.783 11.66 0.00 0.00 3.07
300 301 4.560819 TGACAAGCAAACGTTTTTCATGAC 59.439 37.500 11.66 10.03 0.00 3.06
301 302 4.489810 ACAAGCAAACGTTTTTCATGACA 58.510 34.783 11.66 0.00 0.00 3.58
302 303 4.326009 ACAAGCAAACGTTTTTCATGACAC 59.674 37.500 11.66 0.00 0.00 3.67
303 304 3.443976 AGCAAACGTTTTTCATGACACC 58.556 40.909 11.66 0.00 0.00 4.16
305 306 3.862845 GCAAACGTTTTTCATGACACCTT 59.137 39.130 11.66 0.00 0.00 3.50
307 308 5.517054 GCAAACGTTTTTCATGACACCTTTA 59.483 36.000 11.66 0.00 0.00 1.85
308 309 6.291585 GCAAACGTTTTTCATGACACCTTTAG 60.292 38.462 11.66 0.00 0.00 1.85
309 310 6.445357 AACGTTTTTCATGACACCTTTAGT 57.555 33.333 0.00 0.00 0.00 2.24
310 311 6.445357 ACGTTTTTCATGACACCTTTAGTT 57.555 33.333 0.00 0.00 0.00 2.24
311 312 6.262601 ACGTTTTTCATGACACCTTTAGTTG 58.737 36.000 0.00 0.00 0.00 3.16
312 313 6.094325 ACGTTTTTCATGACACCTTTAGTTGA 59.906 34.615 0.00 0.00 0.00 3.18
314 315 5.666969 TTTCATGACACCTTTAGTTGACG 57.333 39.130 0.00 0.00 0.00 4.35
316 317 4.556233 TCATGACACCTTTAGTTGACGAG 58.444 43.478 0.00 0.00 0.00 4.18
317 318 3.380479 TGACACCTTTAGTTGACGAGG 57.620 47.619 0.00 0.00 35.39 4.63
318 319 2.036733 TGACACCTTTAGTTGACGAGGG 59.963 50.000 0.00 0.00 33.51 4.30
319 320 1.346722 ACACCTTTAGTTGACGAGGGG 59.653 52.381 0.00 0.00 38.67 4.79
320 321 1.621814 CACCTTTAGTTGACGAGGGGA 59.378 52.381 0.00 0.00 34.53 4.81
322 323 2.236395 ACCTTTAGTTGACGAGGGGATG 59.764 50.000 0.00 0.00 33.51 3.51
323 324 2.420129 CCTTTAGTTGACGAGGGGATGG 60.420 54.545 0.00 0.00 0.00 3.51
324 325 0.539986 TTAGTTGACGAGGGGATGGC 59.460 55.000 0.00 0.00 0.00 4.40
325 326 0.616395 TAGTTGACGAGGGGATGGCA 60.616 55.000 0.00 0.00 0.00 4.92
327 328 1.026718 GTTGACGAGGGGATGGCAAG 61.027 60.000 0.00 0.00 0.00 4.01
328 329 1.488705 TTGACGAGGGGATGGCAAGT 61.489 55.000 0.00 0.00 0.00 3.16
329 330 1.299976 GACGAGGGGATGGCAAGTT 59.700 57.895 0.00 0.00 0.00 2.66
331 332 0.541863 ACGAGGGGATGGCAAGTTAG 59.458 55.000 0.00 0.00 0.00 2.34
332 333 0.179045 CGAGGGGATGGCAAGTTAGG 60.179 60.000 0.00 0.00 0.00 2.69
334 335 1.230212 GGGGATGGCAAGTTAGGGG 59.770 63.158 0.00 0.00 0.00 4.79
335 336 1.455773 GGGATGGCAAGTTAGGGGC 60.456 63.158 0.00 0.00 0.00 5.80
336 337 1.306296 GGATGGCAAGTTAGGGGCA 59.694 57.895 0.00 0.00 44.07 5.36
337 338 0.324275 GGATGGCAAGTTAGGGGCAA 60.324 55.000 0.00 0.00 43.13 4.52
338 339 1.106285 GATGGCAAGTTAGGGGCAAG 58.894 55.000 0.00 0.00 43.13 4.01
339 340 0.972471 ATGGCAAGTTAGGGGCAAGC 60.972 55.000 0.00 0.00 43.13 4.01
342 343 1.178534 GCAAGTTAGGGGCAAGCACA 61.179 55.000 0.00 0.00 0.00 4.57
344 345 1.474077 CAAGTTAGGGGCAAGCACATC 59.526 52.381 0.00 0.00 0.00 3.06
345 346 0.698238 AGTTAGGGGCAAGCACATCA 59.302 50.000 0.00 0.00 0.00 3.07
346 347 1.075374 AGTTAGGGGCAAGCACATCAA 59.925 47.619 0.00 0.00 0.00 2.57
347 348 2.102578 GTTAGGGGCAAGCACATCAAT 58.897 47.619 0.00 0.00 0.00 2.57
348 349 2.497273 GTTAGGGGCAAGCACATCAATT 59.503 45.455 0.00 0.00 0.00 2.32
349 350 1.648116 AGGGGCAAGCACATCAATTT 58.352 45.000 0.00 0.00 0.00 1.82
385 386 9.659830 AAATAAACATGAAGTACGAAAGTTGTC 57.340 29.630 0.00 0.00 46.40 3.18
386 387 6.671614 AAACATGAAGTACGAAAGTTGTCA 57.328 33.333 0.00 0.00 46.40 3.58
387 388 6.861065 AACATGAAGTACGAAAGTTGTCAT 57.139 33.333 0.00 0.00 46.40 3.06
389 390 4.725556 TGAAGTACGAAAGTTGTCATGC 57.274 40.909 0.00 0.00 46.40 4.06
390 391 4.377021 TGAAGTACGAAAGTTGTCATGCT 58.623 39.130 0.00 0.00 46.40 3.79
391 392 4.814234 TGAAGTACGAAAGTTGTCATGCTT 59.186 37.500 0.00 0.00 46.40 3.91
392 393 4.732285 AGTACGAAAGTTGTCATGCTTG 57.268 40.909 0.00 0.00 46.40 4.01
393 394 3.498397 AGTACGAAAGTTGTCATGCTTGG 59.502 43.478 0.00 0.00 46.40 3.61
394 395 1.001378 ACGAAAGTTGTCATGCTTGGC 60.001 47.619 0.00 0.00 46.40 4.52
395 396 1.001487 CGAAAGTTGTCATGCTTGGCA 60.001 47.619 2.24 2.24 44.86 4.92
396 397 2.543445 CGAAAGTTGTCATGCTTGGCAA 60.543 45.455 14.96 14.96 44.90 4.52
402 403 3.921119 TGTCATGCTTGGCAACTAAAG 57.079 42.857 4.13 0.00 43.62 1.85
403 404 3.221771 TGTCATGCTTGGCAACTAAAGT 58.778 40.909 4.13 0.00 43.62 2.66
419 420 6.525578 ACTAAAGTTGTCATCCTCGTATCA 57.474 37.500 0.00 0.00 0.00 2.15
421 422 5.407407 AAAGTTGTCATCCTCGTATCACT 57.593 39.130 0.00 0.00 0.00 3.41
422 423 6.525578 AAAGTTGTCATCCTCGTATCACTA 57.474 37.500 0.00 0.00 0.00 2.74
423 424 6.525578 AAGTTGTCATCCTCGTATCACTAA 57.474 37.500 0.00 0.00 0.00 2.24
424 425 6.525578 AGTTGTCATCCTCGTATCACTAAA 57.474 37.500 0.00 0.00 0.00 1.85
425 426 6.331061 AGTTGTCATCCTCGTATCACTAAAC 58.669 40.000 0.00 0.00 0.00 2.01
426 427 6.153000 AGTTGTCATCCTCGTATCACTAAACT 59.847 38.462 0.00 0.00 0.00 2.66
427 428 6.525578 TGTCATCCTCGTATCACTAAACTT 57.474 37.500 0.00 0.00 0.00 2.66
428 429 6.330278 TGTCATCCTCGTATCACTAAACTTG 58.670 40.000 0.00 0.00 0.00 3.16
429 430 5.232414 GTCATCCTCGTATCACTAAACTTGC 59.768 44.000 0.00 0.00 0.00 4.01
430 431 4.119442 TCCTCGTATCACTAAACTTGCC 57.881 45.455 0.00 0.00 0.00 4.52
431 432 3.512329 TCCTCGTATCACTAAACTTGCCA 59.488 43.478 0.00 0.00 0.00 4.92
432 433 4.161565 TCCTCGTATCACTAAACTTGCCAT 59.838 41.667 0.00 0.00 0.00 4.40
433 434 5.361571 TCCTCGTATCACTAAACTTGCCATA 59.638 40.000 0.00 0.00 0.00 2.74
434 435 6.046593 CCTCGTATCACTAAACTTGCCATAA 58.953 40.000 0.00 0.00 0.00 1.90
435 436 6.537301 CCTCGTATCACTAAACTTGCCATAAA 59.463 38.462 0.00 0.00 0.00 1.40
436 437 7.065324 CCTCGTATCACTAAACTTGCCATAAAA 59.935 37.037 0.00 0.00 0.00 1.52
437 438 8.325421 TCGTATCACTAAACTTGCCATAAAAA 57.675 30.769 0.00 0.00 0.00 1.94
465 466 4.076394 TGGAGTTGCCATGTACTTTTACC 58.924 43.478 0.00 0.00 43.33 2.85
467 468 3.998341 GAGTTGCCATGTACTTTTACCGA 59.002 43.478 0.00 0.00 0.00 4.69
468 469 4.391155 AGTTGCCATGTACTTTTACCGAA 58.609 39.130 0.00 0.00 0.00 4.30
469 470 5.007682 AGTTGCCATGTACTTTTACCGAAT 58.992 37.500 0.00 0.00 0.00 3.34
470 471 4.955925 TGCCATGTACTTTTACCGAATG 57.044 40.909 0.00 0.00 0.00 2.67
471 472 4.328536 TGCCATGTACTTTTACCGAATGT 58.671 39.130 0.00 0.00 0.00 2.71
472 473 4.762765 TGCCATGTACTTTTACCGAATGTT 59.237 37.500 0.00 0.00 0.00 2.71
473 474 5.241949 TGCCATGTACTTTTACCGAATGTTT 59.758 36.000 0.00 0.00 0.00 2.83
474 475 5.571357 GCCATGTACTTTTACCGAATGTTTG 59.429 40.000 0.00 0.00 0.00 2.93
475 476 6.568844 GCCATGTACTTTTACCGAATGTTTGA 60.569 38.462 0.00 0.00 0.00 2.69
477 478 8.670135 CCATGTACTTTTACCGAATGTTTGATA 58.330 33.333 0.00 0.00 0.00 2.15
478 479 9.485591 CATGTACTTTTACCGAATGTTTGATAC 57.514 33.333 0.00 0.00 0.00 2.24
479 480 8.836268 TGTACTTTTACCGAATGTTTGATACT 57.164 30.769 0.00 0.00 0.00 2.12
486 487 9.878667 TTTACCGAATGTTTGATACTTATCAGA 57.121 29.630 0.00 0.00 42.99 3.27
488 489 8.964476 ACCGAATGTTTGATACTTATCAGATT 57.036 30.769 0.00 1.13 42.99 2.40
489 490 9.046296 ACCGAATGTTTGATACTTATCAGATTC 57.954 33.333 12.47 12.47 42.99 2.52
490 491 8.499162 CCGAATGTTTGATACTTATCAGATTCC 58.501 37.037 14.59 0.00 42.99 3.01
491 492 9.045223 CGAATGTTTGATACTTATCAGATTCCA 57.955 33.333 14.59 3.49 42.99 3.53
502 503 7.398024 ACTTATCAGATTCCAATATGCTACCC 58.602 38.462 0.00 0.00 0.00 3.69
503 504 5.848286 ATCAGATTCCAATATGCTACCCA 57.152 39.130 0.00 0.00 0.00 4.51
506 507 6.430864 TCAGATTCCAATATGCTACCCAAAA 58.569 36.000 0.00 0.00 0.00 2.44
507 508 6.547141 TCAGATTCCAATATGCTACCCAAAAG 59.453 38.462 0.00 0.00 0.00 2.27
508 509 5.835280 AGATTCCAATATGCTACCCAAAAGG 59.165 40.000 0.00 0.00 43.78 3.11
510 511 4.792068 TCCAATATGCTACCCAAAAGGAG 58.208 43.478 0.00 0.00 39.89 3.69
511 512 4.476846 TCCAATATGCTACCCAAAAGGAGA 59.523 41.667 0.00 0.00 39.89 3.71
512 513 5.044476 TCCAATATGCTACCCAAAAGGAGAA 60.044 40.000 0.00 0.00 39.89 2.87
513 514 5.300286 CCAATATGCTACCCAAAAGGAGAAG 59.700 44.000 0.00 0.00 39.89 2.85
514 515 2.200373 TGCTACCCAAAAGGAGAAGC 57.800 50.000 0.00 0.00 39.89 3.86
516 517 2.158534 TGCTACCCAAAAGGAGAAGCAA 60.159 45.455 0.00 0.00 42.41 3.91
517 518 2.890945 GCTACCCAAAAGGAGAAGCAAA 59.109 45.455 0.00 0.00 38.48 3.68
518 519 3.320826 GCTACCCAAAAGGAGAAGCAAAA 59.679 43.478 0.00 0.00 38.48 2.44
519 520 4.202212 GCTACCCAAAAGGAGAAGCAAAAA 60.202 41.667 0.00 0.00 38.48 1.94
540 541 6.774354 AAAACATATGCAGTGAAAAGCAAG 57.226 33.333 1.58 0.00 44.88 4.01
541 542 5.710513 AACATATGCAGTGAAAAGCAAGA 57.289 34.783 1.58 0.00 44.88 3.02
543 544 5.647589 ACATATGCAGTGAAAAGCAAGATG 58.352 37.500 1.58 0.00 44.88 2.90
544 545 5.416639 ACATATGCAGTGAAAAGCAAGATGA 59.583 36.000 15.20 0.00 44.88 2.92
545 546 3.909776 TGCAGTGAAAAGCAAGATGAG 57.090 42.857 0.00 0.00 37.90 2.90
547 548 3.633525 TGCAGTGAAAAGCAAGATGAGTT 59.366 39.130 0.00 0.00 37.90 3.01
549 550 4.678742 GCAGTGAAAAGCAAGATGAGTTTC 59.321 41.667 0.00 0.00 0.00 2.78
550 551 5.734220 GCAGTGAAAAGCAAGATGAGTTTCA 60.734 40.000 0.00 0.00 36.21 2.69
553 554 8.242053 CAGTGAAAAGCAAGATGAGTTTCATAT 58.758 33.333 10.21 0.00 39.59 1.78
556 557 8.239314 TGAAAAGCAAGATGAGTTTCATATGAC 58.761 33.333 4.48 0.00 37.20 3.06
557 558 6.690194 AAGCAAGATGAGTTTCATATGACC 57.310 37.500 4.48 0.00 37.20 4.02
558 559 5.748402 AGCAAGATGAGTTTCATATGACCA 58.252 37.500 4.48 2.08 37.20 4.02
559 560 5.587844 AGCAAGATGAGTTTCATATGACCAC 59.412 40.000 4.48 5.54 37.20 4.16
560 561 5.355071 GCAAGATGAGTTTCATATGACCACA 59.645 40.000 4.48 4.68 37.20 4.17
562 563 6.550938 AGATGAGTTTCATATGACCACAGA 57.449 37.500 4.48 0.00 37.20 3.41
563 564 7.134362 AGATGAGTTTCATATGACCACAGAT 57.866 36.000 4.48 2.02 37.20 2.90
564 565 7.571919 AGATGAGTTTCATATGACCACAGATT 58.428 34.615 4.48 0.00 37.20 2.40
565 566 8.051535 AGATGAGTTTCATATGACCACAGATTT 58.948 33.333 4.48 0.00 37.20 2.17
566 567 7.615582 TGAGTTTCATATGACCACAGATTTC 57.384 36.000 4.48 0.18 0.00 2.17
567 568 6.313658 TGAGTTTCATATGACCACAGATTTCG 59.686 38.462 4.48 0.00 0.00 3.46
569 570 6.655003 AGTTTCATATGACCACAGATTTCGTT 59.345 34.615 4.48 0.00 0.00 3.85
574 575 8.447833 TCATATGACCACAGATTTCGTTTTTAC 58.552 33.333 0.00 0.00 0.00 2.01
575 576 6.627395 ATGACCACAGATTTCGTTTTTACA 57.373 33.333 0.00 0.00 0.00 2.41
576 577 6.627395 TGACCACAGATTTCGTTTTTACAT 57.373 33.333 0.00 0.00 0.00 2.29
579 580 7.976734 TGACCACAGATTTCGTTTTTACATTTT 59.023 29.630 0.00 0.00 0.00 1.82
580 581 8.125728 ACCACAGATTTCGTTTTTACATTTTG 57.874 30.769 0.00 0.00 0.00 2.44
581 582 7.062848 CCACAGATTTCGTTTTTACATTTTGC 58.937 34.615 0.00 0.00 0.00 3.68
582 583 7.254252 CCACAGATTTCGTTTTTACATTTTGCA 60.254 33.333 0.00 0.00 0.00 4.08
583 584 8.113062 CACAGATTTCGTTTTTACATTTTGCAA 58.887 29.630 0.00 0.00 0.00 4.08
584 585 8.660373 ACAGATTTCGTTTTTACATTTTGCAAA 58.340 25.926 8.05 8.05 0.00 3.68
629 630 8.417273 ACAGTAATGGGCCATATATTTTTACC 57.583 34.615 21.54 2.92 0.00 2.85
631 632 5.993748 AATGGGCCATATATTTTTACCCG 57.006 39.130 21.54 0.00 38.79 5.28
635 636 5.536916 TGGGCCATATATTTTTACCCGAAAG 59.463 40.000 0.00 0.00 38.79 2.62
671 676 4.284550 AAGAAAGCCCAGCCGCCA 62.285 61.111 0.00 0.00 0.00 5.69
710 715 1.546961 AGAACCTACGAGACAGGGTG 58.453 55.000 0.00 0.00 37.51 4.61
772 785 2.728435 AACCGTCATACCGCCCTCC 61.728 63.158 0.00 0.00 0.00 4.30
817 832 3.270877 CCTTCCCGAACATTCTCGAAAT 58.729 45.455 0.00 0.00 41.44 2.17
911 2756 2.182825 CAGCAAGCAATCAAGCGATTC 58.817 47.619 0.00 0.00 39.96 2.52
923 2768 2.630098 CAAGCGATTCCCCTCAGATCTA 59.370 50.000 0.00 0.00 0.00 1.98
926 2771 4.877773 AGCGATTCCCCTCAGATCTATAT 58.122 43.478 0.00 0.00 0.00 0.86
929 2774 6.065374 GCGATTCCCCTCAGATCTATATAGA 58.935 44.000 14.76 14.76 36.65 1.98
930 2775 6.206634 GCGATTCCCCTCAGATCTATATAGAG 59.793 46.154 17.22 5.08 35.50 2.43
931 2776 7.287061 CGATTCCCCTCAGATCTATATAGAGT 58.713 42.308 17.22 5.26 35.50 3.24
933 2778 9.131791 GATTCCCCTCAGATCTATATAGAGTTC 57.868 40.741 17.22 11.06 35.50 3.01
934 2779 7.838991 TCCCCTCAGATCTATATAGAGTTCT 57.161 40.000 17.22 12.96 35.50 3.01
935 2780 8.935142 TCCCCTCAGATCTATATAGAGTTCTA 57.065 38.462 17.22 5.81 35.50 2.10
936 2781 8.774183 TCCCCTCAGATCTATATAGAGTTCTAC 58.226 40.741 17.22 5.52 35.50 2.59
937 2782 7.713507 CCCCTCAGATCTATATAGAGTTCTACG 59.286 44.444 17.22 9.95 35.50 3.51
964 2809 2.415625 CCGATTTCGTCTTCGAGTTCCT 60.416 50.000 0.00 0.00 46.81 3.36
977 2825 0.109913 AGTTCCTGTTTCCCCGTTCC 59.890 55.000 0.00 0.00 0.00 3.62
978 2826 1.071814 TTCCTGTTTCCCCGTTCCG 59.928 57.895 0.00 0.00 0.00 4.30
979 2827 1.698067 TTCCTGTTTCCCCGTTCCGT 61.698 55.000 0.00 0.00 0.00 4.69
980 2828 1.228033 CCTGTTTCCCCGTTCCGTT 60.228 57.895 0.00 0.00 0.00 4.44
981 2829 1.232621 CCTGTTTCCCCGTTCCGTTC 61.233 60.000 0.00 0.00 0.00 3.95
990 2838 0.169672 CCGTTCCGTTCGAGCTTAGA 59.830 55.000 0.00 0.00 0.00 2.10
994 2842 2.398252 TCCGTTCGAGCTTAGAGAGA 57.602 50.000 0.00 0.00 0.00 3.10
999 2847 3.486209 CGTTCGAGCTTAGAGAGAAGGAC 60.486 52.174 0.00 0.00 0.00 3.85
1298 3187 4.178540 GCTTGTACTGCTACGGTTGATAA 58.821 43.478 0.00 0.00 0.00 1.75
1299 3188 4.809426 GCTTGTACTGCTACGGTTGATAAT 59.191 41.667 0.00 0.00 0.00 1.28
1300 3189 5.981315 GCTTGTACTGCTACGGTTGATAATA 59.019 40.000 0.00 0.00 0.00 0.98
1301 3190 6.477688 GCTTGTACTGCTACGGTTGATAATAA 59.522 38.462 0.00 0.00 0.00 1.40
1302 3191 7.170998 GCTTGTACTGCTACGGTTGATAATAAT 59.829 37.037 0.00 0.00 0.00 1.28
1303 3192 7.940178 TGTACTGCTACGGTTGATAATAATG 57.060 36.000 0.00 0.00 0.00 1.90
1304 3193 7.494211 TGTACTGCTACGGTTGATAATAATGT 58.506 34.615 0.00 0.00 0.00 2.71
1362 3521 8.600449 TTTATGTGATTTTGTTTGGATCCAAC 57.400 30.769 27.04 20.43 35.46 3.77
1515 3737 6.559921 AGTTTAAAGTCCCCTTAGTTCCAGTA 59.440 38.462 0.00 0.00 0.00 2.74
1516 3738 4.904895 AAAGTCCCCTTAGTTCCAGTAC 57.095 45.455 0.00 0.00 0.00 2.73
1526 3748 5.582665 CCTTAGTTCCAGTACAAGATTCTGC 59.417 44.000 0.00 0.00 0.00 4.26
1655 4222 0.539438 GGGCAGGACAACATTGTGGA 60.539 55.000 1.07 0.00 42.43 4.02
1693 4463 3.761218 TGTTTGGAGCTTGTCAAAACTCA 59.239 39.130 14.20 4.90 46.01 3.41
1722 4492 4.746115 TGCTCTGCTTATTTGCTTTTTGTG 59.254 37.500 0.00 0.00 0.00 3.33
1760 4531 1.512926 ATTTGAGCGCAAGTCGAACT 58.487 45.000 11.47 0.00 41.67 3.01
1764 4535 0.111089 GAGCGCAAGTCGAACTGTTG 60.111 55.000 11.47 0.00 41.67 3.33
2019 4790 1.237285 GCACCACCATCAAGAACGCT 61.237 55.000 0.00 0.00 0.00 5.07
2085 4856 3.327404 AAGGACGCCGGGGTCATT 61.327 61.111 41.44 39.03 38.70 2.57
2187 4958 2.022129 CGGCGAGAAGAACGTGCTT 61.022 57.895 9.04 9.04 0.00 3.91
2433 5205 4.675029 ACCCTTTCGTCCACCGCG 62.675 66.667 0.00 0.00 36.19 6.46
2544 5316 0.327924 TGTTCCGGAAGTGCATGGAT 59.672 50.000 19.50 0.00 0.00 3.41
2662 5434 0.321475 GCTGCTGCAGGACTTCTTCT 60.321 55.000 29.05 0.00 39.41 2.85
3027 5800 2.717044 CGTGCCCCAGATCACCGTA 61.717 63.158 0.00 0.00 0.00 4.02
3911 6790 1.657556 GCCGCAAACCTTTGTAGCA 59.342 52.632 8.44 0.00 40.24 3.49
4004 6883 4.161295 CCCGGCGCTCTCCATGAA 62.161 66.667 7.64 0.00 0.00 2.57
4063 6948 5.475719 TGTACCAGTAGCTATGTGTTTGAC 58.524 41.667 0.00 0.00 0.00 3.18
4069 6959 3.618690 AGCTATGTGTTTGACCTCTCC 57.381 47.619 0.00 0.00 0.00 3.71
4077 6969 2.158310 TGTTTGACCTCTCCCTCTCTCA 60.158 50.000 0.00 0.00 0.00 3.27
4114 7006 1.209128 GCACGATCTTGATGTACCGG 58.791 55.000 0.00 0.00 0.00 5.28
4154 7046 5.044919 AGTTGGATCATATGGTGTTTCTCCA 60.045 40.000 2.13 0.00 39.41 3.86
4168 7061 4.236147 GTTTCTCCACCTCTACGTTCTTC 58.764 47.826 0.00 0.00 0.00 2.87
4257 7150 4.816392 ACACTTGATGTATGTCTTGCGTA 58.184 39.130 0.00 0.00 40.88 4.42
4325 7218 0.663153 GTTTTGGCACTCAACTCGCT 59.337 50.000 0.00 0.00 34.67 4.93
4331 7224 1.674221 GGCACTCAACTCGCTGATTCT 60.674 52.381 0.00 0.00 0.00 2.40
4346 7239 3.849911 TGATTCTCGAGGTGACATTGAC 58.150 45.455 13.56 0.00 0.00 3.18
4427 7320 2.155279 GGGCACTCTTTGAGGTTCTTC 58.845 52.381 0.00 0.00 33.35 2.87
4435 7328 1.961793 TTGAGGTTCTTCGTGTTGGG 58.038 50.000 0.00 0.00 0.00 4.12
4490 7383 5.475719 CATATCGTATAATTGACCCACGGT 58.524 41.667 0.00 0.00 39.44 4.83
4522 7415 5.305644 GGTGACATTGGAGTATCTAGGTGAT 59.694 44.000 0.00 0.00 39.11 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.831343 GGCGCTGCATTAACAAGATG 58.169 50.000 7.64 0.00 0.00 2.90
3 4 1.226379 CCGGCGCTGCATTAACAAG 60.226 57.895 11.81 0.00 0.00 3.16
6 7 1.009675 CATCCGGCGCTGCATTAAC 60.010 57.895 11.81 0.00 0.00 2.01
8 9 0.179070 TTACATCCGGCGCTGCATTA 60.179 50.000 11.81 0.00 0.00 1.90
11 12 1.451207 AATTACATCCGGCGCTGCA 60.451 52.632 11.81 0.00 0.00 4.41
12 13 1.009675 CAATTACATCCGGCGCTGC 60.010 57.895 11.81 0.00 0.00 5.25
13 14 1.229428 ATCAATTACATCCGGCGCTG 58.771 50.000 9.96 9.96 0.00 5.18
14 15 2.831685 TATCAATTACATCCGGCGCT 57.168 45.000 7.64 0.00 0.00 5.92
15 16 3.262420 AGATATCAATTACATCCGGCGC 58.738 45.455 0.00 0.00 0.00 6.53
17 18 5.978814 AGGTAGATATCAATTACATCCGGC 58.021 41.667 5.32 0.00 0.00 6.13
65 66 5.245075 TGAACCCACACAACTTCTTCTTTTT 59.755 36.000 0.00 0.00 0.00 1.94
68 69 3.963129 TGAACCCACACAACTTCTTCTT 58.037 40.909 0.00 0.00 0.00 2.52
69 70 3.644966 TGAACCCACACAACTTCTTCT 57.355 42.857 0.00 0.00 0.00 2.85
70 71 4.499696 CCAATGAACCCACACAACTTCTTC 60.500 45.833 0.00 0.00 0.00 2.87
73 74 2.035832 CCCAATGAACCCACACAACTTC 59.964 50.000 0.00 0.00 0.00 3.01
76 77 1.339929 GACCCAATGAACCCACACAAC 59.660 52.381 0.00 0.00 0.00 3.32
77 78 1.216678 AGACCCAATGAACCCACACAA 59.783 47.619 0.00 0.00 0.00 3.33
78 79 0.850100 AGACCCAATGAACCCACACA 59.150 50.000 0.00 0.00 0.00 3.72
79 80 2.039879 ACTAGACCCAATGAACCCACAC 59.960 50.000 0.00 0.00 0.00 3.82
80 81 2.344592 ACTAGACCCAATGAACCCACA 58.655 47.619 0.00 0.00 0.00 4.17
82 83 2.983192 TCAACTAGACCCAATGAACCCA 59.017 45.455 0.00 0.00 0.00 4.51
84 85 4.455877 CACTTCAACTAGACCCAATGAACC 59.544 45.833 0.00 0.00 0.00 3.62
86 87 5.304686 ACACTTCAACTAGACCCAATGAA 57.695 39.130 0.00 0.00 0.00 2.57
87 88 4.974645 ACACTTCAACTAGACCCAATGA 57.025 40.909 0.00 0.00 0.00 2.57
89 90 5.445964 ACAAACACTTCAACTAGACCCAAT 58.554 37.500 0.00 0.00 0.00 3.16
92 93 5.123936 AGAACAAACACTTCAACTAGACCC 58.876 41.667 0.00 0.00 0.00 4.46
93 94 5.815740 TGAGAACAAACACTTCAACTAGACC 59.184 40.000 0.00 0.00 0.00 3.85
95 96 6.535150 CACTGAGAACAAACACTTCAACTAGA 59.465 38.462 0.00 0.00 0.00 2.43
97 98 5.584649 CCACTGAGAACAAACACTTCAACTA 59.415 40.000 0.00 0.00 0.00 2.24
98 99 4.396166 CCACTGAGAACAAACACTTCAACT 59.604 41.667 0.00 0.00 0.00 3.16
99 100 4.662145 CCACTGAGAACAAACACTTCAAC 58.338 43.478 0.00 0.00 0.00 3.18
100 101 3.128589 GCCACTGAGAACAAACACTTCAA 59.871 43.478 0.00 0.00 0.00 2.69
103 104 1.670811 CGCCACTGAGAACAAACACTT 59.329 47.619 0.00 0.00 0.00 3.16
104 105 1.299541 CGCCACTGAGAACAAACACT 58.700 50.000 0.00 0.00 0.00 3.55
106 107 1.295792 GACGCCACTGAGAACAAACA 58.704 50.000 0.00 0.00 0.00 2.83
107 108 0.232303 CGACGCCACTGAGAACAAAC 59.768 55.000 0.00 0.00 0.00 2.93
108 109 1.495584 GCGACGCCACTGAGAACAAA 61.496 55.000 9.14 0.00 0.00 2.83
109 110 1.954146 GCGACGCCACTGAGAACAA 60.954 57.895 9.14 0.00 0.00 2.83
110 111 1.520600 TAGCGACGCCACTGAGAACA 61.521 55.000 17.79 0.00 0.00 3.18
113 114 1.433471 CATAGCGACGCCACTGAGA 59.567 57.895 17.79 0.00 0.00 3.27
114 115 2.233654 GCATAGCGACGCCACTGAG 61.234 63.158 17.79 2.07 0.00 3.35
115 116 2.202743 GCATAGCGACGCCACTGA 60.203 61.111 17.79 0.00 0.00 3.41
117 118 1.884464 CATGCATAGCGACGCCACT 60.884 57.895 17.79 0.00 0.00 4.00
118 119 2.628106 CATGCATAGCGACGCCAC 59.372 61.111 17.79 4.06 0.00 5.01
120 121 4.017877 GCCATGCATAGCGACGCC 62.018 66.667 17.79 0.92 0.00 5.68
121 122 1.221466 TTAGCCATGCATAGCGACGC 61.221 55.000 13.03 13.03 0.00 5.19
123 124 5.352284 AGTATATTAGCCATGCATAGCGAC 58.648 41.667 11.52 4.73 0.00 5.19
124 125 5.451937 GGAGTATATTAGCCATGCATAGCGA 60.452 44.000 11.52 3.41 0.00 4.93
125 126 4.747108 GGAGTATATTAGCCATGCATAGCG 59.253 45.833 11.52 0.00 0.00 4.26
126 127 5.059833 GGGAGTATATTAGCCATGCATAGC 58.940 45.833 9.27 9.27 0.00 2.97
127 128 5.455326 GGGGGAGTATATTAGCCATGCATAG 60.455 48.000 0.00 0.00 0.00 2.23
128 129 4.412199 GGGGGAGTATATTAGCCATGCATA 59.588 45.833 0.00 0.00 0.00 3.14
129 130 3.203040 GGGGGAGTATATTAGCCATGCAT 59.797 47.826 0.00 0.00 0.00 3.96
130 131 2.576191 GGGGGAGTATATTAGCCATGCA 59.424 50.000 0.00 0.00 0.00 3.96
132 133 2.170607 CCGGGGGAGTATATTAGCCATG 59.829 54.545 0.00 0.00 0.00 3.66
133 134 2.225805 ACCGGGGGAGTATATTAGCCAT 60.226 50.000 6.32 0.00 0.00 4.40
135 136 1.948391 ACCGGGGGAGTATATTAGCC 58.052 55.000 6.32 0.00 0.00 3.93
136 137 3.171528 AGAACCGGGGGAGTATATTAGC 58.828 50.000 6.32 0.00 0.00 3.09
137 138 8.779096 ATTATAGAACCGGGGGAGTATATTAG 57.221 38.462 6.32 0.00 0.00 1.73
139 140 8.458951 AAATTATAGAACCGGGGGAGTATATT 57.541 34.615 6.32 0.00 0.00 1.28
142 143 6.102174 ACAAAATTATAGAACCGGGGGAGTAT 59.898 38.462 6.32 0.00 0.00 2.12
143 144 5.429435 ACAAAATTATAGAACCGGGGGAGTA 59.571 40.000 6.32 0.00 0.00 2.59
144 145 4.228895 ACAAAATTATAGAACCGGGGGAGT 59.771 41.667 6.32 0.00 0.00 3.85
145 146 4.788679 ACAAAATTATAGAACCGGGGGAG 58.211 43.478 6.32 0.00 0.00 4.30
146 147 4.866327 ACAAAATTATAGAACCGGGGGA 57.134 40.909 6.32 0.00 0.00 4.81
147 148 5.925506 AAACAAAATTATAGAACCGGGGG 57.074 39.130 6.32 0.00 0.00 5.40
148 149 6.095720 TGCTAAACAAAATTATAGAACCGGGG 59.904 38.462 6.32 0.00 0.00 5.73
150 151 9.233232 GATTGCTAAACAAAATTATAGAACCGG 57.767 33.333 0.00 0.00 42.86 5.28
155 156 9.693739 TCCTGGATTGCTAAACAAAATTATAGA 57.306 29.630 0.00 0.00 42.86 1.98
160 161 9.657419 CTAATTCCTGGATTGCTAAACAAAATT 57.343 29.630 0.00 0.00 42.86 1.82
162 163 8.415950 TCTAATTCCTGGATTGCTAAACAAAA 57.584 30.769 0.00 0.00 42.86 2.44
163 164 8.415950 TTCTAATTCCTGGATTGCTAAACAAA 57.584 30.769 0.00 0.00 42.86 2.83
164 165 8.303876 GTTTCTAATTCCTGGATTGCTAAACAA 58.696 33.333 0.00 0.00 44.01 2.83
165 166 7.450014 TGTTTCTAATTCCTGGATTGCTAAACA 59.550 33.333 16.57 16.57 31.44 2.83
167 168 8.469200 CATGTTTCTAATTCCTGGATTGCTAAA 58.531 33.333 0.00 0.00 0.00 1.85
168 169 7.615365 ACATGTTTCTAATTCCTGGATTGCTAA 59.385 33.333 0.00 0.00 0.00 3.09
169 170 7.118723 ACATGTTTCTAATTCCTGGATTGCTA 58.881 34.615 0.00 0.00 0.00 3.49
170 171 5.954150 ACATGTTTCTAATTCCTGGATTGCT 59.046 36.000 0.00 0.00 0.00 3.91
171 172 6.212888 ACATGTTTCTAATTCCTGGATTGC 57.787 37.500 0.00 0.00 0.00 3.56
172 173 8.279970 TGTACATGTTTCTAATTCCTGGATTG 57.720 34.615 2.30 0.00 0.00 2.67
173 174 9.125026 GATGTACATGTTTCTAATTCCTGGATT 57.875 33.333 14.43 0.00 0.00 3.01
174 175 7.442364 CGATGTACATGTTTCTAATTCCTGGAT 59.558 37.037 14.43 0.00 0.00 3.41
175 176 6.761242 CGATGTACATGTTTCTAATTCCTGGA 59.239 38.462 14.43 0.00 0.00 3.86
176 177 6.761242 TCGATGTACATGTTTCTAATTCCTGG 59.239 38.462 14.43 0.00 0.00 4.45
178 179 8.786826 TTTCGATGTACATGTTTCTAATTCCT 57.213 30.769 14.43 0.00 0.00 3.36
191 192 7.929159 TGAATGCATGTATTTTCGATGTACAT 58.071 30.769 8.43 8.43 39.05 2.29
192 193 7.313951 TGAATGCATGTATTTTCGATGTACA 57.686 32.000 10.53 0.00 33.35 2.90
198 199 9.061435 TGGTTATATGAATGCATGTATTTTCGA 57.939 29.630 10.53 0.00 35.94 3.71
200 201 9.410556 GGTGGTTATATGAATGCATGTATTTTC 57.589 33.333 10.53 0.48 35.94 2.29
202 203 8.710749 AGGTGGTTATATGAATGCATGTATTT 57.289 30.769 10.53 0.00 35.94 1.40
203 204 8.710749 AAGGTGGTTATATGAATGCATGTATT 57.289 30.769 8.93 8.93 35.94 1.89
205 206 7.998383 AGAAAGGTGGTTATATGAATGCATGTA 59.002 33.333 0.00 0.00 35.94 2.29
206 207 6.835488 AGAAAGGTGGTTATATGAATGCATGT 59.165 34.615 0.00 0.00 35.94 3.21
207 208 7.281040 AGAAAGGTGGTTATATGAATGCATG 57.719 36.000 0.00 0.00 35.94 4.06
217 218 9.983024 TCCATGAAAAATAGAAAGGTGGTTATA 57.017 29.630 0.00 0.00 0.00 0.98
218 219 8.893563 TCCATGAAAAATAGAAAGGTGGTTAT 57.106 30.769 0.00 0.00 0.00 1.89
219 220 8.713708 TTCCATGAAAAATAGAAAGGTGGTTA 57.286 30.769 0.00 0.00 0.00 2.85
220 221 7.610580 TTCCATGAAAAATAGAAAGGTGGTT 57.389 32.000 0.00 0.00 0.00 3.67
221 222 7.610580 TTTCCATGAAAAATAGAAAGGTGGT 57.389 32.000 0.00 0.00 0.00 4.16
222 223 8.096414 ACATTTCCATGAAAAATAGAAAGGTGG 58.904 33.333 7.52 0.00 39.25 4.61
235 236 9.619316 CGTTCAATACTTAACATTTCCATGAAA 57.381 29.630 0.00 0.00 35.94 2.69
236 237 8.788806 ACGTTCAATACTTAACATTTCCATGAA 58.211 29.630 0.00 0.00 34.11 2.57
238 239 8.964420 AACGTTCAATACTTAACATTTCCATG 57.036 30.769 0.00 0.00 36.34 3.66
239 240 9.405587 CAAACGTTCAATACTTAACATTTCCAT 57.594 29.630 0.00 0.00 0.00 3.41
241 242 7.863877 ACCAAACGTTCAATACTTAACATTTCC 59.136 33.333 0.00 0.00 0.00 3.13
242 243 8.791355 ACCAAACGTTCAATACTTAACATTTC 57.209 30.769 0.00 0.00 0.00 2.17
243 244 9.667989 GTACCAAACGTTCAATACTTAACATTT 57.332 29.630 0.00 0.00 0.00 2.32
244 245 8.011106 CGTACCAAACGTTCAATACTTAACATT 58.989 33.333 0.00 0.00 46.72 2.71
261 262 2.139917 TGTCATGTGCTCGTACCAAAC 58.860 47.619 0.00 0.00 0.00 2.93
263 264 2.412870 CTTGTCATGTGCTCGTACCAA 58.587 47.619 0.00 0.00 0.00 3.67
265 266 0.721718 GCTTGTCATGTGCTCGTACC 59.278 55.000 0.00 0.00 0.00 3.34
266 267 1.428448 TGCTTGTCATGTGCTCGTAC 58.572 50.000 0.00 0.00 0.00 3.67
267 268 2.162319 TTGCTTGTCATGTGCTCGTA 57.838 45.000 0.00 0.00 0.00 3.43
268 269 1.002468 GTTTGCTTGTCATGTGCTCGT 60.002 47.619 0.00 0.00 0.00 4.18
269 270 1.678360 GTTTGCTTGTCATGTGCTCG 58.322 50.000 0.00 0.00 0.00 5.03
274 275 4.489810 TGAAAAACGTTTGCTTGTCATGT 58.510 34.783 15.46 0.00 0.00 3.21
275 276 5.231779 TCATGAAAAACGTTTGCTTGTCATG 59.768 36.000 26.25 26.25 34.37 3.07
276 277 5.231991 GTCATGAAAAACGTTTGCTTGTCAT 59.768 36.000 15.46 14.47 0.00 3.06
277 278 4.560819 GTCATGAAAAACGTTTGCTTGTCA 59.439 37.500 15.46 12.95 0.00 3.58
278 279 4.560819 TGTCATGAAAAACGTTTGCTTGTC 59.439 37.500 15.46 14.58 0.00 3.18
279 280 4.326009 GTGTCATGAAAAACGTTTGCTTGT 59.674 37.500 15.46 0.00 0.00 3.16
280 281 4.259770 GGTGTCATGAAAAACGTTTGCTTG 60.260 41.667 15.46 16.47 0.00 4.01
281 282 3.862845 GGTGTCATGAAAAACGTTTGCTT 59.137 39.130 15.46 5.94 0.00 3.91
282 283 3.130340 AGGTGTCATGAAAAACGTTTGCT 59.870 39.130 15.46 4.85 0.00 3.91
283 284 3.443976 AGGTGTCATGAAAAACGTTTGC 58.556 40.909 15.46 10.54 0.00 3.68
284 285 6.750039 ACTAAAGGTGTCATGAAAAACGTTTG 59.250 34.615 15.46 14.37 33.90 2.93
286 287 6.445357 ACTAAAGGTGTCATGAAAAACGTT 57.555 33.333 0.00 0.00 0.00 3.99
287 288 6.094325 TCAACTAAAGGTGTCATGAAAAACGT 59.906 34.615 0.00 0.00 0.00 3.99
288 289 6.413818 GTCAACTAAAGGTGTCATGAAAAACG 59.586 38.462 0.00 0.00 0.00 3.60
290 291 6.316640 TCGTCAACTAAAGGTGTCATGAAAAA 59.683 34.615 0.00 0.00 0.00 1.94
291 292 5.818336 TCGTCAACTAAAGGTGTCATGAAAA 59.182 36.000 0.00 0.00 0.00 2.29
293 294 4.951254 TCGTCAACTAAAGGTGTCATGAA 58.049 39.130 0.00 0.00 0.00 2.57
294 295 4.556233 CTCGTCAACTAAAGGTGTCATGA 58.444 43.478 0.00 0.00 0.00 3.07
295 296 3.679980 CCTCGTCAACTAAAGGTGTCATG 59.320 47.826 0.00 0.00 0.00 3.07
299 300 1.346722 CCCCTCGTCAACTAAAGGTGT 59.653 52.381 0.00 0.00 0.00 4.16
300 301 1.621814 TCCCCTCGTCAACTAAAGGTG 59.378 52.381 0.00 0.00 0.00 4.00
301 302 2.019807 TCCCCTCGTCAACTAAAGGT 57.980 50.000 0.00 0.00 0.00 3.50
302 303 2.420129 CCATCCCCTCGTCAACTAAAGG 60.420 54.545 0.00 0.00 0.00 3.11
303 304 2.906354 CCATCCCCTCGTCAACTAAAG 58.094 52.381 0.00 0.00 0.00 1.85
305 306 0.539986 GCCATCCCCTCGTCAACTAA 59.460 55.000 0.00 0.00 0.00 2.24
307 308 1.488705 TTGCCATCCCCTCGTCAACT 61.489 55.000 0.00 0.00 0.00 3.16
308 309 1.002624 TTGCCATCCCCTCGTCAAC 60.003 57.895 0.00 0.00 0.00 3.18
309 310 1.299648 CTTGCCATCCCCTCGTCAA 59.700 57.895 0.00 0.00 0.00 3.18
310 311 1.488705 AACTTGCCATCCCCTCGTCA 61.489 55.000 0.00 0.00 0.00 4.35
311 312 0.539986 TAACTTGCCATCCCCTCGTC 59.460 55.000 0.00 0.00 0.00 4.20
312 313 0.541863 CTAACTTGCCATCCCCTCGT 59.458 55.000 0.00 0.00 0.00 4.18
314 315 0.183731 CCCTAACTTGCCATCCCCTC 59.816 60.000 0.00 0.00 0.00 4.30
316 317 1.230212 CCCCTAACTTGCCATCCCC 59.770 63.158 0.00 0.00 0.00 4.81
317 318 1.455773 GCCCCTAACTTGCCATCCC 60.456 63.158 0.00 0.00 0.00 3.85
318 319 0.324275 TTGCCCCTAACTTGCCATCC 60.324 55.000 0.00 0.00 0.00 3.51
319 320 1.106285 CTTGCCCCTAACTTGCCATC 58.894 55.000 0.00 0.00 0.00 3.51
320 321 0.972471 GCTTGCCCCTAACTTGCCAT 60.972 55.000 0.00 0.00 0.00 4.40
322 323 1.606313 TGCTTGCCCCTAACTTGCC 60.606 57.895 0.00 0.00 0.00 4.52
323 324 1.178534 TGTGCTTGCCCCTAACTTGC 61.179 55.000 0.00 0.00 0.00 4.01
324 325 1.474077 GATGTGCTTGCCCCTAACTTG 59.526 52.381 0.00 0.00 0.00 3.16
325 326 1.075374 TGATGTGCTTGCCCCTAACTT 59.925 47.619 0.00 0.00 0.00 2.66
327 328 1.544724 TTGATGTGCTTGCCCCTAAC 58.455 50.000 0.00 0.00 0.00 2.34
328 329 2.530460 ATTGATGTGCTTGCCCCTAA 57.470 45.000 0.00 0.00 0.00 2.69
329 330 2.530460 AATTGATGTGCTTGCCCCTA 57.470 45.000 0.00 0.00 0.00 3.53
331 332 2.477845 AAAATTGATGTGCTTGCCCC 57.522 45.000 0.00 0.00 0.00 5.80
359 360 9.659830 GACAACTTTCGTACTTCATGTTTATTT 57.340 29.630 0.00 0.00 0.00 1.40
361 362 8.373048 TGACAACTTTCGTACTTCATGTTTAT 57.627 30.769 0.00 0.00 0.00 1.40
362 363 7.773864 TGACAACTTTCGTACTTCATGTTTA 57.226 32.000 0.00 0.00 0.00 2.01
363 364 6.671614 TGACAACTTTCGTACTTCATGTTT 57.328 33.333 0.00 0.00 0.00 2.83
364 365 6.658831 CATGACAACTTTCGTACTTCATGTT 58.341 36.000 0.00 0.00 0.00 2.71
366 367 5.082059 GCATGACAACTTTCGTACTTCATG 58.918 41.667 0.00 0.00 36.50 3.07
367 368 4.997395 AGCATGACAACTTTCGTACTTCAT 59.003 37.500 0.00 0.00 0.00 2.57
368 369 4.377021 AGCATGACAACTTTCGTACTTCA 58.623 39.130 0.00 0.00 0.00 3.02
369 370 4.992381 AGCATGACAACTTTCGTACTTC 57.008 40.909 0.00 0.00 0.00 3.01
371 372 3.498397 CCAAGCATGACAACTTTCGTACT 59.502 43.478 0.00 0.00 0.00 2.73
372 373 3.810373 CCAAGCATGACAACTTTCGTAC 58.190 45.455 0.00 0.00 0.00 3.67
373 374 2.225491 GCCAAGCATGACAACTTTCGTA 59.775 45.455 0.00 0.00 0.00 3.43
374 375 1.001378 GCCAAGCATGACAACTTTCGT 60.001 47.619 0.00 0.00 0.00 3.85
375 376 1.001487 TGCCAAGCATGACAACTTTCG 60.001 47.619 0.00 0.00 31.71 3.46
376 377 2.796593 GTTGCCAAGCATGACAACTTTC 59.203 45.455 12.97 0.00 43.92 2.62
377 378 2.825205 GTTGCCAAGCATGACAACTTT 58.175 42.857 12.97 0.00 43.92 2.66
378 379 2.514205 GTTGCCAAGCATGACAACTT 57.486 45.000 12.97 0.00 43.92 2.66
381 382 3.636300 ACTTTAGTTGCCAAGCATGACAA 59.364 39.130 0.00 0.00 38.76 3.18
382 383 3.221771 ACTTTAGTTGCCAAGCATGACA 58.778 40.909 0.00 0.00 38.76 3.58
383 384 3.923017 ACTTTAGTTGCCAAGCATGAC 57.077 42.857 0.00 0.00 38.76 3.06
395 396 6.812160 GTGATACGAGGATGACAACTTTAGTT 59.188 38.462 0.00 0.00 39.12 2.24
396 397 6.153000 AGTGATACGAGGATGACAACTTTAGT 59.847 38.462 0.00 0.00 0.00 2.24
397 398 6.565234 AGTGATACGAGGATGACAACTTTAG 58.435 40.000 0.00 0.00 0.00 1.85
399 400 5.407407 AGTGATACGAGGATGACAACTTT 57.593 39.130 0.00 0.00 0.00 2.66
400 401 6.525578 TTAGTGATACGAGGATGACAACTT 57.474 37.500 0.00 0.00 0.00 2.66
402 403 6.331061 AGTTTAGTGATACGAGGATGACAAC 58.669 40.000 0.00 0.00 0.00 3.32
403 404 6.525578 AGTTTAGTGATACGAGGATGACAA 57.474 37.500 0.00 0.00 0.00 3.18
405 406 5.232414 GCAAGTTTAGTGATACGAGGATGAC 59.768 44.000 0.00 0.00 0.00 3.06
407 408 4.508124 GGCAAGTTTAGTGATACGAGGATG 59.492 45.833 0.00 0.00 0.00 3.51
408 409 4.161565 TGGCAAGTTTAGTGATACGAGGAT 59.838 41.667 0.00 0.00 0.00 3.24
409 410 3.512329 TGGCAAGTTTAGTGATACGAGGA 59.488 43.478 0.00 0.00 0.00 3.71
410 411 3.857052 TGGCAAGTTTAGTGATACGAGG 58.143 45.455 0.00 0.00 0.00 4.63
411 412 7.534085 TTTATGGCAAGTTTAGTGATACGAG 57.466 36.000 0.00 0.00 0.00 4.18
412 413 7.908827 TTTTATGGCAAGTTTAGTGATACGA 57.091 32.000 0.00 0.00 0.00 3.43
444 445 3.126343 CGGTAAAAGTACATGGCAACTCC 59.874 47.826 0.00 0.00 31.67 3.85
447 448 4.752661 TTCGGTAAAAGTACATGGCAAC 57.247 40.909 0.00 0.00 31.21 4.17
449 450 4.328536 ACATTCGGTAAAAGTACATGGCA 58.671 39.130 0.00 0.00 31.21 4.92
450 451 4.957759 ACATTCGGTAAAAGTACATGGC 57.042 40.909 0.00 0.00 31.21 4.40
452 453 9.485591 GTATCAAACATTCGGTAAAAGTACATG 57.514 33.333 0.00 0.00 31.21 3.21
453 454 9.444600 AGTATCAAACATTCGGTAAAAGTACAT 57.555 29.630 0.00 0.00 31.21 2.29
454 455 8.836268 AGTATCAAACATTCGGTAAAAGTACA 57.164 30.769 0.00 0.00 31.21 2.90
463 464 8.964476 AATCTGATAAGTATCAAACATTCGGT 57.036 30.769 2.79 0.00 41.72 4.69
464 465 8.499162 GGAATCTGATAAGTATCAAACATTCGG 58.501 37.037 2.79 0.00 41.72 4.30
465 466 9.045223 TGGAATCTGATAAGTATCAAACATTCG 57.955 33.333 2.79 0.00 41.72 3.34
477 478 7.017551 TGGGTAGCATATTGGAATCTGATAAGT 59.982 37.037 0.00 0.00 0.00 2.24
478 479 7.397221 TGGGTAGCATATTGGAATCTGATAAG 58.603 38.462 0.00 0.00 0.00 1.73
479 480 7.328404 TGGGTAGCATATTGGAATCTGATAA 57.672 36.000 0.00 0.00 0.00 1.75
481 482 5.848286 TGGGTAGCATATTGGAATCTGAT 57.152 39.130 0.00 0.00 0.00 2.90
482 483 5.645056 TTGGGTAGCATATTGGAATCTGA 57.355 39.130 0.00 0.00 0.00 3.27
483 484 6.239120 CCTTTTGGGTAGCATATTGGAATCTG 60.239 42.308 0.00 0.00 35.46 2.90
484 485 5.835280 CCTTTTGGGTAGCATATTGGAATCT 59.165 40.000 0.00 0.00 35.46 2.40
485 486 5.833131 TCCTTTTGGGTAGCATATTGGAATC 59.167 40.000 0.00 0.00 40.87 2.52
486 487 5.776358 TCCTTTTGGGTAGCATATTGGAAT 58.224 37.500 0.00 0.00 40.87 3.01
487 488 5.044476 TCTCCTTTTGGGTAGCATATTGGAA 60.044 40.000 0.00 0.00 40.87 3.53
488 489 4.476846 TCTCCTTTTGGGTAGCATATTGGA 59.523 41.667 0.00 0.00 40.87 3.53
489 490 4.792068 TCTCCTTTTGGGTAGCATATTGG 58.208 43.478 0.00 0.00 40.87 3.16
490 491 5.221126 GCTTCTCCTTTTGGGTAGCATATTG 60.221 44.000 0.00 0.00 40.87 1.90
491 492 4.889995 GCTTCTCCTTTTGGGTAGCATATT 59.110 41.667 0.00 0.00 40.87 1.28
492 493 4.079787 TGCTTCTCCTTTTGGGTAGCATAT 60.080 41.667 0.00 0.00 38.79 1.78
493 494 3.265737 TGCTTCTCCTTTTGGGTAGCATA 59.734 43.478 0.00 0.00 38.79 3.14
495 496 1.423541 TGCTTCTCCTTTTGGGTAGCA 59.576 47.619 0.00 0.00 40.11 3.49
496 497 2.200373 TGCTTCTCCTTTTGGGTAGC 57.800 50.000 0.00 0.00 40.87 3.58
497 498 5.529581 TTTTTGCTTCTCCTTTTGGGTAG 57.470 39.130 0.00 0.00 40.87 3.18
516 517 6.985645 TCTTGCTTTTCACTGCATATGTTTTT 59.014 30.769 4.29 0.00 39.07 1.94
517 518 6.514947 TCTTGCTTTTCACTGCATATGTTTT 58.485 32.000 4.29 0.00 39.07 2.43
518 519 6.088016 TCTTGCTTTTCACTGCATATGTTT 57.912 33.333 4.29 0.00 39.07 2.83
519 520 5.710513 TCTTGCTTTTCACTGCATATGTT 57.289 34.783 4.29 0.00 39.07 2.71
520 521 5.416639 TCATCTTGCTTTTCACTGCATATGT 59.583 36.000 4.29 0.00 39.07 2.29
521 522 5.886992 TCATCTTGCTTTTCACTGCATATG 58.113 37.500 0.00 0.00 39.07 1.78
522 523 5.651139 ACTCATCTTGCTTTTCACTGCATAT 59.349 36.000 0.00 0.00 39.07 1.78
523 524 5.005740 ACTCATCTTGCTTTTCACTGCATA 58.994 37.500 0.00 0.00 39.07 3.14
524 525 3.825014 ACTCATCTTGCTTTTCACTGCAT 59.175 39.130 0.00 0.00 39.07 3.96
525 526 3.216800 ACTCATCTTGCTTTTCACTGCA 58.783 40.909 0.00 0.00 37.42 4.41
526 527 3.911661 ACTCATCTTGCTTTTCACTGC 57.088 42.857 0.00 0.00 0.00 4.40
527 528 5.824429 TGAAACTCATCTTGCTTTTCACTG 58.176 37.500 0.00 0.00 32.57 3.66
528 529 6.645790 ATGAAACTCATCTTGCTTTTCACT 57.354 33.333 0.00 0.00 38.60 3.41
531 532 7.699812 GGTCATATGAAACTCATCTTGCTTTTC 59.300 37.037 7.07 0.00 38.26 2.29
532 533 7.177216 TGGTCATATGAAACTCATCTTGCTTTT 59.823 33.333 7.07 0.00 38.26 2.27
533 534 6.660521 TGGTCATATGAAACTCATCTTGCTTT 59.339 34.615 7.07 0.00 38.26 3.51
534 535 6.094603 GTGGTCATATGAAACTCATCTTGCTT 59.905 38.462 7.07 0.00 38.26 3.91
535 536 5.587844 GTGGTCATATGAAACTCATCTTGCT 59.412 40.000 7.07 0.00 38.26 3.91
536 537 5.355071 TGTGGTCATATGAAACTCATCTTGC 59.645 40.000 7.07 0.00 38.26 4.01
538 539 6.950842 TCTGTGGTCATATGAAACTCATCTT 58.049 36.000 7.07 0.00 38.26 2.40
539 540 6.550938 TCTGTGGTCATATGAAACTCATCT 57.449 37.500 7.07 0.00 38.26 2.90
540 541 7.798596 AATCTGTGGTCATATGAAACTCATC 57.201 36.000 7.07 0.00 38.26 2.92
541 542 7.011763 CGAAATCTGTGGTCATATGAAACTCAT 59.988 37.037 7.07 3.30 40.72 2.90
543 544 6.313905 ACGAAATCTGTGGTCATATGAAACTC 59.686 38.462 7.07 5.51 0.00 3.01
544 545 6.173339 ACGAAATCTGTGGTCATATGAAACT 58.827 36.000 7.07 0.00 0.00 2.66
545 546 6.422776 ACGAAATCTGTGGTCATATGAAAC 57.577 37.500 7.07 9.67 0.00 2.78
547 548 7.447374 AAAACGAAATCTGTGGTCATATGAA 57.553 32.000 7.07 0.00 0.00 2.57
549 550 8.233868 TGTAAAAACGAAATCTGTGGTCATATG 58.766 33.333 0.00 0.00 0.00 1.78
550 551 8.330466 TGTAAAAACGAAATCTGTGGTCATAT 57.670 30.769 0.00 0.00 0.00 1.78
553 554 6.627395 ATGTAAAAACGAAATCTGTGGTCA 57.373 33.333 0.00 0.00 0.00 4.02
556 557 7.062848 GCAAAATGTAAAAACGAAATCTGTGG 58.937 34.615 0.00 0.00 0.00 4.17
557 558 7.616673 TGCAAAATGTAAAAACGAAATCTGTG 58.383 30.769 0.00 0.00 0.00 3.66
558 559 7.763172 TGCAAAATGTAAAAACGAAATCTGT 57.237 28.000 0.00 0.00 0.00 3.41
559 560 9.146270 CTTTGCAAAATGTAAAAACGAAATCTG 57.854 29.630 13.84 0.00 31.86 2.90
560 561 9.092876 TCTTTGCAAAATGTAAAAACGAAATCT 57.907 25.926 13.84 0.00 31.86 2.40
563 564 9.878599 TTTTCTTTGCAAAATGTAAAAACGAAA 57.121 22.222 13.84 11.61 31.86 3.46
565 566 9.483062 CATTTTCTTTGCAAAATGTAAAAACGA 57.517 25.926 13.84 0.00 43.99 3.85
575 576 7.933033 ACCAGTCATACATTTTCTTTGCAAAAT 59.067 29.630 13.84 0.48 36.57 1.82
576 577 7.271511 ACCAGTCATACATTTTCTTTGCAAAA 58.728 30.769 13.84 0.00 0.00 2.44
579 580 5.769662 AGACCAGTCATACATTTTCTTTGCA 59.230 36.000 0.00 0.00 0.00 4.08
580 581 6.259550 AGACCAGTCATACATTTTCTTTGC 57.740 37.500 0.00 0.00 0.00 3.68
581 582 8.322906 TGTAGACCAGTCATACATTTTCTTTG 57.677 34.615 0.00 0.00 0.00 2.77
582 583 8.553459 CTGTAGACCAGTCATACATTTTCTTT 57.447 34.615 0.00 0.00 36.37 2.52
607 608 6.660094 TCGGGTAAAAATATATGGCCCATTAC 59.340 38.462 0.00 0.00 34.52 1.89
627 628 0.848053 TGGGTTTTCTCCTTTCGGGT 59.152 50.000 0.00 0.00 36.25 5.28
628 629 1.534729 CTGGGTTTTCTCCTTTCGGG 58.465 55.000 0.00 0.00 0.00 5.14
629 630 0.881796 GCTGGGTTTTCTCCTTTCGG 59.118 55.000 0.00 0.00 0.00 4.30
631 632 1.257743 GGGCTGGGTTTTCTCCTTTC 58.742 55.000 0.00 0.00 0.00 2.62
635 636 1.606601 GGTGGGCTGGGTTTTCTCC 60.607 63.158 0.00 0.00 0.00 3.71
710 715 1.376037 CCGGTGAGACCAGCCTTTC 60.376 63.158 0.00 0.00 38.47 2.62
739 745 0.320073 CGGTTGGCGTTGTAGAGGAA 60.320 55.000 0.00 0.00 0.00 3.36
772 785 2.435586 CTGTTCTGGAGGCCGCTG 60.436 66.667 6.40 0.00 0.00 5.18
779 792 2.125350 GGGCGCTCTGTTCTGGAG 60.125 66.667 7.64 0.00 0.00 3.86
817 832 4.408596 GGATTTTATTTGGGATGCTGGGAA 59.591 41.667 0.00 0.00 0.00 3.97
849 865 2.388890 CTGATGGATCCAGGGACGGC 62.389 65.000 21.33 3.97 0.00 5.68
850 866 1.050988 ACTGATGGATCCAGGGACGG 61.051 60.000 21.33 16.96 36.03 4.79
851 867 0.833287 AACTGATGGATCCAGGGACG 59.167 55.000 21.33 8.92 36.03 4.79
852 868 1.141858 GGAACTGATGGATCCAGGGAC 59.858 57.143 21.33 11.63 36.03 4.46
853 869 1.274358 TGGAACTGATGGATCCAGGGA 60.274 52.381 21.33 5.29 38.30 4.20
854 870 1.216064 TGGAACTGATGGATCCAGGG 58.784 55.000 21.33 14.23 38.30 4.45
855 871 2.549563 CGATGGAACTGATGGATCCAGG 60.550 54.545 21.33 14.58 45.82 4.45
911 2756 7.713507 CGTAGAACTCTATATAGATCTGAGGGG 59.286 44.444 19.63 7.62 0.00 4.79
923 2768 6.035368 TCGGAGCTACGTAGAACTCTATAT 57.965 41.667 26.53 0.00 34.94 0.86
926 2771 3.808466 TCGGAGCTACGTAGAACTCTA 57.192 47.619 26.53 12.51 34.94 2.43
929 2774 3.242673 CGAAATCGGAGCTACGTAGAACT 60.243 47.826 26.53 14.24 35.37 3.01
930 2775 3.034562 CGAAATCGGAGCTACGTAGAAC 58.965 50.000 26.53 17.00 35.37 3.01
931 2776 2.679837 ACGAAATCGGAGCTACGTAGAA 59.320 45.455 26.53 0.00 44.95 2.10
933 2778 2.287373 AGACGAAATCGGAGCTACGTAG 59.713 50.000 19.83 18.47 44.95 3.51
934 2779 2.283298 AGACGAAATCGGAGCTACGTA 58.717 47.619 19.83 5.51 44.95 3.57
935 2780 1.093159 AGACGAAATCGGAGCTACGT 58.907 50.000 19.83 2.51 44.95 3.57
936 2781 2.110226 GAAGACGAAATCGGAGCTACG 58.890 52.381 13.63 13.63 44.95 3.51
937 2782 2.110226 CGAAGACGAAATCGGAGCTAC 58.890 52.381 7.81 0.00 44.95 3.58
977 2825 2.678836 TCCTTCTCTCTAAGCTCGAACG 59.321 50.000 0.00 0.00 0.00 3.95
978 2826 3.440872 TGTCCTTCTCTCTAAGCTCGAAC 59.559 47.826 0.00 0.00 0.00 3.95
979 2827 3.687125 TGTCCTTCTCTCTAAGCTCGAA 58.313 45.455 0.00 0.00 0.00 3.71
980 2828 3.351794 TGTCCTTCTCTCTAAGCTCGA 57.648 47.619 0.00 0.00 0.00 4.04
981 2829 3.243367 CCATGTCCTTCTCTCTAAGCTCG 60.243 52.174 0.00 0.00 0.00 5.03
990 2838 0.539051 CCTTCGCCATGTCCTTCTCT 59.461 55.000 0.00 0.00 0.00 3.10
994 2842 1.604378 CTCCCTTCGCCATGTCCTT 59.396 57.895 0.00 0.00 0.00 3.36
999 2847 1.445095 CTCTCCTCCCTTCGCCATG 59.555 63.158 0.00 0.00 0.00 3.66
1298 3187 7.361201 GCACATAATCATAACCGAGCACATTAT 60.361 37.037 0.00 0.00 0.00 1.28
1299 3188 6.073276 GCACATAATCATAACCGAGCACATTA 60.073 38.462 0.00 0.00 0.00 1.90
1300 3189 5.277974 GCACATAATCATAACCGAGCACATT 60.278 40.000 0.00 0.00 0.00 2.71
1301 3190 4.214119 GCACATAATCATAACCGAGCACAT 59.786 41.667 0.00 0.00 0.00 3.21
1302 3191 3.559655 GCACATAATCATAACCGAGCACA 59.440 43.478 0.00 0.00 0.00 4.57
1303 3192 3.362986 CGCACATAATCATAACCGAGCAC 60.363 47.826 0.00 0.00 0.00 4.40
1304 3193 2.799978 CGCACATAATCATAACCGAGCA 59.200 45.455 0.00 0.00 0.00 4.26
1362 3521 2.224018 ACTACTAGCGTCCTACGAGGAG 60.224 54.545 3.22 1.53 46.90 3.69
1515 3737 6.698766 CAGCAAAGTTTTTAGCAGAATCTTGT 59.301 34.615 0.00 0.00 0.00 3.16
1516 3738 6.919662 TCAGCAAAGTTTTTAGCAGAATCTTG 59.080 34.615 0.00 0.00 0.00 3.02
1634 4201 1.228862 ACAATGTTGTCCTGCCCCC 60.229 57.895 0.00 0.00 36.50 5.40
1693 4463 2.094854 GCAAATAAGCAGAGCAACAGCT 60.095 45.455 0.00 0.00 43.02 4.24
1722 4492 8.390354 GCTCAAATTAATCAAACTTATTTGGGC 58.610 33.333 13.03 13.03 44.61 5.36
1760 4531 3.141398 GAGCAAGAATGTCAGTCCAACA 58.859 45.455 0.00 0.00 0.00 3.33
1764 4535 5.068987 AGAGATAGAGCAAGAATGTCAGTCC 59.931 44.000 0.00 0.00 0.00 3.85
2085 4856 1.750018 CATCACATTGAGGCCGGCA 60.750 57.895 30.85 7.96 0.00 5.69
2187 4958 0.174845 CGCCACCAAGGTCGAAGATA 59.825 55.000 0.00 0.00 40.67 1.98
2349 5120 1.244019 GGTTGCCGCTGATGTCCTTT 61.244 55.000 0.00 0.00 0.00 3.11
2433 5205 0.596083 CGATCTCGATGGTGGTCTGC 60.596 60.000 0.00 0.00 43.02 4.26
2532 5304 1.097547 CCACGGGATCCATGCACTTC 61.098 60.000 15.23 0.00 0.00 3.01
2544 5316 2.203788 AGGCACTTCTCCACGGGA 60.204 61.111 0.00 0.00 27.25 5.14
2662 5434 2.047274 GCACAGCTCCTTGCCGTA 60.047 61.111 0.72 0.00 44.23 4.02
3006 5779 4.101448 GTGATCTGGGGCACGCCT 62.101 66.667 8.20 0.00 42.25 5.52
3970 6849 1.069204 CGGGATGATGAAGACGACCAT 59.931 52.381 0.00 0.00 0.00 3.55
3974 6853 1.441729 GCCGGGATGATGAAGACGA 59.558 57.895 2.18 0.00 0.00 4.20
3976 6855 2.247437 GCGCCGGGATGATGAAGAC 61.247 63.158 2.18 0.00 0.00 3.01
4004 6883 1.007359 GGGTGAACTACTCCCTCCTCT 59.993 57.143 0.00 0.00 45.77 3.69
4063 6948 0.254747 ACGAGTGAGAGAGGGAGAGG 59.745 60.000 0.00 0.00 0.00 3.69
4069 6959 5.766150 ATCAAGAATACGAGTGAGAGAGG 57.234 43.478 0.00 0.00 0.00 3.69
4077 6969 4.037565 TCGTGCCATATCAAGAATACGAGT 59.962 41.667 0.00 0.00 34.83 4.18
4114 7006 8.677148 TGATCCAACTATAATAACAAAGCTCC 57.323 34.615 0.00 0.00 0.00 4.70
4154 7046 5.923733 ATTCATCAGAAGAACGTAGAGGT 57.076 39.130 0.00 0.00 37.14 3.85
4162 7055 8.787852 AGGTAAAACTCAATTCATCAGAAGAAC 58.212 33.333 0.00 0.00 37.14 3.01
4168 7061 8.025445 CCTCAAAGGTAAAACTCAATTCATCAG 58.975 37.037 0.00 0.00 0.00 2.90
4223 7116 3.189287 ACATCAAGTGTTCTCAAATCCGC 59.811 43.478 0.00 0.00 38.01 5.54
4257 7150 1.209504 CATTGTCACCACGGGTATCCT 59.790 52.381 0.00 0.00 32.11 3.24
4325 7218 3.673323 CGTCAATGTCACCTCGAGAATCA 60.673 47.826 15.71 7.93 33.17 2.57
4331 7224 3.442625 AGATTACGTCAATGTCACCTCGA 59.557 43.478 0.00 0.00 0.00 4.04
4346 7239 5.147330 TCAACCCCTATGCATAGATTACG 57.853 43.478 31.14 17.45 32.05 3.18
4427 7320 7.857389 CAGATTCATAATATTCAACCCAACACG 59.143 37.037 0.00 0.00 0.00 4.49
4490 7383 4.431416 ACTCCAATGTCACCACAAGTAA 57.569 40.909 0.00 0.00 35.64 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.