Multiple sequence alignment - TraesCS3B01G390100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G390100 chr3B 100.000 2605 0 0 1 2605 614252957 614250353 0.000000e+00 4811.0
1 TraesCS3B01G390100 chr3B 87.864 824 82 12 817 1627 613812111 613811293 0.000000e+00 952.0
2 TraesCS3B01G390100 chr3B 84.487 838 93 28 817 1627 614266543 614265716 0.000000e+00 793.0
3 TraesCS3B01G390100 chr3B 77.674 430 66 21 2054 2463 613808620 613808201 4.330000e-58 235.0
4 TraesCS3B01G390100 chr3B 80.495 323 49 11 2140 2458 613810734 613810422 4.330000e-58 235.0
5 TraesCS3B01G390100 chr3B 93.548 62 4 0 2360 2421 614264959 614264898 2.760000e-15 93.5
6 TraesCS3B01G390100 chr3D 92.782 1801 103 18 817 2601 462455635 462453846 0.000000e+00 2580.0
7 TraesCS3B01G390100 chr3D 86.738 837 76 25 817 1627 462246877 462246050 0.000000e+00 898.0
8 TraesCS3B01G390100 chr3D 82.609 322 48 5 2140 2458 462245408 462245092 7.100000e-71 278.0
9 TraesCS3B01G390100 chr3A 89.349 1812 131 30 817 2601 605241490 605239714 0.000000e+00 2220.0
10 TraesCS3B01G390100 chr3A 86.418 832 87 16 817 1627 605180435 605179609 0.000000e+00 887.0
11 TraesCS3B01G390100 chr3A 80.374 321 47 8 2140 2458 605175898 605175592 2.020000e-56 230.0
12 TraesCS3B01G390100 chr3A 83.051 236 29 9 2231 2463 605179032 605178805 1.220000e-48 204.0
13 TraesCS3B01G390100 chr3A 81.250 224 31 9 2245 2463 605176818 605176601 1.240000e-38 171.0
14 TraesCS3B01G390100 chr7A 93.889 360 16 3 1118 1471 680325386 680325745 2.950000e-149 538.0
15 TraesCS3B01G390100 chr7A 88.836 421 34 8 1060 1469 680264524 680264106 2.990000e-139 505.0
16 TraesCS3B01G390100 chr7B 89.835 423 30 8 1060 1471 661716683 661717103 4.940000e-147 531.0
17 TraesCS3B01G390100 chr5D 84.729 203 21 6 410 604 421534621 421534421 7.360000e-46 195.0
18 TraesCS3B01G390100 chrUn 81.818 231 37 5 410 639 49827592 49827818 3.420000e-44 189.0
19 TraesCS3B01G390100 chr4D 80.833 240 39 6 1392 1627 6776545 6776309 5.730000e-42 182.0
20 TraesCS3B01G390100 chr1A 85.246 183 19 5 2189 2368 242688846 242688669 5.730000e-42 182.0
21 TraesCS3B01G390100 chr1A 81.667 180 27 5 427 604 436424339 436424164 7.510000e-31 145.0
22 TraesCS3B01G390100 chr6D 78.899 218 31 8 1413 1627 27757244 27757449 1.630000e-27 134.0
23 TraesCS3B01G390100 chr7D 75.111 225 33 18 410 621 53633212 53632998 1.660000e-12 84.2
24 TraesCS3B01G390100 chr7D 85.897 78 5 5 437 512 489904775 489904848 7.730000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G390100 chr3B 614250353 614252957 2604 True 4811.00 4811 100.00000 1 2605 1 chr3B.!!$R1 2604
1 TraesCS3B01G390100 chr3B 613808201 613812111 3910 True 474.00 952 82.01100 817 2463 3 chr3B.!!$R2 1646
2 TraesCS3B01G390100 chr3B 614264898 614266543 1645 True 443.25 793 89.01750 817 2421 2 chr3B.!!$R3 1604
3 TraesCS3B01G390100 chr3D 462453846 462455635 1789 True 2580.00 2580 92.78200 817 2601 1 chr3D.!!$R1 1784
4 TraesCS3B01G390100 chr3D 462245092 462246877 1785 True 588.00 898 84.67350 817 2458 2 chr3D.!!$R2 1641
5 TraesCS3B01G390100 chr3A 605239714 605241490 1776 True 2220.00 2220 89.34900 817 2601 1 chr3A.!!$R1 1784
6 TraesCS3B01G390100 chr3A 605175592 605180435 4843 True 373.00 887 82.77325 817 2463 4 chr3A.!!$R2 1646

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
718 719 0.032952 CTTATGGTAAGCGCGCCCTA 59.967 55.0 30.33 17.34 0.0 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2158 4968 0.106868 TGGCAGCCAATCATCTCAGG 60.107 55.0 13.33 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 9.915629 ATATAGGATTCAGTTCTACGAATCAAC 57.084 33.333 12.65 0.00 46.12 3.18
54 55 5.420409 AGGATTCAGTTCTACGAATCAACC 58.580 41.667 12.65 0.00 46.12 3.77
55 56 5.046591 AGGATTCAGTTCTACGAATCAACCA 60.047 40.000 12.65 0.00 46.12 3.67
56 57 5.642063 GGATTCAGTTCTACGAATCAACCAA 59.358 40.000 12.65 0.00 46.12 3.67
57 58 5.917541 TTCAGTTCTACGAATCAACCAAC 57.082 39.130 0.00 0.00 0.00 3.77
58 59 4.312443 TCAGTTCTACGAATCAACCAACC 58.688 43.478 0.00 0.00 0.00 3.77
59 60 4.062293 CAGTTCTACGAATCAACCAACCA 58.938 43.478 0.00 0.00 0.00 3.67
60 61 4.513692 CAGTTCTACGAATCAACCAACCAA 59.486 41.667 0.00 0.00 0.00 3.67
61 62 4.514066 AGTTCTACGAATCAACCAACCAAC 59.486 41.667 0.00 0.00 0.00 3.77
62 63 3.061322 TCTACGAATCAACCAACCAACG 58.939 45.455 0.00 0.00 0.00 4.10
63 64 1.670791 ACGAATCAACCAACCAACGT 58.329 45.000 0.00 0.00 0.00 3.99
64 65 2.836262 ACGAATCAACCAACCAACGTA 58.164 42.857 0.00 0.00 0.00 3.57
65 66 2.803956 ACGAATCAACCAACCAACGTAG 59.196 45.455 0.00 0.00 0.00 3.51
66 67 3.061322 CGAATCAACCAACCAACGTAGA 58.939 45.455 0.00 0.00 0.00 2.59
67 68 3.682858 CGAATCAACCAACCAACGTAGAT 59.317 43.478 0.00 0.00 0.00 1.98
68 69 4.153475 CGAATCAACCAACCAACGTAGATT 59.847 41.667 0.00 0.00 0.00 2.40
69 70 5.334569 CGAATCAACCAACCAACGTAGATTT 60.335 40.000 0.00 0.00 0.00 2.17
70 71 6.399639 AATCAACCAACCAACGTAGATTTT 57.600 33.333 0.00 0.00 0.00 1.82
71 72 5.838531 TCAACCAACCAACGTAGATTTTT 57.161 34.783 0.00 0.00 0.00 1.94
99 100 7.900782 CAAGGATTGCAATTCTTCAAAATCT 57.099 32.000 27.02 4.33 40.39 2.40
100 101 7.960793 CAAGGATTGCAATTCTTCAAAATCTC 58.039 34.615 27.02 4.76 40.39 2.75
101 102 7.477945 AGGATTGCAATTCTTCAAAATCTCT 57.522 32.000 14.90 0.00 0.00 3.10
102 103 7.545489 AGGATTGCAATTCTTCAAAATCTCTC 58.455 34.615 14.90 0.00 0.00 3.20
103 104 7.177921 AGGATTGCAATTCTTCAAAATCTCTCA 59.822 33.333 14.90 0.00 0.00 3.27
104 105 7.816031 GGATTGCAATTCTTCAAAATCTCTCAA 59.184 33.333 14.33 0.00 0.00 3.02
105 106 9.199982 GATTGCAATTCTTCAAAATCTCTCAAA 57.800 29.630 14.33 0.00 0.00 2.69
106 107 8.945481 TTGCAATTCTTCAAAATCTCTCAAAA 57.055 26.923 0.00 0.00 0.00 2.44
107 108 8.945481 TGCAATTCTTCAAAATCTCTCAAAAA 57.055 26.923 0.00 0.00 0.00 1.94
108 109 9.550406 TGCAATTCTTCAAAATCTCTCAAAAAT 57.450 25.926 0.00 0.00 0.00 1.82
112 113 9.924650 ATTCTTCAAAATCTCTCAAAAATCCAG 57.075 29.630 0.00 0.00 0.00 3.86
113 114 8.469309 TCTTCAAAATCTCTCAAAAATCCAGT 57.531 30.769 0.00 0.00 0.00 4.00
114 115 8.917088 TCTTCAAAATCTCTCAAAAATCCAGTT 58.083 29.630 0.00 0.00 0.00 3.16
115 116 8.876275 TTCAAAATCTCTCAAAAATCCAGTTG 57.124 30.769 0.00 0.00 0.00 3.16
116 117 8.236585 TCAAAATCTCTCAAAAATCCAGTTGA 57.763 30.769 0.00 0.00 32.91 3.18
117 118 8.694540 TCAAAATCTCTCAAAAATCCAGTTGAA 58.305 29.630 0.00 0.00 33.52 2.69
118 119 9.485206 CAAAATCTCTCAAAAATCCAGTTGAAT 57.515 29.630 0.00 0.00 33.52 2.57
119 120 9.702494 AAAATCTCTCAAAAATCCAGTTGAATC 57.298 29.630 0.00 0.00 33.52 2.52
120 121 8.413309 AATCTCTCAAAAATCCAGTTGAATCA 57.587 30.769 0.00 0.00 33.52 2.57
121 122 7.822161 TCTCTCAAAAATCCAGTTGAATCAA 57.178 32.000 0.00 0.00 33.52 2.57
122 123 8.236585 TCTCTCAAAAATCCAGTTGAATCAAA 57.763 30.769 0.00 0.00 33.52 2.69
123 124 8.137437 TCTCTCAAAAATCCAGTTGAATCAAAC 58.863 33.333 0.00 0.00 33.52 2.93
124 125 7.780064 TCTCAAAAATCCAGTTGAATCAAACA 58.220 30.769 0.00 0.00 33.52 2.83
125 126 8.423349 TCTCAAAAATCCAGTTGAATCAAACAT 58.577 29.630 0.00 0.00 33.52 2.71
126 127 8.367943 TCAAAAATCCAGTTGAATCAAACATG 57.632 30.769 0.00 0.00 30.93 3.21
127 128 6.790285 AAAATCCAGTTGAATCAAACATGC 57.210 33.333 0.00 0.00 32.21 4.06
128 129 3.940209 TCCAGTTGAATCAAACATGCC 57.060 42.857 0.00 0.00 32.21 4.40
129 130 2.562298 TCCAGTTGAATCAAACATGCCC 59.438 45.455 0.00 0.00 32.21 5.36
130 131 2.564062 CCAGTTGAATCAAACATGCCCT 59.436 45.455 0.00 0.00 32.21 5.19
131 132 3.763360 CCAGTTGAATCAAACATGCCCTA 59.237 43.478 0.00 0.00 32.21 3.53
132 133 4.220382 CCAGTTGAATCAAACATGCCCTAA 59.780 41.667 0.00 0.00 32.21 2.69
133 134 5.279406 CCAGTTGAATCAAACATGCCCTAAA 60.279 40.000 0.00 0.00 32.21 1.85
134 135 6.400568 CAGTTGAATCAAACATGCCCTAAAT 58.599 36.000 0.00 0.00 32.21 1.40
135 136 6.532657 CAGTTGAATCAAACATGCCCTAAATC 59.467 38.462 0.00 0.00 32.21 2.17
136 137 6.438425 AGTTGAATCAAACATGCCCTAAATCT 59.562 34.615 0.00 0.00 32.21 2.40
137 138 6.855763 TGAATCAAACATGCCCTAAATCTT 57.144 33.333 0.00 0.00 0.00 2.40
138 139 6.632909 TGAATCAAACATGCCCTAAATCTTG 58.367 36.000 0.00 0.00 0.00 3.02
139 140 6.436847 TGAATCAAACATGCCCTAAATCTTGA 59.563 34.615 0.00 0.00 0.00 3.02
140 141 5.902613 TCAAACATGCCCTAAATCTTGAG 57.097 39.130 0.00 0.00 0.00 3.02
141 142 5.324409 TCAAACATGCCCTAAATCTTGAGT 58.676 37.500 0.00 0.00 0.00 3.41
142 143 6.480763 TCAAACATGCCCTAAATCTTGAGTA 58.519 36.000 0.00 0.00 0.00 2.59
143 144 6.374333 TCAAACATGCCCTAAATCTTGAGTAC 59.626 38.462 0.00 0.00 0.00 2.73
144 145 5.700402 ACATGCCCTAAATCTTGAGTACT 57.300 39.130 0.00 0.00 0.00 2.73
145 146 6.067217 ACATGCCCTAAATCTTGAGTACTT 57.933 37.500 0.00 0.00 0.00 2.24
146 147 6.116126 ACATGCCCTAAATCTTGAGTACTTC 58.884 40.000 0.00 0.00 0.00 3.01
147 148 6.069963 ACATGCCCTAAATCTTGAGTACTTCT 60.070 38.462 0.00 0.00 0.00 2.85
148 149 7.125811 ACATGCCCTAAATCTTGAGTACTTCTA 59.874 37.037 0.00 0.00 0.00 2.10
149 150 7.676683 TGCCCTAAATCTTGAGTACTTCTAT 57.323 36.000 0.00 0.00 0.00 1.98
150 151 8.090788 TGCCCTAAATCTTGAGTACTTCTATT 57.909 34.615 0.00 0.00 0.00 1.73
151 152 8.548877 TGCCCTAAATCTTGAGTACTTCTATTT 58.451 33.333 0.00 4.53 0.00 1.40
152 153 8.831550 GCCCTAAATCTTGAGTACTTCTATTTG 58.168 37.037 0.00 0.00 0.00 2.32
153 154 9.892130 CCCTAAATCTTGAGTACTTCTATTTGT 57.108 33.333 0.00 0.00 0.00 2.83
164 165 9.465985 GAGTACTTCTATTTGTATTGCTAGTCC 57.534 37.037 0.00 0.00 0.00 3.85
165 166 8.978472 AGTACTTCTATTTGTATTGCTAGTCCA 58.022 33.333 0.00 0.00 0.00 4.02
166 167 9.250624 GTACTTCTATTTGTATTGCTAGTCCAG 57.749 37.037 0.00 0.00 0.00 3.86
177 178 1.645034 CTAGTCCAGCACCGACATTG 58.355 55.000 0.00 0.00 32.41 2.82
178 179 0.973632 TAGTCCAGCACCGACATTGT 59.026 50.000 0.00 0.00 32.41 2.71
179 180 0.108585 AGTCCAGCACCGACATTGTT 59.891 50.000 0.00 0.00 32.41 2.83
180 181 0.951558 GTCCAGCACCGACATTGTTT 59.048 50.000 0.00 0.00 0.00 2.83
181 182 2.147958 GTCCAGCACCGACATTGTTTA 58.852 47.619 0.00 0.00 0.00 2.01
182 183 2.747446 GTCCAGCACCGACATTGTTTAT 59.253 45.455 0.00 0.00 0.00 1.40
183 184 3.936453 GTCCAGCACCGACATTGTTTATA 59.064 43.478 0.00 0.00 0.00 0.98
184 185 4.574828 GTCCAGCACCGACATTGTTTATAT 59.425 41.667 0.00 0.00 0.00 0.86
185 186 5.065988 GTCCAGCACCGACATTGTTTATATT 59.934 40.000 0.00 0.00 0.00 1.28
186 187 5.650266 TCCAGCACCGACATTGTTTATATTT 59.350 36.000 0.00 0.00 0.00 1.40
187 188 6.824196 TCCAGCACCGACATTGTTTATATTTA 59.176 34.615 0.00 0.00 0.00 1.40
188 189 6.910433 CCAGCACCGACATTGTTTATATTTAC 59.090 38.462 0.00 0.00 0.00 2.01
189 190 7.201696 CCAGCACCGACATTGTTTATATTTACT 60.202 37.037 0.00 0.00 0.00 2.24
190 191 8.822855 CAGCACCGACATTGTTTATATTTACTA 58.177 33.333 0.00 0.00 0.00 1.82
191 192 9.042008 AGCACCGACATTGTTTATATTTACTAG 57.958 33.333 0.00 0.00 0.00 2.57
192 193 9.037737 GCACCGACATTGTTTATATTTACTAGA 57.962 33.333 0.00 0.00 0.00 2.43
241 242 9.473007 TGAAATGTTCACCATATATCCTTTTGA 57.527 29.630 0.00 0.00 34.08 2.69
242 243 9.956720 GAAATGTTCACCATATATCCTTTTGAG 57.043 33.333 0.00 0.00 31.97 3.02
243 244 8.469309 AATGTTCACCATATATCCTTTTGAGG 57.531 34.615 0.00 0.00 31.97 3.86
244 245 7.206789 TGTTCACCATATATCCTTTTGAGGA 57.793 36.000 0.00 0.00 42.91 3.71
245 246 7.638444 TGTTCACCATATATCCTTTTGAGGAA 58.362 34.615 0.00 0.00 41.90 3.36
246 247 8.112822 TGTTCACCATATATCCTTTTGAGGAAA 58.887 33.333 0.00 0.00 41.90 3.13
247 248 8.966868 GTTCACCATATATCCTTTTGAGGAAAA 58.033 33.333 0.00 0.00 41.90 2.29
248 249 9.540538 TTCACCATATATCCTTTTGAGGAAAAA 57.459 29.630 0.00 0.00 41.90 1.94
249 250 9.713684 TCACCATATATCCTTTTGAGGAAAAAT 57.286 29.630 0.00 0.00 41.90 1.82
250 251 9.971922 CACCATATATCCTTTTGAGGAAAAATC 57.028 33.333 0.00 0.00 41.90 2.17
251 252 9.942526 ACCATATATCCTTTTGAGGAAAAATCT 57.057 29.630 0.00 0.00 41.90 2.40
275 276 9.979897 TCTTACTAGTAACATAGTTAGGTTGGA 57.020 33.333 11.38 0.00 37.24 3.53
277 278 7.657023 ACTAGTAACATAGTTAGGTTGGAGG 57.343 40.000 0.00 0.00 31.89 4.30
278 279 7.416731 ACTAGTAACATAGTTAGGTTGGAGGA 58.583 38.462 0.00 0.00 31.89 3.71
279 280 8.066247 ACTAGTAACATAGTTAGGTTGGAGGAT 58.934 37.037 0.00 0.00 31.89 3.24
280 281 7.362802 AGTAACATAGTTAGGTTGGAGGATC 57.637 40.000 0.00 0.00 32.05 3.36
296 297 5.041191 GAGGATCCATTGTTGGTGATAGT 57.959 43.478 15.82 0.00 44.06 2.12
297 298 5.440610 GAGGATCCATTGTTGGTGATAGTT 58.559 41.667 15.82 0.00 44.06 2.24
298 299 5.831103 AGGATCCATTGTTGGTGATAGTTT 58.169 37.500 15.82 0.00 44.06 2.66
299 300 6.256053 AGGATCCATTGTTGGTGATAGTTTT 58.744 36.000 15.82 0.00 44.06 2.43
300 301 6.378280 AGGATCCATTGTTGGTGATAGTTTTC 59.622 38.462 15.82 0.00 44.06 2.29
301 302 6.378280 GGATCCATTGTTGGTGATAGTTTTCT 59.622 38.462 6.95 0.00 44.06 2.52
302 303 7.093771 GGATCCATTGTTGGTGATAGTTTTCTT 60.094 37.037 6.95 0.00 44.06 2.52
303 304 7.595819 TCCATTGTTGGTGATAGTTTTCTTT 57.404 32.000 0.00 0.00 44.06 2.52
304 305 8.698973 TCCATTGTTGGTGATAGTTTTCTTTA 57.301 30.769 0.00 0.00 44.06 1.85
305 306 8.792633 TCCATTGTTGGTGATAGTTTTCTTTAG 58.207 33.333 0.00 0.00 44.06 1.85
306 307 8.028938 CCATTGTTGGTGATAGTTTTCTTTAGG 58.971 37.037 0.00 0.00 38.30 2.69
307 308 6.569179 TGTTGGTGATAGTTTTCTTTAGGC 57.431 37.500 0.00 0.00 0.00 3.93
308 309 6.065374 TGTTGGTGATAGTTTTCTTTAGGCA 58.935 36.000 0.00 0.00 0.00 4.75
309 310 6.206634 TGTTGGTGATAGTTTTCTTTAGGCAG 59.793 38.462 0.00 0.00 0.00 4.85
310 311 5.876357 TGGTGATAGTTTTCTTTAGGCAGT 58.124 37.500 0.00 0.00 0.00 4.40
311 312 6.303839 TGGTGATAGTTTTCTTTAGGCAGTT 58.696 36.000 0.00 0.00 0.00 3.16
312 313 6.775629 TGGTGATAGTTTTCTTTAGGCAGTTT 59.224 34.615 0.00 0.00 0.00 2.66
313 314 7.940137 TGGTGATAGTTTTCTTTAGGCAGTTTA 59.060 33.333 0.00 0.00 0.00 2.01
314 315 8.957466 GGTGATAGTTTTCTTTAGGCAGTTTAT 58.043 33.333 0.00 0.00 0.00 1.40
315 316 9.989869 GTGATAGTTTTCTTTAGGCAGTTTATC 57.010 33.333 0.00 0.00 0.00 1.75
316 317 9.733556 TGATAGTTTTCTTTAGGCAGTTTATCA 57.266 29.630 0.00 0.00 0.00 2.15
320 321 9.740710 AGTTTTCTTTAGGCAGTTTATCATAGT 57.259 29.630 0.00 0.00 0.00 2.12
325 326 9.692749 TCTTTAGGCAGTTTATCATAGTTATCG 57.307 33.333 0.00 0.00 0.00 2.92
326 327 9.477484 CTTTAGGCAGTTTATCATAGTTATCGT 57.523 33.333 0.00 0.00 0.00 3.73
327 328 9.826574 TTTAGGCAGTTTATCATAGTTATCGTT 57.173 29.630 0.00 0.00 0.00 3.85
328 329 9.826574 TTAGGCAGTTTATCATAGTTATCGTTT 57.173 29.630 0.00 0.00 0.00 3.60
330 331 9.826574 AGGCAGTTTATCATAGTTATCGTTTAA 57.173 29.630 0.00 0.00 0.00 1.52
344 345 9.046296 AGTTATCGTTTAAGGATTGATGATCAC 57.954 33.333 5.46 0.00 36.43 3.06
345 346 8.826710 GTTATCGTTTAAGGATTGATGATCACA 58.173 33.333 5.46 0.00 36.43 3.58
346 347 9.559732 TTATCGTTTAAGGATTGATGATCACAT 57.440 29.630 5.46 0.00 39.67 3.21
348 349 9.730705 ATCGTTTAAGGATTGATGATCACATAT 57.269 29.630 0.00 0.00 36.82 1.78
381 382 4.222589 GCGCGCGCACACACATAT 62.223 61.111 46.11 0.00 41.49 1.78
382 383 2.866010 GCGCGCGCACACACATATA 61.866 57.895 46.11 0.00 41.49 0.86
383 384 1.199126 CGCGCGCACACACATATAG 59.801 57.895 32.61 5.79 0.00 1.31
384 385 1.479420 CGCGCGCACACACATATAGT 61.479 55.000 32.61 0.00 0.00 2.12
385 386 0.650512 GCGCGCACACACATATAGTT 59.349 50.000 29.10 0.00 0.00 2.24
386 387 1.592110 GCGCGCACACACATATAGTTG 60.592 52.381 29.10 0.00 0.00 3.16
387 388 1.658596 CGCGCACACACATATAGTTGT 59.341 47.619 8.75 0.00 0.00 3.32
421 422 7.880059 AAATATATCCGTTAACTAGCGAACC 57.120 36.000 3.71 0.00 31.27 3.62
422 423 6.830873 ATATATCCGTTAACTAGCGAACCT 57.169 37.500 3.71 0.00 31.27 3.50
423 424 3.881937 ATCCGTTAACTAGCGAACCTT 57.118 42.857 3.71 0.00 31.27 3.50
424 425 3.221964 TCCGTTAACTAGCGAACCTTC 57.778 47.619 3.71 0.00 31.27 3.46
425 426 2.557924 TCCGTTAACTAGCGAACCTTCA 59.442 45.455 3.71 0.00 31.27 3.02
426 427 2.665052 CCGTTAACTAGCGAACCTTCAC 59.335 50.000 3.71 0.00 31.27 3.18
427 428 2.665052 CGTTAACTAGCGAACCTTCACC 59.335 50.000 3.71 0.00 31.27 4.02
428 429 3.656559 GTTAACTAGCGAACCTTCACCA 58.343 45.455 0.00 0.00 0.00 4.17
429 430 2.457366 AACTAGCGAACCTTCACCAG 57.543 50.000 0.00 0.00 0.00 4.00
442 443 2.535317 ACCAGGGAGGGTGGCATT 60.535 61.111 0.00 0.00 43.89 3.56
443 444 2.169810 ACCAGGGAGGGTGGCATTT 61.170 57.895 0.00 0.00 43.89 2.32
444 445 1.683365 CCAGGGAGGGTGGCATTTG 60.683 63.158 0.00 0.00 0.00 2.32
445 446 2.037847 AGGGAGGGTGGCATTTGC 59.962 61.111 0.00 0.00 41.14 3.68
446 447 3.451894 GGGAGGGTGGCATTTGCG 61.452 66.667 0.00 0.00 43.26 4.85
447 448 2.361104 GGAGGGTGGCATTTGCGA 60.361 61.111 0.00 0.00 43.26 5.10
448 449 1.976474 GGAGGGTGGCATTTGCGAA 60.976 57.895 0.00 0.00 43.26 4.70
449 450 1.212751 GAGGGTGGCATTTGCGAAC 59.787 57.895 0.00 0.00 43.26 3.95
450 451 2.126502 GGGTGGCATTTGCGAACG 60.127 61.111 0.00 0.00 43.26 3.95
451 452 2.642700 GGTGGCATTTGCGAACGT 59.357 55.556 0.00 0.00 43.26 3.99
452 453 1.007849 GGTGGCATTTGCGAACGTT 60.008 52.632 0.00 0.00 43.26 3.99
453 454 0.596341 GGTGGCATTTGCGAACGTTT 60.596 50.000 0.46 0.00 43.26 3.60
454 455 1.204792 GTGGCATTTGCGAACGTTTT 58.795 45.000 0.46 0.00 43.26 2.43
455 456 2.386249 GTGGCATTTGCGAACGTTTTA 58.614 42.857 0.46 0.00 43.26 1.52
456 457 2.403698 GTGGCATTTGCGAACGTTTTAG 59.596 45.455 0.46 0.00 43.26 1.85
457 458 1.982913 GGCATTTGCGAACGTTTTAGG 59.017 47.619 0.46 0.00 43.26 2.69
458 459 2.606065 GGCATTTGCGAACGTTTTAGGT 60.606 45.455 0.46 0.00 43.26 3.08
459 460 2.403698 GCATTTGCGAACGTTTTAGGTG 59.596 45.455 0.46 0.00 0.00 4.00
460 461 2.759538 TTTGCGAACGTTTTAGGTGG 57.240 45.000 0.46 0.00 0.00 4.61
461 462 0.308376 TTGCGAACGTTTTAGGTGGC 59.692 50.000 0.46 0.00 0.00 5.01
462 463 0.814410 TGCGAACGTTTTAGGTGGCA 60.814 50.000 0.46 0.00 0.00 4.92
463 464 0.519961 GCGAACGTTTTAGGTGGCAT 59.480 50.000 0.46 0.00 0.00 4.40
464 465 1.068816 GCGAACGTTTTAGGTGGCATT 60.069 47.619 0.46 0.00 0.00 3.56
465 466 2.606065 GCGAACGTTTTAGGTGGCATTT 60.606 45.455 0.46 0.00 0.00 2.32
466 467 3.634283 CGAACGTTTTAGGTGGCATTTT 58.366 40.909 0.46 0.00 0.00 1.82
467 468 4.045783 CGAACGTTTTAGGTGGCATTTTT 58.954 39.130 0.46 0.00 0.00 1.94
468 469 5.213675 CGAACGTTTTAGGTGGCATTTTTA 58.786 37.500 0.46 0.00 0.00 1.52
469 470 5.341196 CGAACGTTTTAGGTGGCATTTTTAG 59.659 40.000 0.46 0.00 0.00 1.85
470 471 5.777850 ACGTTTTAGGTGGCATTTTTAGT 57.222 34.783 0.00 0.00 0.00 2.24
471 472 6.151663 ACGTTTTAGGTGGCATTTTTAGTT 57.848 33.333 0.00 0.00 0.00 2.24
472 473 7.274603 ACGTTTTAGGTGGCATTTTTAGTTA 57.725 32.000 0.00 0.00 0.00 2.24
473 474 7.888424 ACGTTTTAGGTGGCATTTTTAGTTAT 58.112 30.769 0.00 0.00 0.00 1.89
474 475 7.810759 ACGTTTTAGGTGGCATTTTTAGTTATG 59.189 33.333 0.00 0.00 0.00 1.90
475 476 8.024285 CGTTTTAGGTGGCATTTTTAGTTATGA 58.976 33.333 0.00 0.00 0.00 2.15
476 477 9.353999 GTTTTAGGTGGCATTTTTAGTTATGAG 57.646 33.333 0.00 0.00 0.00 2.90
477 478 7.639113 TTAGGTGGCATTTTTAGTTATGAGG 57.361 36.000 0.00 0.00 0.00 3.86
478 479 4.956075 AGGTGGCATTTTTAGTTATGAGGG 59.044 41.667 0.00 0.00 0.00 4.30
479 480 4.099419 GGTGGCATTTTTAGTTATGAGGGG 59.901 45.833 0.00 0.00 0.00 4.79
480 481 4.953579 GTGGCATTTTTAGTTATGAGGGGA 59.046 41.667 0.00 0.00 0.00 4.81
481 482 5.598417 GTGGCATTTTTAGTTATGAGGGGAT 59.402 40.000 0.00 0.00 0.00 3.85
482 483 5.598005 TGGCATTTTTAGTTATGAGGGGATG 59.402 40.000 0.00 0.00 0.00 3.51
483 484 5.833131 GGCATTTTTAGTTATGAGGGGATGA 59.167 40.000 0.00 0.00 0.00 2.92
484 485 6.239036 GGCATTTTTAGTTATGAGGGGATGAC 60.239 42.308 0.00 0.00 0.00 3.06
485 486 6.321181 GCATTTTTAGTTATGAGGGGATGACA 59.679 38.462 0.00 0.00 0.00 3.58
486 487 7.469181 GCATTTTTAGTTATGAGGGGATGACAG 60.469 40.741 0.00 0.00 0.00 3.51
487 488 6.636454 TTTTAGTTATGAGGGGATGACAGT 57.364 37.500 0.00 0.00 0.00 3.55
488 489 6.636454 TTTAGTTATGAGGGGATGACAGTT 57.364 37.500 0.00 0.00 0.00 3.16
489 490 6.636454 TTAGTTATGAGGGGATGACAGTTT 57.364 37.500 0.00 0.00 0.00 2.66
490 491 5.104259 AGTTATGAGGGGATGACAGTTTC 57.896 43.478 0.00 0.00 0.00 2.78
491 492 4.785376 AGTTATGAGGGGATGACAGTTTCT 59.215 41.667 0.00 0.00 0.00 2.52
492 493 5.251700 AGTTATGAGGGGATGACAGTTTCTT 59.748 40.000 0.00 0.00 0.00 2.52
493 494 3.703001 TGAGGGGATGACAGTTTCTTC 57.297 47.619 0.00 0.00 0.00 2.87
494 495 2.978978 TGAGGGGATGACAGTTTCTTCA 59.021 45.455 0.00 0.00 31.26 3.02
495 496 3.008375 TGAGGGGATGACAGTTTCTTCAG 59.992 47.826 0.00 0.00 31.26 3.02
496 497 3.251484 AGGGGATGACAGTTTCTTCAGA 58.749 45.455 0.00 0.00 31.26 3.27
497 498 3.262915 AGGGGATGACAGTTTCTTCAGAG 59.737 47.826 0.00 0.00 31.26 3.35
498 499 3.008485 GGGGATGACAGTTTCTTCAGAGT 59.992 47.826 0.00 0.00 31.26 3.24
499 500 3.999663 GGGATGACAGTTTCTTCAGAGTG 59.000 47.826 0.00 0.00 31.26 3.51
500 501 4.262635 GGGATGACAGTTTCTTCAGAGTGA 60.263 45.833 0.00 0.00 31.26 3.41
501 502 4.688413 GGATGACAGTTTCTTCAGAGTGAC 59.312 45.833 0.00 0.00 31.26 3.67
502 503 4.736126 TGACAGTTTCTTCAGAGTGACA 57.264 40.909 0.00 0.00 0.00 3.58
503 504 5.282055 TGACAGTTTCTTCAGAGTGACAT 57.718 39.130 0.00 0.00 0.00 3.06
504 505 5.052481 TGACAGTTTCTTCAGAGTGACATG 58.948 41.667 0.00 0.00 0.00 3.21
505 506 5.163416 TGACAGTTTCTTCAGAGTGACATGA 60.163 40.000 0.00 0.00 0.00 3.07
506 507 5.053145 ACAGTTTCTTCAGAGTGACATGAC 58.947 41.667 0.00 0.00 0.00 3.06
507 508 5.052481 CAGTTTCTTCAGAGTGACATGACA 58.948 41.667 0.00 0.00 0.00 3.58
508 509 5.177142 CAGTTTCTTCAGAGTGACATGACAG 59.823 44.000 0.00 0.00 0.00 3.51
509 510 4.944619 TTCTTCAGAGTGACATGACAGT 57.055 40.909 5.15 5.15 0.00 3.55
510 511 4.944619 TCTTCAGAGTGACATGACAGTT 57.055 40.909 6.95 0.00 0.00 3.16
511 512 5.282055 TCTTCAGAGTGACATGACAGTTT 57.718 39.130 6.95 0.00 0.00 2.66
512 513 5.292765 TCTTCAGAGTGACATGACAGTTTC 58.707 41.667 6.95 2.31 0.00 2.78
513 514 3.995199 TCAGAGTGACATGACAGTTTCC 58.005 45.455 6.95 0.00 0.00 3.13
514 515 3.643320 TCAGAGTGACATGACAGTTTCCT 59.357 43.478 6.95 0.00 0.00 3.36
515 516 4.101585 TCAGAGTGACATGACAGTTTCCTT 59.898 41.667 6.95 0.00 0.00 3.36
516 517 4.450419 CAGAGTGACATGACAGTTTCCTTC 59.550 45.833 6.95 0.00 0.00 3.46
517 518 3.393800 AGTGACATGACAGTTTCCTTCG 58.606 45.455 0.00 0.00 0.00 3.79
518 519 3.069586 AGTGACATGACAGTTTCCTTCGA 59.930 43.478 0.00 0.00 0.00 3.71
519 520 3.430218 GTGACATGACAGTTTCCTTCGAG 59.570 47.826 0.00 0.00 0.00 4.04
520 521 3.320826 TGACATGACAGTTTCCTTCGAGA 59.679 43.478 0.00 0.00 0.00 4.04
521 522 4.202212 TGACATGACAGTTTCCTTCGAGAA 60.202 41.667 0.00 0.00 0.00 2.87
522 523 4.310769 ACATGACAGTTTCCTTCGAGAAG 58.689 43.478 0.00 5.90 38.14 2.85
551 552 7.988904 TTTTTCGTTTTAAAACATCCGTCAT 57.011 28.000 26.24 0.00 38.81 3.06
552 553 7.988904 TTTTCGTTTTAAAACATCCGTCATT 57.011 28.000 26.24 0.00 38.81 2.57
553 554 7.988904 TTTCGTTTTAAAACATCCGTCATTT 57.011 28.000 26.24 0.00 38.81 2.32
554 555 6.978024 TCGTTTTAAAACATCCGTCATTTG 57.022 33.333 26.24 9.16 38.81 2.32
555 556 6.726230 TCGTTTTAAAACATCCGTCATTTGA 58.274 32.000 26.24 11.02 38.81 2.69
556 557 7.364200 TCGTTTTAAAACATCCGTCATTTGAT 58.636 30.769 26.24 0.00 38.81 2.57
557 558 7.535940 TCGTTTTAAAACATCCGTCATTTGATC 59.464 33.333 26.24 0.00 38.81 2.92
558 559 7.537306 CGTTTTAAAACATCCGTCATTTGATCT 59.463 33.333 26.24 0.00 38.81 2.75
559 560 9.191995 GTTTTAAAACATCCGTCATTTGATCTT 57.808 29.630 23.12 0.00 38.74 2.40
560 561 9.757227 TTTTAAAACATCCGTCATTTGATCTTT 57.243 25.926 0.00 0.00 0.00 2.52
561 562 8.964420 TTAAAACATCCGTCATTTGATCTTTC 57.036 30.769 0.00 0.00 0.00 2.62
562 563 6.824305 AAACATCCGTCATTTGATCTTTCT 57.176 33.333 0.00 0.00 0.00 2.52
563 564 6.824305 AACATCCGTCATTTGATCTTTCTT 57.176 33.333 0.00 0.00 0.00 2.52
564 565 6.428385 ACATCCGTCATTTGATCTTTCTTC 57.572 37.500 0.00 0.00 0.00 2.87
565 566 5.939883 ACATCCGTCATTTGATCTTTCTTCA 59.060 36.000 0.00 0.00 0.00 3.02
566 567 5.862924 TCCGTCATTTGATCTTTCTTCAC 57.137 39.130 0.00 0.00 0.00 3.18
567 568 5.304778 TCCGTCATTTGATCTTTCTTCACA 58.695 37.500 0.00 0.00 0.00 3.58
568 569 5.762711 TCCGTCATTTGATCTTTCTTCACAA 59.237 36.000 0.00 0.00 0.00 3.33
569 570 5.853282 CCGTCATTTGATCTTTCTTCACAAC 59.147 40.000 0.00 0.00 0.00 3.32
570 571 6.293626 CCGTCATTTGATCTTTCTTCACAACT 60.294 38.462 0.00 0.00 0.00 3.16
571 572 7.134815 CGTCATTTGATCTTTCTTCACAACTT 58.865 34.615 0.00 0.00 0.00 2.66
572 573 8.282592 CGTCATTTGATCTTTCTTCACAACTTA 58.717 33.333 0.00 0.00 0.00 2.24
573 574 9.950680 GTCATTTGATCTTTCTTCACAACTTAA 57.049 29.630 0.00 0.00 0.00 1.85
579 580 9.052759 TGATCTTTCTTCACAACTTAAACTACC 57.947 33.333 0.00 0.00 0.00 3.18
580 581 8.974060 ATCTTTCTTCACAACTTAAACTACCA 57.026 30.769 0.00 0.00 0.00 3.25
581 582 8.974060 TCTTTCTTCACAACTTAAACTACCAT 57.026 30.769 0.00 0.00 0.00 3.55
582 583 9.052759 TCTTTCTTCACAACTTAAACTACCATC 57.947 33.333 0.00 0.00 0.00 3.51
583 584 8.740123 TTTCTTCACAACTTAAACTACCATCA 57.260 30.769 0.00 0.00 0.00 3.07
584 585 8.740123 TTCTTCACAACTTAAACTACCATCAA 57.260 30.769 0.00 0.00 0.00 2.57
585 586 8.740123 TCTTCACAACTTAAACTACCATCAAA 57.260 30.769 0.00 0.00 0.00 2.69
586 587 9.349713 TCTTCACAACTTAAACTACCATCAAAT 57.650 29.630 0.00 0.00 0.00 2.32
587 588 9.398170 CTTCACAACTTAAACTACCATCAAATG 57.602 33.333 0.00 0.00 0.00 2.32
588 589 8.684386 TCACAACTTAAACTACCATCAAATGA 57.316 30.769 0.00 0.00 0.00 2.57
589 590 8.564574 TCACAACTTAAACTACCATCAAATGAC 58.435 33.333 0.00 0.00 0.00 3.06
590 591 7.533900 CACAACTTAAACTACCATCAAATGACG 59.466 37.037 0.00 0.00 0.00 4.35
591 592 7.227910 ACAACTTAAACTACCATCAAATGACGT 59.772 33.333 0.00 0.00 0.00 4.34
592 593 7.739498 ACTTAAACTACCATCAAATGACGTT 57.261 32.000 0.00 0.00 0.00 3.99
593 594 7.581476 ACTTAAACTACCATCAAATGACGTTG 58.419 34.615 0.00 0.00 0.00 4.10
594 595 5.371115 AAACTACCATCAAATGACGTTGG 57.629 39.130 0.00 0.00 0.00 3.77
595 596 2.747446 ACTACCATCAAATGACGTTGGC 59.253 45.455 0.09 0.00 0.00 4.52
596 597 0.887933 ACCATCAAATGACGTTGGCC 59.112 50.000 0.00 0.00 0.00 5.36
597 598 1.176527 CCATCAAATGACGTTGGCCT 58.823 50.000 3.32 0.00 0.00 5.19
598 599 1.135315 CCATCAAATGACGTTGGCCTG 60.135 52.381 3.32 0.00 0.00 4.85
599 600 0.527565 ATCAAATGACGTTGGCCTGC 59.472 50.000 3.32 0.00 0.00 4.85
600 601 1.080569 CAAATGACGTTGGCCTGCC 60.081 57.895 3.32 0.00 0.00 4.85
601 602 1.530419 AAATGACGTTGGCCTGCCA 60.530 52.632 6.80 6.80 45.63 4.92
610 611 3.984732 GGCCTGCCACCTCCCTTT 61.985 66.667 2.58 0.00 35.81 3.11
611 612 2.361737 GCCTGCCACCTCCCTTTC 60.362 66.667 0.00 0.00 0.00 2.62
612 613 3.170362 CCTGCCACCTCCCTTTCA 58.830 61.111 0.00 0.00 0.00 2.69
613 614 1.001641 CCTGCCACCTCCCTTTCAG 60.002 63.158 0.00 0.00 0.00 3.02
614 615 1.676967 CTGCCACCTCCCTTTCAGC 60.677 63.158 0.00 0.00 0.00 4.26
615 616 2.416107 CTGCCACCTCCCTTTCAGCA 62.416 60.000 0.00 0.00 0.00 4.41
616 617 1.228552 GCCACCTCCCTTTCAGCAA 60.229 57.895 0.00 0.00 0.00 3.91
617 618 0.827507 GCCACCTCCCTTTCAGCAAA 60.828 55.000 0.00 0.00 0.00 3.68
618 619 0.961753 CCACCTCCCTTTCAGCAAAC 59.038 55.000 0.00 0.00 0.00 2.93
619 620 1.691196 CACCTCCCTTTCAGCAAACA 58.309 50.000 0.00 0.00 0.00 2.83
620 621 2.242043 CACCTCCCTTTCAGCAAACAT 58.758 47.619 0.00 0.00 0.00 2.71
621 622 2.229784 CACCTCCCTTTCAGCAAACATC 59.770 50.000 0.00 0.00 0.00 3.06
622 623 2.158475 ACCTCCCTTTCAGCAAACATCA 60.158 45.455 0.00 0.00 0.00 3.07
623 624 2.490903 CCTCCCTTTCAGCAAACATCAG 59.509 50.000 0.00 0.00 0.00 2.90
624 625 1.888512 TCCCTTTCAGCAAACATCAGC 59.111 47.619 0.00 0.00 0.00 4.26
625 626 1.891150 CCCTTTCAGCAAACATCAGCT 59.109 47.619 0.00 0.00 42.94 4.24
631 632 2.584835 AGCAAACATCAGCTGGGTAA 57.415 45.000 15.13 0.00 40.13 2.85
632 633 2.162681 AGCAAACATCAGCTGGGTAAC 58.837 47.619 15.13 6.11 40.13 2.50
633 634 1.885887 GCAAACATCAGCTGGGTAACA 59.114 47.619 15.13 0.00 39.74 2.41
666 667 3.347958 AATATAATTGTGCAACGGCCG 57.652 42.857 26.86 26.86 42.39 6.13
667 668 1.018148 TATAATTGTGCAACGGCCGG 58.982 50.000 31.76 14.21 42.39 6.13
668 669 0.678366 ATAATTGTGCAACGGCCGGA 60.678 50.000 31.76 7.27 42.39 5.14
669 670 0.678366 TAATTGTGCAACGGCCGGAT 60.678 50.000 31.76 15.76 42.39 4.18
670 671 1.933115 AATTGTGCAACGGCCGGATC 61.933 55.000 31.76 17.52 42.39 3.36
672 673 4.778143 GTGCAACGGCCGGATCCT 62.778 66.667 31.76 4.28 40.13 3.24
673 674 4.028490 TGCAACGGCCGGATCCTT 62.028 61.111 31.76 11.61 40.13 3.36
674 675 2.750237 GCAACGGCCGGATCCTTT 60.750 61.111 31.76 10.75 0.00 3.11
675 676 2.340328 GCAACGGCCGGATCCTTTT 61.340 57.895 31.76 9.90 0.00 2.27
676 677 1.800681 CAACGGCCGGATCCTTTTC 59.199 57.895 31.76 0.00 0.00 2.29
677 678 1.743995 AACGGCCGGATCCTTTTCG 60.744 57.895 31.76 10.65 0.00 3.46
678 679 2.895372 CGGCCGGATCCTTTTCGG 60.895 66.667 20.10 6.58 45.84 4.30
679 680 2.271173 GGCCGGATCCTTTTCGGT 59.729 61.111 5.05 0.00 44.97 4.69
680 681 2.112815 GGCCGGATCCTTTTCGGTG 61.113 63.158 5.05 0.00 44.97 4.94
681 682 1.376812 GCCGGATCCTTTTCGGTGT 60.377 57.895 5.05 0.00 44.97 4.16
682 683 1.644786 GCCGGATCCTTTTCGGTGTG 61.645 60.000 5.05 0.00 44.97 3.82
683 684 1.644786 CCGGATCCTTTTCGGTGTGC 61.645 60.000 10.75 0.00 39.04 4.57
684 685 1.644786 CGGATCCTTTTCGGTGTGCC 61.645 60.000 10.75 0.00 0.00 5.01
685 686 0.608035 GGATCCTTTTCGGTGTGCCA 60.608 55.000 3.84 0.00 34.09 4.92
686 687 1.243902 GATCCTTTTCGGTGTGCCAA 58.756 50.000 0.00 0.00 34.09 4.52
687 688 1.200020 GATCCTTTTCGGTGTGCCAAG 59.800 52.381 0.00 0.00 34.09 3.61
688 689 0.821711 TCCTTTTCGGTGTGCCAAGG 60.822 55.000 0.00 0.00 37.01 3.61
689 690 1.007387 CTTTTCGGTGTGCCAAGGC 60.007 57.895 3.61 3.61 42.35 4.35
690 691 2.420466 CTTTTCGGTGTGCCAAGGCC 62.420 60.000 8.89 0.00 41.09 5.19
691 692 2.920076 TTTTCGGTGTGCCAAGGCCT 62.920 55.000 0.00 0.00 41.09 5.19
692 693 2.058125 TTTCGGTGTGCCAAGGCCTA 62.058 55.000 5.16 0.00 41.09 3.93
693 694 2.436646 CGGTGTGCCAAGGCCTAG 60.437 66.667 5.16 0.88 41.09 3.02
694 695 2.751837 GGTGTGCCAAGGCCTAGC 60.752 66.667 18.63 18.63 41.09 3.42
704 705 4.809070 GGCCTAGCCCAGCTTATG 57.191 61.111 0.00 0.00 44.06 1.90
715 716 2.631984 GCTTATGGTAAGCGCGCC 59.368 61.111 30.33 13.41 33.20 6.53
716 717 2.893449 GCTTATGGTAAGCGCGCCC 61.893 63.158 30.33 22.75 33.20 6.13
717 718 1.227556 CTTATGGTAAGCGCGCCCT 60.228 57.895 30.33 18.55 0.00 5.19
718 719 0.032952 CTTATGGTAAGCGCGCCCTA 59.967 55.000 30.33 17.34 0.00 3.53
719 720 0.464870 TTATGGTAAGCGCGCCCTAA 59.535 50.000 30.33 17.43 0.00 2.69
720 721 0.682852 TATGGTAAGCGCGCCCTAAT 59.317 50.000 30.33 17.49 0.00 1.73
721 722 0.602905 ATGGTAAGCGCGCCCTAATC 60.603 55.000 30.33 11.78 0.00 1.75
722 723 2.308039 GGTAAGCGCGCCCTAATCG 61.308 63.158 30.33 0.00 0.00 3.34
730 731 3.959478 CGCCCTAATCGCTACAGAA 57.041 52.632 0.00 0.00 0.00 3.02
731 732 1.488527 CGCCCTAATCGCTACAGAAC 58.511 55.000 0.00 0.00 0.00 3.01
732 733 1.488527 GCCCTAATCGCTACAGAACG 58.511 55.000 0.00 0.00 0.00 3.95
733 734 1.488527 CCCTAATCGCTACAGAACGC 58.511 55.000 0.00 0.00 0.00 4.84
734 735 1.202371 CCCTAATCGCTACAGAACGCA 60.202 52.381 0.00 0.00 0.00 5.24
735 736 1.852895 CCTAATCGCTACAGAACGCAC 59.147 52.381 0.00 0.00 0.00 5.34
736 737 1.852895 CTAATCGCTACAGAACGCACC 59.147 52.381 0.00 0.00 0.00 5.01
737 738 0.037697 AATCGCTACAGAACGCACCA 60.038 50.000 0.00 0.00 0.00 4.17
738 739 0.037697 ATCGCTACAGAACGCACCAA 60.038 50.000 0.00 0.00 0.00 3.67
739 740 0.666274 TCGCTACAGAACGCACCAAG 60.666 55.000 0.00 0.00 0.00 3.61
740 741 0.666274 CGCTACAGAACGCACCAAGA 60.666 55.000 0.00 0.00 0.00 3.02
741 742 1.508632 GCTACAGAACGCACCAAGAA 58.491 50.000 0.00 0.00 0.00 2.52
742 743 1.461127 GCTACAGAACGCACCAAGAAG 59.539 52.381 0.00 0.00 0.00 2.85
743 744 1.461127 CTACAGAACGCACCAAGAAGC 59.539 52.381 0.00 0.00 0.00 3.86
744 745 1.166531 ACAGAACGCACCAAGAAGCC 61.167 55.000 0.00 0.00 0.00 4.35
745 746 1.600916 AGAACGCACCAAGAAGCCC 60.601 57.895 0.00 0.00 0.00 5.19
746 747 2.597510 AACGCACCAAGAAGCCCC 60.598 61.111 0.00 0.00 0.00 5.80
747 748 4.660938 ACGCACCAAGAAGCCCCC 62.661 66.667 0.00 0.00 0.00 5.40
763 764 2.572209 CCCCCGAACTTCACCTAAAA 57.428 50.000 0.00 0.00 0.00 1.52
764 765 2.866351 CCCCCGAACTTCACCTAAAAA 58.134 47.619 0.00 0.00 0.00 1.94
765 766 2.817844 CCCCCGAACTTCACCTAAAAAG 59.182 50.000 0.00 0.00 0.00 2.27
766 767 3.497227 CCCCCGAACTTCACCTAAAAAGA 60.497 47.826 0.00 0.00 0.00 2.52
767 768 4.139038 CCCCGAACTTCACCTAAAAAGAA 58.861 43.478 0.00 0.00 0.00 2.52
768 769 4.581409 CCCCGAACTTCACCTAAAAAGAAA 59.419 41.667 0.00 0.00 0.00 2.52
769 770 5.278315 CCCCGAACTTCACCTAAAAAGAAAG 60.278 44.000 0.00 0.00 0.00 2.62
770 771 5.212934 CCGAACTTCACCTAAAAAGAAAGC 58.787 41.667 0.00 0.00 0.00 3.51
771 772 5.212934 CGAACTTCACCTAAAAAGAAAGCC 58.787 41.667 0.00 0.00 0.00 4.35
772 773 5.529791 GAACTTCACCTAAAAAGAAAGCCC 58.470 41.667 0.00 0.00 0.00 5.19
773 774 3.895656 ACTTCACCTAAAAAGAAAGCCCC 59.104 43.478 0.00 0.00 0.00 5.80
774 775 2.884320 TCACCTAAAAAGAAAGCCCCC 58.116 47.619 0.00 0.00 0.00 5.40
790 791 2.447630 CCCCCAAACAAACCTTCCC 58.552 57.895 0.00 0.00 0.00 3.97
791 792 1.468506 CCCCCAAACAAACCTTCCCG 61.469 60.000 0.00 0.00 0.00 5.14
792 793 1.365999 CCCAAACAAACCTTCCCGC 59.634 57.895 0.00 0.00 0.00 6.13
793 794 1.007849 CCAAACAAACCTTCCCGCG 60.008 57.895 0.00 0.00 0.00 6.46
794 795 1.660264 CAAACAAACCTTCCCGCGC 60.660 57.895 0.00 0.00 0.00 6.86
795 796 3.189010 AAACAAACCTTCCCGCGCG 62.189 57.895 25.67 25.67 0.00 6.86
812 813 2.778679 GCGGAACTGCGACATGAC 59.221 61.111 0.00 0.00 0.00 3.06
813 814 3.071459 GCGGAACTGCGACATGACG 62.071 63.158 13.27 13.27 0.00 4.35
814 815 1.443702 CGGAACTGCGACATGACGA 60.444 57.895 21.40 5.76 35.09 4.20
815 816 1.406219 CGGAACTGCGACATGACGAG 61.406 60.000 21.40 16.11 35.09 4.18
829 830 2.214181 GACGAGCACACGGATCCACT 62.214 60.000 13.41 0.00 37.61 4.00
834 835 1.219124 CACACGGATCCACTCCCTG 59.781 63.158 13.41 0.00 41.49 4.45
835 836 2.187946 CACGGATCCACTCCCTGC 59.812 66.667 13.41 0.00 41.49 4.85
860 861 1.528824 CCAGATCCAGCCGTCCATT 59.471 57.895 0.00 0.00 0.00 3.16
872 873 2.616842 GCCGTCCATTAAATCCAACGAT 59.383 45.455 0.00 0.00 32.17 3.73
910 911 2.186903 CGATCCGGACCCCAACAG 59.813 66.667 6.12 0.00 0.00 3.16
929 930 2.220586 TCTCCACCAATCACGCCCA 61.221 57.895 0.00 0.00 0.00 5.36
932 933 2.472059 CCACCAATCACGCCCATCG 61.472 63.158 0.00 0.00 45.38 3.84
933 934 1.449423 CACCAATCACGCCCATCGA 60.449 57.895 0.00 0.00 41.67 3.59
951 952 1.722011 GACGCACCCCCATATATTCG 58.278 55.000 0.00 0.00 0.00 3.34
956 957 1.351017 CACCCCCATATATTCGCACCT 59.649 52.381 0.00 0.00 0.00 4.00
960 961 1.405526 CCCATATATTCGCACCTCCCG 60.406 57.143 0.00 0.00 0.00 5.14
1039 1057 1.771255 CCTTCCCCAATCCGATCTCTT 59.229 52.381 0.00 0.00 0.00 2.85
1055 1082 4.735132 TTGTCGCCTCCGCCGAAG 62.735 66.667 0.00 0.00 36.36 3.79
1090 1117 4.459089 GCCGAGAAGAAGCCCGCT 62.459 66.667 0.00 0.00 0.00 5.52
1114 1141 0.832135 AGAAGAAGCCGGTGGAGACA 60.832 55.000 1.90 0.00 38.70 3.41
1472 1508 6.023603 ACCAAGTTCACCTCCTCTTAGATTA 58.976 40.000 0.00 0.00 0.00 1.75
1494 1534 2.797156 CCGTCGCCTGAATCTCTTATTG 59.203 50.000 0.00 0.00 0.00 1.90
1513 1553 1.611491 TGGCTTTGTTCCGAATGTTCC 59.389 47.619 0.00 0.00 0.00 3.62
1538 1578 3.971305 TGTCGTCAATCATAGGGGGTTAT 59.029 43.478 0.00 0.00 0.00 1.89
1600 3204 7.649533 TGCTAAATCAATGAATCATCCAGTT 57.350 32.000 0.00 0.00 0.00 3.16
1742 3384 3.674410 GCCTTGTTTGATTAAGCTGCTCC 60.674 47.826 1.00 0.00 0.00 4.70
1941 3789 4.553429 CGAGCTTTTAACGCCATTAACTTG 59.447 41.667 0.00 0.00 32.29 3.16
1986 4077 2.099427 GTCAAGCCGTACTCTAGGAAGG 59.901 54.545 0.00 0.00 0.00 3.46
2158 4968 8.576442 TCCTTGGTTTTCTGTAGAATTCATTTC 58.424 33.333 8.44 0.00 33.54 2.17
2159 4969 7.814587 CCTTGGTTTTCTGTAGAATTCATTTCC 59.185 37.037 8.44 0.00 34.67 3.13
2345 6835 7.751348 CAGCCGTATTCTAGTGATTCTGTATAC 59.249 40.741 0.00 0.00 0.00 1.47
2346 6836 6.741811 GCCGTATTCTAGTGATTCTGTATACG 59.258 42.308 0.00 0.00 35.04 3.06
2347 6837 7.572724 GCCGTATTCTAGTGATTCTGTATACGT 60.573 40.741 0.00 0.00 33.92 3.57
2348 6838 7.745155 CCGTATTCTAGTGATTCTGTATACGTG 59.255 40.741 0.00 0.00 33.92 4.49
2426 6916 5.013079 TGGTCATCCCTGTAGCTTAATATGG 59.987 44.000 0.00 0.00 0.00 2.74
2432 6922 5.778750 TCCCTGTAGCTTAATATGGTACTCC 59.221 44.000 13.93 0.00 38.67 3.85
2473 6964 9.429600 CGAACGATTTTATTATCCTTAAACACC 57.570 33.333 0.00 0.00 0.00 4.16
2540 7031 2.562298 TGGCAGCTTCAAACCAATTAGG 59.438 45.455 0.00 0.00 45.67 2.69
2545 7036 2.496070 GCTTCAAACCAATTAGGACCCC 59.504 50.000 1.54 0.00 41.22 4.95
2547 7038 1.004979 TCAAACCAATTAGGACCCCGG 59.995 52.381 0.00 0.00 41.22 5.73
2577 7068 4.342665 AGCTCTACTGTATACTCCCTTTGC 59.657 45.833 4.17 1.49 0.00 3.68
2601 7092 9.731819 TGCAAACAAATATAAGACGTTTTACAA 57.268 25.926 0.00 0.00 0.00 2.41
2604 7095 9.902196 AAACAAATATAAGACGTTTTACAAGGG 57.098 29.630 0.00 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.915629 GTTGATTCGTAGAACTGAATCCTATAT 57.084 33.333 11.23 0.00 46.29 0.86
28 29 8.358148 GGTTGATTCGTAGAACTGAATCCTATA 58.642 37.037 11.23 0.00 46.29 1.31
29 30 7.147724 TGGTTGATTCGTAGAACTGAATCCTAT 60.148 37.037 11.23 0.00 46.29 2.57
30 31 6.153851 TGGTTGATTCGTAGAACTGAATCCTA 59.846 38.462 11.23 0.00 46.29 2.94
31 32 5.046591 TGGTTGATTCGTAGAACTGAATCCT 60.047 40.000 11.23 0.00 46.29 3.24
32 33 5.175859 TGGTTGATTCGTAGAACTGAATCC 58.824 41.667 11.23 0.00 46.29 3.01
33 34 6.402226 GGTTGGTTGATTCGTAGAACTGAATC 60.402 42.308 7.76 7.76 46.77 2.52
34 35 5.411669 GGTTGGTTGATTCGTAGAACTGAAT 59.588 40.000 0.00 0.00 45.90 2.57
35 36 4.753107 GGTTGGTTGATTCGTAGAACTGAA 59.247 41.667 0.00 0.00 45.90 3.02
36 37 4.202274 TGGTTGGTTGATTCGTAGAACTGA 60.202 41.667 0.00 0.00 45.90 3.41
37 38 4.062293 TGGTTGGTTGATTCGTAGAACTG 58.938 43.478 0.00 0.00 45.90 3.16
38 39 4.345859 TGGTTGGTTGATTCGTAGAACT 57.654 40.909 0.00 0.00 45.90 3.01
39 40 4.609783 CGTTGGTTGGTTGATTCGTAGAAC 60.610 45.833 0.00 0.00 45.90 3.01
40 41 3.495377 CGTTGGTTGGTTGATTCGTAGAA 59.505 43.478 0.00 0.00 45.90 2.10
41 42 3.061322 CGTTGGTTGGTTGATTCGTAGA 58.939 45.455 0.00 0.00 0.00 2.59
42 43 2.803956 ACGTTGGTTGGTTGATTCGTAG 59.196 45.455 0.00 0.00 0.00 3.51
43 44 2.836262 ACGTTGGTTGGTTGATTCGTA 58.164 42.857 0.00 0.00 0.00 3.43
44 45 1.670791 ACGTTGGTTGGTTGATTCGT 58.329 45.000 0.00 0.00 0.00 3.85
45 46 3.061322 TCTACGTTGGTTGGTTGATTCG 58.939 45.455 0.00 0.00 0.00 3.34
46 47 5.622770 AATCTACGTTGGTTGGTTGATTC 57.377 39.130 0.00 0.00 34.93 2.52
47 48 6.399639 AAAATCTACGTTGGTTGGTTGATT 57.600 33.333 0.00 0.00 39.24 2.57
48 49 6.399639 AAAAATCTACGTTGGTTGGTTGAT 57.600 33.333 0.00 0.00 31.55 2.57
49 50 5.838531 AAAAATCTACGTTGGTTGGTTGA 57.161 34.783 0.00 0.00 0.00 3.18
70 71 8.503458 TTTGAAGAATTGCAATCCTTGAAAAA 57.497 26.923 17.98 11.72 30.50 1.94
71 72 8.503458 TTTTGAAGAATTGCAATCCTTGAAAA 57.497 26.923 24.35 24.35 32.35 2.29
72 73 8.680039 ATTTTGAAGAATTGCAATCCTTGAAA 57.320 26.923 16.31 16.55 31.47 2.69
73 74 8.152246 AGATTTTGAAGAATTGCAATCCTTGAA 58.848 29.630 16.31 11.02 0.00 2.69
74 75 7.673180 AGATTTTGAAGAATTGCAATCCTTGA 58.327 30.769 16.31 4.28 0.00 3.02
75 76 7.817962 AGAGATTTTGAAGAATTGCAATCCTTG 59.182 33.333 16.31 0.00 0.00 3.61
76 77 7.904205 AGAGATTTTGAAGAATTGCAATCCTT 58.096 30.769 11.06 11.06 0.00 3.36
77 78 7.177921 TGAGAGATTTTGAAGAATTGCAATCCT 59.822 33.333 13.38 1.14 0.00 3.24
78 79 7.318141 TGAGAGATTTTGAAGAATTGCAATCC 58.682 34.615 13.38 0.00 0.00 3.01
79 80 8.752766 TTGAGAGATTTTGAAGAATTGCAATC 57.247 30.769 13.38 6.58 0.00 2.67
80 81 9.550406 TTTTGAGAGATTTTGAAGAATTGCAAT 57.450 25.926 5.99 5.99 0.00 3.56
81 82 8.945481 TTTTGAGAGATTTTGAAGAATTGCAA 57.055 26.923 0.00 0.00 0.00 4.08
82 83 8.945481 TTTTTGAGAGATTTTGAAGAATTGCA 57.055 26.923 0.00 0.00 0.00 4.08
86 87 9.924650 CTGGATTTTTGAGAGATTTTGAAGAAT 57.075 29.630 0.00 0.00 0.00 2.40
87 88 8.917088 ACTGGATTTTTGAGAGATTTTGAAGAA 58.083 29.630 0.00 0.00 0.00 2.52
88 89 8.469309 ACTGGATTTTTGAGAGATTTTGAAGA 57.531 30.769 0.00 0.00 0.00 2.87
89 90 8.975439 CAACTGGATTTTTGAGAGATTTTGAAG 58.025 33.333 0.00 0.00 0.00 3.02
90 91 8.694540 TCAACTGGATTTTTGAGAGATTTTGAA 58.305 29.630 0.00 0.00 0.00 2.69
91 92 8.236585 TCAACTGGATTTTTGAGAGATTTTGA 57.763 30.769 0.00 0.00 0.00 2.69
92 93 8.876275 TTCAACTGGATTTTTGAGAGATTTTG 57.124 30.769 0.00 0.00 33.36 2.44
93 94 9.702494 GATTCAACTGGATTTTTGAGAGATTTT 57.298 29.630 0.00 0.00 33.36 1.82
94 95 8.863086 TGATTCAACTGGATTTTTGAGAGATTT 58.137 29.630 0.00 0.00 33.36 2.17
95 96 8.413309 TGATTCAACTGGATTTTTGAGAGATT 57.587 30.769 0.00 0.00 33.36 2.40
96 97 8.413309 TTGATTCAACTGGATTTTTGAGAGAT 57.587 30.769 0.00 0.00 33.36 2.75
97 98 7.822161 TTGATTCAACTGGATTTTTGAGAGA 57.178 32.000 0.00 0.00 33.36 3.10
98 99 7.922278 TGTTTGATTCAACTGGATTTTTGAGAG 59.078 33.333 0.00 0.00 33.36 3.20
99 100 7.780064 TGTTTGATTCAACTGGATTTTTGAGA 58.220 30.769 0.00 0.00 33.36 3.27
100 101 8.492748 CATGTTTGATTCAACTGGATTTTTGAG 58.507 33.333 0.00 0.00 33.36 3.02
101 102 7.041916 GCATGTTTGATTCAACTGGATTTTTGA 60.042 33.333 0.00 0.00 0.00 2.69
102 103 7.073265 GCATGTTTGATTCAACTGGATTTTTG 58.927 34.615 0.00 0.00 0.00 2.44
103 104 6.205270 GGCATGTTTGATTCAACTGGATTTTT 59.795 34.615 0.00 0.00 0.00 1.94
104 105 5.702209 GGCATGTTTGATTCAACTGGATTTT 59.298 36.000 0.00 0.00 0.00 1.82
105 106 5.240121 GGCATGTTTGATTCAACTGGATTT 58.760 37.500 0.00 0.00 0.00 2.17
106 107 4.322953 GGGCATGTTTGATTCAACTGGATT 60.323 41.667 0.00 0.00 0.00 3.01
107 108 3.196254 GGGCATGTTTGATTCAACTGGAT 59.804 43.478 0.00 0.00 0.00 3.41
108 109 2.562298 GGGCATGTTTGATTCAACTGGA 59.438 45.455 0.00 0.00 0.00 3.86
109 110 2.564062 AGGGCATGTTTGATTCAACTGG 59.436 45.455 0.00 0.00 0.00 4.00
110 111 3.947910 AGGGCATGTTTGATTCAACTG 57.052 42.857 0.00 0.00 0.00 3.16
111 112 6.438425 AGATTTAGGGCATGTTTGATTCAACT 59.562 34.615 0.00 0.00 0.00 3.16
112 113 6.633856 AGATTTAGGGCATGTTTGATTCAAC 58.366 36.000 0.00 0.00 0.00 3.18
113 114 6.855763 AGATTTAGGGCATGTTTGATTCAA 57.144 33.333 0.00 0.00 0.00 2.69
114 115 6.436847 TCAAGATTTAGGGCATGTTTGATTCA 59.563 34.615 0.00 0.00 0.00 2.57
115 116 6.866480 TCAAGATTTAGGGCATGTTTGATTC 58.134 36.000 0.00 0.00 0.00 2.52
116 117 6.438425 ACTCAAGATTTAGGGCATGTTTGATT 59.562 34.615 0.00 0.00 0.00 2.57
117 118 5.954150 ACTCAAGATTTAGGGCATGTTTGAT 59.046 36.000 0.00 0.00 0.00 2.57
118 119 5.324409 ACTCAAGATTTAGGGCATGTTTGA 58.676 37.500 0.00 0.00 0.00 2.69
119 120 5.649782 ACTCAAGATTTAGGGCATGTTTG 57.350 39.130 0.00 0.00 0.00 2.93
120 121 6.485171 AGTACTCAAGATTTAGGGCATGTTT 58.515 36.000 0.00 0.00 0.00 2.83
121 122 6.067217 AGTACTCAAGATTTAGGGCATGTT 57.933 37.500 0.00 0.00 0.00 2.71
122 123 5.700402 AGTACTCAAGATTTAGGGCATGT 57.300 39.130 0.00 0.00 0.00 3.21
123 124 6.352516 AGAAGTACTCAAGATTTAGGGCATG 58.647 40.000 0.00 0.00 0.00 4.06
124 125 6.567602 AGAAGTACTCAAGATTTAGGGCAT 57.432 37.500 0.00 0.00 0.00 4.40
125 126 7.676683 ATAGAAGTACTCAAGATTTAGGGCA 57.323 36.000 0.00 0.00 0.00 5.36
126 127 8.831550 CAAATAGAAGTACTCAAGATTTAGGGC 58.168 37.037 0.00 0.00 0.00 5.19
127 128 9.892130 ACAAATAGAAGTACTCAAGATTTAGGG 57.108 33.333 0.00 0.00 0.00 3.53
138 139 9.465985 GGACTAGCAATACAAATAGAAGTACTC 57.534 37.037 0.00 0.00 0.00 2.59
139 140 8.978472 TGGACTAGCAATACAAATAGAAGTACT 58.022 33.333 0.00 0.00 0.00 2.73
140 141 9.250624 CTGGACTAGCAATACAAATAGAAGTAC 57.749 37.037 0.00 0.00 0.00 2.73
158 159 1.066858 ACAATGTCGGTGCTGGACTAG 60.067 52.381 0.00 0.00 35.45 2.57
159 160 0.973632 ACAATGTCGGTGCTGGACTA 59.026 50.000 0.00 0.00 35.45 2.59
160 161 0.108585 AACAATGTCGGTGCTGGACT 59.891 50.000 0.00 0.00 35.45 3.85
161 162 0.951558 AAACAATGTCGGTGCTGGAC 59.048 50.000 0.00 0.00 34.99 4.02
162 163 2.552599 TAAACAATGTCGGTGCTGGA 57.447 45.000 0.00 0.00 0.00 3.86
163 164 5.499139 AATATAAACAATGTCGGTGCTGG 57.501 39.130 0.00 0.00 0.00 4.85
164 165 7.693952 AGTAAATATAAACAATGTCGGTGCTG 58.306 34.615 0.00 0.00 0.00 4.41
165 166 7.859325 AGTAAATATAAACAATGTCGGTGCT 57.141 32.000 0.00 0.00 0.00 4.40
166 167 9.037737 TCTAGTAAATATAAACAATGTCGGTGC 57.962 33.333 0.00 0.00 0.00 5.01
215 216 9.473007 TCAAAAGGATATATGGTGAACATTTCA 57.527 29.630 0.00 0.00 41.03 2.69
216 217 9.956720 CTCAAAAGGATATATGGTGAACATTTC 57.043 33.333 0.00 0.00 41.03 2.17
217 218 8.917088 CCTCAAAAGGATATATGGTGAACATTT 58.083 33.333 0.00 0.00 46.67 2.32
218 219 8.469309 CCTCAAAAGGATATATGGTGAACATT 57.531 34.615 0.00 0.00 46.67 2.71
249 250 9.979897 TCCAACCTAACTATGTTACTAGTAAGA 57.020 33.333 15.68 14.93 31.70 2.10
251 252 9.193806 CCTCCAACCTAACTATGTTACTAGTAA 57.806 37.037 11.38 11.38 31.70 2.24
252 253 8.560039 TCCTCCAACCTAACTATGTTACTAGTA 58.440 37.037 0.00 0.00 31.70 1.82
253 254 7.416731 TCCTCCAACCTAACTATGTTACTAGT 58.583 38.462 0.00 0.00 33.34 2.57
254 255 7.893124 TCCTCCAACCTAACTATGTTACTAG 57.107 40.000 0.00 0.00 0.00 2.57
255 256 7.508296 GGATCCTCCAACCTAACTATGTTACTA 59.492 40.741 3.84 0.00 36.28 1.82
256 257 6.326843 GGATCCTCCAACCTAACTATGTTACT 59.673 42.308 3.84 0.00 36.28 2.24
257 258 6.099269 TGGATCCTCCAACCTAACTATGTTAC 59.901 42.308 14.23 0.00 45.00 2.50
258 259 6.206787 TGGATCCTCCAACCTAACTATGTTA 58.793 40.000 14.23 0.00 45.00 2.41
259 260 5.036916 TGGATCCTCCAACCTAACTATGTT 58.963 41.667 14.23 0.00 45.00 2.71
260 261 4.631234 TGGATCCTCCAACCTAACTATGT 58.369 43.478 14.23 0.00 45.00 2.29
281 282 7.542130 GCCTAAAGAAAACTATCACCAACAATG 59.458 37.037 0.00 0.00 0.00 2.82
282 283 7.232534 TGCCTAAAGAAAACTATCACCAACAAT 59.767 33.333 0.00 0.00 0.00 2.71
283 284 6.547880 TGCCTAAAGAAAACTATCACCAACAA 59.452 34.615 0.00 0.00 0.00 2.83
284 285 6.065374 TGCCTAAAGAAAACTATCACCAACA 58.935 36.000 0.00 0.00 0.00 3.33
285 286 6.206829 ACTGCCTAAAGAAAACTATCACCAAC 59.793 38.462 0.00 0.00 0.00 3.77
286 287 6.303839 ACTGCCTAAAGAAAACTATCACCAA 58.696 36.000 0.00 0.00 0.00 3.67
287 288 5.876357 ACTGCCTAAAGAAAACTATCACCA 58.124 37.500 0.00 0.00 0.00 4.17
288 289 6.819397 AACTGCCTAAAGAAAACTATCACC 57.181 37.500 0.00 0.00 0.00 4.02
289 290 9.989869 GATAAACTGCCTAAAGAAAACTATCAC 57.010 33.333 0.00 0.00 0.00 3.06
290 291 9.733556 TGATAAACTGCCTAAAGAAAACTATCA 57.266 29.630 0.00 0.00 0.00 2.15
294 295 9.740710 ACTATGATAAACTGCCTAAAGAAAACT 57.259 29.630 0.00 0.00 0.00 2.66
299 300 9.692749 CGATAACTATGATAAACTGCCTAAAGA 57.307 33.333 0.00 0.00 0.00 2.52
300 301 9.477484 ACGATAACTATGATAAACTGCCTAAAG 57.523 33.333 0.00 0.00 0.00 1.85
301 302 9.826574 AACGATAACTATGATAAACTGCCTAAA 57.173 29.630 0.00 0.00 0.00 1.85
302 303 9.826574 AAACGATAACTATGATAAACTGCCTAA 57.173 29.630 0.00 0.00 0.00 2.69
304 305 9.826574 TTAAACGATAACTATGATAAACTGCCT 57.173 29.630 0.00 0.00 0.00 4.75
318 319 9.046296 GTGATCATCAATCCTTAAACGATAACT 57.954 33.333 0.00 0.00 33.01 2.24
319 320 8.826710 TGTGATCATCAATCCTTAAACGATAAC 58.173 33.333 0.00 0.00 33.01 1.89
320 321 8.956533 TGTGATCATCAATCCTTAAACGATAA 57.043 30.769 0.00 0.00 33.01 1.75
322 323 9.730705 ATATGTGATCATCAATCCTTAAACGAT 57.269 29.630 0.00 0.00 35.70 3.73
364 365 2.733030 CTATATGTGTGTGCGCGCGC 62.733 60.000 45.02 45.02 42.35 6.86
365 366 1.199126 CTATATGTGTGTGCGCGCG 59.801 57.895 28.44 28.44 0.00 6.86
366 367 0.650512 AACTATATGTGTGTGCGCGC 59.349 50.000 27.26 27.26 0.00 6.86
367 368 1.658596 ACAACTATATGTGTGTGCGCG 59.341 47.619 0.00 0.00 30.82 6.86
368 369 3.038352 CACAACTATATGTGTGTGCGC 57.962 47.619 0.00 0.00 44.46 6.09
395 396 8.768019 GGTTCGCTAGTTAACGGATATATTTTT 58.232 33.333 0.00 0.00 0.00 1.94
396 397 8.146412 AGGTTCGCTAGTTAACGGATATATTTT 58.854 33.333 0.00 0.00 0.00 1.82
397 398 7.664758 AGGTTCGCTAGTTAACGGATATATTT 58.335 34.615 0.00 0.00 0.00 1.40
398 399 7.224522 AGGTTCGCTAGTTAACGGATATATT 57.775 36.000 0.00 0.00 0.00 1.28
399 400 6.830873 AGGTTCGCTAGTTAACGGATATAT 57.169 37.500 0.00 0.00 0.00 0.86
400 401 6.262944 TGAAGGTTCGCTAGTTAACGGATATA 59.737 38.462 0.00 0.00 0.00 0.86
401 402 5.068198 TGAAGGTTCGCTAGTTAACGGATAT 59.932 40.000 0.00 0.00 0.00 1.63
402 403 4.398988 TGAAGGTTCGCTAGTTAACGGATA 59.601 41.667 0.00 0.00 0.00 2.59
403 404 3.194116 TGAAGGTTCGCTAGTTAACGGAT 59.806 43.478 0.00 0.00 0.00 4.18
404 405 2.557924 TGAAGGTTCGCTAGTTAACGGA 59.442 45.455 0.00 0.00 0.00 4.69
405 406 2.665052 GTGAAGGTTCGCTAGTTAACGG 59.335 50.000 0.00 0.00 34.94 4.44
406 407 2.665052 GGTGAAGGTTCGCTAGTTAACG 59.335 50.000 0.00 0.00 37.80 3.18
407 408 3.656559 TGGTGAAGGTTCGCTAGTTAAC 58.343 45.455 0.00 0.00 37.80 2.01
408 409 3.306502 CCTGGTGAAGGTTCGCTAGTTAA 60.307 47.826 13.58 0.00 42.52 2.01
409 410 2.232941 CCTGGTGAAGGTTCGCTAGTTA 59.767 50.000 13.58 0.00 42.52 2.24
410 411 1.002087 CCTGGTGAAGGTTCGCTAGTT 59.998 52.381 13.58 0.00 42.52 2.24
411 412 0.608640 CCTGGTGAAGGTTCGCTAGT 59.391 55.000 13.58 0.00 42.52 2.57
412 413 0.108138 CCCTGGTGAAGGTTCGCTAG 60.108 60.000 9.11 9.11 45.78 3.42
413 414 0.543410 TCCCTGGTGAAGGTTCGCTA 60.543 55.000 3.43 0.00 45.78 4.26
414 415 1.831652 CTCCCTGGTGAAGGTTCGCT 61.832 60.000 3.43 0.00 45.78 4.93
415 416 1.376037 CTCCCTGGTGAAGGTTCGC 60.376 63.158 0.00 0.00 45.78 4.70
416 417 1.296715 CCTCCCTGGTGAAGGTTCG 59.703 63.158 0.00 0.00 45.78 3.95
417 418 1.134438 ACCCTCCCTGGTGAAGGTTC 61.134 60.000 6.35 0.00 45.78 3.62
418 419 1.072930 ACCCTCCCTGGTGAAGGTT 60.073 57.895 6.35 0.00 45.78 3.50
419 420 2.627135 ACCCTCCCTGGTGAAGGT 59.373 61.111 6.35 3.75 45.78 3.50
425 426 2.169810 AAATGCCACCCTCCCTGGT 61.170 57.895 0.00 0.00 39.96 4.00
426 427 1.683365 CAAATGCCACCCTCCCTGG 60.683 63.158 0.00 0.00 0.00 4.45
427 428 2.353610 GCAAATGCCACCCTCCCTG 61.354 63.158 0.00 0.00 34.31 4.45
428 429 2.037847 GCAAATGCCACCCTCCCT 59.962 61.111 0.00 0.00 34.31 4.20
429 430 3.451894 CGCAAATGCCACCCTCCC 61.452 66.667 0.00 0.00 37.91 4.30
430 431 1.976474 TTCGCAAATGCCACCCTCC 60.976 57.895 0.00 0.00 37.91 4.30
431 432 1.212751 GTTCGCAAATGCCACCCTC 59.787 57.895 0.00 0.00 37.91 4.30
432 433 2.625823 CGTTCGCAAATGCCACCCT 61.626 57.895 0.00 0.00 37.91 4.34
433 434 2.126502 CGTTCGCAAATGCCACCC 60.127 61.111 0.00 0.00 37.91 4.61
434 435 0.596341 AAACGTTCGCAAATGCCACC 60.596 50.000 0.00 0.00 37.91 4.61
435 436 1.204792 AAAACGTTCGCAAATGCCAC 58.795 45.000 0.00 0.00 37.91 5.01
436 437 2.605823 CCTAAAACGTTCGCAAATGCCA 60.606 45.455 0.00 0.00 37.91 4.92
437 438 1.982913 CCTAAAACGTTCGCAAATGCC 59.017 47.619 0.00 0.00 37.91 4.40
438 439 2.403698 CACCTAAAACGTTCGCAAATGC 59.596 45.455 0.00 0.00 37.78 3.56
439 440 2.977169 CCACCTAAAACGTTCGCAAATG 59.023 45.455 0.00 0.00 0.00 2.32
440 441 2.606065 GCCACCTAAAACGTTCGCAAAT 60.606 45.455 0.00 0.00 0.00 2.32
441 442 1.268640 GCCACCTAAAACGTTCGCAAA 60.269 47.619 0.00 0.00 0.00 3.68
442 443 0.308376 GCCACCTAAAACGTTCGCAA 59.692 50.000 0.00 0.00 0.00 4.85
443 444 0.814410 TGCCACCTAAAACGTTCGCA 60.814 50.000 0.00 0.00 0.00 5.10
444 445 0.519961 ATGCCACCTAAAACGTTCGC 59.480 50.000 0.00 0.00 0.00 4.70
445 446 2.981400 AATGCCACCTAAAACGTTCG 57.019 45.000 0.00 0.00 0.00 3.95
446 447 6.210796 ACTAAAAATGCCACCTAAAACGTTC 58.789 36.000 0.00 0.00 0.00 3.95
447 448 6.151663 ACTAAAAATGCCACCTAAAACGTT 57.848 33.333 0.00 0.00 0.00 3.99
448 449 5.777850 ACTAAAAATGCCACCTAAAACGT 57.222 34.783 0.00 0.00 0.00 3.99
449 450 8.024285 TCATAACTAAAAATGCCACCTAAAACG 58.976 33.333 0.00 0.00 0.00 3.60
450 451 9.353999 CTCATAACTAAAAATGCCACCTAAAAC 57.646 33.333 0.00 0.00 0.00 2.43
451 452 8.527810 CCTCATAACTAAAAATGCCACCTAAAA 58.472 33.333 0.00 0.00 0.00 1.52
452 453 7.123547 CCCTCATAACTAAAAATGCCACCTAAA 59.876 37.037 0.00 0.00 0.00 1.85
453 454 6.605594 CCCTCATAACTAAAAATGCCACCTAA 59.394 38.462 0.00 0.00 0.00 2.69
454 455 6.126409 CCCTCATAACTAAAAATGCCACCTA 58.874 40.000 0.00 0.00 0.00 3.08
455 456 4.956075 CCCTCATAACTAAAAATGCCACCT 59.044 41.667 0.00 0.00 0.00 4.00
456 457 4.099419 CCCCTCATAACTAAAAATGCCACC 59.901 45.833 0.00 0.00 0.00 4.61
457 458 4.953579 TCCCCTCATAACTAAAAATGCCAC 59.046 41.667 0.00 0.00 0.00 5.01
458 459 5.199982 TCCCCTCATAACTAAAAATGCCA 57.800 39.130 0.00 0.00 0.00 4.92
459 460 5.833131 TCATCCCCTCATAACTAAAAATGCC 59.167 40.000 0.00 0.00 0.00 4.40
460 461 6.321181 TGTCATCCCCTCATAACTAAAAATGC 59.679 38.462 0.00 0.00 0.00 3.56
461 462 7.557719 ACTGTCATCCCCTCATAACTAAAAATG 59.442 37.037 0.00 0.00 0.00 2.32
462 463 7.643123 ACTGTCATCCCCTCATAACTAAAAAT 58.357 34.615 0.00 0.00 0.00 1.82
463 464 7.027874 ACTGTCATCCCCTCATAACTAAAAA 57.972 36.000 0.00 0.00 0.00 1.94
464 465 6.636454 ACTGTCATCCCCTCATAACTAAAA 57.364 37.500 0.00 0.00 0.00 1.52
465 466 6.636454 AACTGTCATCCCCTCATAACTAAA 57.364 37.500 0.00 0.00 0.00 1.85
466 467 6.443849 AGAAACTGTCATCCCCTCATAACTAA 59.556 38.462 0.00 0.00 0.00 2.24
467 468 5.964477 AGAAACTGTCATCCCCTCATAACTA 59.036 40.000 0.00 0.00 0.00 2.24
468 469 4.785376 AGAAACTGTCATCCCCTCATAACT 59.215 41.667 0.00 0.00 0.00 2.24
469 470 5.104259 AGAAACTGTCATCCCCTCATAAC 57.896 43.478 0.00 0.00 0.00 1.89
470 471 5.250543 TGAAGAAACTGTCATCCCCTCATAA 59.749 40.000 0.00 0.00 0.00 1.90
471 472 4.782691 TGAAGAAACTGTCATCCCCTCATA 59.217 41.667 0.00 0.00 0.00 2.15
472 473 3.588842 TGAAGAAACTGTCATCCCCTCAT 59.411 43.478 0.00 0.00 0.00 2.90
473 474 2.978978 TGAAGAAACTGTCATCCCCTCA 59.021 45.455 0.00 0.00 0.00 3.86
474 475 3.261897 TCTGAAGAAACTGTCATCCCCTC 59.738 47.826 0.00 0.00 0.00 4.30
475 476 3.251484 TCTGAAGAAACTGTCATCCCCT 58.749 45.455 0.00 0.00 0.00 4.79
476 477 3.008485 ACTCTGAAGAAACTGTCATCCCC 59.992 47.826 0.00 0.00 0.00 4.81
477 478 3.999663 CACTCTGAAGAAACTGTCATCCC 59.000 47.826 0.00 0.00 0.00 3.85
478 479 4.688413 GTCACTCTGAAGAAACTGTCATCC 59.312 45.833 0.00 0.00 0.00 3.51
479 480 5.292765 TGTCACTCTGAAGAAACTGTCATC 58.707 41.667 0.00 0.00 0.00 2.92
480 481 5.282055 TGTCACTCTGAAGAAACTGTCAT 57.718 39.130 0.00 0.00 0.00 3.06
481 482 4.736126 TGTCACTCTGAAGAAACTGTCA 57.264 40.909 0.00 0.00 0.00 3.58
482 483 5.176590 GTCATGTCACTCTGAAGAAACTGTC 59.823 44.000 0.00 0.00 0.00 3.51
483 484 5.053145 GTCATGTCACTCTGAAGAAACTGT 58.947 41.667 0.00 0.00 0.00 3.55
484 485 5.052481 TGTCATGTCACTCTGAAGAAACTG 58.948 41.667 0.00 0.00 0.00 3.16
485 486 5.163364 ACTGTCATGTCACTCTGAAGAAACT 60.163 40.000 0.00 0.00 0.00 2.66
486 487 5.053145 ACTGTCATGTCACTCTGAAGAAAC 58.947 41.667 0.00 0.00 0.00 2.78
487 488 5.282055 ACTGTCATGTCACTCTGAAGAAA 57.718 39.130 0.00 0.00 0.00 2.52
488 489 4.944619 ACTGTCATGTCACTCTGAAGAA 57.055 40.909 0.00 0.00 0.00 2.52
489 490 4.944619 AACTGTCATGTCACTCTGAAGA 57.055 40.909 0.00 0.00 0.00 2.87
490 491 4.450419 GGAAACTGTCATGTCACTCTGAAG 59.550 45.833 0.00 0.00 0.00 3.02
491 492 4.101585 AGGAAACTGTCATGTCACTCTGAA 59.898 41.667 0.00 0.00 41.13 3.02
492 493 3.643320 AGGAAACTGTCATGTCACTCTGA 59.357 43.478 0.00 0.00 41.13 3.27
493 494 4.000331 AGGAAACTGTCATGTCACTCTG 58.000 45.455 0.00 0.00 41.13 3.35
494 495 4.636249 GAAGGAAACTGTCATGTCACTCT 58.364 43.478 0.00 0.00 42.68 3.24
495 496 3.430218 CGAAGGAAACTGTCATGTCACTC 59.570 47.826 0.00 0.00 42.68 3.51
496 497 3.069586 TCGAAGGAAACTGTCATGTCACT 59.930 43.478 0.00 0.00 42.68 3.41
497 498 3.390135 TCGAAGGAAACTGTCATGTCAC 58.610 45.455 0.00 0.00 42.68 3.67
498 499 3.320826 TCTCGAAGGAAACTGTCATGTCA 59.679 43.478 0.00 0.00 42.68 3.58
499 500 3.914312 TCTCGAAGGAAACTGTCATGTC 58.086 45.455 0.00 0.00 42.68 3.06
500 501 4.310769 CTTCTCGAAGGAAACTGTCATGT 58.689 43.478 0.00 0.00 42.68 3.21
501 502 4.917887 CTTCTCGAAGGAAACTGTCATG 57.082 45.455 0.00 0.00 42.68 3.07
527 528 7.988904 ATGACGGATGTTTTAAAACGAAAAA 57.011 28.000 22.57 8.27 41.74 1.94
528 529 7.988904 AATGACGGATGTTTTAAAACGAAAA 57.011 28.000 22.57 8.60 41.74 2.29
529 530 7.701078 TCAAATGACGGATGTTTTAAAACGAAA 59.299 29.630 22.57 8.93 41.74 3.46
530 531 7.194278 TCAAATGACGGATGTTTTAAAACGAA 58.806 30.769 22.57 9.59 41.74 3.85
531 532 6.726230 TCAAATGACGGATGTTTTAAAACGA 58.274 32.000 22.57 13.90 41.74 3.85
532 533 6.978024 TCAAATGACGGATGTTTTAAAACG 57.022 33.333 22.57 14.75 41.74 3.60
533 534 8.742554 AGATCAAATGACGGATGTTTTAAAAC 57.257 30.769 21.66 21.66 39.33 2.43
534 535 9.757227 AAAGATCAAATGACGGATGTTTTAAAA 57.243 25.926 0.00 0.00 34.50 1.52
535 536 9.405587 GAAAGATCAAATGACGGATGTTTTAAA 57.594 29.630 0.00 0.00 37.20 1.52
536 537 8.792633 AGAAAGATCAAATGACGGATGTTTTAA 58.207 29.630 0.00 0.00 37.20 1.52
537 538 8.335532 AGAAAGATCAAATGACGGATGTTTTA 57.664 30.769 0.00 0.00 37.20 1.52
538 539 7.219484 AGAAAGATCAAATGACGGATGTTTT 57.781 32.000 0.00 0.00 37.20 2.43
539 540 6.824305 AGAAAGATCAAATGACGGATGTTT 57.176 33.333 0.00 0.00 39.01 2.83
540 541 6.430925 TGAAGAAAGATCAAATGACGGATGTT 59.569 34.615 0.00 0.00 0.00 2.71
541 542 5.939883 TGAAGAAAGATCAAATGACGGATGT 59.060 36.000 0.00 0.00 0.00 3.06
542 543 6.128200 TGTGAAGAAAGATCAAATGACGGATG 60.128 38.462 0.00 0.00 0.00 3.51
543 544 5.939883 TGTGAAGAAAGATCAAATGACGGAT 59.060 36.000 0.00 0.00 0.00 4.18
544 545 5.304778 TGTGAAGAAAGATCAAATGACGGA 58.695 37.500 0.00 0.00 0.00 4.69
545 546 5.611796 TGTGAAGAAAGATCAAATGACGG 57.388 39.130 0.00 0.00 0.00 4.79
546 547 6.662616 AGTTGTGAAGAAAGATCAAATGACG 58.337 36.000 0.00 0.00 0.00 4.35
547 548 9.950680 TTAAGTTGTGAAGAAAGATCAAATGAC 57.049 29.630 0.00 0.00 0.00 3.06
553 554 9.052759 GGTAGTTTAAGTTGTGAAGAAAGATCA 57.947 33.333 0.00 0.00 0.00 2.92
554 555 9.052759 TGGTAGTTTAAGTTGTGAAGAAAGATC 57.947 33.333 0.00 0.00 0.00 2.75
555 556 8.974060 TGGTAGTTTAAGTTGTGAAGAAAGAT 57.026 30.769 0.00 0.00 0.00 2.40
556 557 8.974060 ATGGTAGTTTAAGTTGTGAAGAAAGA 57.026 30.769 0.00 0.00 0.00 2.52
557 558 8.836413 TGATGGTAGTTTAAGTTGTGAAGAAAG 58.164 33.333 0.00 0.00 0.00 2.62
558 559 8.740123 TGATGGTAGTTTAAGTTGTGAAGAAA 57.260 30.769 0.00 0.00 0.00 2.52
559 560 8.740123 TTGATGGTAGTTTAAGTTGTGAAGAA 57.260 30.769 0.00 0.00 0.00 2.52
560 561 8.740123 TTTGATGGTAGTTTAAGTTGTGAAGA 57.260 30.769 0.00 0.00 0.00 2.87
561 562 9.398170 CATTTGATGGTAGTTTAAGTTGTGAAG 57.602 33.333 0.00 0.00 0.00 3.02
562 563 9.126151 TCATTTGATGGTAGTTTAAGTTGTGAA 57.874 29.630 0.00 0.00 0.00 3.18
563 564 8.564574 GTCATTTGATGGTAGTTTAAGTTGTGA 58.435 33.333 0.00 0.00 0.00 3.58
564 565 7.533900 CGTCATTTGATGGTAGTTTAAGTTGTG 59.466 37.037 0.00 0.00 0.00 3.33
565 566 7.227910 ACGTCATTTGATGGTAGTTTAAGTTGT 59.772 33.333 4.88 0.00 35.43 3.32
566 567 7.581476 ACGTCATTTGATGGTAGTTTAAGTTG 58.419 34.615 4.88 0.00 35.43 3.16
567 568 7.739498 ACGTCATTTGATGGTAGTTTAAGTT 57.261 32.000 4.88 0.00 35.43 2.66
568 569 7.308348 CCAACGTCATTTGATGGTAGTTTAAGT 60.308 37.037 4.88 0.00 35.43 2.24
569 570 7.021196 CCAACGTCATTTGATGGTAGTTTAAG 58.979 38.462 4.88 0.00 35.43 1.85
570 571 6.568844 GCCAACGTCATTTGATGGTAGTTTAA 60.569 38.462 4.88 0.00 35.43 1.52
571 572 5.106475 GCCAACGTCATTTGATGGTAGTTTA 60.106 40.000 4.88 0.00 35.43 2.01
572 573 4.320935 GCCAACGTCATTTGATGGTAGTTT 60.321 41.667 4.88 0.00 35.43 2.66
573 574 3.190535 GCCAACGTCATTTGATGGTAGTT 59.809 43.478 4.88 0.00 35.43 2.24
574 575 2.747446 GCCAACGTCATTTGATGGTAGT 59.253 45.455 4.88 0.00 35.43 2.73
575 576 2.097466 GGCCAACGTCATTTGATGGTAG 59.903 50.000 0.00 0.00 35.43 3.18
576 577 2.088423 GGCCAACGTCATTTGATGGTA 58.912 47.619 0.00 0.00 35.43 3.25
577 578 0.887933 GGCCAACGTCATTTGATGGT 59.112 50.000 0.00 0.00 35.43 3.55
578 579 1.135315 CAGGCCAACGTCATTTGATGG 60.135 52.381 5.01 0.00 35.43 3.51
579 580 1.733389 GCAGGCCAACGTCATTTGATG 60.733 52.381 5.01 0.00 37.11 3.07
580 581 0.527565 GCAGGCCAACGTCATTTGAT 59.472 50.000 5.01 0.00 0.00 2.57
581 582 1.523154 GGCAGGCCAACGTCATTTGA 61.523 55.000 5.01 0.00 35.81 2.69
582 583 1.080569 GGCAGGCCAACGTCATTTG 60.081 57.895 5.01 0.00 35.81 2.32
583 584 1.530419 TGGCAGGCCAACGTCATTT 60.530 52.632 11.25 0.00 44.12 2.32
584 585 2.115052 TGGCAGGCCAACGTCATT 59.885 55.556 11.25 0.00 44.12 2.57
593 594 3.946126 GAAAGGGAGGTGGCAGGCC 62.946 68.421 2.62 2.62 0.00 5.19
594 595 2.361737 GAAAGGGAGGTGGCAGGC 60.362 66.667 0.00 0.00 0.00 4.85
595 596 1.001641 CTGAAAGGGAGGTGGCAGG 60.002 63.158 0.00 0.00 0.00 4.85
596 597 1.676967 GCTGAAAGGGAGGTGGCAG 60.677 63.158 0.00 0.00 0.00 4.85
597 598 2.005606 TTGCTGAAAGGGAGGTGGCA 62.006 55.000 0.00 0.00 0.00 4.92
598 599 0.827507 TTTGCTGAAAGGGAGGTGGC 60.828 55.000 0.00 0.00 0.00 5.01
599 600 0.961753 GTTTGCTGAAAGGGAGGTGG 59.038 55.000 0.00 0.00 0.00 4.61
600 601 1.691196 TGTTTGCTGAAAGGGAGGTG 58.309 50.000 0.00 0.00 0.00 4.00
601 602 2.158475 TGATGTTTGCTGAAAGGGAGGT 60.158 45.455 0.00 0.00 0.00 3.85
602 603 2.490903 CTGATGTTTGCTGAAAGGGAGG 59.509 50.000 0.00 0.00 0.00 4.30
603 604 2.094854 GCTGATGTTTGCTGAAAGGGAG 60.095 50.000 0.00 0.00 0.00 4.30
604 605 1.888512 GCTGATGTTTGCTGAAAGGGA 59.111 47.619 0.00 0.00 0.00 4.20
605 606 1.891150 AGCTGATGTTTGCTGAAAGGG 59.109 47.619 0.00 0.00 38.21 3.95
612 613 2.162681 GTTACCCAGCTGATGTTTGCT 58.837 47.619 17.39 0.00 40.54 3.91
613 614 1.885887 TGTTACCCAGCTGATGTTTGC 59.114 47.619 17.39 6.45 0.00 3.68
614 615 3.149196 ACTGTTACCCAGCTGATGTTTG 58.851 45.455 17.39 0.00 45.68 2.93
615 616 3.508845 ACTGTTACCCAGCTGATGTTT 57.491 42.857 17.39 0.00 45.68 2.83
616 617 3.307480 GGTACTGTTACCCAGCTGATGTT 60.307 47.826 17.39 0.00 45.68 2.71
617 618 2.236395 GGTACTGTTACCCAGCTGATGT 59.764 50.000 17.39 14.44 45.68 3.06
618 619 2.906354 GGTACTGTTACCCAGCTGATG 58.094 52.381 17.39 8.57 45.68 3.07
643 644 4.564769 CGGCCGTTGCACAATTATATTTTT 59.435 37.500 19.50 0.00 40.13 1.94
644 645 4.109050 CGGCCGTTGCACAATTATATTTT 58.891 39.130 19.50 0.00 40.13 1.82
645 646 3.490078 CCGGCCGTTGCACAATTATATTT 60.490 43.478 26.12 0.00 40.13 1.40
646 647 2.034053 CCGGCCGTTGCACAATTATATT 59.966 45.455 26.12 0.00 40.13 1.28
647 648 1.606668 CCGGCCGTTGCACAATTATAT 59.393 47.619 26.12 0.00 40.13 0.86
648 649 1.018148 CCGGCCGTTGCACAATTATA 58.982 50.000 26.12 0.00 40.13 0.98
649 650 0.678366 TCCGGCCGTTGCACAATTAT 60.678 50.000 26.12 0.00 40.13 1.28
650 651 0.678366 ATCCGGCCGTTGCACAATTA 60.678 50.000 26.12 0.00 40.13 1.40
651 652 1.933115 GATCCGGCCGTTGCACAATT 61.933 55.000 26.12 0.00 40.13 2.32
652 653 2.361104 ATCCGGCCGTTGCACAAT 60.361 55.556 26.12 2.65 40.13 2.71
653 654 3.053291 GATCCGGCCGTTGCACAA 61.053 61.111 26.12 0.06 40.13 3.33
655 656 4.778143 AGGATCCGGCCGTTGCAC 62.778 66.667 26.12 10.19 40.13 4.57
656 657 3.561120 AAAGGATCCGGCCGTTGCA 62.561 57.895 26.12 4.95 40.13 4.08
657 658 2.266376 GAAAAGGATCCGGCCGTTGC 62.266 60.000 26.12 16.46 29.93 4.17
658 659 1.800681 GAAAAGGATCCGGCCGTTG 59.199 57.895 26.12 10.11 29.93 4.10
659 660 1.743995 CGAAAAGGATCCGGCCGTT 60.744 57.895 26.12 11.50 0.00 4.44
660 661 2.125269 CGAAAAGGATCCGGCCGT 60.125 61.111 26.12 6.07 0.00 5.68
661 662 2.895372 CCGAAAAGGATCCGGCCG 60.895 66.667 21.04 21.04 45.00 6.13
662 663 2.112815 CACCGAAAAGGATCCGGCC 61.113 63.158 5.98 0.00 46.54 6.13
663 664 1.376812 ACACCGAAAAGGATCCGGC 60.377 57.895 5.98 0.00 46.54 6.13
665 666 1.644786 GGCACACCGAAAAGGATCCG 61.645 60.000 5.98 0.00 45.00 4.18
666 667 0.608035 TGGCACACCGAAAAGGATCC 60.608 55.000 2.48 2.48 45.00 3.36
667 668 1.200020 CTTGGCACACCGAAAAGGATC 59.800 52.381 0.00 0.00 45.00 3.36
668 669 1.247567 CTTGGCACACCGAAAAGGAT 58.752 50.000 0.00 0.00 45.00 3.24
669 670 0.821711 CCTTGGCACACCGAAAAGGA 60.822 55.000 0.00 0.00 45.00 3.36
671 672 1.007387 GCCTTGGCACACCGAAAAG 60.007 57.895 6.79 0.00 39.29 2.27
672 673 2.494530 GGCCTTGGCACACCGAAAA 61.495 57.895 14.04 0.00 39.29 2.29
673 674 2.058125 TAGGCCTTGGCACACCGAAA 62.058 55.000 12.58 0.00 39.29 3.46
674 675 2.463589 CTAGGCCTTGGCACACCGAA 62.464 60.000 12.58 0.00 39.29 4.30
675 676 2.925706 TAGGCCTTGGCACACCGA 60.926 61.111 12.58 0.00 39.29 4.69
676 677 2.436646 CTAGGCCTTGGCACACCG 60.437 66.667 12.58 0.00 39.29 4.94
677 678 2.751837 GCTAGGCCTTGGCACACC 60.752 66.667 12.58 0.00 39.29 4.16
678 679 2.751837 GGCTAGGCCTTGGCACAC 60.752 66.667 30.87 11.46 46.69 3.82
688 689 4.809070 CCATAAGCTGGGCTAGGC 57.191 61.111 8.00 8.00 41.82 3.93
696 697 1.276844 GCGCGCTTACCATAAGCTG 59.723 57.895 26.67 11.58 40.94 4.24
697 698 1.887707 GGCGCGCTTACCATAAGCT 60.888 57.895 32.29 0.00 40.94 3.74
698 699 2.631984 GGCGCGCTTACCATAAGC 59.368 61.111 32.29 5.91 39.77 3.09
699 700 0.032952 TAGGGCGCGCTTACCATAAG 59.967 55.000 32.72 0.00 0.00 1.73
700 701 0.464870 TTAGGGCGCGCTTACCATAA 59.535 50.000 32.72 18.71 30.22 1.90
701 702 0.682852 ATTAGGGCGCGCTTACCATA 59.317 50.000 32.72 13.37 0.00 2.74
702 703 0.602905 GATTAGGGCGCGCTTACCAT 60.603 55.000 32.72 18.30 0.00 3.55
703 704 1.227438 GATTAGGGCGCGCTTACCA 60.227 57.895 32.72 11.79 0.00 3.25
704 705 2.308039 CGATTAGGGCGCGCTTACC 61.308 63.158 32.72 23.63 0.00 2.85
705 706 2.939951 GCGATTAGGGCGCGCTTAC 61.940 63.158 32.72 20.93 46.53 2.34
706 707 2.660552 GCGATTAGGGCGCGCTTA 60.661 61.111 32.72 24.13 46.53 3.09
712 713 1.488527 GTTCTGTAGCGATTAGGGCG 58.511 55.000 0.00 0.00 35.00 6.13
713 714 1.488527 CGTTCTGTAGCGATTAGGGC 58.511 55.000 0.00 0.00 0.00 5.19
714 715 1.202371 TGCGTTCTGTAGCGATTAGGG 60.202 52.381 0.00 0.00 35.87 3.53
715 716 1.852895 GTGCGTTCTGTAGCGATTAGG 59.147 52.381 0.00 0.00 35.87 2.69
716 717 1.852895 GGTGCGTTCTGTAGCGATTAG 59.147 52.381 0.00 0.00 35.87 1.73
717 718 1.202817 TGGTGCGTTCTGTAGCGATTA 59.797 47.619 0.00 0.00 35.87 1.75
718 719 0.037697 TGGTGCGTTCTGTAGCGATT 60.038 50.000 0.00 0.00 35.87 3.34
719 720 0.037697 TTGGTGCGTTCTGTAGCGAT 60.038 50.000 0.00 0.00 35.87 4.58
720 721 0.666274 CTTGGTGCGTTCTGTAGCGA 60.666 55.000 0.00 0.00 35.87 4.93
721 722 0.666274 TCTTGGTGCGTTCTGTAGCG 60.666 55.000 0.00 0.00 35.87 4.26
722 723 1.461127 CTTCTTGGTGCGTTCTGTAGC 59.539 52.381 0.00 0.00 0.00 3.58
723 724 1.461127 GCTTCTTGGTGCGTTCTGTAG 59.539 52.381 0.00 0.00 0.00 2.74
724 725 1.508632 GCTTCTTGGTGCGTTCTGTA 58.491 50.000 0.00 0.00 0.00 2.74
725 726 1.166531 GGCTTCTTGGTGCGTTCTGT 61.167 55.000 0.00 0.00 0.00 3.41
726 727 1.576421 GGCTTCTTGGTGCGTTCTG 59.424 57.895 0.00 0.00 0.00 3.02
727 728 1.600916 GGGCTTCTTGGTGCGTTCT 60.601 57.895 0.00 0.00 0.00 3.01
728 729 2.626780 GGGGCTTCTTGGTGCGTTC 61.627 63.158 0.00 0.00 0.00 3.95
729 730 2.597510 GGGGCTTCTTGGTGCGTT 60.598 61.111 0.00 0.00 0.00 4.84
730 731 4.660938 GGGGGCTTCTTGGTGCGT 62.661 66.667 0.00 0.00 0.00 5.24
744 745 2.572209 TTTTAGGTGAAGTTCGGGGG 57.428 50.000 0.00 0.00 0.00 5.40
745 746 3.746940 TCTTTTTAGGTGAAGTTCGGGG 58.253 45.455 0.00 0.00 0.00 5.73
746 747 5.758924 CTTTCTTTTTAGGTGAAGTTCGGG 58.241 41.667 0.00 0.00 0.00 5.14
747 748 5.212934 GCTTTCTTTTTAGGTGAAGTTCGG 58.787 41.667 0.00 0.00 0.00 4.30
748 749 5.212934 GGCTTTCTTTTTAGGTGAAGTTCG 58.787 41.667 0.00 0.00 0.00 3.95
749 750 5.509163 GGGGCTTTCTTTTTAGGTGAAGTTC 60.509 44.000 0.00 0.00 0.00 3.01
750 751 4.344102 GGGGCTTTCTTTTTAGGTGAAGTT 59.656 41.667 0.00 0.00 0.00 2.66
751 752 3.895656 GGGGCTTTCTTTTTAGGTGAAGT 59.104 43.478 0.00 0.00 0.00 3.01
752 753 3.258372 GGGGGCTTTCTTTTTAGGTGAAG 59.742 47.826 0.00 0.00 0.00 3.02
753 754 3.236047 GGGGGCTTTCTTTTTAGGTGAA 58.764 45.455 0.00 0.00 0.00 3.18
754 755 2.884320 GGGGGCTTTCTTTTTAGGTGA 58.116 47.619 0.00 0.00 0.00 4.02
772 773 1.468506 CGGGAAGGTTTGTTTGGGGG 61.469 60.000 0.00 0.00 0.00 5.40
773 774 2.046108 CGGGAAGGTTTGTTTGGGG 58.954 57.895 0.00 0.00 0.00 4.96
774 775 1.365999 GCGGGAAGGTTTGTTTGGG 59.634 57.895 0.00 0.00 0.00 4.12
775 776 1.007849 CGCGGGAAGGTTTGTTTGG 60.008 57.895 0.00 0.00 0.00 3.28
776 777 1.660264 GCGCGGGAAGGTTTGTTTG 60.660 57.895 8.83 0.00 0.00 2.93
777 778 2.725641 GCGCGGGAAGGTTTGTTT 59.274 55.556 8.83 0.00 0.00 2.83
778 779 3.656045 CGCGCGGGAAGGTTTGTT 61.656 61.111 24.84 0.00 0.00 2.83
795 796 2.778679 GTCATGTCGCAGTTCCGC 59.221 61.111 0.00 0.00 0.00 5.54
796 797 1.406219 CTCGTCATGTCGCAGTTCCG 61.406 60.000 7.51 0.00 0.00 4.30
797 798 1.687494 GCTCGTCATGTCGCAGTTCC 61.687 60.000 7.51 0.00 0.00 3.62
798 799 1.008875 TGCTCGTCATGTCGCAGTTC 61.009 55.000 7.51 0.00 0.00 3.01
799 800 1.006220 TGCTCGTCATGTCGCAGTT 60.006 52.632 7.51 0.00 0.00 3.16
800 801 1.734477 GTGCTCGTCATGTCGCAGT 60.734 57.895 7.51 0.00 32.38 4.40
801 802 1.734117 TGTGCTCGTCATGTCGCAG 60.734 57.895 7.51 7.31 32.38 5.18
802 803 2.021584 GTGTGCTCGTCATGTCGCA 61.022 57.895 7.51 2.56 0.00 5.10
803 804 2.772189 GTGTGCTCGTCATGTCGC 59.228 61.111 7.51 0.00 0.00 5.19
804 805 2.436539 CCGTGTGCTCGTCATGTCG 61.437 63.158 5.98 5.98 0.00 4.35
805 806 0.458543 ATCCGTGTGCTCGTCATGTC 60.459 55.000 0.00 0.00 0.00 3.06
806 807 0.458543 GATCCGTGTGCTCGTCATGT 60.459 55.000 0.00 0.00 0.00 3.21
807 808 1.148157 GGATCCGTGTGCTCGTCATG 61.148 60.000 0.00 0.00 0.00 3.07
808 809 1.141881 GGATCCGTGTGCTCGTCAT 59.858 57.895 0.00 0.00 0.00 3.06
809 810 2.272447 TGGATCCGTGTGCTCGTCA 61.272 57.895 7.39 0.00 0.00 4.35
810 811 1.805945 GTGGATCCGTGTGCTCGTC 60.806 63.158 7.39 0.00 0.00 4.20
811 812 2.214181 GAGTGGATCCGTGTGCTCGT 62.214 60.000 7.39 0.00 0.00 4.18
812 813 1.517257 GAGTGGATCCGTGTGCTCG 60.517 63.158 7.39 0.00 0.00 5.03
813 814 1.153549 GGAGTGGATCCGTGTGCTC 60.154 63.158 7.39 9.02 38.67 4.26
814 815 2.982130 GGAGTGGATCCGTGTGCT 59.018 61.111 7.39 0.00 38.67 4.40
845 846 2.814336 GGATTTAATGGACGGCTGGATC 59.186 50.000 0.00 0.00 0.00 3.36
860 861 3.434453 GGGATGTGGGATCGTTGGATTTA 60.434 47.826 0.00 0.00 31.51 1.40
909 910 1.296715 GGCGTGATTGGTGGAGACT 59.703 57.895 0.00 0.00 0.00 3.24
910 911 1.745489 GGGCGTGATTGGTGGAGAC 60.745 63.158 0.00 0.00 0.00 3.36
929 930 1.568504 ATATATGGGGGTGCGTCGAT 58.431 50.000 0.00 0.00 0.00 3.59
932 933 1.722011 CGAATATATGGGGGTGCGTC 58.278 55.000 0.00 0.00 0.00 5.19
933 934 0.321298 GCGAATATATGGGGGTGCGT 60.321 55.000 0.00 0.00 0.00 5.24
960 961 0.321387 GTTCTGGGTTTCGGAGGACC 60.321 60.000 4.54 4.54 34.28 4.46
976 977 0.741915 TTGCGTTGGGGTTTGAGTTC 59.258 50.000 0.00 0.00 0.00 3.01
1005 1017 3.911155 GAAGGTTGCAACGCGCGAG 62.911 63.158 39.36 27.94 46.97 5.03
1006 1018 4.007940 GAAGGTTGCAACGCGCGA 62.008 61.111 39.36 11.73 46.97 5.87
1013 1030 0.897863 CGGATTGGGGAAGGTTGCAA 60.898 55.000 0.00 0.00 0.00 4.08
1014 1031 1.304052 CGGATTGGGGAAGGTTGCA 60.304 57.895 0.00 0.00 0.00 4.08
1090 1117 3.311110 ACCGGCTTCTTCTCCGCA 61.311 61.111 0.00 0.00 44.01 5.69
1472 1508 1.471119 TAAGAGATTCAGGCGACGGT 58.529 50.000 0.00 0.00 0.00 4.83
1494 1534 1.886542 AGGAACATTCGGAACAAAGCC 59.113 47.619 0.00 0.00 0.00 4.35
1513 1553 3.578716 ACCCCCTATGATTGACGACATAG 59.421 47.826 0.00 0.00 42.93 2.23
1538 1578 6.938698 TTACACTGTCTGTAAAGGGGAATA 57.061 37.500 0.00 0.00 41.54 1.75
1600 3204 2.732597 GCAAGGCACGTTTGTAACAACA 60.733 45.455 0.82 0.00 0.00 3.33
1718 3360 3.512724 AGCAGCTTAATCAAACAAGGCAT 59.487 39.130 0.00 0.00 0.00 4.40
1723 3365 2.487762 CCGGAGCAGCTTAATCAAACAA 59.512 45.455 0.00 0.00 0.00 2.83
2090 4872 7.542477 ACAGAGTTAAATCAAGACATACGTCAG 59.458 37.037 5.62 0.00 45.23 3.51
2158 4968 0.106868 TGGCAGCCAATCATCTCAGG 60.107 55.000 13.33 0.00 0.00 3.86
2159 4969 1.404391 GTTGGCAGCCAATCATCTCAG 59.596 52.381 29.79 0.00 45.80 3.35
2345 6835 1.580942 CACTGGGTTGGATTGCACG 59.419 57.895 0.00 0.00 0.00 5.34
2346 6836 1.181098 AGCACTGGGTTGGATTGCAC 61.181 55.000 0.00 0.00 35.57 4.57
2347 6837 1.153524 AGCACTGGGTTGGATTGCA 59.846 52.632 0.00 0.00 35.57 4.08
2348 6838 0.895100 TCAGCACTGGGTTGGATTGC 60.895 55.000 0.00 0.00 0.00 3.56
2426 6916 7.461918 GTTCGAATCAAACTTATTGGGAGTAC 58.538 38.462 0.00 0.00 0.00 2.73
2432 6922 8.447787 AAAATCGTTCGAATCAAACTTATTGG 57.552 30.769 0.00 0.00 0.00 3.16
2473 6964 4.508124 GTCGTACAGGGCTAGAAATTCATG 59.492 45.833 0.00 0.00 0.00 3.07
2540 7031 3.003763 AGCTGGACTTCCGGGGTC 61.004 66.667 16.52 16.52 42.72 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.