Multiple sequence alignment - TraesCS3B01G388100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G388100 chr3B 100.000 4891 0 0 1 4891 610747919 610752809 0.000000e+00 9033
1 TraesCS3B01G388100 chr3D 95.450 4879 172 17 24 4869 460495948 460500809 0.000000e+00 7734
2 TraesCS3B01G388100 chr3D 92.308 169 12 1 27 194 498707907 498707739 6.330000e-59 239
3 TraesCS3B01G388100 chr3A 96.150 2961 99 8 1922 4869 602918150 602921108 0.000000e+00 4822
4 TraesCS3B01G388100 chr3A 92.290 1738 95 18 197 1902 602916446 602918176 0.000000e+00 2431
5 TraesCS3B01G388100 chr3A 92.273 440 33 1 28 466 602913780 602914219 1.490000e-174 623
6 TraesCS3B01G388100 chr7B 91.071 168 13 2 27 193 67668230 67668396 4.930000e-55 226
7 TraesCS3B01G388100 chr2B 89.941 169 16 1 27 195 36628131 36627964 2.960000e-52 217
8 TraesCS3B01G388100 chr5D 85.629 167 18 5 30 193 490755723 490755886 2.340000e-38 171
9 TraesCS3B01G388100 chr7D 95.918 98 4 0 104 201 110317156 110317059 5.070000e-35 159
10 TraesCS3B01G388100 chr6D 93.396 106 6 1 101 205 60644723 60644828 6.550000e-34 156
11 TraesCS3B01G388100 chr4D 92.593 108 6 1 91 198 505493849 505493954 2.360000e-33 154
12 TraesCS3B01G388100 chr6B 91.304 92 7 1 2372 2462 66015851 66015760 1.850000e-24 124
13 TraesCS3B01G388100 chrUn 91.209 91 7 1 2373 2462 392729870 392729960 6.650000e-24 122
14 TraesCS3B01G388100 chrUn 92.941 85 5 1 2379 2462 420601281 420601197 6.650000e-24 122
15 TraesCS3B01G388100 chr5B 91.209 91 7 1 2373 2462 581597352 581597442 6.650000e-24 122
16 TraesCS3B01G388100 chr5A 92.941 85 5 1 2379 2462 67169545 67169461 6.650000e-24 122
17 TraesCS3B01G388100 chr1B 92.941 85 5 1 2379 2462 183642079 183641995 6.650000e-24 122
18 TraesCS3B01G388100 chr1B 91.209 91 7 1 2373 2462 278721980 278722070 6.650000e-24 122
19 TraesCS3B01G388100 chr1B 92.453 53 2 2 96 148 477413229 477413179 1.890000e-09 75


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G388100 chr3B 610747919 610752809 4890 False 9033.000000 9033 100.000 1 4891 1 chr3B.!!$F1 4890
1 TraesCS3B01G388100 chr3D 460495948 460500809 4861 False 7734.000000 7734 95.450 24 4869 1 chr3D.!!$F1 4845
2 TraesCS3B01G388100 chr3A 602913780 602921108 7328 False 2625.333333 4822 93.571 28 4869 3 chr3A.!!$F1 4841

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
732 3264 0.246635 TCTCACCTTTAGCGTCTGCC 59.753 55.000 0.0 0.0 44.31 4.85 F
905 3438 1.001860 CCAATTCGCAACAAATGGGGT 59.998 47.619 0.0 0.0 42.03 4.95 F
1200 3733 1.007238 CCCTACCTCTTCTCCCTGTCA 59.993 57.143 0.0 0.0 0.00 3.58 F
1461 3994 1.025113 TCGAGCTTCTCCGACACGAT 61.025 55.000 0.0 0.0 0.00 3.73 F
1879 4413 2.433868 TTGACACTGCCTTAGACGAC 57.566 50.000 0.0 0.0 0.00 4.34 F
3338 5878 1.339631 TGATAGGTTTGTTCGCAGGGG 60.340 52.381 0.0 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1990 4527 4.764823 GGTTCCCATGACATTTGTCTTGTA 59.235 41.667 19.27 9.09 44.14 2.41 R
2061 4598 6.017109 CACCATAAACTTCACTTGTGCTAGTT 60.017 38.462 12.12 12.12 0.00 2.24 R
3176 5713 5.356882 TTGTTTCATCCAAGTTCATCGAC 57.643 39.130 0.00 0.00 0.00 4.20 R
3220 5757 2.094494 TGGTCAAACAAAAAGCGCAAGA 60.094 40.909 11.47 0.00 43.02 3.02 R
3755 6297 3.523792 TCTCATATGGGGATCATCAGCA 58.476 45.455 1.90 0.00 37.30 4.41 R
4674 7226 0.603707 CTGGCACTGTGACCGTGATT 60.604 55.000 11.84 0.00 34.35 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 5.356470 GCCTTAGAGATGTTCTTCTTTGCAT 59.644 40.000 0.00 0.00 37.36 3.96
78 79 4.007659 TCTTGTATCCCTTTTTCCGCTTC 58.992 43.478 0.00 0.00 0.00 3.86
83 84 0.251165 CCCTTTTTCCGCTTCCTCCA 60.251 55.000 0.00 0.00 0.00 3.86
90 91 0.960364 TCCGCTTCCTCCATTTGTGC 60.960 55.000 0.00 0.00 0.00 4.57
115 116 1.284491 TGCTTCCATGTAATCCTGGCA 59.716 47.619 0.00 0.00 32.30 4.92
241 243 9.040939 GGTGACTAACAAAAAGCACAATAAAAT 57.959 29.630 0.00 0.00 0.00 1.82
243 245 9.809096 TGACTAACAAAAAGCACAATAAAATGA 57.191 25.926 0.00 0.00 0.00 2.57
298 300 6.146021 GTGACGTATATTTTATTGGTACCCCG 59.854 42.308 10.07 0.00 0.00 5.73
301 303 7.151976 ACGTATATTTTATTGGTACCCCGTAC 58.848 38.462 10.07 0.00 38.19 3.67
303 305 7.655328 CGTATATTTTATTGGTACCCCGTACAA 59.345 37.037 10.07 0.00 40.41 2.41
378 380 6.981722 AGGTAACATCCAAAGCACTTTAAAG 58.018 36.000 13.76 13.76 41.41 1.85
397 399 9.213799 CTTTAAAGCTTATCTCATGGAGGTATC 57.786 37.037 0.00 0.00 0.00 2.24
440 2939 8.471457 CCGAATGCAAATTTGAACTAAATATCG 58.529 33.333 22.31 14.69 38.01 2.92
511 3017 7.066284 GCACTAATATGGACACATCAACTTTCT 59.934 37.037 0.00 0.00 38.53 2.52
732 3264 0.246635 TCTCACCTTTAGCGTCTGCC 59.753 55.000 0.00 0.00 44.31 4.85
744 3276 1.927895 CGTCTGCCCAACATCTAGAC 58.072 55.000 0.00 0.00 35.58 2.59
778 3311 8.630054 TGCTTTTATATGTTTGTGGAGTAACT 57.370 30.769 0.00 0.00 0.00 2.24
863 3396 8.664211 ACAAAGTTGTTTCCACTTTTTAACAA 57.336 26.923 0.00 0.00 38.47 2.83
903 3436 1.077915 GCCAATTCGCAACAAATGGG 58.922 50.000 0.00 0.00 43.06 4.00
905 3438 1.001860 CCAATTCGCAACAAATGGGGT 59.998 47.619 0.00 0.00 42.03 4.95
947 3480 1.074951 CGTTTTCTTGGCCTCCCCT 59.925 57.895 3.32 0.00 0.00 4.79
972 3505 2.043852 AACCCACCGCACCAAACA 60.044 55.556 0.00 0.00 0.00 2.83
976 3509 3.959975 CACCGCACCAAACACCGG 61.960 66.667 0.00 0.00 45.80 5.28
1146 3679 1.378778 CCTCTTCGTCCTCCTCGGT 60.379 63.158 0.00 0.00 0.00 4.69
1200 3733 1.007238 CCCTACCTCTTCTCCCTGTCA 59.993 57.143 0.00 0.00 0.00 3.58
1240 3773 1.561542 GAAGCCCCATCTTCTCCTTCA 59.438 52.381 0.00 0.00 39.39 3.02
1254 3787 4.351938 TTCACCGGCCACTCGTCG 62.352 66.667 0.00 0.00 0.00 5.12
1449 3982 3.576232 AACCCCAGGTTCGAGCTT 58.424 55.556 0.00 0.00 43.05 3.74
1455 3988 1.595993 CCAGGTTCGAGCTTCTCCGA 61.596 60.000 0.00 0.00 0.00 4.55
1461 3994 1.025113 TCGAGCTTCTCCGACACGAT 61.025 55.000 0.00 0.00 0.00 3.73
1765 4299 3.873952 AGGAGCGCTCTGTTTCATTAATC 59.126 43.478 34.46 14.56 0.00 1.75
1805 4339 5.422012 AGAAAACCTACATTTGCAATAGGGG 59.578 40.000 22.62 15.74 39.96 4.79
1879 4413 2.433868 TTGACACTGCCTTAGACGAC 57.566 50.000 0.00 0.00 0.00 4.34
2061 4598 2.623878 TCGGTGCAAGGTTCTTGTTA 57.376 45.000 9.07 0.00 0.00 2.41
2340 4877 9.756571 ATTATCTAGTTATATCCACTCCGTCTT 57.243 33.333 0.00 0.00 0.00 3.01
2390 4927 7.933223 AGGAAAATAATAATCCCTCGATCCAT 58.067 34.615 0.00 0.00 33.55 3.41
2468 5005 5.105269 TGGATCGCAGGTAGTATTTTGTACA 60.105 40.000 0.00 0.00 0.00 2.90
3072 5609 7.488792 GTGCAATATTCTTGTTGTGCATTGATA 59.511 33.333 0.00 0.00 43.25 2.15
3220 5757 7.749539 CAAAATGTTTTGTCCGTAGAAACTT 57.250 32.000 9.48 0.00 41.87 2.66
3225 5765 4.806342 TTTGTCCGTAGAAACTTCTTGC 57.194 40.909 0.00 0.00 38.70 4.01
3337 5877 2.107950 TGATAGGTTTGTTCGCAGGG 57.892 50.000 0.00 0.00 0.00 4.45
3338 5878 1.339631 TGATAGGTTTGTTCGCAGGGG 60.340 52.381 0.00 0.00 0.00 4.79
3343 5883 1.343142 GGTTTGTTCGCAGGGGAAAAT 59.657 47.619 0.00 0.00 0.00 1.82
3354 5894 3.823304 GCAGGGGAAAATATAGCTTCAGG 59.177 47.826 0.00 0.00 0.00 3.86
3755 6297 4.101430 ACAATTGAATTCAAGCCCAACACT 59.899 37.500 24.17 3.41 39.47 3.55
3891 6433 5.447818 CGCAAAAGGATCTTGGATGAGTAAC 60.448 44.000 0.00 0.00 0.00 2.50
3918 6460 6.054295 AGGCAACACTGAGATGAATCTATTC 58.946 40.000 0.00 0.00 36.56 1.75
3976 6518 4.474651 TCACCAACTGGATCCATTCAGTAT 59.525 41.667 16.63 0.00 42.67 2.12
4254 6796 0.748450 TCTCGTTCCTTCGGTGTGTT 59.252 50.000 0.00 0.00 0.00 3.32
4265 6807 1.661617 TCGGTGTGTTTTGAACTGTCG 59.338 47.619 0.00 0.00 0.00 4.35
4266 6808 1.267832 CGGTGTGTTTTGAACTGTCGG 60.268 52.381 0.00 0.00 0.00 4.79
4338 6881 4.641541 TGATTTGCAGAATGGTATGTGAGG 59.358 41.667 0.00 0.00 35.86 3.86
4539 7091 3.616076 CGAAGAACCTGATGCTGTCTTCT 60.616 47.826 9.35 0.00 32.46 2.85
4674 7226 2.338620 CCGTGGAACTGCTCGTCA 59.661 61.111 0.00 0.00 31.75 4.35
4676 7228 0.670546 CCGTGGAACTGCTCGTCAAT 60.671 55.000 0.00 0.00 31.75 2.57
4677 7229 0.716108 CGTGGAACTGCTCGTCAATC 59.284 55.000 0.00 0.00 31.75 2.67
4692 7244 0.884259 CAATCACGGTCACAGTGCCA 60.884 55.000 2.74 0.00 39.31 4.92
4695 7247 4.626081 ACGGTCACAGTGCCAGGC 62.626 66.667 3.66 3.66 0.00 4.85
4698 7250 4.314440 GTCACAGTGCCAGGCCGA 62.314 66.667 9.64 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.664333 CGTTTGGTTGCCCACATGC 60.664 57.895 0.00 0.00 41.67 4.06
1 2 0.597118 CACGTTTGGTTGCCCACATG 60.597 55.000 0.00 0.00 41.67 3.21
2 3 1.739049 CACGTTTGGTTGCCCACAT 59.261 52.632 0.00 0.00 41.67 3.21
3 4 3.069980 GCACGTTTGGTTGCCCACA 62.070 57.895 0.00 0.00 41.67 4.17
4 5 2.279186 GCACGTTTGGTTGCCCAC 60.279 61.111 0.00 0.00 41.67 4.61
5 6 3.532155 GGCACGTTTGGTTGCCCA 61.532 61.111 0.87 0.00 39.65 5.36
7 8 1.862602 CTAGGGCACGTTTGGTTGCC 61.863 60.000 3.92 3.92 40.17 4.52
8 9 1.170290 ACTAGGGCACGTTTGGTTGC 61.170 55.000 0.00 0.00 0.00 4.17
9 10 1.001815 CAACTAGGGCACGTTTGGTTG 60.002 52.381 0.00 0.00 0.00 3.77
10 11 1.314730 CAACTAGGGCACGTTTGGTT 58.685 50.000 0.00 0.00 0.00 3.67
11 12 0.181824 ACAACTAGGGCACGTTTGGT 59.818 50.000 0.00 0.00 0.00 3.67
12 13 1.001815 CAACAACTAGGGCACGTTTGG 60.002 52.381 0.00 0.00 0.00 3.28
13 14 1.599419 GCAACAACTAGGGCACGTTTG 60.599 52.381 0.00 0.00 0.00 2.93
14 15 0.666374 GCAACAACTAGGGCACGTTT 59.334 50.000 0.00 0.00 0.00 3.60
15 16 1.170290 GGCAACAACTAGGGCACGTT 61.170 55.000 0.00 0.00 0.00 3.99
16 17 1.599797 GGCAACAACTAGGGCACGT 60.600 57.895 0.00 0.00 0.00 4.49
17 18 0.889186 AAGGCAACAACTAGGGCACG 60.889 55.000 0.00 0.00 41.41 5.34
18 19 2.084546 CTAAGGCAACAACTAGGGCAC 58.915 52.381 0.00 0.00 41.41 5.01
19 20 1.982226 TCTAAGGCAACAACTAGGGCA 59.018 47.619 0.00 0.00 41.41 5.36
20 21 2.236395 TCTCTAAGGCAACAACTAGGGC 59.764 50.000 0.00 0.00 41.41 5.19
21 22 4.080863 ACATCTCTAAGGCAACAACTAGGG 60.081 45.833 0.00 0.00 41.41 3.53
22 23 5.091261 ACATCTCTAAGGCAACAACTAGG 57.909 43.478 0.00 0.00 41.41 3.02
56 57 3.713826 AGCGGAAAAAGGGATACAAGA 57.286 42.857 0.00 0.00 39.74 3.02
78 79 1.717194 GCAACATGCACAAATGGAGG 58.283 50.000 0.00 0.00 44.26 4.30
115 116 6.418057 TTGAATTAACAAAGCCATCAACCT 57.582 33.333 0.00 0.00 0.00 3.50
217 219 9.809096 TCATTTTATTGTGCTTTTTGTTAGTCA 57.191 25.926 0.00 0.00 0.00 3.41
241 243 7.779326 TGTCAATATCCATTTCATTAGCCTTCA 59.221 33.333 0.00 0.00 0.00 3.02
243 245 7.014615 GGTGTCAATATCCATTTCATTAGCCTT 59.985 37.037 0.00 0.00 0.00 4.35
298 300 2.350102 GGTTTTAGCTGGCGTGTTGTAC 60.350 50.000 0.00 0.00 0.00 2.90
301 303 0.665835 TGGTTTTAGCTGGCGTGTTG 59.334 50.000 0.00 0.00 0.00 3.33
303 305 1.394618 TTTGGTTTTAGCTGGCGTGT 58.605 45.000 0.00 0.00 0.00 4.49
378 380 5.936956 CCAAAGATACCTCCATGAGATAAGC 59.063 44.000 0.00 0.00 0.00 3.09
397 399 0.593128 CGGTGCCAAACTCTCCAAAG 59.407 55.000 0.00 0.00 0.00 2.77
440 2939 9.827411 GATGAGGAAGTTTGTATTGTAAGTTTC 57.173 33.333 0.00 0.00 0.00 2.78
447 2946 8.784043 GTGTTTAGATGAGGAAGTTTGTATTGT 58.216 33.333 0.00 0.00 0.00 2.71
511 3017 4.023291 AGAGTTTGGAGAGGCAAACAAAA 58.977 39.130 1.99 0.00 42.04 2.44
674 3206 7.601073 TCAATGCTAAAAGATGTGAGTGTAG 57.399 36.000 0.00 0.00 0.00 2.74
732 3264 1.548719 TCCGTGTGGTCTAGATGTTGG 59.451 52.381 0.00 0.00 36.30 3.77
744 3276 5.499139 AACATATAAAAGCATCCGTGTGG 57.501 39.130 0.00 0.00 0.00 4.17
778 3311 0.101040 ACTCGACGACAAAACCACGA 59.899 50.000 0.00 0.00 0.00 4.35
884 3417 1.077915 CCCATTTGTTGCGAATTGGC 58.922 50.000 5.36 5.36 0.00 4.52
905 3438 1.141254 TCAAGTGTGCGAAAAGGGGTA 59.859 47.619 0.00 0.00 0.00 3.69
912 3445 0.529773 ACGAGCTCAAGTGTGCGAAA 60.530 50.000 15.40 0.00 39.31 3.46
913 3446 0.529773 AACGAGCTCAAGTGTGCGAA 60.530 50.000 15.40 0.00 39.31 4.70
947 3480 4.947147 GCGGTGGGTTGCTGGTGA 62.947 66.667 0.00 0.00 0.00 4.02
1200 3733 4.974438 TCGGTGGGGTTGGAGGCT 62.974 66.667 0.00 0.00 0.00 4.58
1221 3754 1.283321 GTGAAGGAGAAGATGGGGCTT 59.717 52.381 0.00 0.00 0.00 4.35
1461 3994 1.945354 GAAGGATGGGCTCGACGACA 61.945 60.000 0.00 0.00 0.00 4.35
1765 4299 6.981722 AGGTTTTCTATGCAAAAAGTGGTAG 58.018 36.000 0.00 0.00 0.00 3.18
1805 4339 5.823045 AGACAATTATTTGTTCGAGATCCCC 59.177 40.000 4.59 0.00 46.01 4.81
1879 4413 4.974368 ATAAGAGAACTCTCACGACTGG 57.026 45.455 9.34 0.00 45.21 4.00
1884 4418 8.522178 AGTTACAAAATAAGAGAACTCTCACG 57.478 34.615 9.34 0.00 45.21 4.35
1990 4527 4.764823 GGTTCCCATGACATTTGTCTTGTA 59.235 41.667 19.27 9.09 44.14 2.41
2061 4598 6.017109 CACCATAAACTTCACTTGTGCTAGTT 60.017 38.462 12.12 12.12 0.00 2.24
2340 4877 7.862512 AATTATAACATAAACCCGGTCGAAA 57.137 32.000 0.00 0.00 0.00 3.46
2374 4911 8.380742 ACACTTATTATGGATCGAGGGATTAT 57.619 34.615 0.00 0.00 31.51 1.28
2390 4927 6.202937 CGGTTCAAAACTGCAACACTTATTA 58.797 36.000 0.00 0.00 0.00 0.98
2468 5005 8.616799 AGGAAAATCTTACAGGATCTAAGAGT 57.383 34.615 8.40 3.99 34.46 3.24
2930 5467 6.440647 GGATACCCATGAGACATATAGGTCAA 59.559 42.308 18.93 7.71 40.29 3.18
3072 5609 8.397575 ACGAGTATATATGAACACATGAGACT 57.602 34.615 0.00 0.00 0.00 3.24
3176 5713 5.356882 TTGTTTCATCCAAGTTCATCGAC 57.643 39.130 0.00 0.00 0.00 4.20
3218 5755 3.000222 GGTCAAACAAAAAGCGCAAGAAG 60.000 43.478 11.47 0.00 43.02 2.85
3219 5756 2.926838 GGTCAAACAAAAAGCGCAAGAA 59.073 40.909 11.47 0.00 43.02 2.52
3220 5757 2.094494 TGGTCAAACAAAAAGCGCAAGA 60.094 40.909 11.47 0.00 43.02 3.02
3225 5765 7.593273 TGAATACTATTGGTCAAACAAAAAGCG 59.407 33.333 0.00 0.00 33.48 4.68
3337 5877 9.521503 GACAAAAATCCTGAAGCTATATTTTCC 57.478 33.333 0.00 0.00 30.61 3.13
3343 5883 7.362056 GCAACAGACAAAAATCCTGAAGCTATA 60.362 37.037 0.00 0.00 32.77 1.31
3354 5894 8.579682 AAAAGTAGATGCAACAGACAAAAATC 57.420 30.769 0.00 0.00 0.00 2.17
3755 6297 3.523792 TCTCATATGGGGATCATCAGCA 58.476 45.455 1.90 0.00 37.30 4.41
3891 6433 2.189594 TCATCTCAGTGTTGCCTTGG 57.810 50.000 0.00 0.00 0.00 3.61
3918 6460 0.729116 ATTCGCAGCATTCAGAACCG 59.271 50.000 0.00 0.00 0.00 4.44
3976 6518 8.714179 CAAGGTCGTTATACAAACACAGAATTA 58.286 33.333 0.00 0.00 0.00 1.40
4092 6634 6.187727 ACAACCTCTTCACCTATCTTTCAA 57.812 37.500 0.00 0.00 0.00 2.69
4254 6796 4.395959 ACTTGTAGACCGACAGTTCAAA 57.604 40.909 0.00 0.00 0.00 2.69
4320 6863 1.561076 AGCCTCACATACCATTCTGCA 59.439 47.619 0.00 0.00 0.00 4.41
4338 6881 0.884704 TCAAGTGAAGGCCGTGAAGC 60.885 55.000 0.00 0.00 0.00 3.86
4674 7226 0.603707 CTGGCACTGTGACCGTGATT 60.604 55.000 11.84 0.00 34.35 2.57
4676 7228 2.421314 CTGGCACTGTGACCGTGA 59.579 61.111 11.84 0.00 34.35 4.35
4677 7229 2.666190 CCTGGCACTGTGACCGTG 60.666 66.667 11.84 2.59 35.53 4.94
4704 7256 3.241530 ACCTTGACGCTGCCTGGA 61.242 61.111 0.00 0.00 0.00 3.86
4770 7322 1.002502 CCCTTCCTCGAAACACCCC 60.003 63.158 0.00 0.00 0.00 4.95
4819 7371 3.031736 AGACCATAACGCTCTACACCAT 58.968 45.455 0.00 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.