Multiple sequence alignment - TraesCS3B01G385100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G385100 chr3B 100.000 5770 0 0 1 5770 605271969 605266200 0.000000e+00 10656.0
1 TraesCS3B01G385100 chr3B 86.161 224 14 4 5562 5768 60417114 60416891 5.820000e-55 226.0
2 TraesCS3B01G385100 chr3B 85.068 221 17 2 5566 5770 617254807 617255027 1.630000e-50 211.0
3 TraesCS3B01G385100 chr3D 90.657 3179 151 53 4 3093 457559184 457556063 0.000000e+00 4091.0
4 TraesCS3B01G385100 chr3D 92.263 1874 83 32 3538 5381 457555800 457553959 0.000000e+00 2601.0
5 TraesCS3B01G385100 chr3D 90.303 165 16 0 5394 5558 457553886 457553722 3.500000e-52 217.0
6 TraesCS3B01G385100 chr3D 85.268 224 16 3 5564 5770 10652340 10652563 1.260000e-51 215.0
7 TraesCS3B01G385100 chr3A 87.777 3117 195 72 96 3132 600344599 600341589 0.000000e+00 3474.0
8 TraesCS3B01G385100 chr3A 93.396 2029 62 30 3384 5386 600341456 600339474 0.000000e+00 2939.0
9 TraesCS3B01G385100 chr3A 90.146 1025 86 10 4148 5160 343940471 343939450 0.000000e+00 1319.0
10 TraesCS3B01G385100 chr3A 90.132 152 12 2 4002 4153 344048347 344048199 1.640000e-45 195.0
11 TraesCS3B01G385100 chr1B 93.739 1166 61 8 4002 5160 179860603 179861763 0.000000e+00 1738.0
12 TraesCS3B01G385100 chr1B 92.897 718 42 6 4450 5160 159781221 159781936 0.000000e+00 1035.0
13 TraesCS3B01G385100 chr1B 96.029 277 10 1 4002 4278 159780945 159781220 3.170000e-122 449.0
14 TraesCS3B01G385100 chr4D 86.301 219 13 3 5567 5768 435402364 435402582 7.530000e-54 222.0
15 TraesCS3B01G385100 chr7A 90.323 93 7 2 5558 5648 327916978 327917070 2.820000e-23 121.0
16 TraesCS3B01G385100 chr5B 80.180 111 19 3 5662 5770 60800271 60800162 4.790000e-11 80.5
17 TraesCS3B01G385100 chr5A 77.477 111 22 3 5662 5770 45963094 45963203 4.830000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G385100 chr3B 605266200 605271969 5769 True 10656.0 10656 100.000000 1 5770 1 chr3B.!!$R2 5769
1 TraesCS3B01G385100 chr3D 457553722 457559184 5462 True 2303.0 4091 91.074333 4 5558 3 chr3D.!!$R1 5554
2 TraesCS3B01G385100 chr3A 600339474 600344599 5125 True 3206.5 3474 90.586500 96 5386 2 chr3A.!!$R3 5290
3 TraesCS3B01G385100 chr3A 343939450 343940471 1021 True 1319.0 1319 90.146000 4148 5160 1 chr3A.!!$R1 1012
4 TraesCS3B01G385100 chr1B 179860603 179861763 1160 False 1738.0 1738 93.739000 4002 5160 1 chr1B.!!$F1 1158
5 TraesCS3B01G385100 chr1B 159780945 159781936 991 False 742.0 1035 94.463000 4002 5160 2 chr1B.!!$F2 1158

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
523 598 0.616111 AGGACGAGGAGGTGAAGCAT 60.616 55.0 0.00 0.0 0.00 3.79 F
1042 1172 0.320771 GCTTCTTCCTCCTTGTCGCA 60.321 55.0 0.00 0.0 0.00 5.10 F
1436 1574 0.373716 CGTAGCTGATTTCGTTGCCC 59.626 55.0 0.00 0.0 0.00 5.36 F
1732 1889 0.951040 GGTGCAGAAAGGAGACACCG 60.951 60.0 0.00 0.0 41.21 4.94 F
1948 2108 0.960364 GGCAGACAAGCCGAAATCCA 60.960 55.0 0.00 0.0 46.12 3.41 F
3156 3322 0.250901 ACAGCAAACTAGCCCCTGTG 60.251 55.0 5.47 0.0 35.60 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1567 1705 0.109532 TGGATCGGGCACAAGAACAA 59.890 50.0 0.00 0.0 0.00 2.83 R
2459 2619 0.608130 AGGCTGACATCTTACGTGCA 59.392 50.0 0.00 0.0 0.00 4.57 R
3137 3303 0.250901 CACAGGGGCTAGTTTGCTGT 60.251 55.0 0.00 0.0 0.00 4.40 R
3140 3306 0.539669 AACCACAGGGGCTAGTTTGC 60.540 55.0 0.00 0.0 42.05 3.68 R
3173 3339 0.601558 TGCCTCGTGGTTGTCTCTAC 59.398 55.0 5.26 0.0 35.27 2.59 R
4950 5145 0.773644 ACCAACTCAGGATGCCAAGT 59.226 50.0 0.00 0.0 34.76 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 54 7.255569 AGTTACTACAAAAGCTGGTGAAAAAC 58.744 34.615 3.99 3.60 0.00 2.43
51 55 5.652994 ACTACAAAAGCTGGTGAAAAACA 57.347 34.783 3.99 0.00 0.00 2.83
52 56 5.650543 ACTACAAAAGCTGGTGAAAAACAG 58.349 37.500 3.99 0.00 37.76 3.16
116 129 3.550992 CGCCTCATTAACGCGCGT 61.551 61.111 32.73 32.73 39.39 6.01
117 130 2.782615 GCCTCATTAACGCGCGTT 59.217 55.556 44.23 44.23 41.65 4.84
139 158 3.119884 TGTTAACCGAAAGCGAGACGATA 60.120 43.478 2.48 0.00 40.82 2.92
140 159 2.642139 AACCGAAAGCGAGACGATAA 57.358 45.000 0.00 0.00 40.82 1.75
235 254 2.901051 GATACAGGTGTCACGGGGCG 62.901 65.000 0.00 0.00 0.00 6.13
462 534 4.736896 GACGCCGTGACCCTGACC 62.737 72.222 0.00 0.00 0.00 4.02
516 588 0.923358 AGAGATCAGGACGAGGAGGT 59.077 55.000 0.00 0.00 0.00 3.85
518 590 0.626382 AGATCAGGACGAGGAGGTGA 59.374 55.000 0.00 0.00 0.00 4.02
522 597 1.228894 AGGACGAGGAGGTGAAGCA 60.229 57.895 0.00 0.00 0.00 3.91
523 598 0.616111 AGGACGAGGAGGTGAAGCAT 60.616 55.000 0.00 0.00 0.00 3.79
592 689 4.087892 CCGTGGTCCCTCTGCTGG 62.088 72.222 0.00 0.00 0.00 4.85
678 777 2.399356 GCGCCTTTCCTTTCCTCCG 61.399 63.158 0.00 0.00 0.00 4.63
679 778 1.295423 CGCCTTTCCTTTCCTCCGA 59.705 57.895 0.00 0.00 0.00 4.55
681 780 1.166129 GCCTTTCCTTTCCTCCGAAC 58.834 55.000 0.00 0.00 0.00 3.95
759 865 0.690762 GCTACTTCACCACCCCTTGA 59.309 55.000 0.00 0.00 0.00 3.02
770 876 1.299976 CCCCTTGACCCTTCTTCCG 59.700 63.158 0.00 0.00 0.00 4.30
845 968 2.511600 CCGGTTGATCTGACCCGC 60.512 66.667 11.64 0.00 39.12 6.13
848 971 2.577059 GTTGATCTGACCCGCCGA 59.423 61.111 0.00 0.00 0.00 5.54
960 1087 0.686112 CCTCTTTCTCTCCCTCGCCT 60.686 60.000 0.00 0.00 0.00 5.52
1031 1161 0.600057 CCTGCTTGGTTGCTTCTTCC 59.400 55.000 0.00 0.00 0.00 3.46
1042 1172 0.320771 GCTTCTTCCTCCTTGTCGCA 60.321 55.000 0.00 0.00 0.00 5.10
1045 1175 1.048601 TCTTCCTCCTTGTCGCACTT 58.951 50.000 0.00 0.00 0.00 3.16
1072 1202 3.391296 TCTCTGGTTAAGTTTGAGGTGCT 59.609 43.478 0.00 0.00 0.00 4.40
1077 1207 1.896220 TAAGTTTGAGGTGCTGCAGG 58.104 50.000 17.12 0.00 0.00 4.85
1158 1290 0.984230 GTTGGTGTCTGATCCCTCCA 59.016 55.000 0.00 0.00 0.00 3.86
1170 1302 7.039784 TGTCTGATCCCTCCAGTTTTTATTTTG 60.040 37.037 0.00 0.00 33.57 2.44
1220 1352 1.308069 ACGCGCGGAAGTAAGTAGGA 61.308 55.000 35.22 0.00 0.00 2.94
1230 1362 5.106078 CGGAAGTAAGTAGGATATCTCTGCC 60.106 48.000 2.05 0.00 0.00 4.85
1252 1384 1.131883 CCAAGAGATGCCTTTCTTGCG 59.868 52.381 14.41 6.57 45.60 4.85
1287 1419 7.750229 ATTTATGATGCACGATTATGTCCTT 57.250 32.000 0.00 0.00 0.00 3.36
1327 1459 1.635663 CTCCGCCCGCTGTTTACTTG 61.636 60.000 0.00 0.00 0.00 3.16
1338 1473 6.304126 CCGCTGTTTACTTGTAGTATGTTTG 58.696 40.000 0.00 0.00 29.64 2.93
1368 1503 4.728534 TGATTCGGTTAAAGATTTTGGCG 58.271 39.130 0.00 0.00 0.00 5.69
1387 1525 2.418746 GCGAGCTTAGAATTGTGGAGGA 60.419 50.000 0.00 0.00 0.00 3.71
1388 1526 3.742640 GCGAGCTTAGAATTGTGGAGGAT 60.743 47.826 0.00 0.00 0.00 3.24
1436 1574 0.373716 CGTAGCTGATTTCGTTGCCC 59.626 55.000 0.00 0.00 0.00 5.36
1442 1580 3.509575 AGCTGATTTCGTTGCCCATTTTA 59.490 39.130 0.00 0.00 0.00 1.52
1598 1752 2.932622 GCCCGATCCACATATGCTGTAG 60.933 54.545 1.58 0.00 35.91 2.74
1600 1754 3.367806 CCCGATCCACATATGCTGTAGAG 60.368 52.174 1.58 0.00 35.91 2.43
1698 1855 7.041780 TGTTCTGAAGCTTTGATCTGTACTTTC 60.042 37.037 0.00 0.00 0.00 2.62
1725 1882 3.136443 TGAAGAAGAAGGTGCAGAAAGGA 59.864 43.478 0.00 0.00 0.00 3.36
1732 1889 0.951040 GGTGCAGAAAGGAGACACCG 60.951 60.000 0.00 0.00 41.21 4.94
1905 2065 5.332506 GCTTGTCATTTCAACCATTTTGACG 60.333 40.000 0.00 0.00 37.01 4.35
1906 2066 4.047822 TGTCATTTCAACCATTTTGACGC 58.952 39.130 0.00 0.00 37.01 5.19
1948 2108 0.960364 GGCAGACAAGCCGAAATCCA 60.960 55.000 0.00 0.00 46.12 3.41
2035 2195 2.786495 CCAGTAGCTCCATCGCCGT 61.786 63.158 0.00 0.00 0.00 5.68
2106 2266 5.649831 GGAGATAAAAGATGTCAAGCCAGTT 59.350 40.000 0.00 0.00 0.00 3.16
2142 2302 2.558359 ACAAAACAAGCATGCCTACTCC 59.442 45.455 15.66 0.00 0.00 3.85
2163 2323 3.360340 GCGCTTGCCTCTGCTGTT 61.360 61.111 0.00 0.00 38.71 3.16
2327 2487 7.873505 GGGTTATCTGGTAATGAATCTACACTC 59.126 40.741 0.00 0.00 0.00 3.51
2450 2610 6.801539 CTGTCTTCAGTTTTTACTGGCATA 57.198 37.500 5.55 0.00 38.23 3.14
2451 2611 6.554334 TGTCTTCAGTTTTTACTGGCATAC 57.446 37.500 5.55 1.38 38.23 2.39
2452 2612 5.178623 TGTCTTCAGTTTTTACTGGCATACG 59.821 40.000 5.55 0.00 38.23 3.06
2453 2613 5.407387 GTCTTCAGTTTTTACTGGCATACGA 59.593 40.000 5.55 0.00 38.23 3.43
2454 2614 5.637810 TCTTCAGTTTTTACTGGCATACGAG 59.362 40.000 5.55 0.00 38.23 4.18
2455 2615 5.142061 TCAGTTTTTACTGGCATACGAGA 57.858 39.130 5.55 0.00 38.23 4.04
2456 2616 5.543714 TCAGTTTTTACTGGCATACGAGAA 58.456 37.500 5.55 0.00 38.23 2.87
2457 2617 5.407387 TCAGTTTTTACTGGCATACGAGAAC 59.593 40.000 5.55 0.00 38.23 3.01
2458 2618 5.178623 CAGTTTTTACTGGCATACGAGAACA 59.821 40.000 0.00 0.00 34.28 3.18
2459 2619 5.938125 AGTTTTTACTGGCATACGAGAACAT 59.062 36.000 0.00 0.00 0.00 2.71
2460 2620 5.794687 TTTTACTGGCATACGAGAACATG 57.205 39.130 0.00 0.00 0.00 3.21
2461 2621 1.656652 ACTGGCATACGAGAACATGC 58.343 50.000 0.00 0.00 45.47 4.06
2493 2653 8.609483 AGATGTCAGCCTGGTATGAATTAATAT 58.391 33.333 5.48 0.00 0.00 1.28
2538 2702 6.935208 GGTTGGTAGAGAGTTGTTGTCTAATT 59.065 38.462 0.00 0.00 33.85 1.40
2566 2730 6.319405 TCATTATCATGTCAGTTGGTCCAATG 59.681 38.462 7.77 7.53 0.00 2.82
2620 2784 9.859427 TGGTCATTTTCAATCATACTTTCATTC 57.141 29.630 0.00 0.00 0.00 2.67
2643 2807 6.761117 TCGATGATTTTGATGTTCTTACACG 58.239 36.000 0.00 0.00 37.03 4.49
2644 2808 5.449113 CGATGATTTTGATGTTCTTACACGC 59.551 40.000 0.00 0.00 37.03 5.34
2646 2810 6.252967 TGATTTTGATGTTCTTACACGCAT 57.747 33.333 0.00 0.00 37.03 4.73
2649 2813 7.962373 TGATTTTGATGTTCTTACACGCATAAG 59.038 33.333 0.80 0.80 37.03 1.73
2650 2814 7.428282 TTTTGATGTTCTTACACGCATAAGA 57.572 32.000 5.16 5.16 39.01 2.10
2651 2815 7.428282 TTTGATGTTCTTACACGCATAAGAA 57.572 32.000 14.56 14.56 44.93 2.52
2657 2821 6.647212 TTCTTACACGCATAAGAATGTGAG 57.353 37.500 14.56 1.90 43.20 3.51
2714 2880 6.147821 CAGAATAGCGAACCATTATTAGGGTG 59.852 42.308 0.00 0.00 37.49 4.61
2749 2915 5.308237 ACTGTACTTCTTGGGATGAAGAGTT 59.692 40.000 10.00 0.00 42.37 3.01
2750 2916 6.183361 ACTGTACTTCTTGGGATGAAGAGTTT 60.183 38.462 10.00 0.00 42.37 2.66
2751 2917 6.601332 TGTACTTCTTGGGATGAAGAGTTTT 58.399 36.000 10.00 0.00 42.37 2.43
2752 2918 6.486657 TGTACTTCTTGGGATGAAGAGTTTTG 59.513 38.462 10.00 0.00 42.37 2.44
2753 2919 5.694995 ACTTCTTGGGATGAAGAGTTTTGA 58.305 37.500 10.00 0.00 42.37 2.69
2754 2920 5.532779 ACTTCTTGGGATGAAGAGTTTTGAC 59.467 40.000 10.00 0.00 42.37 3.18
2892 3058 2.300437 GCACTGAGAGGACTTGTTAGGT 59.700 50.000 0.00 0.00 0.00 3.08
3062 3228 1.981256 TGAAGCACCAAAGGGAACTC 58.019 50.000 0.00 0.00 42.68 3.01
3093 3259 2.119671 GGTGAGCACCGTTTTTGAAG 57.880 50.000 3.57 0.00 42.29 3.02
3098 3264 4.508861 GTGAGCACCGTTTTTGAAGTAGTA 59.491 41.667 0.00 0.00 0.00 1.82
3106 3272 5.907391 CCGTTTTTGAAGTAGTACTTGCAAG 59.093 40.000 24.84 24.84 38.80 4.01
3107 3273 5.395486 CGTTTTTGAAGTAGTACTTGCAAGC 59.605 40.000 26.27 11.09 38.80 4.01
3111 3277 3.323691 TGAAGTAGTACTTGCAAGCCTCA 59.676 43.478 26.27 11.63 38.80 3.86
3114 3280 3.772025 AGTAGTACTTGCAAGCCTCATCT 59.228 43.478 26.27 16.17 0.00 2.90
3116 3282 4.026356 AGTACTTGCAAGCCTCATCTTT 57.974 40.909 26.27 6.02 0.00 2.52
3141 3307 5.616488 TTTCCCGAACATAAAACTACAGC 57.384 39.130 0.00 0.00 0.00 4.40
3142 3308 4.274602 TCCCGAACATAAAACTACAGCA 57.725 40.909 0.00 0.00 0.00 4.41
3143 3309 4.643463 TCCCGAACATAAAACTACAGCAA 58.357 39.130 0.00 0.00 0.00 3.91
3144 3310 5.064558 TCCCGAACATAAAACTACAGCAAA 58.935 37.500 0.00 0.00 0.00 3.68
3145 3311 5.049267 TCCCGAACATAAAACTACAGCAAAC 60.049 40.000 0.00 0.00 0.00 2.93
3146 3312 5.048991 CCCGAACATAAAACTACAGCAAACT 60.049 40.000 0.00 0.00 0.00 2.66
3147 3313 6.148150 CCCGAACATAAAACTACAGCAAACTA 59.852 38.462 0.00 0.00 0.00 2.24
3148 3314 7.234384 CCGAACATAAAACTACAGCAAACTAG 58.766 38.462 0.00 0.00 0.00 2.57
3149 3315 6.736853 CGAACATAAAACTACAGCAAACTAGC 59.263 38.462 0.00 0.00 0.00 3.42
3150 3316 6.496338 ACATAAAACTACAGCAAACTAGCC 57.504 37.500 0.00 0.00 34.23 3.93
3151 3317 5.414765 ACATAAAACTACAGCAAACTAGCCC 59.585 40.000 0.00 0.00 34.23 5.19
3152 3318 2.491675 AACTACAGCAAACTAGCCCC 57.508 50.000 0.00 0.00 34.23 5.80
3153 3319 1.657804 ACTACAGCAAACTAGCCCCT 58.342 50.000 0.00 0.00 34.23 4.79
3154 3320 1.279271 ACTACAGCAAACTAGCCCCTG 59.721 52.381 0.00 0.00 34.23 4.45
3155 3321 1.279271 CTACAGCAAACTAGCCCCTGT 59.721 52.381 9.79 9.79 39.76 4.00
3156 3322 0.250901 ACAGCAAACTAGCCCCTGTG 60.251 55.000 5.47 0.00 35.60 3.66
3157 3323 0.962356 CAGCAAACTAGCCCCTGTGG 60.962 60.000 0.00 0.00 34.23 4.17
3158 3324 1.074951 GCAAACTAGCCCCTGTGGT 59.925 57.895 0.00 0.00 36.04 4.16
3159 3325 0.539669 GCAAACTAGCCCCTGTGGTT 60.540 55.000 0.00 0.00 36.04 3.67
3160 3326 1.995376 CAAACTAGCCCCTGTGGTTT 58.005 50.000 0.00 0.00 36.04 3.27
3163 3329 2.287977 ACTAGCCCCTGTGGTTTTTC 57.712 50.000 0.00 0.00 36.04 2.29
3165 3331 2.177016 ACTAGCCCCTGTGGTTTTTCTT 59.823 45.455 0.00 0.00 36.04 2.52
3169 3335 4.231273 AGCCCCTGTGGTTTTTCTTAAAT 58.769 39.130 0.00 0.00 36.04 1.40
3173 3339 6.649141 GCCCCTGTGGTTTTTCTTAAATTAAG 59.351 38.462 6.42 6.42 36.04 1.85
3174 3340 7.688328 GCCCCTGTGGTTTTTCTTAAATTAAGT 60.688 37.037 11.97 0.00 35.29 2.24
3190 3356 4.778534 TTAAGTAGAGACAACCACGAGG 57.221 45.455 0.00 0.00 42.21 4.63
3233 3399 2.044053 AACGTGGGCCATGGGATG 60.044 61.111 28.48 4.53 0.00 3.51
3270 3436 0.391793 GCACCTCTAGCCAACTGGTC 60.392 60.000 0.00 0.00 37.57 4.02
3275 3441 0.607217 TCTAGCCAACTGGTCGACGA 60.607 55.000 9.92 4.47 37.57 4.20
3276 3442 0.456221 CTAGCCAACTGGTCGACGAT 59.544 55.000 9.92 0.00 37.57 3.73
3284 3450 2.347697 CTGGTCGACGATCAGTTTCA 57.652 50.000 26.51 0.00 36.18 2.69
3285 3451 2.254459 CTGGTCGACGATCAGTTTCAG 58.746 52.381 26.51 4.29 36.18 3.02
3286 3452 1.611977 TGGTCGACGATCAGTTTCAGT 59.388 47.619 6.73 0.00 0.00 3.41
3287 3453 2.035449 TGGTCGACGATCAGTTTCAGTT 59.965 45.455 6.73 0.00 0.00 3.16
3288 3454 2.662156 GGTCGACGATCAGTTTCAGTTC 59.338 50.000 9.92 0.00 0.00 3.01
3289 3455 3.566523 GTCGACGATCAGTTTCAGTTCT 58.433 45.455 0.00 0.00 0.00 3.01
3290 3456 3.982058 GTCGACGATCAGTTTCAGTTCTT 59.018 43.478 0.00 0.00 0.00 2.52
3291 3457 4.088781 GTCGACGATCAGTTTCAGTTCTTC 59.911 45.833 0.00 0.00 0.00 2.87
3292 3458 3.981416 CGACGATCAGTTTCAGTTCTTCA 59.019 43.478 0.00 0.00 0.00 3.02
3293 3459 4.623167 CGACGATCAGTTTCAGTTCTTCAT 59.377 41.667 0.00 0.00 0.00 2.57
3294 3460 5.800438 CGACGATCAGTTTCAGTTCTTCATA 59.200 40.000 0.00 0.00 0.00 2.15
3295 3461 6.308041 CGACGATCAGTTTCAGTTCTTCATAA 59.692 38.462 0.00 0.00 0.00 1.90
3296 3462 7.009631 CGACGATCAGTTTCAGTTCTTCATAAT 59.990 37.037 0.00 0.00 0.00 1.28
3297 3463 8.553459 ACGATCAGTTTCAGTTCTTCATAATT 57.447 30.769 0.00 0.00 0.00 1.40
3298 3464 9.003658 ACGATCAGTTTCAGTTCTTCATAATTT 57.996 29.630 0.00 0.00 0.00 1.82
3299 3465 9.483062 CGATCAGTTTCAGTTCTTCATAATTTC 57.517 33.333 0.00 0.00 0.00 2.17
3332 3498 9.878599 AGAGTATTTCTTTGTTGTTTGTATTCG 57.121 29.630 0.00 0.00 29.61 3.34
3333 3499 9.872757 GAGTATTTCTTTGTTGTTTGTATTCGA 57.127 29.630 0.00 0.00 0.00 3.71
3337 3503 9.840427 ATTTCTTTGTTGTTTGTATTCGATAGG 57.160 29.630 0.00 0.00 0.00 2.57
3338 3504 6.837992 TCTTTGTTGTTTGTATTCGATAGGC 58.162 36.000 0.00 0.00 0.00 3.93
3339 3505 6.428465 TCTTTGTTGTTTGTATTCGATAGGCA 59.572 34.615 0.00 0.00 0.00 4.75
3340 3506 6.751514 TTGTTGTTTGTATTCGATAGGCAT 57.248 33.333 0.00 0.00 0.00 4.40
3341 3507 6.358118 TGTTGTTTGTATTCGATAGGCATC 57.642 37.500 0.00 0.00 0.00 3.91
3342 3508 6.112734 TGTTGTTTGTATTCGATAGGCATCT 58.887 36.000 0.00 0.00 0.00 2.90
3343 3509 6.597672 TGTTGTTTGTATTCGATAGGCATCTT 59.402 34.615 0.00 0.00 0.00 2.40
3344 3510 7.766738 TGTTGTTTGTATTCGATAGGCATCTTA 59.233 33.333 0.00 0.00 0.00 2.10
3345 3511 7.946655 TGTTTGTATTCGATAGGCATCTTAG 57.053 36.000 0.00 0.00 0.00 2.18
3346 3512 7.722363 TGTTTGTATTCGATAGGCATCTTAGA 58.278 34.615 0.00 0.00 0.00 2.10
3347 3513 8.367911 TGTTTGTATTCGATAGGCATCTTAGAT 58.632 33.333 0.00 0.00 0.00 1.98
3348 3514 8.651588 GTTTGTATTCGATAGGCATCTTAGATG 58.348 37.037 17.16 17.16 0.00 2.90
3349 3515 6.867550 TGTATTCGATAGGCATCTTAGATGG 58.132 40.000 21.90 6.04 0.00 3.51
3350 3516 3.876274 TCGATAGGCATCTTAGATGGC 57.124 47.619 32.71 32.71 43.88 4.40
3356 3522 3.386768 GGCATCTTAGATGGCTAACGA 57.613 47.619 32.53 0.00 40.85 3.85
3357 3523 3.728845 GGCATCTTAGATGGCTAACGAA 58.271 45.455 32.53 0.00 40.85 3.85
3358 3524 4.319177 GGCATCTTAGATGGCTAACGAAT 58.681 43.478 32.53 0.00 40.85 3.34
3359 3525 4.390297 GGCATCTTAGATGGCTAACGAATC 59.610 45.833 32.53 10.16 40.85 2.52
3360 3526 5.233988 GCATCTTAGATGGCTAACGAATCT 58.766 41.667 21.90 0.00 33.24 2.40
3361 3527 6.390721 GCATCTTAGATGGCTAACGAATCTA 58.609 40.000 21.90 0.00 33.24 1.98
3362 3528 7.038659 GCATCTTAGATGGCTAACGAATCTAT 58.961 38.462 21.90 0.00 33.93 1.98
3363 3529 7.547370 GCATCTTAGATGGCTAACGAATCTATT 59.453 37.037 21.90 0.00 33.93 1.73
3364 3530 9.429359 CATCTTAGATGGCTAACGAATCTATTT 57.571 33.333 14.01 0.00 33.93 1.40
3368 3534 9.706691 TTAGATGGCTAACGAATCTATTTTAGG 57.293 33.333 0.00 0.00 33.93 2.69
3369 3535 6.651225 AGATGGCTAACGAATCTATTTTAGGC 59.349 38.462 11.15 11.15 43.76 3.93
3371 3537 6.296026 TGGCTAACGAATCTATTTTAGGCAT 58.704 36.000 14.55 0.00 46.37 4.40
3372 3538 6.770785 TGGCTAACGAATCTATTTTAGGCATT 59.229 34.615 14.55 0.00 46.37 3.56
3373 3539 7.934665 TGGCTAACGAATCTATTTTAGGCATTA 59.065 33.333 14.55 0.41 46.37 1.90
3374 3540 8.228464 GGCTAACGAATCTATTTTAGGCATTAC 58.772 37.037 12.38 0.00 43.26 1.89
3375 3541 8.228464 GCTAACGAATCTATTTTAGGCATTACC 58.772 37.037 0.00 0.00 39.61 2.85
3444 3620 5.440610 ACCACTCACATTGAAGAAAGAGTT 58.559 37.500 0.00 0.00 34.39 3.01
3445 3621 5.297776 ACCACTCACATTGAAGAAAGAGTTG 59.702 40.000 0.00 0.00 34.39 3.16
3446 3622 5.210715 CACTCACATTGAAGAAAGAGTTGC 58.789 41.667 0.00 0.00 34.39 4.17
3447 3623 5.008415 CACTCACATTGAAGAAAGAGTTGCT 59.992 40.000 0.00 0.00 34.39 3.91
3448 3624 5.238214 ACTCACATTGAAGAAAGAGTTGCTC 59.762 40.000 0.00 0.00 32.88 4.26
3455 3635 5.240891 TGAAGAAAGAGTTGCTCTACATGG 58.759 41.667 0.00 0.00 40.28 3.66
3457 3637 5.234466 AGAAAGAGTTGCTCTACATGGTT 57.766 39.130 0.00 0.00 40.28 3.67
3460 3640 3.589988 AGAGTTGCTCTACATGGTTTCG 58.410 45.455 0.00 0.00 39.28 3.46
3462 3642 4.081420 AGAGTTGCTCTACATGGTTTCGAT 60.081 41.667 0.00 0.00 39.28 3.59
3471 3651 7.095607 GCTCTACATGGTTTCGATTAATACCAG 60.096 40.741 12.25 7.90 43.37 4.00
3652 3832 3.917380 CACTAAGACGAGAAAGAGCACTG 59.083 47.826 0.00 0.00 0.00 3.66
3682 3862 1.830279 TTTCTCATCAGGCAAGCTGG 58.170 50.000 0.00 0.00 0.00 4.85
3691 3871 2.044452 GGCAAGCTGGCTTCTTTGT 58.956 52.632 14.08 0.00 40.14 2.83
3692 3872 0.319297 GGCAAGCTGGCTTCTTTGTG 60.319 55.000 14.08 0.00 40.14 3.33
3693 3873 0.386838 GCAAGCTGGCTTCTTTGTGT 59.613 50.000 5.60 0.00 33.42 3.72
3694 3874 1.866880 GCAAGCTGGCTTCTTTGTGTG 60.867 52.381 5.60 0.00 33.42 3.82
3715 3895 4.222145 GTGTTCCCCTGATGTCTTGTACTA 59.778 45.833 0.00 0.00 0.00 1.82
3716 3896 4.222145 TGTTCCCCTGATGTCTTGTACTAC 59.778 45.833 0.00 0.00 0.00 2.73
3717 3897 4.332683 TCCCCTGATGTCTTGTACTACT 57.667 45.455 0.00 0.00 0.00 2.57
3729 3909 6.040878 GTCTTGTACTACTTCTGTTGTGTGT 58.959 40.000 0.00 0.00 34.32 3.72
3748 3928 5.993441 GTGTGTTCCTTGCTTTTACCTACTA 59.007 40.000 0.00 0.00 0.00 1.82
3964 4145 3.500680 TGTCAAACAAGGATAAAGACGGC 59.499 43.478 0.00 0.00 0.00 5.68
3965 4146 3.751698 GTCAAACAAGGATAAAGACGGCT 59.248 43.478 0.00 0.00 0.00 5.52
4169 4350 1.903183 GGCTATACAGGGAGGATGACC 59.097 57.143 0.00 0.00 0.00 4.02
4348 4535 2.004583 TCGCCGATAAGTTTGAGGTG 57.995 50.000 0.00 0.00 0.00 4.00
4525 4712 3.087031 CCATGTTGCCTGATATGATCCC 58.913 50.000 0.00 0.00 0.00 3.85
4528 4715 4.025040 TGTTGCCTGATATGATCCCATC 57.975 45.455 0.00 0.00 34.31 3.51
4541 4728 3.499737 CCATCAACGTCAGGCGCC 61.500 66.667 21.89 21.89 46.11 6.53
4867 5059 3.119849 ACCATGCTTGAAATGTAAGACGC 60.120 43.478 0.22 0.00 0.00 5.19
4869 5061 2.139917 TGCTTGAAATGTAAGACGCGT 58.860 42.857 13.85 13.85 0.00 6.01
4950 5145 2.506644 TCACTGATTGAGGATGATGCCA 59.493 45.455 0.00 0.00 0.00 4.92
4996 5191 3.861840 TGGTACATAGAGCAGTTTCAGC 58.138 45.455 0.00 0.00 0.00 4.26
5122 5340 2.091885 TGGCAGAAAAGAAAGGACCTGT 60.092 45.455 0.00 0.00 0.00 4.00
5140 5359 6.351881 GGACCTGTATTCAGTTACCAATCAGA 60.352 42.308 0.00 0.00 39.82 3.27
5167 5386 5.007626 GCAACAGGATTATGAAGCGTGATTA 59.992 40.000 4.38 0.00 36.30 1.75
5175 5394 7.095607 GGATTATGAAGCGTGATTACTAACCAG 60.096 40.741 0.00 0.00 0.00 4.00
5178 5399 5.109210 TGAAGCGTGATTACTAACCAGATG 58.891 41.667 0.00 0.00 0.00 2.90
5209 5432 1.342474 TGTGGTGGGCTGAAAAGGAAA 60.342 47.619 0.00 0.00 0.00 3.13
5218 5441 5.838521 TGGGCTGAAAAGGAAAGTTTATCTT 59.161 36.000 0.00 0.00 38.10 2.40
5219 5442 6.015434 TGGGCTGAAAAGGAAAGTTTATCTTC 60.015 38.462 4.72 0.31 35.02 2.87
5220 5443 6.209589 GGGCTGAAAAGGAAAGTTTATCTTCT 59.790 38.462 4.72 0.00 35.02 2.85
5320 5550 6.599356 TGACTTGTACTCCAGCACTTTATA 57.401 37.500 0.00 0.00 0.00 0.98
5387 5617 7.455638 AGGTACCACTACCAACTTCAATAAGTA 59.544 37.037 15.94 0.00 43.26 2.24
5388 5618 7.547019 GGTACCACTACCAACTTCAATAAGTAC 59.453 40.741 7.15 0.00 41.91 2.73
5389 5619 7.312415 ACCACTACCAACTTCAATAAGTACT 57.688 36.000 0.00 0.00 45.37 2.73
5390 5620 7.384477 ACCACTACCAACTTCAATAAGTACTC 58.616 38.462 0.00 0.00 45.37 2.59
5391 5621 7.234988 ACCACTACCAACTTCAATAAGTACTCT 59.765 37.037 0.00 0.00 45.37 3.24
5392 5622 8.746530 CCACTACCAACTTCAATAAGTACTCTA 58.253 37.037 0.00 0.00 45.37 2.43
5404 5694 9.511272 TCAATAAGTACTCTAGCGGTATGATTA 57.489 33.333 0.00 0.00 0.00 1.75
5438 5728 3.312828 GCTCTGTAGATCTACCAATGCG 58.687 50.000 26.37 12.18 35.26 4.73
5440 5730 4.737946 GCTCTGTAGATCTACCAATGCGTT 60.738 45.833 26.37 0.00 35.26 4.84
5443 5733 5.810587 TCTGTAGATCTACCAATGCGTTTTC 59.189 40.000 26.37 1.39 35.26 2.29
5465 5755 6.279513 TCCATTTTTAAATCGCCTCACATT 57.720 33.333 0.00 0.00 0.00 2.71
5470 5760 6.567687 TTTTAAATCGCCTCACATTCTTCA 57.432 33.333 0.00 0.00 0.00 3.02
5480 5770 4.023707 CCTCACATTCTTCAGTTGTGGTTC 60.024 45.833 10.64 0.00 40.82 3.62
5482 5772 5.924356 TCACATTCTTCAGTTGTGGTTCTA 58.076 37.500 10.64 0.00 40.82 2.10
5488 5778 6.474140 TCTTCAGTTGTGGTTCTACAGTTA 57.526 37.500 0.00 0.00 0.00 2.24
5490 5780 5.209818 TCAGTTGTGGTTCTACAGTTAGG 57.790 43.478 0.00 0.00 0.00 2.69
5491 5781 3.746492 CAGTTGTGGTTCTACAGTTAGGC 59.254 47.826 0.00 0.00 0.00 3.93
5501 5791 7.125811 TGGTTCTACAGTTAGGCTTTGATATCT 59.874 37.037 3.98 0.00 0.00 1.98
5510 5800 4.712476 AGGCTTTGATATCTTAGGCTGTG 58.288 43.478 23.29 0.00 41.34 3.66
5519 5809 1.160137 CTTAGGCTGTGCTGTGAACC 58.840 55.000 0.00 0.00 0.00 3.62
5558 5848 3.527507 TCTAGGCCGATATCTTCAGGT 57.472 47.619 0.00 0.00 0.00 4.00
5559 5849 3.845860 TCTAGGCCGATATCTTCAGGTT 58.154 45.455 0.00 0.00 0.00 3.50
5560 5850 4.223953 TCTAGGCCGATATCTTCAGGTTT 58.776 43.478 0.00 0.00 0.00 3.27
5561 5851 3.933861 AGGCCGATATCTTCAGGTTTT 57.066 42.857 0.00 0.00 0.00 2.43
5562 5852 4.236527 AGGCCGATATCTTCAGGTTTTT 57.763 40.909 0.00 0.00 0.00 1.94
5593 5883 9.953697 TTTTTGCGAAATAACACTTGTATTACT 57.046 25.926 0.00 0.00 0.00 2.24
5594 5884 9.601971 TTTTGCGAAATAACACTTGTATTACTC 57.398 29.630 0.00 0.00 0.00 2.59
5595 5885 7.892778 TGCGAAATAACACTTGTATTACTCA 57.107 32.000 0.00 0.00 0.00 3.41
5596 5886 8.312896 TGCGAAATAACACTTGTATTACTCAA 57.687 30.769 0.00 0.00 0.00 3.02
5597 5887 8.440059 TGCGAAATAACACTTGTATTACTCAAG 58.560 33.333 4.45 4.45 45.15 3.02
5598 5888 8.653338 GCGAAATAACACTTGTATTACTCAAGA 58.347 33.333 11.72 0.00 43.17 3.02
5625 5915 9.530633 AGTTTAAGGATTACAATATCGTCTGAC 57.469 33.333 0.00 0.00 0.00 3.51
5626 5916 9.309516 GTTTAAGGATTACAATATCGTCTGACA 57.690 33.333 8.73 0.00 0.00 3.58
5627 5917 9.878667 TTTAAGGATTACAATATCGTCTGACAA 57.121 29.630 8.73 0.00 0.00 3.18
5635 5925 7.953158 ACAATATCGTCTGACAATATTCAGG 57.047 36.000 10.29 4.14 42.95 3.86
5636 5926 6.931281 ACAATATCGTCTGACAATATTCAGGG 59.069 38.462 10.29 3.85 42.95 4.45
5637 5927 3.179443 TCGTCTGACAATATTCAGGGC 57.821 47.619 8.73 0.00 42.95 5.19
5638 5928 2.766263 TCGTCTGACAATATTCAGGGCT 59.234 45.455 8.73 0.00 42.95 5.19
5639 5929 3.197766 TCGTCTGACAATATTCAGGGCTT 59.802 43.478 8.73 0.00 42.95 4.35
5640 5930 3.557595 CGTCTGACAATATTCAGGGCTTC 59.442 47.826 8.73 0.00 42.95 3.86
5641 5931 3.879892 GTCTGACAATATTCAGGGCTTCC 59.120 47.826 2.24 0.00 42.95 3.46
5642 5932 3.782523 TCTGACAATATTCAGGGCTTCCT 59.217 43.478 4.88 0.00 42.95 3.36
5643 5933 4.133078 CTGACAATATTCAGGGCTTCCTC 58.867 47.826 0.00 0.00 39.29 3.71
5644 5934 3.782523 TGACAATATTCAGGGCTTCCTCT 59.217 43.478 0.00 0.00 39.29 3.69
5645 5935 4.133078 GACAATATTCAGGGCTTCCTCTG 58.867 47.826 0.00 0.00 39.29 3.35
5646 5936 3.117738 ACAATATTCAGGGCTTCCTCTGG 60.118 47.826 0.00 0.00 39.29 3.86
5647 5937 2.568546 TATTCAGGGCTTCCTCTGGA 57.431 50.000 0.00 0.00 39.29 3.86
5648 5938 1.904440 ATTCAGGGCTTCCTCTGGAT 58.096 50.000 0.00 0.00 39.29 3.41
5649 5939 1.673767 TTCAGGGCTTCCTCTGGATT 58.326 50.000 0.00 0.00 39.29 3.01
5650 5940 0.914644 TCAGGGCTTCCTCTGGATTG 59.085 55.000 0.00 0.00 39.29 2.67
5651 5941 0.750911 CAGGGCTTCCTCTGGATTGC 60.751 60.000 0.00 0.00 39.29 3.56
5652 5942 1.210204 AGGGCTTCCTCTGGATTGCA 61.210 55.000 11.85 0.00 35.60 4.08
5653 5943 0.750911 GGGCTTCCTCTGGATTGCAG 60.751 60.000 0.00 0.00 34.74 4.41
5654 5944 0.034670 GGCTTCCTCTGGATTGCAGT 60.035 55.000 5.02 0.00 34.74 4.40
5655 5945 1.377536 GCTTCCTCTGGATTGCAGTC 58.622 55.000 5.02 0.00 33.79 3.51
5656 5946 2.016096 GCTTCCTCTGGATTGCAGTCC 61.016 57.143 20.81 20.81 38.81 3.85
5657 5947 0.250234 TTCCTCTGGATTGCAGTCCG 59.750 55.000 21.89 16.41 41.35 4.79
5658 5948 1.153289 CCTCTGGATTGCAGTCCGG 60.153 63.158 27.01 27.01 44.54 5.14
5659 5949 1.817099 CTCTGGATTGCAGTCCGGC 60.817 63.158 27.85 4.75 43.16 6.13
5660 5950 2.825836 CTGGATTGCAGTCCGGCC 60.826 66.667 22.68 0.84 41.35 6.13
5661 5951 3.329889 TGGATTGCAGTCCGGCCT 61.330 61.111 21.89 0.00 41.35 5.19
5662 5952 2.044946 GGATTGCAGTCCGGCCTT 60.045 61.111 13.02 0.00 0.00 4.35
5663 5953 2.409870 GGATTGCAGTCCGGCCTTG 61.410 63.158 13.02 0.00 0.00 3.61
5664 5954 3.056313 GATTGCAGTCCGGCCTTGC 62.056 63.158 15.09 15.09 38.30 4.01
5665 5955 3.866379 ATTGCAGTCCGGCCTTGCA 62.866 57.895 19.11 19.11 45.28 4.08
5666 5956 4.577677 TGCAGTCCGGCCTTGCAA 62.578 61.111 20.24 0.00 44.13 4.08
5667 5957 4.043200 GCAGTCCGGCCTTGCAAC 62.043 66.667 16.50 0.00 37.75 4.17
5668 5958 3.365265 CAGTCCGGCCTTGCAACC 61.365 66.667 0.00 0.00 0.00 3.77
5669 5959 3.570212 AGTCCGGCCTTGCAACCT 61.570 61.111 0.00 0.00 0.00 3.50
5670 5960 2.221299 AGTCCGGCCTTGCAACCTA 61.221 57.895 0.00 0.00 0.00 3.08
5671 5961 1.077716 GTCCGGCCTTGCAACCTAT 60.078 57.895 0.00 0.00 0.00 2.57
5672 5962 1.095807 GTCCGGCCTTGCAACCTATC 61.096 60.000 0.00 0.00 0.00 2.08
5673 5963 1.077787 CCGGCCTTGCAACCTATCA 60.078 57.895 0.00 0.00 0.00 2.15
5674 5964 0.679640 CCGGCCTTGCAACCTATCAA 60.680 55.000 0.00 0.00 0.00 2.57
5675 5965 1.173043 CGGCCTTGCAACCTATCAAA 58.827 50.000 0.00 0.00 0.00 2.69
5676 5966 1.133025 CGGCCTTGCAACCTATCAAAG 59.867 52.381 0.00 0.00 0.00 2.77
5677 5967 2.171003 GGCCTTGCAACCTATCAAAGT 58.829 47.619 0.00 0.00 0.00 2.66
5678 5968 2.562738 GGCCTTGCAACCTATCAAAGTT 59.437 45.455 0.00 0.00 0.00 2.66
5679 5969 3.578688 GCCTTGCAACCTATCAAAGTTG 58.421 45.455 0.00 0.00 44.93 3.16
5680 5970 3.614870 GCCTTGCAACCTATCAAAGTTGG 60.615 47.826 0.00 0.00 42.87 3.77
5681 5971 3.578688 CTTGCAACCTATCAAAGTTGGC 58.421 45.455 0.00 0.00 42.87 4.52
5682 5972 1.892474 TGCAACCTATCAAAGTTGGCC 59.108 47.619 0.00 0.00 42.87 5.36
5683 5973 1.892474 GCAACCTATCAAAGTTGGCCA 59.108 47.619 0.00 0.00 42.87 5.36
5684 5974 2.497273 GCAACCTATCAAAGTTGGCCAT 59.503 45.455 6.09 0.00 42.87 4.40
5685 5975 3.676873 GCAACCTATCAAAGTTGGCCATG 60.677 47.826 6.09 0.75 42.87 3.66
5686 5976 3.737559 ACCTATCAAAGTTGGCCATGA 57.262 42.857 6.09 7.96 0.00 3.07
5687 5977 4.046286 ACCTATCAAAGTTGGCCATGAA 57.954 40.909 6.09 0.00 0.00 2.57
5688 5978 4.415596 ACCTATCAAAGTTGGCCATGAAA 58.584 39.130 6.09 0.00 0.00 2.69
5689 5979 5.025453 ACCTATCAAAGTTGGCCATGAAAT 58.975 37.500 6.09 0.00 0.00 2.17
5690 5980 5.105228 ACCTATCAAAGTTGGCCATGAAATG 60.105 40.000 6.09 2.74 46.21 2.32
5704 5994 5.565592 CATGAAATGGCTAGCACTGTTAA 57.434 39.130 18.24 0.00 41.79 2.01
5705 5995 5.335127 CATGAAATGGCTAGCACTGTTAAC 58.665 41.667 18.24 0.00 41.79 2.01
5706 5996 4.393834 TGAAATGGCTAGCACTGTTAACA 58.606 39.130 18.24 8.28 0.00 2.41
5707 5997 4.215399 TGAAATGGCTAGCACTGTTAACAC 59.785 41.667 18.24 0.00 0.00 3.32
5708 5998 3.703001 ATGGCTAGCACTGTTAACACT 57.297 42.857 18.24 3.29 0.00 3.55
5709 5999 4.819105 ATGGCTAGCACTGTTAACACTA 57.181 40.909 18.24 4.35 0.00 2.74
5710 6000 3.921677 TGGCTAGCACTGTTAACACTAC 58.078 45.455 18.24 0.00 0.00 2.73
5711 6001 2.921754 GGCTAGCACTGTTAACACTACG 59.078 50.000 18.24 0.00 0.00 3.51
5712 6002 3.366679 GGCTAGCACTGTTAACACTACGA 60.367 47.826 18.24 0.00 0.00 3.43
5713 6003 3.607209 GCTAGCACTGTTAACACTACGAC 59.393 47.826 10.63 0.00 0.00 4.34
5714 6004 2.658285 AGCACTGTTAACACTACGACG 58.342 47.619 3.59 0.00 0.00 5.12
5715 6005 2.291465 AGCACTGTTAACACTACGACGA 59.709 45.455 3.59 0.00 0.00 4.20
5716 6006 3.044986 GCACTGTTAACACTACGACGAA 58.955 45.455 3.59 0.00 0.00 3.85
5717 6007 3.671928 GCACTGTTAACACTACGACGAAT 59.328 43.478 3.59 0.00 0.00 3.34
5718 6008 4.432503 GCACTGTTAACACTACGACGAATG 60.433 45.833 3.59 0.00 0.00 2.67
5719 6009 4.678287 CACTGTTAACACTACGACGAATGT 59.322 41.667 3.59 0.00 0.00 2.71
5720 6010 4.678287 ACTGTTAACACTACGACGAATGTG 59.322 41.667 3.59 9.71 36.59 3.21
5721 6011 4.857799 TGTTAACACTACGACGAATGTGA 58.142 39.130 19.72 5.58 34.81 3.58
5722 6012 4.913345 TGTTAACACTACGACGAATGTGAG 59.087 41.667 19.72 4.26 34.81 3.51
5723 6013 3.637998 AACACTACGACGAATGTGAGT 57.362 42.857 19.72 9.21 34.81 3.41
5724 6014 4.754372 AACACTACGACGAATGTGAGTA 57.246 40.909 19.72 0.00 34.81 2.59
5725 6015 4.754372 ACACTACGACGAATGTGAGTAA 57.246 40.909 19.72 0.00 34.81 2.24
5726 6016 4.470462 ACACTACGACGAATGTGAGTAAC 58.530 43.478 19.72 0.00 34.81 2.50
5727 6017 4.023792 ACACTACGACGAATGTGAGTAACA 60.024 41.667 19.72 0.00 44.79 2.41
5742 6032 5.224888 TGAGTAACACAAGTATCACGTTCC 58.775 41.667 0.00 0.00 0.00 3.62
5743 6033 4.563061 AGTAACACAAGTATCACGTTCCC 58.437 43.478 0.00 0.00 0.00 3.97
5744 6034 2.467566 ACACAAGTATCACGTTCCCC 57.532 50.000 0.00 0.00 0.00 4.81
5745 6035 1.695242 ACACAAGTATCACGTTCCCCA 59.305 47.619 0.00 0.00 0.00 4.96
5746 6036 2.304761 ACACAAGTATCACGTTCCCCAT 59.695 45.455 0.00 0.00 0.00 4.00
5747 6037 3.516300 ACACAAGTATCACGTTCCCCATA 59.484 43.478 0.00 0.00 0.00 2.74
5748 6038 3.869246 CACAAGTATCACGTTCCCCATAC 59.131 47.826 0.00 0.00 0.00 2.39
5749 6039 3.773119 ACAAGTATCACGTTCCCCATACT 59.227 43.478 0.00 0.00 34.21 2.12
5750 6040 4.957954 ACAAGTATCACGTTCCCCATACTA 59.042 41.667 0.00 0.00 32.05 1.82
5751 6041 5.422970 ACAAGTATCACGTTCCCCATACTAA 59.577 40.000 0.00 0.00 32.05 2.24
5752 6042 6.099269 ACAAGTATCACGTTCCCCATACTAAT 59.901 38.462 0.00 0.00 32.05 1.73
5753 6043 6.742559 AGTATCACGTTCCCCATACTAATT 57.257 37.500 0.00 0.00 31.58 1.40
5754 6044 7.133133 AGTATCACGTTCCCCATACTAATTT 57.867 36.000 0.00 0.00 31.58 1.82
5755 6045 7.571025 AGTATCACGTTCCCCATACTAATTTT 58.429 34.615 0.00 0.00 31.58 1.82
5756 6046 6.693315 ATCACGTTCCCCATACTAATTTTG 57.307 37.500 0.00 0.00 0.00 2.44
5757 6047 5.806818 TCACGTTCCCCATACTAATTTTGA 58.193 37.500 0.00 0.00 0.00 2.69
5758 6048 6.419791 TCACGTTCCCCATACTAATTTTGAT 58.580 36.000 0.00 0.00 0.00 2.57
5759 6049 6.540914 TCACGTTCCCCATACTAATTTTGATC 59.459 38.462 0.00 0.00 0.00 2.92
5760 6050 6.542370 CACGTTCCCCATACTAATTTTGATCT 59.458 38.462 0.00 0.00 0.00 2.75
5761 6051 6.766467 ACGTTCCCCATACTAATTTTGATCTC 59.234 38.462 0.00 0.00 0.00 2.75
5762 6052 6.992715 CGTTCCCCATACTAATTTTGATCTCT 59.007 38.462 0.00 0.00 0.00 3.10
5763 6053 7.171678 CGTTCCCCATACTAATTTTGATCTCTC 59.828 40.741 0.00 0.00 0.00 3.20
5764 6054 7.937700 TCCCCATACTAATTTTGATCTCTCT 57.062 36.000 0.00 0.00 0.00 3.10
5765 6055 9.447279 TTCCCCATACTAATTTTGATCTCTCTA 57.553 33.333 0.00 0.00 0.00 2.43
5766 6056 9.447279 TCCCCATACTAATTTTGATCTCTCTAA 57.553 33.333 0.00 0.00 0.00 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.110192 GCAGACTGTAAAGCGCAACC 60.110 55.000 11.47 0.00 0.00 3.77
1 2 0.451135 CGCAGACTGTAAAGCGCAAC 60.451 55.000 11.47 5.27 43.80 4.17
2 3 1.859398 CGCAGACTGTAAAGCGCAA 59.141 52.632 11.47 0.00 43.80 4.85
20 21 3.120649 CCAGCTTTTGTAGTAACTCGTGC 60.121 47.826 0.00 0.00 0.00 5.34
80 93 0.796870 GTTTACGCCGGCTTGATTGC 60.797 55.000 26.68 4.69 0.00 3.56
116 129 1.788308 CGTCTCGCTTTCGGTTAACAA 59.212 47.619 8.10 0.00 36.13 2.83
117 130 1.001487 TCGTCTCGCTTTCGGTTAACA 60.001 47.619 8.10 0.00 36.13 2.41
139 158 4.563786 GGTCTCTTTTCTCGAGGTGGATTT 60.564 45.833 13.56 0.00 0.00 2.17
140 159 3.055747 GGTCTCTTTTCTCGAGGTGGATT 60.056 47.826 13.56 0.00 0.00 3.01
188 207 2.125753 CGCCTGTCACAGAGAGCC 60.126 66.667 6.30 0.00 32.44 4.70
192 211 4.767255 GGCCCGCCTGTCACAGAG 62.767 72.222 6.30 0.00 32.44 3.35
480 552 4.704833 TTGTGCTCCCTCTGGCGC 62.705 66.667 0.00 0.00 42.93 6.53
495 567 1.680735 CCTCCTCGTCCTGATCTCTTG 59.319 57.143 0.00 0.00 0.00 3.02
516 588 1.813753 GGCGAGCCGTTATGCTTCA 60.814 57.895 0.00 0.00 42.95 3.02
585 682 3.461773 GCCTACGCTCCCAGCAGA 61.462 66.667 0.00 0.00 42.58 4.26
678 777 1.080705 CTCACCTCACCCGTCGTTC 60.081 63.158 0.00 0.00 0.00 3.95
679 778 2.571216 CCTCACCTCACCCGTCGTT 61.571 63.158 0.00 0.00 0.00 3.85
681 780 2.989824 ACCTCACCTCACCCGTCG 60.990 66.667 0.00 0.00 0.00 5.12
729 835 2.286197 AAGTAGCCCACCTCCCCC 60.286 66.667 0.00 0.00 0.00 5.40
759 865 3.009714 GGGGAGCGGAAGAAGGGT 61.010 66.667 0.00 0.00 0.00 4.34
770 876 2.103373 GGAAGAAATGGAAAGGGGAGC 58.897 52.381 0.00 0.00 0.00 4.70
960 1087 4.021104 ACAAGAGATCCGACTTTCACATCA 60.021 41.667 0.00 0.00 0.00 3.07
1013 1140 1.538950 GAGGAAGAAGCAACCAAGCAG 59.461 52.381 0.00 0.00 36.85 4.24
1031 1161 3.134458 AGAAGAAAAGTGCGACAAGGAG 58.866 45.455 0.00 0.00 0.00 3.69
1042 1172 7.283354 CCTCAAACTTAACCAGAGAAGAAAAGT 59.717 37.037 0.00 0.00 0.00 2.66
1045 1175 6.542370 CACCTCAAACTTAACCAGAGAAGAAA 59.458 38.462 0.00 0.00 0.00 2.52
1088 1218 4.689549 TCGCCCAACTCCTCGGGA 62.690 66.667 0.00 0.00 46.34 5.14
1089 1219 4.148825 CTCGCCCAACTCCTCGGG 62.149 72.222 0.00 0.00 46.15 5.14
1091 1221 4.148825 CCCTCGCCCAACTCCTCG 62.149 72.222 0.00 0.00 0.00 4.63
1158 1290 2.630580 TCGGGCAGCCAAAATAAAAACT 59.369 40.909 15.19 0.00 0.00 2.66
1170 1302 1.895707 CTCCATCAATCGGGCAGCC 60.896 63.158 1.26 1.26 0.00 4.85
1230 1362 2.422832 GCAAGAAAGGCATCTCTTGGAG 59.577 50.000 15.61 0.00 45.71 3.86
1287 1419 6.569801 CGGAGATTTGATACGATTAGCTACCA 60.570 42.308 0.00 0.00 0.00 3.25
1327 1459 8.548721 CCGAATCAATTAGGACAAACATACTAC 58.451 37.037 0.00 0.00 34.90 2.73
1368 1503 4.054671 CGATCCTCCACAATTCTAAGCTC 58.945 47.826 0.00 0.00 0.00 4.09
1387 1525 2.076863 GCTGTGAGGTTTGTAAGCGAT 58.923 47.619 0.00 0.00 0.00 4.58
1388 1526 1.070134 AGCTGTGAGGTTTGTAAGCGA 59.930 47.619 0.00 0.00 35.82 4.93
1442 1580 7.871853 ACAACGAAAATAAAGCTTACTGACAT 58.128 30.769 0.00 0.00 0.00 3.06
1464 1602 4.023291 AGAAAGGAAGCAGGTTTTGACAA 58.977 39.130 0.00 0.00 0.00 3.18
1557 1695 4.021544 GGGCACAAGAACAATTATTCCACA 60.022 41.667 0.00 0.00 0.00 4.17
1564 1702 3.013921 GGATCGGGCACAAGAACAATTA 58.986 45.455 0.00 0.00 0.00 1.40
1567 1705 0.109532 TGGATCGGGCACAAGAACAA 59.890 50.000 0.00 0.00 0.00 2.83
1598 1752 2.174360 AGGCCAGAAAAATCCAAGCTC 58.826 47.619 5.01 0.00 0.00 4.09
1600 1754 3.407424 AAAGGCCAGAAAAATCCAAGC 57.593 42.857 5.01 0.00 0.00 4.01
1641 1798 8.551440 TGAGAGAAGGGAAATAAAATCATCTGA 58.449 33.333 0.00 0.00 0.00 3.27
1642 1799 8.743085 TGAGAGAAGGGAAATAAAATCATCTG 57.257 34.615 0.00 0.00 0.00 2.90
1644 1801 8.744568 ACTGAGAGAAGGGAAATAAAATCATC 57.255 34.615 0.00 0.00 0.00 2.92
1645 1802 8.964772 CAACTGAGAGAAGGGAAATAAAATCAT 58.035 33.333 0.00 0.00 0.00 2.45
1646 1803 7.944554 ACAACTGAGAGAAGGGAAATAAAATCA 59.055 33.333 0.00 0.00 0.00 2.57
1647 1804 8.239998 CACAACTGAGAGAAGGGAAATAAAATC 58.760 37.037 0.00 0.00 0.00 2.17
1648 1805 7.725844 ACACAACTGAGAGAAGGGAAATAAAAT 59.274 33.333 0.00 0.00 0.00 1.82
1649 1806 7.060421 ACACAACTGAGAGAAGGGAAATAAAA 58.940 34.615 0.00 0.00 0.00 1.52
1653 1810 4.713792 ACACAACTGAGAGAAGGGAAAT 57.286 40.909 0.00 0.00 0.00 2.17
1664 1821 4.333649 TCAAAGCTTCAGAACACAACTGAG 59.666 41.667 0.00 0.00 43.67 3.35
1698 1855 2.551459 CTGCACCTTCTTCTTCACCTTG 59.449 50.000 0.00 0.00 0.00 3.61
1725 1882 3.627395 TCTTTGCCATATTCGGTGTCT 57.373 42.857 0.00 0.00 0.00 3.41
1732 1889 5.394553 CCACTTCCCTTTCTTTGCCATATTC 60.395 44.000 0.00 0.00 0.00 1.75
1905 2065 0.737715 CAGTCTACAGGTCGCCAAGC 60.738 60.000 0.00 0.00 0.00 4.01
1906 2066 0.888619 TCAGTCTACAGGTCGCCAAG 59.111 55.000 0.00 0.00 0.00 3.61
1912 2072 2.165437 CTGCCTTCTCAGTCTACAGGTC 59.835 54.545 0.00 0.00 0.00 3.85
1941 2101 2.034878 GGCCATTTCCTCCTGGATTTC 58.965 52.381 0.00 0.00 42.81 2.17
1948 2108 1.870064 CCAAATGGCCATTTCCTCCT 58.130 50.000 35.67 15.90 38.84 3.69
2106 2266 4.004314 TGTTTTGTTCACTCTCCGTTTCA 58.996 39.130 0.00 0.00 0.00 2.69
2142 2302 4.748679 GCAGAGGCAAGCGCAACG 62.749 66.667 11.47 0.00 41.24 4.10
2327 2487 1.826327 CAAGCAATAAACATCCCGCG 58.174 50.000 0.00 0.00 0.00 6.46
2380 2540 4.468095 GGTTGCTATTGTATTGCTACCG 57.532 45.455 9.76 0.00 43.45 4.02
2450 2610 2.717580 TCTTACGTGCATGTTCTCGT 57.282 45.000 18.34 10.05 39.18 4.18
2451 2611 2.923655 ACATCTTACGTGCATGTTCTCG 59.076 45.455 18.34 3.38 0.00 4.04
2452 2612 3.926527 TGACATCTTACGTGCATGTTCTC 59.073 43.478 18.34 4.00 30.71 2.87
2453 2613 3.925379 TGACATCTTACGTGCATGTTCT 58.075 40.909 18.34 0.00 30.71 3.01
2454 2614 3.484229 GCTGACATCTTACGTGCATGTTC 60.484 47.826 18.34 8.03 30.71 3.18
2455 2615 2.416547 GCTGACATCTTACGTGCATGTT 59.583 45.455 18.34 0.00 30.71 2.71
2456 2616 2.002586 GCTGACATCTTACGTGCATGT 58.997 47.619 17.19 17.19 33.32 3.21
2457 2617 1.328680 GGCTGACATCTTACGTGCATG 59.671 52.381 3.82 3.82 0.00 4.06
2458 2618 1.208052 AGGCTGACATCTTACGTGCAT 59.792 47.619 0.00 0.00 0.00 3.96
2459 2619 0.608130 AGGCTGACATCTTACGTGCA 59.392 50.000 0.00 0.00 0.00 4.57
2460 2620 1.002366 CAGGCTGACATCTTACGTGC 58.998 55.000 9.42 0.00 0.00 5.34
2461 2621 1.066858 ACCAGGCTGACATCTTACGTG 60.067 52.381 17.94 0.00 0.00 4.49
2462 2622 1.267121 ACCAGGCTGACATCTTACGT 58.733 50.000 17.94 0.00 0.00 3.57
2493 2653 6.889722 CCAACCAAATCAGGTATCTTAAAGGA 59.110 38.462 0.00 0.00 42.25 3.36
2538 2702 6.057533 GGACCAACTGACATGATAATGATGA 58.942 40.000 0.00 0.00 0.00 2.92
2566 2730 3.428045 GCACAATCTTGGCTGTATTCCAC 60.428 47.826 0.00 0.00 32.45 4.02
2620 2784 5.449113 GCGTGTAAGAACATCAAAATCATCG 59.551 40.000 0.00 0.00 38.08 3.84
2643 2807 8.441608 GTCATATCATCACTCACATTCTTATGC 58.558 37.037 0.00 0.00 35.03 3.14
2644 2808 9.485206 TGTCATATCATCACTCACATTCTTATG 57.515 33.333 0.00 0.00 37.79 1.90
2646 2810 7.654923 GCTGTCATATCATCACTCACATTCTTA 59.345 37.037 0.00 0.00 0.00 2.10
2649 2813 5.990386 AGCTGTCATATCATCACTCACATTC 59.010 40.000 0.00 0.00 0.00 2.67
2650 2814 5.758784 CAGCTGTCATATCATCACTCACATT 59.241 40.000 5.25 0.00 0.00 2.71
2651 2815 5.070047 TCAGCTGTCATATCATCACTCACAT 59.930 40.000 14.67 0.00 0.00 3.21
2654 2818 5.603170 TTCAGCTGTCATATCATCACTCA 57.397 39.130 14.67 0.00 0.00 3.41
2655 2819 8.599055 TTTATTCAGCTGTCATATCATCACTC 57.401 34.615 14.67 0.00 0.00 3.51
2656 2820 8.969260 TTTTATTCAGCTGTCATATCATCACT 57.031 30.769 14.67 0.00 0.00 3.41
2714 2880 6.427242 CCCAAGAAGTACAGTTTAAGAGTTCC 59.573 42.308 0.00 0.00 0.00 3.62
2767 2933 3.633525 AGCACTGAATGTCACACAACAAT 59.366 39.130 0.00 0.00 31.81 2.71
2770 2936 4.273480 AGTTAGCACTGAATGTCACACAAC 59.727 41.667 0.00 0.00 0.00 3.32
2778 2944 7.573968 AAAAAGAAGAGTTAGCACTGAATGT 57.426 32.000 0.00 0.00 31.22 2.71
2805 2971 9.555727 TGAGTAACTAATCAATTTATACTGCCC 57.444 33.333 0.00 0.00 0.00 5.36
2892 3058 3.953712 TCCATCAACTAGCGACTTCAA 57.046 42.857 0.00 0.00 0.00 2.69
3062 3228 3.461946 GTGCTCACCTTCATTTTCTCG 57.538 47.619 0.00 0.00 0.00 4.04
3084 3250 5.685954 GGCTTGCAAGTACTACTTCAAAAAC 59.314 40.000 26.55 4.83 36.03 2.43
3093 3259 4.130286 AGATGAGGCTTGCAAGTACTAC 57.870 45.455 26.55 17.50 0.00 2.73
3121 3287 4.274602 TGCTGTAGTTTTATGTTCGGGA 57.725 40.909 0.00 0.00 0.00 5.14
3122 3288 5.048991 AGTTTGCTGTAGTTTTATGTTCGGG 60.049 40.000 0.00 0.00 0.00 5.14
3123 3289 5.997385 AGTTTGCTGTAGTTTTATGTTCGG 58.003 37.500 0.00 0.00 0.00 4.30
3124 3290 6.736853 GCTAGTTTGCTGTAGTTTTATGTTCG 59.263 38.462 0.00 0.00 0.00 3.95
3125 3291 7.021790 GGCTAGTTTGCTGTAGTTTTATGTTC 58.978 38.462 0.00 0.00 0.00 3.18
3126 3292 6.072119 GGGCTAGTTTGCTGTAGTTTTATGTT 60.072 38.462 0.00 0.00 0.00 2.71
3127 3293 5.414765 GGGCTAGTTTGCTGTAGTTTTATGT 59.585 40.000 0.00 0.00 0.00 2.29
3130 3296 4.042435 AGGGGCTAGTTTGCTGTAGTTTTA 59.958 41.667 0.00 0.00 0.00 1.52
3132 3298 2.375509 AGGGGCTAGTTTGCTGTAGTTT 59.624 45.455 0.00 0.00 0.00 2.66
3134 3300 1.279271 CAGGGGCTAGTTTGCTGTAGT 59.721 52.381 0.00 0.00 0.00 2.73
3135 3301 1.279271 ACAGGGGCTAGTTTGCTGTAG 59.721 52.381 0.00 0.00 0.00 2.74
3137 3303 0.250901 CACAGGGGCTAGTTTGCTGT 60.251 55.000 0.00 0.00 0.00 4.40
3138 3304 0.962356 CCACAGGGGCTAGTTTGCTG 60.962 60.000 0.00 0.00 0.00 4.41
3139 3305 1.380302 CCACAGGGGCTAGTTTGCT 59.620 57.895 0.00 0.00 0.00 3.91
3140 3306 0.539669 AACCACAGGGGCTAGTTTGC 60.540 55.000 0.00 0.00 42.05 3.68
3141 3307 1.995376 AAACCACAGGGGCTAGTTTG 58.005 50.000 0.00 0.00 42.05 2.93
3142 3308 2.767644 AAAACCACAGGGGCTAGTTT 57.232 45.000 0.00 0.00 42.05 2.66
3143 3309 2.177016 AGAAAAACCACAGGGGCTAGTT 59.823 45.455 0.00 0.00 42.05 2.24
3144 3310 1.780919 AGAAAAACCACAGGGGCTAGT 59.219 47.619 0.00 0.00 42.05 2.57
3145 3311 2.586648 AGAAAAACCACAGGGGCTAG 57.413 50.000 0.00 0.00 42.05 3.42
3146 3312 4.456662 TTAAGAAAAACCACAGGGGCTA 57.543 40.909 0.00 0.00 42.05 3.93
3147 3313 3.322191 TTAAGAAAAACCACAGGGGCT 57.678 42.857 0.00 0.00 42.05 5.19
3148 3314 4.617253 ATTTAAGAAAAACCACAGGGGC 57.383 40.909 0.00 0.00 42.05 5.80
3149 3315 7.732025 ACTTAATTTAAGAAAAACCACAGGGG 58.268 34.615 20.33 0.00 39.92 4.79
3150 3316 9.908152 CTACTTAATTTAAGAAAAACCACAGGG 57.092 33.333 20.33 0.00 39.09 4.45
3163 3329 8.752766 TCGTGGTTGTCTCTACTTAATTTAAG 57.247 34.615 13.44 13.44 41.51 1.85
3165 3331 7.318141 CCTCGTGGTTGTCTCTACTTAATTTA 58.682 38.462 0.00 0.00 0.00 1.40
3169 3335 3.057033 GCCTCGTGGTTGTCTCTACTTAA 60.057 47.826 5.26 0.00 35.27 1.85
3173 3339 0.601558 TGCCTCGTGGTTGTCTCTAC 59.398 55.000 5.26 0.00 35.27 2.59
3174 3340 0.601558 GTGCCTCGTGGTTGTCTCTA 59.398 55.000 5.26 0.00 35.27 2.43
3178 3344 2.668550 GGGTGCCTCGTGGTTGTC 60.669 66.667 5.26 0.00 35.27 3.18
3201 3367 2.349755 GTTCGGGCCCTGTGCTAA 59.650 61.111 22.43 1.18 40.92 3.09
3202 3368 4.077184 CGTTCGGGCCCTGTGCTA 62.077 66.667 22.43 0.00 40.92 3.49
3248 3414 2.125106 GTTGGCTAGAGGTGCGGG 60.125 66.667 0.00 0.00 0.00 6.13
3249 3415 1.448540 CAGTTGGCTAGAGGTGCGG 60.449 63.158 0.00 0.00 0.00 5.69
3270 3436 3.981416 TGAAGAACTGAAACTGATCGTCG 59.019 43.478 0.00 0.00 0.00 5.12
3306 3472 9.878599 CGAATACAAACAACAAAGAAATACTCT 57.121 29.630 0.00 0.00 35.13 3.24
3307 3473 9.872757 TCGAATACAAACAACAAAGAAATACTC 57.127 29.630 0.00 0.00 0.00 2.59
3311 3477 9.840427 CCTATCGAATACAAACAACAAAGAAAT 57.160 29.630 0.00 0.00 0.00 2.17
3312 3478 7.806014 GCCTATCGAATACAAACAACAAAGAAA 59.194 33.333 0.00 0.00 0.00 2.52
3313 3479 7.041030 TGCCTATCGAATACAAACAACAAAGAA 60.041 33.333 0.00 0.00 0.00 2.52
3314 3480 6.428465 TGCCTATCGAATACAAACAACAAAGA 59.572 34.615 0.00 0.00 0.00 2.52
3315 3481 6.607689 TGCCTATCGAATACAAACAACAAAG 58.392 36.000 0.00 0.00 0.00 2.77
3316 3482 6.561737 TGCCTATCGAATACAAACAACAAA 57.438 33.333 0.00 0.00 0.00 2.83
3317 3483 6.597672 AGATGCCTATCGAATACAAACAACAA 59.402 34.615 0.00 0.00 38.38 2.83
3318 3484 6.112734 AGATGCCTATCGAATACAAACAACA 58.887 36.000 0.00 0.00 38.38 3.33
3319 3485 6.604735 AGATGCCTATCGAATACAAACAAC 57.395 37.500 0.00 0.00 38.38 3.32
3320 3486 8.201464 TCTAAGATGCCTATCGAATACAAACAA 58.799 33.333 0.00 0.00 38.38 2.83
3321 3487 7.722363 TCTAAGATGCCTATCGAATACAAACA 58.278 34.615 0.00 0.00 38.38 2.83
3322 3488 8.651588 CATCTAAGATGCCTATCGAATACAAAC 58.348 37.037 0.00 0.00 38.38 2.93
3323 3489 7.819415 CCATCTAAGATGCCTATCGAATACAAA 59.181 37.037 0.00 0.00 38.38 2.83
3324 3490 7.323420 CCATCTAAGATGCCTATCGAATACAA 58.677 38.462 0.00 0.00 38.38 2.41
3325 3491 6.628175 GCCATCTAAGATGCCTATCGAATACA 60.628 42.308 0.00 0.00 38.38 2.29
3326 3492 5.751028 GCCATCTAAGATGCCTATCGAATAC 59.249 44.000 0.00 0.00 38.38 1.89
3327 3493 5.658634 AGCCATCTAAGATGCCTATCGAATA 59.341 40.000 0.00 0.00 38.38 1.75
3328 3494 4.469227 AGCCATCTAAGATGCCTATCGAAT 59.531 41.667 0.00 0.00 38.38 3.34
3329 3495 3.834813 AGCCATCTAAGATGCCTATCGAA 59.165 43.478 0.00 0.00 38.38 3.71
3330 3496 3.435275 AGCCATCTAAGATGCCTATCGA 58.565 45.455 0.00 0.00 38.38 3.59
3331 3497 3.883830 AGCCATCTAAGATGCCTATCG 57.116 47.619 0.00 0.00 38.38 2.92
3332 3498 5.105716 TCGTTAGCCATCTAAGATGCCTATC 60.106 44.000 0.00 0.00 35.60 2.08
3333 3499 4.772624 TCGTTAGCCATCTAAGATGCCTAT 59.227 41.667 0.00 0.00 35.60 2.57
3334 3500 4.149598 TCGTTAGCCATCTAAGATGCCTA 58.850 43.478 0.00 0.00 35.60 3.93
3335 3501 2.965831 TCGTTAGCCATCTAAGATGCCT 59.034 45.455 0.00 0.00 35.60 4.75
3336 3502 3.386768 TCGTTAGCCATCTAAGATGCC 57.613 47.619 0.00 0.00 35.60 4.40
3337 3503 5.233988 AGATTCGTTAGCCATCTAAGATGC 58.766 41.667 0.00 0.00 35.60 3.91
3338 3504 8.994429 AATAGATTCGTTAGCCATCTAAGATG 57.006 34.615 0.00 0.00 35.60 2.90
3342 3508 9.706691 CCTAAAATAGATTCGTTAGCCATCTAA 57.293 33.333 0.00 0.00 34.06 2.10
3343 3509 7.817962 GCCTAAAATAGATTCGTTAGCCATCTA 59.182 37.037 0.00 0.00 34.70 1.98
3344 3510 6.651225 GCCTAAAATAGATTCGTTAGCCATCT 59.349 38.462 0.00 0.00 0.00 2.90
3345 3511 6.426937 TGCCTAAAATAGATTCGTTAGCCATC 59.573 38.462 0.00 0.00 0.00 3.51
3346 3512 6.296026 TGCCTAAAATAGATTCGTTAGCCAT 58.704 36.000 0.00 0.00 0.00 4.40
3347 3513 5.676552 TGCCTAAAATAGATTCGTTAGCCA 58.323 37.500 0.00 0.00 0.00 4.75
3348 3514 6.803154 ATGCCTAAAATAGATTCGTTAGCC 57.197 37.500 0.00 0.00 0.00 3.93
3349 3515 8.228464 GGTAATGCCTAAAATAGATTCGTTAGC 58.772 37.037 0.00 0.00 0.00 3.09
3444 3620 6.704493 GGTATTAATCGAAACCATGTAGAGCA 59.296 38.462 0.00 0.00 32.04 4.26
3445 3621 6.704493 TGGTATTAATCGAAACCATGTAGAGC 59.296 38.462 4.05 0.00 37.09 4.09
3446 3622 7.926555 ACTGGTATTAATCGAAACCATGTAGAG 59.073 37.037 8.02 0.08 41.04 2.43
3447 3623 7.788026 ACTGGTATTAATCGAAACCATGTAGA 58.212 34.615 8.02 0.00 41.04 2.59
3448 3624 9.537192 TTACTGGTATTAATCGAAACCATGTAG 57.463 33.333 8.02 0.96 41.04 2.74
3526 3706 9.693739 TGCCAAGAAAGTTGGATATTATAGAAA 57.306 29.630 7.99 0.00 42.06 2.52
3527 3707 9.342308 CTGCCAAGAAAGTTGGATATTATAGAA 57.658 33.333 7.99 0.00 42.06 2.10
3528 3708 8.713971 TCTGCCAAGAAAGTTGGATATTATAGA 58.286 33.333 7.99 0.00 42.06 1.98
3529 3709 8.908786 TCTGCCAAGAAAGTTGGATATTATAG 57.091 34.615 7.99 0.00 42.06 1.31
3530 3710 9.866655 AATCTGCCAAGAAAGTTGGATATTATA 57.133 29.630 7.99 0.00 42.06 0.98
3531 3711 8.636213 CAATCTGCCAAGAAAGTTGGATATTAT 58.364 33.333 7.99 0.00 42.06 1.28
3532 3712 7.833682 TCAATCTGCCAAGAAAGTTGGATATTA 59.166 33.333 7.99 0.00 42.06 0.98
3533 3713 6.664816 TCAATCTGCCAAGAAAGTTGGATATT 59.335 34.615 7.99 1.44 42.06 1.28
3534 3714 6.189859 TCAATCTGCCAAGAAAGTTGGATAT 58.810 36.000 7.99 0.00 42.06 1.63
3535 3715 5.569355 TCAATCTGCCAAGAAAGTTGGATA 58.431 37.500 7.99 0.00 42.06 2.59
3652 3832 4.806330 CCTGATGAGAAAATGCATATGCC 58.194 43.478 24.54 8.92 41.18 4.40
3682 3862 1.338020 CAGGGGAACACACAAAGAAGC 59.662 52.381 0.00 0.00 0.00 3.86
3691 3871 1.774254 ACAAGACATCAGGGGAACACA 59.226 47.619 0.00 0.00 0.00 3.72
3692 3872 2.568623 ACAAGACATCAGGGGAACAC 57.431 50.000 0.00 0.00 0.00 3.32
3693 3873 3.248024 AGTACAAGACATCAGGGGAACA 58.752 45.455 0.00 0.00 0.00 3.18
3694 3874 3.983044 AGTACAAGACATCAGGGGAAC 57.017 47.619 0.00 0.00 0.00 3.62
3715 3895 2.423538 GCAAGGAACACACAACAGAAGT 59.576 45.455 0.00 0.00 0.00 3.01
3716 3896 2.684881 AGCAAGGAACACACAACAGAAG 59.315 45.455 0.00 0.00 0.00 2.85
3717 3897 2.722094 AGCAAGGAACACACAACAGAA 58.278 42.857 0.00 0.00 0.00 3.02
3729 3909 9.969001 ACAATTATAGTAGGTAAAAGCAAGGAA 57.031 29.630 0.00 0.00 0.00 3.36
3748 3928 6.751514 TGCTGGACGAAACAATACAATTAT 57.248 33.333 0.00 0.00 0.00 1.28
3762 3942 7.447545 AGAAATACTACTACATATGCTGGACGA 59.552 37.037 1.58 0.00 0.00 4.20
3765 3945 8.706322 TGAGAAATACTACTACATATGCTGGA 57.294 34.615 1.58 0.00 0.00 3.86
3766 3946 9.935241 AATGAGAAATACTACTACATATGCTGG 57.065 33.333 1.58 0.00 0.00 4.85
3964 4145 3.269178 GCTGGGATTCTTTGTCAGAGAG 58.731 50.000 0.00 0.00 31.12 3.20
3965 4146 2.639347 TGCTGGGATTCTTTGTCAGAGA 59.361 45.455 0.00 0.00 31.12 3.10
4169 4350 2.039818 ATGCTTGTGATGCTCCTCAG 57.960 50.000 0.00 0.00 0.00 3.35
4348 4535 1.969923 ACCAGAGATGCTCTATCAGGC 59.030 52.381 0.00 0.00 38.99 4.85
4525 4712 3.853330 CGGCGCCTGACGTTGATG 61.853 66.667 26.68 0.00 43.37 3.07
4541 4728 4.021981 TGGATCTAGCAATCATAGGTGACG 60.022 45.833 0.00 0.00 37.14 4.35
4819 5011 9.049050 TGGTTAATAGTAGTAGGAATCCAAACA 57.951 33.333 0.61 0.00 0.00 2.83
4836 5028 6.866480 ACATTTCAAGCATGGTGGTTAATAG 58.134 36.000 0.00 0.00 35.69 1.73
4950 5145 0.773644 ACCAACTCAGGATGCCAAGT 59.226 50.000 0.00 0.00 34.76 3.16
4996 5191 1.138661 TGCAAGCCAACTGGGAAAAAG 59.861 47.619 0.00 0.00 40.01 2.27
5122 5340 7.392953 TGTTGCAATCTGATTGGTAACTGAATA 59.607 33.333 26.67 8.62 40.57 1.75
5140 5359 3.696051 ACGCTTCATAATCCTGTTGCAAT 59.304 39.130 0.59 0.00 0.00 3.56
5175 5394 0.035056 ACCACAAGCTACAGCCCATC 60.035 55.000 0.00 0.00 43.38 3.51
5178 5399 1.675641 CCACCACAAGCTACAGCCC 60.676 63.158 0.00 0.00 43.38 5.19
5218 5441 6.655003 AGCGAATTTGGTGATAGAAAGAAAGA 59.345 34.615 0.00 0.00 0.00 2.52
5219 5442 6.846350 AGCGAATTTGGTGATAGAAAGAAAG 58.154 36.000 0.00 0.00 0.00 2.62
5220 5443 6.817765 AGCGAATTTGGTGATAGAAAGAAA 57.182 33.333 0.00 0.00 0.00 2.52
5320 5550 1.838077 GTGCTTAGGGAGTACCACCAT 59.162 52.381 0.00 3.10 43.89 3.55
5423 5713 5.092554 TGGAAAACGCATTGGTAGATCTA 57.907 39.130 0.00 0.00 0.00 1.98
5438 5728 6.422400 TGTGAGGCGATTTAAAAATGGAAAAC 59.578 34.615 2.10 0.00 0.00 2.43
5440 5730 6.090483 TGTGAGGCGATTTAAAAATGGAAA 57.910 33.333 2.10 0.00 0.00 3.13
5443 5733 6.332630 AGAATGTGAGGCGATTTAAAAATGG 58.667 36.000 0.00 0.00 0.00 3.16
5465 5755 5.353394 AACTGTAGAACCACAACTGAAGA 57.647 39.130 0.00 0.00 0.00 2.87
5470 5760 3.646637 AGCCTAACTGTAGAACCACAACT 59.353 43.478 0.00 0.00 0.00 3.16
5480 5770 7.600752 GCCTAAGATATCAAAGCCTAACTGTAG 59.399 40.741 5.32 0.00 0.00 2.74
5482 5772 6.100424 AGCCTAAGATATCAAAGCCTAACTGT 59.900 38.462 5.32 0.00 0.00 3.55
5488 5778 4.712476 CACAGCCTAAGATATCAAAGCCT 58.288 43.478 5.32 0.00 0.00 4.58
5490 5780 4.024218 CAGCACAGCCTAAGATATCAAAGC 60.024 45.833 5.32 2.40 0.00 3.51
5491 5781 5.007430 CACAGCACAGCCTAAGATATCAAAG 59.993 44.000 5.32 1.55 0.00 2.77
5501 5791 0.472044 TGGTTCACAGCACAGCCTAA 59.528 50.000 0.00 0.00 0.00 2.69
5510 5800 6.753744 GGAAGAAATTATGAATGGTTCACAGC 59.246 38.462 0.00 0.00 43.48 4.40
5519 5809 7.094032 GGCCTAGATGGGAAGAAATTATGAATG 60.094 40.741 0.00 0.00 36.00 2.67
5567 5857 9.953697 AGTAATACAAGTGTTATTTCGCAAAAA 57.046 25.926 0.00 0.00 0.00 1.94
5568 5858 9.601971 GAGTAATACAAGTGTTATTTCGCAAAA 57.398 29.630 0.00 0.00 0.00 2.44
5569 5859 8.775527 TGAGTAATACAAGTGTTATTTCGCAAA 58.224 29.630 0.00 0.00 0.00 3.68
5570 5860 8.312896 TGAGTAATACAAGTGTTATTTCGCAA 57.687 30.769 0.00 0.00 0.00 4.85
5571 5861 7.892778 TGAGTAATACAAGTGTTATTTCGCA 57.107 32.000 0.00 0.00 0.00 5.10
5572 5862 8.653338 TCTTGAGTAATACAAGTGTTATTTCGC 58.347 33.333 0.00 0.00 43.30 4.70
5599 5889 9.530633 GTCAGACGATATTGTAATCCTTAAACT 57.469 33.333 0.00 0.00 0.00 2.66
5600 5890 9.309516 TGTCAGACGATATTGTAATCCTTAAAC 57.690 33.333 0.00 0.00 0.00 2.01
5601 5891 9.878667 TTGTCAGACGATATTGTAATCCTTAAA 57.121 29.630 0.00 0.00 0.00 1.52
5609 5899 9.476202 CCTGAATATTGTCAGACGATATTGTAA 57.524 33.333 29.74 18.29 46.76 2.41
5610 5900 8.088365 CCCTGAATATTGTCAGACGATATTGTA 58.912 37.037 29.74 20.36 46.76 2.41
5611 5901 6.931281 CCCTGAATATTGTCAGACGATATTGT 59.069 38.462 29.74 14.86 46.76 2.71
5612 5902 6.128445 GCCCTGAATATTGTCAGACGATATTG 60.128 42.308 29.74 19.97 46.76 1.90
5613 5903 5.934625 GCCCTGAATATTGTCAGACGATATT 59.065 40.000 26.75 26.75 46.76 1.28
5614 5904 5.247110 AGCCCTGAATATTGTCAGACGATAT 59.753 40.000 15.38 15.38 46.76 1.63
5615 5905 4.588951 AGCCCTGAATATTGTCAGACGATA 59.411 41.667 12.26 12.26 46.76 2.92
5616 5906 3.389329 AGCCCTGAATATTGTCAGACGAT 59.611 43.478 8.45 8.45 46.76 3.73
5617 5907 2.766263 AGCCCTGAATATTGTCAGACGA 59.234 45.455 6.06 0.00 46.76 4.20
5618 5908 3.185246 AGCCCTGAATATTGTCAGACG 57.815 47.619 6.06 0.00 46.76 4.18
5619 5909 3.879892 GGAAGCCCTGAATATTGTCAGAC 59.120 47.826 6.06 0.00 46.76 3.51
5620 5910 3.782523 AGGAAGCCCTGAATATTGTCAGA 59.217 43.478 6.06 0.00 46.76 3.27
5621 5911 4.133078 GAGGAAGCCCTGAATATTGTCAG 58.867 47.826 0.00 0.00 44.53 3.51
5622 5912 3.782523 AGAGGAAGCCCTGAATATTGTCA 59.217 43.478 0.00 0.00 44.53 3.58
5623 5913 4.133078 CAGAGGAAGCCCTGAATATTGTC 58.867 47.826 0.00 0.00 44.53 3.18
5624 5914 3.117738 CCAGAGGAAGCCCTGAATATTGT 60.118 47.826 0.00 0.00 44.53 2.71
5625 5915 3.137176 TCCAGAGGAAGCCCTGAATATTG 59.863 47.826 0.00 0.00 44.53 1.90
5626 5916 3.397527 TCCAGAGGAAGCCCTGAATATT 58.602 45.455 0.00 0.00 44.53 1.28
5627 5917 3.066208 TCCAGAGGAAGCCCTGAATAT 57.934 47.619 0.00 0.00 44.53 1.28
5628 5918 2.568546 TCCAGAGGAAGCCCTGAATA 57.431 50.000 0.00 0.00 44.53 1.75
5629 5919 1.904440 ATCCAGAGGAAGCCCTGAAT 58.096 50.000 0.00 0.00 44.53 2.57
5630 5920 1.283029 CAATCCAGAGGAAGCCCTGAA 59.717 52.381 0.00 0.00 44.53 3.02
5631 5921 0.914644 CAATCCAGAGGAAGCCCTGA 59.085 55.000 0.00 0.00 44.53 3.86
5632 5922 0.750911 GCAATCCAGAGGAAGCCCTG 60.751 60.000 0.00 0.00 44.53 4.45
5634 5924 0.750911 CTGCAATCCAGAGGAAGCCC 60.751 60.000 10.15 0.00 44.64 5.19
5635 5925 0.034670 ACTGCAATCCAGAGGAAGCC 60.035 55.000 10.15 0.00 44.64 4.35
5636 5926 1.377536 GACTGCAATCCAGAGGAAGC 58.622 55.000 6.84 6.84 44.64 3.86
5637 5927 1.741732 CGGACTGCAATCCAGAGGAAG 60.742 57.143 15.61 0.00 44.64 3.46
5638 5928 0.250234 CGGACTGCAATCCAGAGGAA 59.750 55.000 15.61 0.00 44.64 3.36
5639 5929 1.617018 CCGGACTGCAATCCAGAGGA 61.617 60.000 15.61 0.00 44.64 3.71
5640 5930 1.153289 CCGGACTGCAATCCAGAGG 60.153 63.158 15.61 3.44 44.64 3.69
5641 5931 1.817099 GCCGGACTGCAATCCAGAG 60.817 63.158 15.61 3.20 44.64 3.35
5642 5932 2.268920 GCCGGACTGCAATCCAGA 59.731 61.111 15.61 0.00 44.64 3.86
5644 5934 2.905996 AAGGCCGGACTGCAATCCA 61.906 57.895 12.91 0.00 38.87 3.41
5645 5935 2.044946 AAGGCCGGACTGCAATCC 60.045 61.111 12.91 3.48 35.16 3.01
5646 5936 3.056313 GCAAGGCCGGACTGCAATC 62.056 63.158 12.91 0.00 0.00 2.67
5647 5937 3.064324 GCAAGGCCGGACTGCAAT 61.064 61.111 12.91 0.00 0.00 3.56
5648 5938 4.577677 TGCAAGGCCGGACTGCAA 62.578 61.111 25.98 13.42 32.17 4.08
5649 5939 4.577677 TTGCAAGGCCGGACTGCA 62.578 61.111 24.87 24.87 0.00 4.41
5650 5940 4.043200 GTTGCAAGGCCGGACTGC 62.043 66.667 12.91 18.22 0.00 4.40
5651 5941 2.463589 TAGGTTGCAAGGCCGGACTG 62.464 60.000 12.91 6.46 0.00 3.51
5652 5942 1.562672 ATAGGTTGCAAGGCCGGACT 61.563 55.000 2.12 2.12 0.00 3.85
5653 5943 1.077716 ATAGGTTGCAAGGCCGGAC 60.078 57.895 5.05 0.00 0.00 4.79
5654 5944 1.223487 GATAGGTTGCAAGGCCGGA 59.777 57.895 5.05 0.00 0.00 5.14
5655 5945 0.679640 TTGATAGGTTGCAAGGCCGG 60.680 55.000 0.00 0.00 0.00 6.13
5656 5946 1.133025 CTTTGATAGGTTGCAAGGCCG 59.867 52.381 0.00 0.00 0.00 6.13
5657 5947 2.171003 ACTTTGATAGGTTGCAAGGCC 58.829 47.619 0.00 0.00 0.00 5.19
5658 5948 3.578688 CAACTTTGATAGGTTGCAAGGC 58.421 45.455 0.00 0.00 36.78 4.35
5659 5949 3.614870 GCCAACTTTGATAGGTTGCAAGG 60.615 47.826 0.00 0.00 40.75 3.61
5660 5950 3.578688 GCCAACTTTGATAGGTTGCAAG 58.421 45.455 0.00 0.00 40.75 4.01
5661 5951 2.298729 GGCCAACTTTGATAGGTTGCAA 59.701 45.455 0.00 0.00 40.75 4.08
5662 5952 1.892474 GGCCAACTTTGATAGGTTGCA 59.108 47.619 0.00 0.00 40.75 4.08
5663 5953 1.892474 TGGCCAACTTTGATAGGTTGC 59.108 47.619 0.61 0.00 40.75 4.17
5664 5954 3.763360 TCATGGCCAACTTTGATAGGTTG 59.237 43.478 10.96 0.00 41.46 3.77
5665 5955 4.046286 TCATGGCCAACTTTGATAGGTT 57.954 40.909 10.96 0.00 0.00 3.50
5666 5956 3.737559 TCATGGCCAACTTTGATAGGT 57.262 42.857 10.96 0.00 0.00 3.08
5667 5957 5.353938 CATTTCATGGCCAACTTTGATAGG 58.646 41.667 10.96 1.79 0.00 2.57
5668 5958 5.353938 CCATTTCATGGCCAACTTTGATAG 58.646 41.667 10.96 1.90 44.70 2.08
5669 5959 5.341872 CCATTTCATGGCCAACTTTGATA 57.658 39.130 10.96 4.39 44.70 2.15
5670 5960 4.210724 CCATTTCATGGCCAACTTTGAT 57.789 40.909 10.96 0.00 44.70 2.57
5671 5961 3.681593 CCATTTCATGGCCAACTTTGA 57.318 42.857 10.96 5.98 44.70 2.69
5682 5972 5.106197 TGTTAACAGTGCTAGCCATTTCATG 60.106 40.000 13.29 3.07 0.00 3.07
5683 5973 5.009631 TGTTAACAGTGCTAGCCATTTCAT 58.990 37.500 13.29 0.00 0.00 2.57
5684 5974 4.215399 GTGTTAACAGTGCTAGCCATTTCA 59.785 41.667 13.29 0.00 0.00 2.69
5685 5975 4.455877 AGTGTTAACAGTGCTAGCCATTTC 59.544 41.667 15.17 0.00 0.00 2.17
5686 5976 4.398319 AGTGTTAACAGTGCTAGCCATTT 58.602 39.130 15.17 2.80 0.00 2.32
5687 5977 4.021102 AGTGTTAACAGTGCTAGCCATT 57.979 40.909 15.17 3.76 0.00 3.16
5688 5978 3.703001 AGTGTTAACAGTGCTAGCCAT 57.297 42.857 15.17 0.00 0.00 4.40
5689 5979 3.613193 CGTAGTGTTAACAGTGCTAGCCA 60.613 47.826 23.41 1.28 31.00 4.75
5690 5980 2.921754 CGTAGTGTTAACAGTGCTAGCC 59.078 50.000 23.41 3.49 31.00 3.93
5691 5981 3.607209 GTCGTAGTGTTAACAGTGCTAGC 59.393 47.826 23.41 8.10 31.00 3.42
5692 5982 3.844657 CGTCGTAGTGTTAACAGTGCTAG 59.155 47.826 23.41 11.85 31.00 3.42
5693 5983 3.498018 TCGTCGTAGTGTTAACAGTGCTA 59.502 43.478 23.41 12.95 31.00 3.49
5694 5984 2.291465 TCGTCGTAGTGTTAACAGTGCT 59.709 45.455 23.41 13.17 31.00 4.40
5695 5985 2.653890 TCGTCGTAGTGTTAACAGTGC 58.346 47.619 23.41 20.87 0.00 4.40
5696 5986 4.678287 ACATTCGTCGTAGTGTTAACAGTG 59.322 41.667 23.41 9.82 0.00 3.66
5697 5987 4.678287 CACATTCGTCGTAGTGTTAACAGT 59.322 41.667 19.44 19.44 0.00 3.55
5698 5988 4.913345 TCACATTCGTCGTAGTGTTAACAG 59.087 41.667 8.98 0.00 33.84 3.16
5699 5989 4.857799 TCACATTCGTCGTAGTGTTAACA 58.142 39.130 3.59 3.59 33.84 2.41
5700 5990 4.913924 ACTCACATTCGTCGTAGTGTTAAC 59.086 41.667 0.00 0.00 33.84 2.01
5701 5991 5.112220 ACTCACATTCGTCGTAGTGTTAA 57.888 39.130 11.85 0.00 33.84 2.01
5702 5992 4.754372 ACTCACATTCGTCGTAGTGTTA 57.246 40.909 11.85 0.24 33.84 2.41
5703 5993 3.637998 ACTCACATTCGTCGTAGTGTT 57.362 42.857 11.85 2.15 33.84 3.32
5704 5994 4.023792 TGTTACTCACATTCGTCGTAGTGT 60.024 41.667 11.85 4.83 33.84 3.55
5705 5995 4.320164 GTGTTACTCACATTCGTCGTAGTG 59.680 45.833 7.72 7.72 45.51 2.74
5706 5996 4.470462 GTGTTACTCACATTCGTCGTAGT 58.530 43.478 0.00 0.00 45.51 2.73
5718 6008 5.118203 GGAACGTGATACTTGTGTTACTCAC 59.882 44.000 0.00 0.00 46.31 3.51
5719 6009 5.224888 GGAACGTGATACTTGTGTTACTCA 58.775 41.667 0.00 0.00 0.00 3.41
5720 6010 4.624452 GGGAACGTGATACTTGTGTTACTC 59.376 45.833 0.00 0.00 0.00 2.59
5721 6011 4.562143 GGGGAACGTGATACTTGTGTTACT 60.562 45.833 0.00 0.00 0.00 2.24
5722 6012 3.681417 GGGGAACGTGATACTTGTGTTAC 59.319 47.826 0.00 0.00 0.00 2.50
5723 6013 3.324268 TGGGGAACGTGATACTTGTGTTA 59.676 43.478 0.00 0.00 0.00 2.41
5724 6014 2.105134 TGGGGAACGTGATACTTGTGTT 59.895 45.455 0.00 0.00 0.00 3.32
5725 6015 1.695242 TGGGGAACGTGATACTTGTGT 59.305 47.619 0.00 0.00 0.00 3.72
5726 6016 2.465860 TGGGGAACGTGATACTTGTG 57.534 50.000 0.00 0.00 0.00 3.33
5727 6017 3.773119 AGTATGGGGAACGTGATACTTGT 59.227 43.478 0.00 0.00 29.15 3.16
5728 6018 4.402056 AGTATGGGGAACGTGATACTTG 57.598 45.455 0.00 0.00 29.15 3.16
5729 6019 6.742559 ATTAGTATGGGGAACGTGATACTT 57.257 37.500 0.00 0.00 34.30 2.24
5730 6020 6.742559 AATTAGTATGGGGAACGTGATACT 57.257 37.500 0.00 0.00 36.04 2.12
5731 6021 7.496591 TCAAAATTAGTATGGGGAACGTGATAC 59.503 37.037 0.00 0.00 0.00 2.24
5732 6022 7.566569 TCAAAATTAGTATGGGGAACGTGATA 58.433 34.615 0.00 0.00 0.00 2.15
5733 6023 6.419791 TCAAAATTAGTATGGGGAACGTGAT 58.580 36.000 0.00 0.00 0.00 3.06
5734 6024 5.806818 TCAAAATTAGTATGGGGAACGTGA 58.193 37.500 0.00 0.00 0.00 4.35
5735 6025 6.542370 AGATCAAAATTAGTATGGGGAACGTG 59.458 38.462 0.00 0.00 0.00 4.49
5736 6026 6.659824 AGATCAAAATTAGTATGGGGAACGT 58.340 36.000 0.00 0.00 0.00 3.99
5737 6027 6.992715 AGAGATCAAAATTAGTATGGGGAACG 59.007 38.462 0.00 0.00 0.00 3.95
5738 6028 8.214364 AGAGAGATCAAAATTAGTATGGGGAAC 58.786 37.037 0.00 0.00 0.00 3.62
5739 6029 8.337118 AGAGAGATCAAAATTAGTATGGGGAA 57.663 34.615 0.00 0.00 0.00 3.97
5740 6030 7.937700 AGAGAGATCAAAATTAGTATGGGGA 57.062 36.000 0.00 0.00 0.00 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.