Multiple sequence alignment - TraesCS3B01G380100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G380100 chr3B 100.000 3953 0 0 1 3953 597765054 597769006 0.000000e+00 7300
1 TraesCS3B01G380100 chr3B 97.633 338 8 0 3616 3953 597777841 597778178 7.360000e-162 580
2 TraesCS3B01G380100 chr3B 96.471 340 10 2 3615 3952 595862491 595862830 9.590000e-156 560
3 TraesCS3B01G380100 chr3B 96.439 337 12 0 3617 3953 708193145 708192809 1.240000e-154 556
4 TraesCS3B01G380100 chr3B 90.625 192 15 3 2779 2968 607525520 607525710 6.560000e-63 252
5 TraesCS3B01G380100 chr3B 90.244 123 12 0 2667 2789 607499816 607499938 1.140000e-35 161
6 TraesCS3B01G380100 chr3D 96.087 3169 97 14 454 3615 454890584 454893732 0.000000e+00 5140
7 TraesCS3B01G380100 chr3A 95.160 3182 111 19 454 3615 597162075 597165233 0.000000e+00 4983
8 TraesCS3B01G380100 chr3A 92.079 202 13 1 267 468 597161859 597162057 8.360000e-72 281
9 TraesCS3B01G380100 chr1D 81.869 1969 324 29 995 2941 392553365 392555322 0.000000e+00 1628
10 TraesCS3B01G380100 chr1A 81.421 1970 331 30 995 2941 492809429 492807472 0.000000e+00 1578
11 TraesCS3B01G380100 chr1B 81.374 1965 338 25 995 2941 530063209 530061255 0.000000e+00 1576
12 TraesCS3B01G380100 chrUn 96.755 339 11 0 3615 3953 297075186 297074848 2.060000e-157 566
13 TraesCS3B01G380100 chr4B 96.765 340 9 2 3615 3953 151642372 151642034 2.060000e-157 566
14 TraesCS3B01G380100 chr4B 96.221 344 12 1 3611 3953 321952784 321953127 2.670000e-156 562
15 TraesCS3B01G380100 chr4B 96.188 341 12 1 3614 3953 151614972 151614632 1.240000e-154 556
16 TraesCS3B01G380100 chr2B 96.460 339 12 0 3615 3953 683801656 683801994 9.590000e-156 560
17 TraesCS3B01G380100 chr2B 95.882 340 14 0 3614 3953 683811420 683811759 5.770000e-153 551


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G380100 chr3B 597765054 597769006 3952 False 7300 7300 100.0000 1 3953 1 chr3B.!!$F2 3952
1 TraesCS3B01G380100 chr3D 454890584 454893732 3148 False 5140 5140 96.0870 454 3615 1 chr3D.!!$F1 3161
2 TraesCS3B01G380100 chr3A 597161859 597165233 3374 False 2632 4983 93.6195 267 3615 2 chr3A.!!$F1 3348
3 TraesCS3B01G380100 chr1D 392553365 392555322 1957 False 1628 1628 81.8690 995 2941 1 chr1D.!!$F1 1946
4 TraesCS3B01G380100 chr1A 492807472 492809429 1957 True 1578 1578 81.4210 995 2941 1 chr1A.!!$R1 1946
5 TraesCS3B01G380100 chr1B 530061255 530063209 1954 True 1576 1576 81.3740 995 2941 1 chr1B.!!$R1 1946

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
855 894 0.036952 CCCAGTTCACGAGCTGTCAT 60.037 55.000 9.62 0.0 37.87 3.06 F
882 921 1.069765 ACAGAACACCACCGCTCTG 59.930 57.895 0.00 0.0 40.92 3.35 F
2322 2394 1.340658 CATGTGGTTCGAGACAGACG 58.659 55.000 0.00 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2301 2373 0.037326 TCTGTCTCGAACCACATGCC 60.037 55.000 0.00 0.0 0.00 4.40 R
2347 2419 2.594303 CACGCCAAGAGCACCCAA 60.594 61.111 0.00 0.0 44.04 4.12 R
3860 3949 0.101219 GACGGAATGCTTGGATTGCC 59.899 55.000 1.44 0.0 0.00 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.319249 TCAACGCGTGACAGACTG 57.681 55.556 14.98 5.32 0.00 3.51
21 22 1.299850 TCAACGCGTGACAGACTGG 60.300 57.895 14.98 0.00 0.00 4.00
22 23 2.029073 AACGCGTGACAGACTGGG 59.971 61.111 14.98 0.00 0.00 4.45
23 24 4.664677 ACGCGTGACAGACTGGGC 62.665 66.667 12.93 3.92 0.00 5.36
24 25 4.662961 CGCGTGACAGACTGGGCA 62.663 66.667 7.51 1.70 0.00 5.36
25 26 2.740055 GCGTGACAGACTGGGCAG 60.740 66.667 7.51 0.00 0.00 4.85
26 27 3.051210 CGTGACAGACTGGGCAGA 58.949 61.111 7.51 0.00 0.00 4.26
27 28 1.367471 CGTGACAGACTGGGCAGAA 59.633 57.895 7.51 0.00 0.00 3.02
28 29 0.946221 CGTGACAGACTGGGCAGAAC 60.946 60.000 7.51 0.00 0.00 3.01
29 30 0.106708 GTGACAGACTGGGCAGAACA 59.893 55.000 7.51 0.00 0.00 3.18
30 31 0.106708 TGACAGACTGGGCAGAACAC 59.893 55.000 7.51 0.00 0.00 3.32
31 32 0.394565 GACAGACTGGGCAGAACACT 59.605 55.000 7.51 0.00 0.00 3.55
32 33 0.394565 ACAGACTGGGCAGAACACTC 59.605 55.000 7.51 0.00 0.00 3.51
33 34 0.394192 CAGACTGGGCAGAACACTCA 59.606 55.000 0.00 0.00 0.00 3.41
34 35 0.394565 AGACTGGGCAGAACACTCAC 59.605 55.000 0.00 0.00 0.00 3.51
35 36 0.394565 GACTGGGCAGAACACTCACT 59.605 55.000 0.00 0.00 0.00 3.41
36 37 1.618837 GACTGGGCAGAACACTCACTA 59.381 52.381 0.00 0.00 0.00 2.74
37 38 2.234908 GACTGGGCAGAACACTCACTAT 59.765 50.000 0.00 0.00 0.00 2.12
38 39 3.441101 ACTGGGCAGAACACTCACTATA 58.559 45.455 0.00 0.00 0.00 1.31
39 40 3.838317 ACTGGGCAGAACACTCACTATAA 59.162 43.478 0.00 0.00 0.00 0.98
40 41 4.286032 ACTGGGCAGAACACTCACTATAAA 59.714 41.667 0.00 0.00 0.00 1.40
41 42 4.832248 TGGGCAGAACACTCACTATAAAG 58.168 43.478 0.00 0.00 0.00 1.85
42 43 4.286032 TGGGCAGAACACTCACTATAAAGT 59.714 41.667 0.00 0.00 35.91 2.66
43 44 4.870991 GGGCAGAACACTCACTATAAAGTC 59.129 45.833 0.00 0.00 31.97 3.01
44 45 4.870991 GGCAGAACACTCACTATAAAGTCC 59.129 45.833 0.00 0.00 31.97 3.85
45 46 5.337652 GGCAGAACACTCACTATAAAGTCCT 60.338 44.000 0.00 0.00 31.97 3.85
46 47 6.127423 GGCAGAACACTCACTATAAAGTCCTA 60.127 42.308 0.00 0.00 31.97 2.94
47 48 7.418025 GGCAGAACACTCACTATAAAGTCCTAT 60.418 40.741 0.00 0.00 31.97 2.57
48 49 8.630917 GCAGAACACTCACTATAAAGTCCTATA 58.369 37.037 0.00 0.00 31.97 1.31
65 66 9.533831 AAGTCCTATATTTGAAACAAATGGTCT 57.466 29.630 16.61 10.85 0.00 3.85
66 67 9.533831 AGTCCTATATTTGAAACAAATGGTCTT 57.466 29.630 16.61 0.00 0.00 3.01
126 127 8.677148 TTATTTTAGTCCTTCCTATGATGTGC 57.323 34.615 0.00 0.00 0.00 4.57
127 128 2.898729 AGTCCTTCCTATGATGTGCG 57.101 50.000 0.00 0.00 0.00 5.34
128 129 2.111384 AGTCCTTCCTATGATGTGCGT 58.889 47.619 0.00 0.00 0.00 5.24
129 130 2.501723 AGTCCTTCCTATGATGTGCGTT 59.498 45.455 0.00 0.00 0.00 4.84
130 131 2.866762 GTCCTTCCTATGATGTGCGTTC 59.133 50.000 0.00 0.00 0.00 3.95
131 132 2.499693 TCCTTCCTATGATGTGCGTTCA 59.500 45.455 0.00 0.00 0.00 3.18
132 133 2.868583 CCTTCCTATGATGTGCGTTCAG 59.131 50.000 0.00 0.00 0.00 3.02
144 145 3.894257 CGTTCAGCAAGAGGAGACA 57.106 52.632 0.00 0.00 0.00 3.41
145 146 2.376808 CGTTCAGCAAGAGGAGACAT 57.623 50.000 0.00 0.00 0.00 3.06
146 147 2.693069 CGTTCAGCAAGAGGAGACATT 58.307 47.619 0.00 0.00 0.00 2.71
147 148 3.070018 CGTTCAGCAAGAGGAGACATTT 58.930 45.455 0.00 0.00 0.00 2.32
148 149 3.499918 CGTTCAGCAAGAGGAGACATTTT 59.500 43.478 0.00 0.00 0.00 1.82
149 150 4.377841 CGTTCAGCAAGAGGAGACATTTTC 60.378 45.833 0.00 0.00 0.00 2.29
150 151 4.356405 TCAGCAAGAGGAGACATTTTCA 57.644 40.909 0.00 0.00 0.00 2.69
151 152 4.914983 TCAGCAAGAGGAGACATTTTCAT 58.085 39.130 0.00 0.00 0.00 2.57
152 153 5.319453 TCAGCAAGAGGAGACATTTTCATT 58.681 37.500 0.00 0.00 0.00 2.57
153 154 6.475504 TCAGCAAGAGGAGACATTTTCATTA 58.524 36.000 0.00 0.00 0.00 1.90
154 155 6.942005 TCAGCAAGAGGAGACATTTTCATTAA 59.058 34.615 0.00 0.00 0.00 1.40
155 156 7.025963 CAGCAAGAGGAGACATTTTCATTAAC 58.974 38.462 0.00 0.00 0.00 2.01
156 157 6.944862 AGCAAGAGGAGACATTTTCATTAACT 59.055 34.615 0.00 0.00 0.00 2.24
157 158 7.120432 AGCAAGAGGAGACATTTTCATTAACTC 59.880 37.037 0.00 0.00 0.00 3.01
158 159 7.094634 GCAAGAGGAGACATTTTCATTAACTCA 60.095 37.037 0.00 0.00 0.00 3.41
159 160 8.449397 CAAGAGGAGACATTTTCATTAACTCAG 58.551 37.037 0.00 0.00 0.00 3.35
160 161 7.108847 AGAGGAGACATTTTCATTAACTCAGG 58.891 38.462 0.00 0.00 0.00 3.86
161 162 7.020827 AGGAGACATTTTCATTAACTCAGGA 57.979 36.000 0.00 0.00 0.00 3.86
162 163 7.461749 AGGAGACATTTTCATTAACTCAGGAA 58.538 34.615 0.00 0.00 0.00 3.36
163 164 7.944554 AGGAGACATTTTCATTAACTCAGGAAA 59.055 33.333 0.00 0.00 0.00 3.13
164 165 8.576442 GGAGACATTTTCATTAACTCAGGAAAA 58.424 33.333 0.00 0.00 41.70 2.29
171 172 9.883142 TTTTCATTAACTCAGGAAAATGTTTGT 57.117 25.926 0.00 0.00 35.13 2.83
172 173 8.870160 TTCATTAACTCAGGAAAATGTTTGTG 57.130 30.769 0.00 0.00 32.43 3.33
173 174 8.231692 TCATTAACTCAGGAAAATGTTTGTGA 57.768 30.769 0.00 0.00 32.43 3.58
174 175 8.134895 TCATTAACTCAGGAAAATGTTTGTGAC 58.865 33.333 0.00 0.00 32.43 3.67
175 176 5.913137 AACTCAGGAAAATGTTTGTGACA 57.087 34.783 0.00 0.00 43.71 3.58
176 177 5.913137 ACTCAGGAAAATGTTTGTGACAA 57.087 34.783 0.00 0.00 42.62 3.18
177 178 6.469782 ACTCAGGAAAATGTTTGTGACAAT 57.530 33.333 0.00 0.00 42.62 2.71
178 179 6.877236 ACTCAGGAAAATGTTTGTGACAATT 58.123 32.000 0.00 0.00 42.62 2.32
179 180 7.330262 ACTCAGGAAAATGTTTGTGACAATTT 58.670 30.769 0.00 0.00 42.53 1.82
188 189 9.550406 AAATGTTTGTGACAATTTCATCAATCT 57.450 25.926 0.00 0.00 42.62 2.40
189 190 9.550406 AATGTTTGTGACAATTTCATCAATCTT 57.450 25.926 0.00 0.00 42.62 2.40
203 204 9.681692 TTTCATCAATCTTAAGATGTTGTGTTG 57.318 29.630 18.61 16.04 41.74 3.33
204 205 7.819644 TCATCAATCTTAAGATGTTGTGTTGG 58.180 34.615 18.61 7.49 41.74 3.77
205 206 6.012658 TCAATCTTAAGATGTTGTGTTGGC 57.987 37.500 18.61 0.00 34.49 4.52
206 207 5.534278 TCAATCTTAAGATGTTGTGTTGGCA 59.466 36.000 18.61 0.00 34.49 4.92
207 208 4.829064 TCTTAAGATGTTGTGTTGGCAC 57.171 40.909 0.00 0.00 45.44 5.01
208 209 4.826733 ATCTTAAGATGTTGTGTTGGCACA 59.173 37.500 17.26 0.00 42.36 4.57
209 210 6.183360 AATCTTAAGATGTTGTGTTGGCACAA 60.183 34.615 18.61 8.83 46.45 3.33
229 230 7.177498 CACAATATTTTAGCGTGCTCATAGA 57.823 36.000 0.00 0.00 0.00 1.98
230 231 7.286508 CACAATATTTTAGCGTGCTCATAGAG 58.713 38.462 0.00 0.00 0.00 2.43
231 232 7.169813 CACAATATTTTAGCGTGCTCATAGAGA 59.830 37.037 0.00 0.00 0.00 3.10
233 234 4.720649 TTTTAGCGTGCTCATAGAGAGT 57.279 40.909 0.00 0.00 46.47 3.24
234 235 3.699779 TTAGCGTGCTCATAGAGAGTG 57.300 47.619 0.00 0.00 46.47 3.51
235 236 1.468985 AGCGTGCTCATAGAGAGTGT 58.531 50.000 0.00 0.00 46.47 3.55
236 237 1.133982 AGCGTGCTCATAGAGAGTGTG 59.866 52.381 0.00 0.00 46.47 3.82
237 238 1.554392 CGTGCTCATAGAGAGTGTGC 58.446 55.000 0.00 0.00 46.47 4.57
238 239 1.554392 GTGCTCATAGAGAGTGTGCG 58.446 55.000 0.00 0.00 46.47 5.34
239 240 1.135257 GTGCTCATAGAGAGTGTGCGT 60.135 52.381 0.00 0.00 46.47 5.24
240 241 2.097629 GTGCTCATAGAGAGTGTGCGTA 59.902 50.000 0.00 0.00 46.47 4.42
241 242 2.097629 TGCTCATAGAGAGTGTGCGTAC 59.902 50.000 0.00 0.00 46.47 3.67
242 243 2.851386 GCTCATAGAGAGTGTGCGTACG 60.851 54.545 11.84 11.84 46.47 3.67
243 244 1.669265 TCATAGAGAGTGTGCGTACGG 59.331 52.381 18.39 0.00 0.00 4.02
244 245 1.669265 CATAGAGAGTGTGCGTACGGA 59.331 52.381 18.39 12.34 0.00 4.69
245 246 1.081892 TAGAGAGTGTGCGTACGGAC 58.918 55.000 30.07 30.07 36.97 4.79
256 257 2.042104 CGTACGGACGTTCAAAGAGT 57.958 50.000 13.28 0.00 44.31 3.24
257 258 2.388121 CGTACGGACGTTCAAAGAGTT 58.612 47.619 13.28 0.00 44.31 3.01
258 259 3.554524 CGTACGGACGTTCAAAGAGTTA 58.445 45.455 13.28 0.00 44.31 2.24
259 260 3.974401 CGTACGGACGTTCAAAGAGTTAA 59.026 43.478 13.28 0.00 44.31 2.01
260 261 4.087648 CGTACGGACGTTCAAAGAGTTAAG 59.912 45.833 13.28 0.00 44.31 1.85
261 262 4.050852 ACGGACGTTCAAAGAGTTAAGT 57.949 40.909 0.00 0.00 0.00 2.24
262 263 5.186996 ACGGACGTTCAAAGAGTTAAGTA 57.813 39.130 0.00 0.00 0.00 2.24
263 264 4.978580 ACGGACGTTCAAAGAGTTAAGTAC 59.021 41.667 0.00 0.00 0.00 2.73
264 265 4.977963 CGGACGTTCAAAGAGTTAAGTACA 59.022 41.667 0.00 0.00 0.00 2.90
265 266 5.632347 CGGACGTTCAAAGAGTTAAGTACAT 59.368 40.000 0.00 0.00 0.00 2.29
272 273 5.404366 TCAAAGAGTTAAGTACATGTGCGTC 59.596 40.000 9.11 2.27 0.00 5.19
281 282 5.011090 AGTACATGTGCGTCTATGTGAAT 57.989 39.130 9.11 0.00 37.98 2.57
300 301 5.905733 GTGAATATGTGATCATCTGCGTTTG 59.094 40.000 0.00 0.00 35.70 2.93
304 305 3.402110 TGTGATCATCTGCGTTTGTTCT 58.598 40.909 0.00 0.00 0.00 3.01
305 306 4.565022 TGTGATCATCTGCGTTTGTTCTA 58.435 39.130 0.00 0.00 0.00 2.10
397 398 2.023673 CCTGCATTCGATTTGGGCTAA 58.976 47.619 0.00 0.00 0.00 3.09
431 432 0.675633 CACAACCTGGGCTTTTCCTG 59.324 55.000 0.00 0.00 34.39 3.86
449 450 4.451150 CCTACGCAGCAGCCCGAA 62.451 66.667 9.80 0.00 37.52 4.30
471 504 1.686052 CCAAGTTAAGCAGCCAACCAA 59.314 47.619 4.26 0.00 0.00 3.67
472 505 2.299867 CCAAGTTAAGCAGCCAACCAAT 59.700 45.455 4.26 0.00 0.00 3.16
600 636 3.311110 TCCCCACCAGTCAGCGAC 61.311 66.667 0.00 1.15 0.00 5.19
605 641 1.238439 CCACCAGTCAGCGACAATTT 58.762 50.000 10.52 0.00 34.60 1.82
711 748 3.057104 CCCGAGGTCACCAAATTTTTACC 60.057 47.826 0.00 0.00 0.00 2.85
725 762 2.110757 TTTACCCGACCGTTCACCCC 62.111 60.000 0.00 0.00 0.00 4.95
731 768 4.675029 ACCGTTCACCCCGCGAAG 62.675 66.667 8.23 0.00 0.00 3.79
761 798 3.656045 CCACCGCCCACAACGAAC 61.656 66.667 0.00 0.00 0.00 3.95
790 827 3.845398 TCCTCTCCCCACGGTAATTTTTA 59.155 43.478 0.00 0.00 0.00 1.52
795 832 3.825585 TCCCCACGGTAATTTTTAACCAC 59.174 43.478 0.00 0.00 35.35 4.16
796 833 3.573110 CCCCACGGTAATTTTTAACCACA 59.427 43.478 0.00 0.00 35.35 4.17
797 834 4.548494 CCCACGGTAATTTTTAACCACAC 58.452 43.478 0.00 0.00 35.35 3.82
798 835 4.220572 CCACGGTAATTTTTAACCACACG 58.779 43.478 0.00 0.00 35.35 4.49
799 836 4.261114 CCACGGTAATTTTTAACCACACGT 60.261 41.667 0.00 0.00 35.35 4.49
800 837 4.905295 CACGGTAATTTTTAACCACACGTC 59.095 41.667 0.00 0.00 35.35 4.34
801 838 4.574013 ACGGTAATTTTTAACCACACGTCA 59.426 37.500 0.00 0.00 35.35 4.35
854 893 1.367471 CCCAGTTCACGAGCTGTCA 59.633 57.895 9.62 0.00 37.87 3.58
855 894 0.036952 CCCAGTTCACGAGCTGTCAT 60.037 55.000 9.62 0.00 37.87 3.06
882 921 1.069765 ACAGAACACCACCGCTCTG 59.930 57.895 0.00 0.00 40.92 3.35
1056 1095 3.044059 GCAGCACATCGCCAAGACC 62.044 63.158 0.00 0.00 44.04 3.85
1179 1245 2.328589 TGGAGGAGGAGGAGGAGGG 61.329 68.421 0.00 0.00 0.00 4.30
1587 1656 1.760268 GCGACGACGAGGACTACGAT 61.760 60.000 12.29 0.00 42.66 3.73
1602 1674 2.335369 GATGCGGACGACGGCTAT 59.665 61.111 17.02 9.65 44.51 2.97
2106 2178 1.743321 GCGATCTCCTCCCTGACCTG 61.743 65.000 0.00 0.00 0.00 4.00
2301 2373 2.120232 GTCATGAACTATCTCCGTGCG 58.880 52.381 0.00 0.00 0.00 5.34
2322 2394 1.340658 CATGTGGTTCGAGACAGACG 58.659 55.000 0.00 0.00 0.00 4.18
2565 2637 0.769247 AGCTTGGGGTTTTACTCGGT 59.231 50.000 0.00 0.00 0.00 4.69
2772 2844 0.541998 AGTCCGAGTGGGTGATCACA 60.542 55.000 26.47 4.98 39.93 3.58
3024 3097 8.895737 TCGTATCATCACTAATGTACTGTTGTA 58.104 33.333 0.00 0.00 36.68 2.41
3110 3194 7.054124 CCATGAGGTTAGGCTTTATGTTAGAA 58.946 38.462 0.00 0.00 0.00 2.10
3135 3219 3.425359 GCACATCATTGTCTTCTCCAACG 60.425 47.826 0.00 0.00 32.34 4.10
3144 3228 4.312443 TGTCTTCTCCAACGGTGTAAATC 58.688 43.478 0.00 0.00 0.00 2.17
3264 3348 4.124851 TGAAGGAGGAACGCTTATCTTC 57.875 45.455 0.00 0.00 0.00 2.87
3267 3351 3.100671 AGGAGGAACGCTTATCTTCAGT 58.899 45.455 0.00 0.00 0.00 3.41
3338 3422 5.949354 TGACCCAACTTTTATGATGGTTAGG 59.051 40.000 0.00 0.00 0.00 2.69
3340 3424 4.709397 CCCAACTTTTATGATGGTTAGGCA 59.291 41.667 0.00 0.00 0.00 4.75
3392 3478 6.211584 GCATGAGTTAATCTGGTCCCTATCTA 59.788 42.308 0.00 0.00 0.00 1.98
3608 3697 4.348461 TGTAAAGCCATATGGGATAACGGA 59.652 41.667 23.30 0.00 40.01 4.69
3615 3704 5.423015 CCATATGGGATAACGGATCTTCTG 58.577 45.833 14.52 0.00 40.01 3.02
3616 3705 5.046304 CCATATGGGATAACGGATCTTCTGT 60.046 44.000 14.52 0.00 40.01 3.41
3617 3706 3.819564 TGGGATAACGGATCTTCTGTG 57.180 47.619 0.00 0.00 35.86 3.66
3618 3707 3.371034 TGGGATAACGGATCTTCTGTGA 58.629 45.455 0.00 0.00 35.86 3.58
3619 3708 3.132289 TGGGATAACGGATCTTCTGTGAC 59.868 47.826 0.00 0.00 35.86 3.67
3620 3709 3.132289 GGGATAACGGATCTTCTGTGACA 59.868 47.826 0.00 0.00 35.86 3.58
3621 3710 4.113354 GGATAACGGATCTTCTGTGACAC 58.887 47.826 0.00 0.00 35.86 3.67
3622 3711 4.142138 GGATAACGGATCTTCTGTGACACT 60.142 45.833 7.20 0.00 35.86 3.55
3623 3712 3.305398 AACGGATCTTCTGTGACACTC 57.695 47.619 7.20 0.00 35.86 3.51
3624 3713 1.546476 ACGGATCTTCTGTGACACTCC 59.454 52.381 7.20 3.30 34.08 3.85
3625 3714 1.546029 CGGATCTTCTGTGACACTCCA 59.454 52.381 7.20 0.00 0.00 3.86
3626 3715 2.029020 CGGATCTTCTGTGACACTCCAA 60.029 50.000 7.20 0.00 0.00 3.53
3627 3716 3.554960 CGGATCTTCTGTGACACTCCAAA 60.555 47.826 7.20 0.00 0.00 3.28
3628 3717 4.389374 GGATCTTCTGTGACACTCCAAAA 58.611 43.478 7.20 0.00 0.00 2.44
3629 3718 4.821805 GGATCTTCTGTGACACTCCAAAAA 59.178 41.667 7.20 0.00 0.00 1.94
3630 3719 5.474876 GGATCTTCTGTGACACTCCAAAAAT 59.525 40.000 7.20 0.00 0.00 1.82
3631 3720 6.015940 GGATCTTCTGTGACACTCCAAAAATT 60.016 38.462 7.20 0.00 0.00 1.82
3632 3721 6.773976 TCTTCTGTGACACTCCAAAAATTT 57.226 33.333 7.20 0.00 0.00 1.82
3633 3722 7.169158 TCTTCTGTGACACTCCAAAAATTTT 57.831 32.000 7.20 0.00 0.00 1.82
3634 3723 7.035004 TCTTCTGTGACACTCCAAAAATTTTG 58.965 34.615 11.24 11.24 0.00 2.44
3635 3724 6.279513 TCTGTGACACTCCAAAAATTTTGT 57.720 33.333 16.15 0.00 0.00 2.83
3636 3725 6.696411 TCTGTGACACTCCAAAAATTTTGTT 58.304 32.000 16.15 0.00 0.00 2.83
3637 3726 6.589523 TCTGTGACACTCCAAAAATTTTGTTG 59.410 34.615 16.15 12.23 0.00 3.33
3638 3727 6.226787 TGTGACACTCCAAAAATTTTGTTGT 58.773 32.000 16.15 14.81 0.00 3.32
3639 3728 6.708054 TGTGACACTCCAAAAATTTTGTTGTT 59.292 30.769 16.15 6.59 0.00 2.83
3640 3729 7.227512 TGTGACACTCCAAAAATTTTGTTGTTT 59.772 29.630 16.15 8.14 0.00 2.83
3641 3730 8.073167 GTGACACTCCAAAAATTTTGTTGTTTT 58.927 29.630 16.15 5.18 0.00 2.43
3642 3731 8.624776 TGACACTCCAAAAATTTTGTTGTTTTT 58.375 25.926 16.15 0.00 37.85 1.94
3643 3732 8.794308 ACACTCCAAAAATTTTGTTGTTTTTG 57.206 26.923 16.15 13.48 46.80 2.44
3644 3733 8.409371 ACACTCCAAAAATTTTGTTGTTTTTGT 58.591 25.926 16.15 7.26 46.27 2.83
3645 3734 9.242477 CACTCCAAAAATTTTGTTGTTTTTGTT 57.758 25.926 16.15 4.21 46.27 2.83
3646 3735 9.809096 ACTCCAAAAATTTTGTTGTTTTTGTTT 57.191 22.222 16.15 3.95 46.27 2.83
3648 3737 8.542953 TCCAAAAATTTTGTTGTTTTTGTTTGC 58.457 25.926 16.15 0.00 46.27 3.68
3649 3738 8.330302 CCAAAAATTTTGTTGTTTTTGTTTGCA 58.670 25.926 16.15 0.00 46.27 4.08
3650 3739 9.354544 CAAAAATTTTGTTGTTTTTGTTTGCAG 57.645 25.926 10.10 0.00 44.33 4.41
3651 3740 6.687653 AATTTTGTTGTTTTTGTTTGCAGC 57.312 29.167 0.00 0.00 0.00 5.25
3652 3741 4.818534 TTTGTTGTTTTTGTTTGCAGCA 57.181 31.818 0.00 0.00 0.00 4.41
3653 3742 4.818534 TTGTTGTTTTTGTTTGCAGCAA 57.181 31.818 2.83 2.83 31.53 3.91
3654 3743 4.818534 TGTTGTTTTTGTTTGCAGCAAA 57.181 31.818 16.93 16.93 34.47 3.68
3655 3744 5.173774 TGTTGTTTTTGTTTGCAGCAAAA 57.826 30.435 22.26 20.19 42.03 2.44
3656 3745 5.210715 TGTTGTTTTTGTTTGCAGCAAAAG 58.789 33.333 22.26 0.00 43.70 2.27
3657 3746 3.819537 TGTTTTTGTTTGCAGCAAAAGC 58.180 36.364 22.26 24.39 43.70 3.51
3658 3747 3.170505 GTTTTTGTTTGCAGCAAAAGCC 58.829 40.909 22.26 10.76 43.70 4.35
3659 3748 2.399916 TTTGTTTGCAGCAAAAGCCT 57.600 40.000 22.26 0.00 35.03 4.58
3660 3749 2.399916 TTGTTTGCAGCAAAAGCCTT 57.600 40.000 22.26 0.00 35.03 4.35
3661 3750 1.654317 TGTTTGCAGCAAAAGCCTTG 58.346 45.000 22.26 0.00 35.03 3.61
3662 3751 0.305617 GTTTGCAGCAAAAGCCTTGC 59.694 50.000 22.26 12.14 45.22 4.01
3674 3763 2.071778 AGCCTTGCTTGGTTTGAAGA 57.928 45.000 0.00 0.00 33.89 2.87
3675 3764 2.387757 AGCCTTGCTTGGTTTGAAGAA 58.612 42.857 0.00 0.00 33.89 2.52
3676 3765 2.363359 AGCCTTGCTTGGTTTGAAGAAG 59.637 45.455 0.00 0.00 33.89 2.85
3677 3766 2.546584 GCCTTGCTTGGTTTGAAGAAGG 60.547 50.000 0.00 0.00 35.50 3.46
3678 3767 2.695147 CCTTGCTTGGTTTGAAGAAGGT 59.305 45.455 0.00 0.00 31.89 3.50
3679 3768 3.243535 CCTTGCTTGGTTTGAAGAAGGTC 60.244 47.826 0.00 0.00 31.89 3.85
3680 3769 3.011566 TGCTTGGTTTGAAGAAGGTCA 57.988 42.857 0.00 0.00 0.00 4.02
3681 3770 3.565307 TGCTTGGTTTGAAGAAGGTCAT 58.435 40.909 0.00 0.00 0.00 3.06
3682 3771 3.960102 TGCTTGGTTTGAAGAAGGTCATT 59.040 39.130 0.00 0.00 0.00 2.57
3683 3772 4.405358 TGCTTGGTTTGAAGAAGGTCATTT 59.595 37.500 0.00 0.00 0.00 2.32
3684 3773 5.596361 TGCTTGGTTTGAAGAAGGTCATTTA 59.404 36.000 0.00 0.00 0.00 1.40
3685 3774 6.097554 TGCTTGGTTTGAAGAAGGTCATTTAA 59.902 34.615 0.00 0.00 0.00 1.52
3686 3775 6.983890 GCTTGGTTTGAAGAAGGTCATTTAAA 59.016 34.615 0.00 0.00 0.00 1.52
3687 3776 7.042725 GCTTGGTTTGAAGAAGGTCATTTAAAC 60.043 37.037 0.00 0.00 35.38 2.01
3688 3777 6.811954 TGGTTTGAAGAAGGTCATTTAAACC 58.188 36.000 14.11 14.11 46.90 3.27
3689 3778 6.183360 TGGTTTGAAGAAGGTCATTTAAACCC 60.183 38.462 16.78 0.00 46.52 4.11
3690 3779 6.041637 GGTTTGAAGAAGGTCATTTAAACCCT 59.958 38.462 11.28 0.00 43.74 4.34
3691 3780 7.418597 GGTTTGAAGAAGGTCATTTAAACCCTT 60.419 37.037 12.93 12.93 43.74 3.95
3700 3789 9.826574 AAGGTCATTTAAACCCTTCTTAAAAAC 57.173 29.630 8.95 0.00 37.52 2.43
3701 3790 8.426489 AGGTCATTTAAACCCTTCTTAAAAACC 58.574 33.333 11.37 11.37 37.80 3.27
3702 3791 8.426489 GGTCATTTAAACCCTTCTTAAAAACCT 58.574 33.333 0.00 0.00 36.45 3.50
3703 3792 9.472361 GTCATTTAAACCCTTCTTAAAAACCTC 57.528 33.333 0.00 0.00 33.26 3.85
3704 3793 9.429109 TCATTTAAACCCTTCTTAAAAACCTCT 57.571 29.630 0.00 0.00 33.26 3.69
3705 3794 9.692749 CATTTAAACCCTTCTTAAAAACCTCTC 57.307 33.333 0.00 0.00 33.26 3.20
3706 3795 9.656323 ATTTAAACCCTTCTTAAAAACCTCTCT 57.344 29.630 0.00 0.00 33.26 3.10
3707 3796 9.483489 TTTAAACCCTTCTTAAAAACCTCTCTT 57.517 29.630 0.00 0.00 0.00 2.85
3708 3797 7.973048 AAACCCTTCTTAAAAACCTCTCTTT 57.027 32.000 0.00 0.00 0.00 2.52
3709 3798 7.973048 AACCCTTCTTAAAAACCTCTCTTTT 57.027 32.000 0.00 0.00 0.00 2.27
3710 3799 7.348080 ACCCTTCTTAAAAACCTCTCTTTTG 57.652 36.000 0.00 0.00 0.00 2.44
3711 3800 7.123383 ACCCTTCTTAAAAACCTCTCTTTTGA 58.877 34.615 0.00 0.00 0.00 2.69
3713 3802 7.285629 CCCTTCTTAAAAACCTCTCTTTTGAGT 59.714 37.037 0.00 0.00 46.30 3.41
3714 3803 8.687242 CCTTCTTAAAAACCTCTCTTTTGAGTT 58.313 33.333 0.00 0.00 46.30 3.01
3721 3810 9.856488 AAAAACCTCTCTTTTGAGTTTTACTTC 57.144 29.630 0.00 0.00 46.30 3.01
3722 3811 8.809468 AAACCTCTCTTTTGAGTTTTACTTCT 57.191 30.769 0.00 0.00 46.30 2.85
3723 3812 8.439993 AACCTCTCTTTTGAGTTTTACTTCTC 57.560 34.615 0.00 0.00 46.30 2.87
3724 3813 7.565680 ACCTCTCTTTTGAGTTTTACTTCTCA 58.434 34.615 0.00 0.00 46.30 3.27
3725 3814 8.047310 ACCTCTCTTTTGAGTTTTACTTCTCAA 58.953 33.333 3.91 3.91 46.30 3.02
3734 3823 8.856490 TGAGTTTTACTTCTCAAAAGCATTTC 57.144 30.769 0.00 0.00 37.28 2.17
3735 3824 8.686334 TGAGTTTTACTTCTCAAAAGCATTTCT 58.314 29.630 0.00 0.00 37.28 2.52
3736 3825 9.521503 GAGTTTTACTTCTCAAAAGCATTTCTT 57.478 29.630 0.00 0.00 37.28 2.52
3737 3826 9.305925 AGTTTTACTTCTCAAAAGCATTTCTTG 57.694 29.630 0.00 0.00 37.28 3.02
3738 3827 8.542953 GTTTTACTTCTCAAAAGCATTTCTTGG 58.457 33.333 0.00 0.00 37.28 3.61
3739 3828 7.581213 TTACTTCTCAAAAGCATTTCTTGGA 57.419 32.000 0.00 0.00 37.28 3.53
3740 3829 6.661304 ACTTCTCAAAAGCATTTCTTGGAT 57.339 33.333 0.00 0.00 37.28 3.41
3741 3830 7.059202 ACTTCTCAAAAGCATTTCTTGGATT 57.941 32.000 0.00 0.00 37.28 3.01
3742 3831 7.503549 ACTTCTCAAAAGCATTTCTTGGATTT 58.496 30.769 0.00 0.00 37.28 2.17
3743 3832 8.641541 ACTTCTCAAAAGCATTTCTTGGATTTA 58.358 29.630 0.00 0.00 37.28 1.40
3744 3833 9.480053 CTTCTCAAAAGCATTTCTTGGATTTAA 57.520 29.630 0.00 0.00 37.28 1.52
3781 3870 3.904800 CCTTTTTGGTTCTGGGTTGTT 57.095 42.857 0.00 0.00 0.00 2.83
3782 3871 3.792401 CCTTTTTGGTTCTGGGTTGTTC 58.208 45.455 0.00 0.00 0.00 3.18
3783 3872 3.450817 CCTTTTTGGTTCTGGGTTGTTCT 59.549 43.478 0.00 0.00 0.00 3.01
3784 3873 4.081142 CCTTTTTGGTTCTGGGTTGTTCTT 60.081 41.667 0.00 0.00 0.00 2.52
3785 3874 5.487433 CTTTTTGGTTCTGGGTTGTTCTTT 58.513 37.500 0.00 0.00 0.00 2.52
3786 3875 4.464069 TTTGGTTCTGGGTTGTTCTTTG 57.536 40.909 0.00 0.00 0.00 2.77
3787 3876 2.383855 TGGTTCTGGGTTGTTCTTTGG 58.616 47.619 0.00 0.00 0.00 3.28
3788 3877 2.291930 TGGTTCTGGGTTGTTCTTTGGT 60.292 45.455 0.00 0.00 0.00 3.67
3789 3878 2.764010 GGTTCTGGGTTGTTCTTTGGTT 59.236 45.455 0.00 0.00 0.00 3.67
3790 3879 3.196901 GGTTCTGGGTTGTTCTTTGGTTT 59.803 43.478 0.00 0.00 0.00 3.27
3791 3880 4.323180 GGTTCTGGGTTGTTCTTTGGTTTT 60.323 41.667 0.00 0.00 0.00 2.43
3792 3881 4.464069 TCTGGGTTGTTCTTTGGTTTTG 57.536 40.909 0.00 0.00 0.00 2.44
3793 3882 4.090090 TCTGGGTTGTTCTTTGGTTTTGA 58.910 39.130 0.00 0.00 0.00 2.69
3794 3883 4.714308 TCTGGGTTGTTCTTTGGTTTTGAT 59.286 37.500 0.00 0.00 0.00 2.57
3795 3884 5.017294 TGGGTTGTTCTTTGGTTTTGATC 57.983 39.130 0.00 0.00 0.00 2.92
3796 3885 4.141824 TGGGTTGTTCTTTGGTTTTGATCC 60.142 41.667 0.00 0.00 0.00 3.36
3797 3886 4.141824 GGGTTGTTCTTTGGTTTTGATCCA 60.142 41.667 0.00 0.00 0.00 3.41
3798 3887 5.454613 GGGTTGTTCTTTGGTTTTGATCCAT 60.455 40.000 0.00 0.00 34.75 3.41
3799 3888 6.054941 GGTTGTTCTTTGGTTTTGATCCATT 58.945 36.000 0.00 0.00 34.75 3.16
3800 3889 6.202762 GGTTGTTCTTTGGTTTTGATCCATTC 59.797 38.462 0.00 0.00 34.75 2.67
3801 3890 6.729690 TGTTCTTTGGTTTTGATCCATTCT 57.270 33.333 0.00 0.00 34.75 2.40
3802 3891 7.123355 TGTTCTTTGGTTTTGATCCATTCTT 57.877 32.000 0.00 0.00 34.75 2.52
3803 3892 6.985645 TGTTCTTTGGTTTTGATCCATTCTTG 59.014 34.615 0.00 0.00 34.75 3.02
3804 3893 6.729690 TCTTTGGTTTTGATCCATTCTTGT 57.270 33.333 0.00 0.00 34.75 3.16
3805 3894 7.123355 TCTTTGGTTTTGATCCATTCTTGTT 57.877 32.000 0.00 0.00 34.75 2.83
3806 3895 7.563906 TCTTTGGTTTTGATCCATTCTTGTTT 58.436 30.769 0.00 0.00 34.75 2.83
3807 3896 8.046107 TCTTTGGTTTTGATCCATTCTTGTTTT 58.954 29.630 0.00 0.00 34.75 2.43
3808 3897 8.572855 TTTGGTTTTGATCCATTCTTGTTTTT 57.427 26.923 0.00 0.00 34.75 1.94
3809 3898 9.672673 TTTGGTTTTGATCCATTCTTGTTTTTA 57.327 25.926 0.00 0.00 34.75 1.52
3810 3899 8.655651 TGGTTTTGATCCATTCTTGTTTTTAC 57.344 30.769 0.00 0.00 0.00 2.01
3811 3900 7.713073 TGGTTTTGATCCATTCTTGTTTTTACC 59.287 33.333 0.00 0.00 0.00 2.85
3812 3901 7.713073 GGTTTTGATCCATTCTTGTTTTTACCA 59.287 33.333 0.00 0.00 0.00 3.25
3813 3902 9.271828 GTTTTGATCCATTCTTGTTTTTACCAT 57.728 29.630 0.00 0.00 0.00 3.55
3814 3903 8.830201 TTTGATCCATTCTTGTTTTTACCATG 57.170 30.769 0.00 0.00 0.00 3.66
3815 3904 6.397272 TGATCCATTCTTGTTTTTACCATGC 58.603 36.000 0.00 0.00 0.00 4.06
3816 3905 5.146010 TCCATTCTTGTTTTTACCATGCC 57.854 39.130 0.00 0.00 0.00 4.40
3817 3906 4.837860 TCCATTCTTGTTTTTACCATGCCT 59.162 37.500 0.00 0.00 0.00 4.75
3818 3907 5.047377 TCCATTCTTGTTTTTACCATGCCTC 60.047 40.000 0.00 0.00 0.00 4.70
3819 3908 5.047092 CCATTCTTGTTTTTACCATGCCTCT 60.047 40.000 0.00 0.00 0.00 3.69
3820 3909 6.458210 CATTCTTGTTTTTACCATGCCTCTT 58.542 36.000 0.00 0.00 0.00 2.85
3821 3910 5.452078 TCTTGTTTTTACCATGCCTCTTG 57.548 39.130 0.00 0.00 0.00 3.02
3822 3911 4.892934 TCTTGTTTTTACCATGCCTCTTGT 59.107 37.500 0.00 0.00 0.00 3.16
3823 3912 4.582701 TGTTTTTACCATGCCTCTTGTG 57.417 40.909 0.00 0.00 0.00 3.33
3824 3913 3.320541 TGTTTTTACCATGCCTCTTGTGG 59.679 43.478 0.00 0.00 38.96 4.17
3826 3915 4.374689 TTTTACCATGCCTCTTGTGGTA 57.625 40.909 0.00 0.00 44.08 3.25
3828 3917 2.969821 ACCATGCCTCTTGTGGTAAA 57.030 45.000 0.00 0.00 44.08 2.01
3829 3918 3.237268 ACCATGCCTCTTGTGGTAAAA 57.763 42.857 0.00 0.00 44.08 1.52
3830 3919 3.778265 ACCATGCCTCTTGTGGTAAAAT 58.222 40.909 0.00 0.00 44.08 1.82
3831 3920 4.159557 ACCATGCCTCTTGTGGTAAAATT 58.840 39.130 0.00 0.00 44.08 1.82
3832 3921 4.220602 ACCATGCCTCTTGTGGTAAAATTC 59.779 41.667 0.00 0.00 44.08 2.17
3833 3922 4.463891 CCATGCCTCTTGTGGTAAAATTCT 59.536 41.667 0.00 0.00 0.00 2.40
3834 3923 5.393461 CCATGCCTCTTGTGGTAAAATTCTC 60.393 44.000 0.00 0.00 0.00 2.87
3835 3924 4.079253 TGCCTCTTGTGGTAAAATTCTCC 58.921 43.478 0.00 0.00 0.00 3.71
3836 3925 3.444034 GCCTCTTGTGGTAAAATTCTCCC 59.556 47.826 0.00 0.00 0.00 4.30
3837 3926 4.662278 CCTCTTGTGGTAAAATTCTCCCA 58.338 43.478 0.00 0.00 0.00 4.37
3838 3927 5.076873 CCTCTTGTGGTAAAATTCTCCCAA 58.923 41.667 0.00 0.00 0.00 4.12
3839 3928 5.538433 CCTCTTGTGGTAAAATTCTCCCAAA 59.462 40.000 0.00 0.00 0.00 3.28
3840 3929 6.041523 CCTCTTGTGGTAAAATTCTCCCAAAA 59.958 38.462 0.00 0.00 0.00 2.44
3841 3930 7.418483 CCTCTTGTGGTAAAATTCTCCCAAAAA 60.418 37.037 0.00 0.00 0.00 1.94
3842 3931 8.028652 TCTTGTGGTAAAATTCTCCCAAAAAT 57.971 30.769 0.00 0.00 0.00 1.82
3843 3932 8.147704 TCTTGTGGTAAAATTCTCCCAAAAATC 58.852 33.333 0.00 0.00 0.00 2.17
3844 3933 6.764379 TGTGGTAAAATTCTCCCAAAAATCC 58.236 36.000 0.00 0.00 0.00 3.01
3845 3934 6.170506 GTGGTAAAATTCTCCCAAAAATCCC 58.829 40.000 0.00 0.00 0.00 3.85
3846 3935 6.013725 GTGGTAAAATTCTCCCAAAAATCCCT 60.014 38.462 0.00 0.00 0.00 4.20
3847 3936 6.212589 TGGTAAAATTCTCCCAAAAATCCCTC 59.787 38.462 0.00 0.00 0.00 4.30
3848 3937 5.762179 AAAATTCTCCCAAAAATCCCTCC 57.238 39.130 0.00 0.00 0.00 4.30
3849 3938 4.699566 AATTCTCCCAAAAATCCCTCCT 57.300 40.909 0.00 0.00 0.00 3.69
3850 3939 4.699566 ATTCTCCCAAAAATCCCTCCTT 57.300 40.909 0.00 0.00 0.00 3.36
3851 3940 3.739401 TCTCCCAAAAATCCCTCCTTC 57.261 47.619 0.00 0.00 0.00 3.46
3852 3941 2.311841 TCTCCCAAAAATCCCTCCTTCC 59.688 50.000 0.00 0.00 0.00 3.46
3853 3942 2.042979 CTCCCAAAAATCCCTCCTTCCA 59.957 50.000 0.00 0.00 0.00 3.53
3854 3943 2.179427 CCCAAAAATCCCTCCTTCCAC 58.821 52.381 0.00 0.00 0.00 4.02
3855 3944 2.225369 CCCAAAAATCCCTCCTTCCACT 60.225 50.000 0.00 0.00 0.00 4.00
3856 3945 3.510459 CCAAAAATCCCTCCTTCCACTT 58.490 45.455 0.00 0.00 0.00 3.16
3857 3946 3.903714 CCAAAAATCCCTCCTTCCACTTT 59.096 43.478 0.00 0.00 0.00 2.66
3858 3947 5.083821 CCAAAAATCCCTCCTTCCACTTTA 58.916 41.667 0.00 0.00 0.00 1.85
3859 3948 5.185828 CCAAAAATCCCTCCTTCCACTTTAG 59.814 44.000 0.00 0.00 0.00 1.85
3860 3949 4.592997 AAATCCCTCCTTCCACTTTAGG 57.407 45.455 0.00 0.00 0.00 2.69
3862 3951 0.256177 CCCTCCTTCCACTTTAGGGC 59.744 60.000 0.00 0.00 40.51 5.19
3863 3952 0.991920 CCTCCTTCCACTTTAGGGCA 59.008 55.000 0.00 0.00 32.20 5.36
3864 3953 1.354368 CCTCCTTCCACTTTAGGGCAA 59.646 52.381 0.00 0.00 32.20 4.52
3865 3954 2.024941 CCTCCTTCCACTTTAGGGCAAT 60.025 50.000 0.00 0.00 32.20 3.56
3866 3955 3.282885 CTCCTTCCACTTTAGGGCAATC 58.717 50.000 0.00 0.00 32.20 2.67
3867 3956 2.025321 TCCTTCCACTTTAGGGCAATCC 60.025 50.000 0.00 0.00 32.20 3.01
3868 3957 2.291540 CCTTCCACTTTAGGGCAATCCA 60.292 50.000 0.00 0.00 38.24 3.41
3869 3958 3.430453 CTTCCACTTTAGGGCAATCCAA 58.570 45.455 0.00 0.00 38.24 3.53
3870 3959 3.085952 TCCACTTTAGGGCAATCCAAG 57.914 47.619 0.00 0.00 38.24 3.61
3871 3960 1.478105 CCACTTTAGGGCAATCCAAGC 59.522 52.381 0.00 0.00 38.24 4.01
3872 3961 2.170166 CACTTTAGGGCAATCCAAGCA 58.830 47.619 0.00 0.00 38.24 3.91
3873 3962 2.762327 CACTTTAGGGCAATCCAAGCAT 59.238 45.455 0.00 0.00 38.24 3.79
3874 3963 3.196254 CACTTTAGGGCAATCCAAGCATT 59.804 43.478 0.00 0.00 38.24 3.56
3875 3964 3.448660 ACTTTAGGGCAATCCAAGCATTC 59.551 43.478 0.00 0.00 38.24 2.67
3876 3965 2.071778 TAGGGCAATCCAAGCATTCC 57.928 50.000 0.00 0.00 38.24 3.01
3877 3966 1.039233 AGGGCAATCCAAGCATTCCG 61.039 55.000 0.00 0.00 38.24 4.30
3878 3967 1.322538 GGGCAATCCAAGCATTCCGT 61.323 55.000 0.00 0.00 35.00 4.69
3879 3968 0.101219 GGCAATCCAAGCATTCCGTC 59.899 55.000 0.00 0.00 0.00 4.79
3880 3969 0.101219 GCAATCCAAGCATTCCGTCC 59.899 55.000 0.00 0.00 0.00 4.79
3881 3970 0.740737 CAATCCAAGCATTCCGTCCC 59.259 55.000 0.00 0.00 0.00 4.46
3882 3971 0.331278 AATCCAAGCATTCCGTCCCA 59.669 50.000 0.00 0.00 0.00 4.37
3883 3972 0.331278 ATCCAAGCATTCCGTCCCAA 59.669 50.000 0.00 0.00 0.00 4.12
3884 3973 0.608035 TCCAAGCATTCCGTCCCAAC 60.608 55.000 0.00 0.00 0.00 3.77
3885 3974 0.893270 CCAAGCATTCCGTCCCAACA 60.893 55.000 0.00 0.00 0.00 3.33
3886 3975 0.958091 CAAGCATTCCGTCCCAACAA 59.042 50.000 0.00 0.00 0.00 2.83
3887 3976 1.068333 CAAGCATTCCGTCCCAACAAG 60.068 52.381 0.00 0.00 0.00 3.16
3888 3977 0.110486 AGCATTCCGTCCCAACAAGT 59.890 50.000 0.00 0.00 0.00 3.16
3889 3978 0.521735 GCATTCCGTCCCAACAAGTC 59.478 55.000 0.00 0.00 0.00 3.01
3890 3979 1.890876 CATTCCGTCCCAACAAGTCA 58.109 50.000 0.00 0.00 0.00 3.41
3891 3980 2.226330 CATTCCGTCCCAACAAGTCAA 58.774 47.619 0.00 0.00 0.00 3.18
3892 3981 2.421751 TTCCGTCCCAACAAGTCAAA 57.578 45.000 0.00 0.00 0.00 2.69
3893 3982 2.649531 TCCGTCCCAACAAGTCAAAT 57.350 45.000 0.00 0.00 0.00 2.32
3894 3983 2.500229 TCCGTCCCAACAAGTCAAATC 58.500 47.619 0.00 0.00 0.00 2.17
3895 3984 1.539827 CCGTCCCAACAAGTCAAATCC 59.460 52.381 0.00 0.00 0.00 3.01
3896 3985 2.226330 CGTCCCAACAAGTCAAATCCA 58.774 47.619 0.00 0.00 0.00 3.41
3897 3986 2.819608 CGTCCCAACAAGTCAAATCCAT 59.180 45.455 0.00 0.00 0.00 3.41
3898 3987 3.255642 CGTCCCAACAAGTCAAATCCATT 59.744 43.478 0.00 0.00 0.00 3.16
3899 3988 4.261994 CGTCCCAACAAGTCAAATCCATTT 60.262 41.667 0.00 0.00 0.00 2.32
3900 3989 5.610398 GTCCCAACAAGTCAAATCCATTTT 58.390 37.500 0.00 0.00 0.00 1.82
3901 3990 6.054941 GTCCCAACAAGTCAAATCCATTTTT 58.945 36.000 0.00 0.00 0.00 1.94
3902 3991 6.018016 GTCCCAACAAGTCAAATCCATTTTTG 60.018 38.462 0.00 0.00 37.83 2.44
3903 3992 5.239087 CCCAACAAGTCAAATCCATTTTTGG 59.761 40.000 4.78 4.78 37.23 3.28
3904 3993 6.054295 CCAACAAGTCAAATCCATTTTTGGA 58.946 36.000 0.00 0.00 42.91 3.53
3919 4008 9.859152 TCCATTTTTGGATTTTTATCCTTTTGT 57.141 25.926 5.82 0.00 41.29 2.83
3942 4031 7.962917 TGTTTTTCTTCTCAAAACAATTCTGC 58.037 30.769 8.19 0.00 46.29 4.26
3943 4032 7.064490 TGTTTTTCTTCTCAAAACAATTCTGCC 59.936 33.333 8.19 0.00 46.29 4.85
3944 4033 5.850557 TTCTTCTCAAAACAATTCTGCCA 57.149 34.783 0.00 0.00 0.00 4.92
3945 4034 6.409524 TTCTTCTCAAAACAATTCTGCCAT 57.590 33.333 0.00 0.00 0.00 4.40
3946 4035 6.409524 TCTTCTCAAAACAATTCTGCCATT 57.590 33.333 0.00 0.00 0.00 3.16
3947 4036 7.523293 TCTTCTCAAAACAATTCTGCCATTA 57.477 32.000 0.00 0.00 0.00 1.90
3948 4037 8.125978 TCTTCTCAAAACAATTCTGCCATTAT 57.874 30.769 0.00 0.00 0.00 1.28
3949 4038 8.587608 TCTTCTCAAAACAATTCTGCCATTATT 58.412 29.630 0.00 0.00 0.00 1.40
3950 4039 9.211485 CTTCTCAAAACAATTCTGCCATTATTT 57.789 29.630 0.00 0.00 0.00 1.40
3951 4040 8.761575 TCTCAAAACAATTCTGCCATTATTTC 57.238 30.769 0.00 0.00 0.00 2.17
3952 4041 8.587608 TCTCAAAACAATTCTGCCATTATTTCT 58.412 29.630 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.299850 CCAGTCTGTCACGCGTTGA 60.300 57.895 10.22 8.30 0.00 3.18
4 5 2.310233 CCCAGTCTGTCACGCGTTG 61.310 63.158 10.22 2.83 0.00 4.10
5 6 2.029073 CCCAGTCTGTCACGCGTT 59.971 61.111 10.22 0.00 0.00 4.84
6 7 4.664677 GCCCAGTCTGTCACGCGT 62.665 66.667 5.58 5.58 0.00 6.01
7 8 4.662961 TGCCCAGTCTGTCACGCG 62.663 66.667 3.53 3.53 0.00 6.01
8 9 2.715532 TTCTGCCCAGTCTGTCACGC 62.716 60.000 0.00 0.00 0.00 5.34
9 10 0.946221 GTTCTGCCCAGTCTGTCACG 60.946 60.000 0.00 0.00 0.00 4.35
10 11 0.106708 TGTTCTGCCCAGTCTGTCAC 59.893 55.000 0.00 0.00 0.00 3.67
11 12 0.106708 GTGTTCTGCCCAGTCTGTCA 59.893 55.000 0.00 0.00 0.00 3.58
12 13 0.394565 AGTGTTCTGCCCAGTCTGTC 59.605 55.000 0.00 0.00 0.00 3.51
13 14 0.394565 GAGTGTTCTGCCCAGTCTGT 59.605 55.000 0.00 0.00 31.05 3.41
14 15 0.394192 TGAGTGTTCTGCCCAGTCTG 59.606 55.000 0.00 0.00 34.14 3.51
15 16 0.394565 GTGAGTGTTCTGCCCAGTCT 59.605 55.000 0.00 0.00 34.14 3.24
16 17 0.394565 AGTGAGTGTTCTGCCCAGTC 59.605 55.000 0.00 0.00 33.71 3.51
17 18 1.717032 TAGTGAGTGTTCTGCCCAGT 58.283 50.000 0.00 0.00 0.00 4.00
18 19 4.471904 TTATAGTGAGTGTTCTGCCCAG 57.528 45.455 0.00 0.00 0.00 4.45
19 20 4.286032 ACTTTATAGTGAGTGTTCTGCCCA 59.714 41.667 0.00 0.00 31.99 5.36
20 21 4.833390 ACTTTATAGTGAGTGTTCTGCCC 58.167 43.478 0.00 0.00 31.99 5.36
21 22 4.870991 GGACTTTATAGTGAGTGTTCTGCC 59.129 45.833 0.00 0.00 33.84 4.85
22 23 5.725362 AGGACTTTATAGTGAGTGTTCTGC 58.275 41.667 0.00 0.00 33.84 4.26
39 40 9.533831 AGACCATTTGTTTCAAATATAGGACTT 57.466 29.630 13.28 0.00 0.00 3.01
40 41 9.533831 AAGACCATTTGTTTCAAATATAGGACT 57.466 29.630 13.28 10.63 0.00 3.85
100 101 9.120538 GCACATCATAGGAAGGACTAAAATAAA 57.879 33.333 0.00 0.00 0.00 1.40
101 102 7.441157 CGCACATCATAGGAAGGACTAAAATAA 59.559 37.037 0.00 0.00 0.00 1.40
102 103 6.929049 CGCACATCATAGGAAGGACTAAAATA 59.071 38.462 0.00 0.00 0.00 1.40
103 104 5.760253 CGCACATCATAGGAAGGACTAAAAT 59.240 40.000 0.00 0.00 0.00 1.82
104 105 5.116180 CGCACATCATAGGAAGGACTAAAA 58.884 41.667 0.00 0.00 0.00 1.52
105 106 4.161565 ACGCACATCATAGGAAGGACTAAA 59.838 41.667 0.00 0.00 0.00 1.85
106 107 3.704566 ACGCACATCATAGGAAGGACTAA 59.295 43.478 0.00 0.00 0.00 2.24
107 108 3.296854 ACGCACATCATAGGAAGGACTA 58.703 45.455 0.00 0.00 0.00 2.59
108 109 2.111384 ACGCACATCATAGGAAGGACT 58.889 47.619 0.00 0.00 0.00 3.85
109 110 2.604046 ACGCACATCATAGGAAGGAC 57.396 50.000 0.00 0.00 0.00 3.85
110 111 2.499693 TGAACGCACATCATAGGAAGGA 59.500 45.455 0.00 0.00 0.00 3.36
111 112 2.868583 CTGAACGCACATCATAGGAAGG 59.131 50.000 0.00 0.00 0.00 3.46
112 113 2.286294 GCTGAACGCACATCATAGGAAG 59.714 50.000 0.00 0.00 38.92 3.46
113 114 2.279741 GCTGAACGCACATCATAGGAA 58.720 47.619 0.00 0.00 38.92 3.36
114 115 1.206849 TGCTGAACGCACATCATAGGA 59.793 47.619 0.00 0.00 45.47 2.94
115 116 1.655484 TGCTGAACGCACATCATAGG 58.345 50.000 0.00 0.00 45.47 2.57
125 126 0.319900 TGTCTCCTCTTGCTGAACGC 60.320 55.000 0.00 0.00 39.77 4.84
126 127 2.376808 ATGTCTCCTCTTGCTGAACG 57.623 50.000 0.00 0.00 0.00 3.95
127 128 4.516698 TGAAAATGTCTCCTCTTGCTGAAC 59.483 41.667 0.00 0.00 0.00 3.18
128 129 4.717877 TGAAAATGTCTCCTCTTGCTGAA 58.282 39.130 0.00 0.00 0.00 3.02
129 130 4.356405 TGAAAATGTCTCCTCTTGCTGA 57.644 40.909 0.00 0.00 0.00 4.26
130 131 5.640189 AATGAAAATGTCTCCTCTTGCTG 57.360 39.130 0.00 0.00 0.00 4.41
131 132 6.944862 AGTTAATGAAAATGTCTCCTCTTGCT 59.055 34.615 0.00 0.00 0.00 3.91
132 133 7.094634 TGAGTTAATGAAAATGTCTCCTCTTGC 60.095 37.037 0.00 0.00 0.00 4.01
133 134 8.327941 TGAGTTAATGAAAATGTCTCCTCTTG 57.672 34.615 0.00 0.00 0.00 3.02
134 135 7.609532 CCTGAGTTAATGAAAATGTCTCCTCTT 59.390 37.037 0.00 0.00 0.00 2.85
135 136 7.038017 TCCTGAGTTAATGAAAATGTCTCCTCT 60.038 37.037 0.00 0.00 0.00 3.69
136 137 7.106239 TCCTGAGTTAATGAAAATGTCTCCTC 58.894 38.462 0.00 0.00 0.00 3.71
137 138 7.020827 TCCTGAGTTAATGAAAATGTCTCCT 57.979 36.000 0.00 0.00 0.00 3.69
138 139 7.687941 TTCCTGAGTTAATGAAAATGTCTCC 57.312 36.000 0.00 0.00 0.00 3.71
145 146 9.883142 ACAAACATTTTCCTGAGTTAATGAAAA 57.117 25.926 0.00 0.00 39.99 2.29
146 147 9.311916 CACAAACATTTTCCTGAGTTAATGAAA 57.688 29.630 0.00 0.00 33.39 2.69
147 148 8.690884 TCACAAACATTTTCCTGAGTTAATGAA 58.309 29.630 0.00 0.00 33.39 2.57
148 149 8.134895 GTCACAAACATTTTCCTGAGTTAATGA 58.865 33.333 0.00 0.00 33.39 2.57
149 150 7.920151 TGTCACAAACATTTTCCTGAGTTAATG 59.080 33.333 0.00 0.00 34.87 1.90
150 151 8.006298 TGTCACAAACATTTTCCTGAGTTAAT 57.994 30.769 0.00 0.00 31.20 1.40
151 152 7.397892 TGTCACAAACATTTTCCTGAGTTAA 57.602 32.000 0.00 0.00 31.20 2.01
152 153 7.397892 TTGTCACAAACATTTTCCTGAGTTA 57.602 32.000 0.00 0.00 37.82 2.24
153 154 5.913137 TGTCACAAACATTTTCCTGAGTT 57.087 34.783 0.00 0.00 31.20 3.01
154 155 5.913137 TTGTCACAAACATTTTCCTGAGT 57.087 34.783 0.00 0.00 37.82 3.41
155 156 7.775397 AAATTGTCACAAACATTTTCCTGAG 57.225 32.000 0.00 0.00 37.00 3.35
156 157 7.769272 GAAATTGTCACAAACATTTTCCTGA 57.231 32.000 0.00 0.00 44.71 3.86
162 163 9.550406 AGATTGATGAAATTGTCACAAACATTT 57.450 25.926 0.00 0.00 39.72 2.32
163 164 9.550406 AAGATTGATGAAATTGTCACAAACATT 57.450 25.926 0.00 0.00 39.72 2.71
177 178 9.681692 CAACACAACATCTTAAGATTGATGAAA 57.318 29.630 20.54 0.00 41.69 2.69
178 179 8.298854 CCAACACAACATCTTAAGATTGATGAA 58.701 33.333 20.54 0.00 41.69 2.57
179 180 7.575532 GCCAACACAACATCTTAAGATTGATGA 60.576 37.037 20.54 0.00 41.69 2.92
180 181 6.529125 GCCAACACAACATCTTAAGATTGATG 59.471 38.462 20.54 17.03 43.90 3.07
181 182 6.209192 TGCCAACACAACATCTTAAGATTGAT 59.791 34.615 20.54 8.32 31.21 2.57
182 183 5.534278 TGCCAACACAACATCTTAAGATTGA 59.466 36.000 20.54 0.00 31.21 2.57
183 184 5.630680 GTGCCAACACAACATCTTAAGATTG 59.369 40.000 15.49 14.93 46.61 2.67
184 185 5.772521 GTGCCAACACAACATCTTAAGATT 58.227 37.500 15.49 0.10 46.61 2.40
185 186 5.376854 GTGCCAACACAACATCTTAAGAT 57.623 39.130 12.37 12.37 46.61 2.40
186 187 4.829064 GTGCCAACACAACATCTTAAGA 57.171 40.909 7.82 7.82 46.61 2.10
199 200 4.480541 CACGCTAAAATATTGTGCCAACA 58.519 39.130 0.00 0.00 0.00 3.33
205 206 7.169813 TCTCTATGAGCACGCTAAAATATTGTG 59.830 37.037 0.00 0.00 0.00 3.33
206 207 7.210174 TCTCTATGAGCACGCTAAAATATTGT 58.790 34.615 0.00 0.00 0.00 2.71
207 208 7.383572 ACTCTCTATGAGCACGCTAAAATATTG 59.616 37.037 0.00 0.00 46.41 1.90
208 209 7.383572 CACTCTCTATGAGCACGCTAAAATATT 59.616 37.037 0.00 0.00 46.41 1.28
209 210 6.865726 CACTCTCTATGAGCACGCTAAAATAT 59.134 38.462 0.00 0.00 46.41 1.28
210 211 6.183360 ACACTCTCTATGAGCACGCTAAAATA 60.183 38.462 0.00 0.00 46.41 1.40
211 212 5.046529 CACTCTCTATGAGCACGCTAAAAT 58.953 41.667 0.00 0.00 46.41 1.82
212 213 4.082190 ACACTCTCTATGAGCACGCTAAAA 60.082 41.667 0.00 0.00 46.41 1.52
213 214 3.444034 ACACTCTCTATGAGCACGCTAAA 59.556 43.478 0.00 0.00 46.41 1.85
214 215 3.017442 ACACTCTCTATGAGCACGCTAA 58.983 45.455 0.00 0.00 46.41 3.09
215 216 2.356069 CACACTCTCTATGAGCACGCTA 59.644 50.000 0.00 0.00 46.41 4.26
216 217 1.133982 CACACTCTCTATGAGCACGCT 59.866 52.381 0.00 0.00 46.41 5.07
217 218 1.554392 CACACTCTCTATGAGCACGC 58.446 55.000 0.00 0.00 46.41 5.34
218 219 1.554392 GCACACTCTCTATGAGCACG 58.446 55.000 0.00 0.00 46.41 5.34
219 220 1.135257 ACGCACACTCTCTATGAGCAC 60.135 52.381 0.00 0.00 46.41 4.40
220 221 1.177401 ACGCACACTCTCTATGAGCA 58.823 50.000 0.00 0.00 46.41 4.26
221 222 2.722071 GTACGCACACTCTCTATGAGC 58.278 52.381 0.00 0.00 46.41 4.26
223 224 1.669265 CCGTACGCACACTCTCTATGA 59.331 52.381 10.49 0.00 0.00 2.15
224 225 1.669265 TCCGTACGCACACTCTCTATG 59.331 52.381 10.49 0.00 0.00 2.23
225 226 1.669779 GTCCGTACGCACACTCTCTAT 59.330 52.381 10.49 0.00 0.00 1.98
226 227 1.081892 GTCCGTACGCACACTCTCTA 58.918 55.000 10.49 0.00 0.00 2.43
227 228 1.874562 GTCCGTACGCACACTCTCT 59.125 57.895 10.49 0.00 0.00 3.10
228 229 1.511464 CGTCCGTACGCACACTCTC 60.511 63.158 10.41 0.00 43.12 3.20
229 230 2.559840 CGTCCGTACGCACACTCT 59.440 61.111 10.41 0.00 43.12 3.24
238 239 4.978580 ACTTAACTCTTTGAACGTCCGTAC 59.021 41.667 0.00 0.00 0.00 3.67
239 240 5.186996 ACTTAACTCTTTGAACGTCCGTA 57.813 39.130 0.00 0.00 0.00 4.02
240 241 4.050852 ACTTAACTCTTTGAACGTCCGT 57.949 40.909 0.00 0.00 0.00 4.69
241 242 4.977963 TGTACTTAACTCTTTGAACGTCCG 59.022 41.667 0.00 0.00 0.00 4.79
242 243 6.423001 ACATGTACTTAACTCTTTGAACGTCC 59.577 38.462 0.00 0.00 0.00 4.79
243 244 7.281484 CACATGTACTTAACTCTTTGAACGTC 58.719 38.462 0.00 0.00 0.00 4.34
244 245 6.292703 GCACATGTACTTAACTCTTTGAACGT 60.293 38.462 0.00 0.00 0.00 3.99
245 246 6.071463 GCACATGTACTTAACTCTTTGAACG 58.929 40.000 0.00 0.00 0.00 3.95
246 247 6.071463 CGCACATGTACTTAACTCTTTGAAC 58.929 40.000 0.00 0.00 0.00 3.18
247 248 5.756347 ACGCACATGTACTTAACTCTTTGAA 59.244 36.000 0.00 0.00 0.00 2.69
248 249 5.294356 ACGCACATGTACTTAACTCTTTGA 58.706 37.500 0.00 0.00 0.00 2.69
249 250 5.405571 AGACGCACATGTACTTAACTCTTTG 59.594 40.000 0.00 0.00 0.00 2.77
250 251 5.539048 AGACGCACATGTACTTAACTCTTT 58.461 37.500 0.00 0.00 0.00 2.52
251 252 5.135508 AGACGCACATGTACTTAACTCTT 57.864 39.130 0.00 0.00 0.00 2.85
252 253 4.785511 AGACGCACATGTACTTAACTCT 57.214 40.909 0.00 0.00 0.00 3.24
253 254 6.020599 CACATAGACGCACATGTACTTAACTC 60.021 42.308 0.00 0.00 33.66 3.01
254 255 5.805486 CACATAGACGCACATGTACTTAACT 59.195 40.000 0.00 0.00 33.66 2.24
255 256 5.803461 TCACATAGACGCACATGTACTTAAC 59.197 40.000 0.00 0.00 33.66 2.01
256 257 5.956642 TCACATAGACGCACATGTACTTAA 58.043 37.500 0.00 0.00 33.66 1.85
257 258 5.570234 TCACATAGACGCACATGTACTTA 57.430 39.130 0.00 0.00 33.66 2.24
258 259 4.450082 TCACATAGACGCACATGTACTT 57.550 40.909 0.00 0.00 33.66 2.24
259 260 4.450082 TTCACATAGACGCACATGTACT 57.550 40.909 0.00 0.00 33.66 2.73
260 261 6.420903 ACATATTCACATAGACGCACATGTAC 59.579 38.462 0.00 0.00 33.66 2.90
261 262 6.420604 CACATATTCACATAGACGCACATGTA 59.579 38.462 0.00 0.00 33.66 2.29
262 263 5.234972 CACATATTCACATAGACGCACATGT 59.765 40.000 0.00 0.00 35.79 3.21
263 264 5.463061 TCACATATTCACATAGACGCACATG 59.537 40.000 0.00 0.00 0.00 3.21
264 265 5.600696 TCACATATTCACATAGACGCACAT 58.399 37.500 0.00 0.00 0.00 3.21
265 266 5.004922 TCACATATTCACATAGACGCACA 57.995 39.130 0.00 0.00 0.00 4.57
272 273 6.589139 ACGCAGATGATCACATATTCACATAG 59.411 38.462 0.00 0.00 36.82 2.23
281 282 5.178061 AGAACAAACGCAGATGATCACATA 58.822 37.500 0.00 0.00 36.82 2.29
327 328 0.320421 CGACAGAAGCCCTCGGAAAA 60.320 55.000 0.00 0.00 0.00 2.29
397 398 3.044305 GTGCTTTCGACTGGCGCT 61.044 61.111 7.64 0.00 40.61 5.92
443 444 0.891904 TGCTTAACTTGGGTTCGGGC 60.892 55.000 0.00 0.00 36.92 6.13
449 450 1.328279 GTTGGCTGCTTAACTTGGGT 58.672 50.000 0.00 0.00 0.00 4.51
471 504 2.039746 TGATCAACGGGAAAGTGGTGAT 59.960 45.455 0.00 0.00 0.00 3.06
472 505 1.418264 TGATCAACGGGAAAGTGGTGA 59.582 47.619 0.00 0.00 0.00 4.02
541 574 2.353704 GCTAGGGTTTTGGACATTTGGC 60.354 50.000 0.00 0.00 0.00 4.52
591 627 2.817844 GGGGTTTAAATTGTCGCTGACT 59.182 45.455 9.49 0.00 33.15 3.41
600 636 3.418047 AGACGGTGAGGGGTTTAAATTG 58.582 45.455 0.00 0.00 0.00 2.32
605 641 0.978907 GGAAGACGGTGAGGGGTTTA 59.021 55.000 0.00 0.00 0.00 2.01
675 712 1.305887 TCGGGAGAGGGGAAAGGAC 60.306 63.158 0.00 0.00 0.00 3.85
725 762 0.179215 GATTGGAGTGTTGCTTCGCG 60.179 55.000 0.00 0.00 0.00 5.87
731 768 1.875963 CGGTGGATTGGAGTGTTGC 59.124 57.895 0.00 0.00 0.00 4.17
738 775 2.835049 TTGTGGGCGGTGGATTGGA 61.835 57.895 0.00 0.00 0.00 3.53
761 798 1.043673 CGTGGGGAGAGGAGGGTAAG 61.044 65.000 0.00 0.00 0.00 2.34
790 827 3.242936 GCTGTAAATTGTGACGTGTGGTT 60.243 43.478 0.00 0.00 0.00 3.67
795 832 1.529438 ACGGCTGTAAATTGTGACGTG 59.471 47.619 0.00 0.00 31.60 4.49
796 833 1.529438 CACGGCTGTAAATTGTGACGT 59.471 47.619 0.00 0.00 32.39 4.34
797 834 1.724654 GCACGGCTGTAAATTGTGACG 60.725 52.381 0.00 0.00 32.39 4.35
798 835 1.535462 AGCACGGCTGTAAATTGTGAC 59.465 47.619 0.00 0.00 37.57 3.67
799 836 1.804151 GAGCACGGCTGTAAATTGTGA 59.196 47.619 0.00 0.00 39.88 3.58
800 837 1.806542 AGAGCACGGCTGTAAATTGTG 59.193 47.619 0.00 0.00 39.88 3.33
801 838 1.806542 CAGAGCACGGCTGTAAATTGT 59.193 47.619 0.00 0.00 39.88 2.71
854 893 0.889186 GGTGTTCTGTGCCGGACAAT 60.889 55.000 5.05 0.00 32.80 2.71
855 894 1.525077 GGTGTTCTGTGCCGGACAA 60.525 57.895 5.05 0.00 32.80 3.18
899 938 4.821589 CGGAGGGAGCTCGTTGGC 62.822 72.222 7.83 0.00 0.00 4.52
1125 1164 4.386245 GCGTAGAGCTTGTCGAGG 57.614 61.111 8.98 0.00 44.04 4.63
1161 1224 2.328589 CCCTCCTCCTCCTCCTCCA 61.329 68.421 0.00 0.00 0.00 3.86
1299 1368 2.818132 GAGATCTGCCGGTCCAGG 59.182 66.667 0.00 0.00 33.64 4.45
1587 1656 4.201679 CCATAGCCGTCGTCCGCA 62.202 66.667 0.00 0.00 34.38 5.69
1620 1692 2.185867 GTGACCGGCTTGGCGATA 59.814 61.111 17.91 1.19 43.94 2.92
2106 2178 2.031465 TCGGCGAAAACAGGGTCC 59.969 61.111 7.35 0.00 0.00 4.46
2301 2373 0.037326 TCTGTCTCGAACCACATGCC 60.037 55.000 0.00 0.00 0.00 4.40
2322 2394 2.769095 ACCTTCCATCACCTCTTCTAGC 59.231 50.000 0.00 0.00 0.00 3.42
2347 2419 2.594303 CACGCCAAGAGCACCCAA 60.594 61.111 0.00 0.00 44.04 4.12
2565 2637 3.199289 ACATCTGCTTCATCCAGTCATCA 59.801 43.478 0.00 0.00 0.00 3.07
3024 3097 4.160439 TGTTCAGAACTTCAGATATCGGCT 59.840 41.667 14.51 0.00 0.00 5.52
3104 3188 3.372206 AGACAATGATGTGCGCTTCTAAC 59.628 43.478 9.73 0.00 40.74 2.34
3110 3194 2.005451 GAGAAGACAATGATGTGCGCT 58.995 47.619 9.73 0.00 40.74 5.92
3116 3200 3.125829 CACCGTTGGAGAAGACAATGATG 59.874 47.826 0.00 0.00 37.07 3.07
3135 3219 7.067494 AGAGAAATGCCTACAATGATTTACACC 59.933 37.037 0.00 0.00 0.00 4.16
3144 3228 4.940046 ACTGACAGAGAAATGCCTACAATG 59.060 41.667 10.08 0.00 0.00 2.82
3251 3335 6.019961 CAGATCTGAACTGAAGATAAGCGTTC 60.020 42.308 18.34 0.00 37.54 3.95
3264 3348 2.110901 AGCTTGGCAGATCTGAACTG 57.889 50.000 27.04 13.28 38.27 3.16
3267 3351 1.830279 CCAAGCTTGGCAGATCTGAA 58.170 50.000 31.70 11.53 42.21 3.02
3392 3478 2.373169 CAGGGCATATCACACCCATAGT 59.627 50.000 0.00 0.00 46.88 2.12
3500 3588 9.840427 ACCTTTCATTTGAATAACTTTATGACG 57.160 29.630 0.00 0.00 33.54 4.35
3608 3697 6.966534 AATTTTTGGAGTGTCACAGAAGAT 57.033 33.333 5.62 0.00 0.00 2.40
3615 3704 6.720012 ACAACAAAATTTTTGGAGTGTCAC 57.280 33.333 22.27 0.00 0.00 3.67
3616 3705 7.736447 AAACAACAAAATTTTTGGAGTGTCA 57.264 28.000 22.27 0.00 0.00 3.58
3617 3706 8.900762 CAAAAACAACAAAATTTTTGGAGTGTC 58.099 29.630 22.27 0.00 45.60 3.67
3618 3707 8.794308 CAAAAACAACAAAATTTTTGGAGTGT 57.206 26.923 22.27 18.85 45.60 3.55
3625 3714 8.060679 GCTGCAAACAAAAACAACAAAATTTTT 58.939 25.926 0.00 0.00 38.28 1.94
3626 3715 7.223387 TGCTGCAAACAAAAACAACAAAATTTT 59.777 25.926 0.00 0.00 0.00 1.82
3627 3716 6.698766 TGCTGCAAACAAAAACAACAAAATTT 59.301 26.923 0.00 0.00 0.00 1.82
3628 3717 6.211515 TGCTGCAAACAAAAACAACAAAATT 58.788 28.000 0.00 0.00 0.00 1.82
3629 3718 5.766222 TGCTGCAAACAAAAACAACAAAAT 58.234 29.167 0.00 0.00 0.00 1.82
3630 3719 5.173774 TGCTGCAAACAAAAACAACAAAA 57.826 30.435 0.00 0.00 0.00 2.44
3631 3720 4.818534 TGCTGCAAACAAAAACAACAAA 57.181 31.818 0.00 0.00 0.00 2.83
3632 3721 4.818534 TTGCTGCAAACAAAAACAACAA 57.181 31.818 13.51 0.00 0.00 2.83
3633 3722 4.818534 TTTGCTGCAAACAAAAACAACA 57.181 31.818 22.84 0.00 34.22 3.33
3634 3723 4.088355 GCTTTTGCTGCAAACAAAAACAAC 59.912 37.500 25.99 3.13 44.07 3.32
3635 3724 4.225208 GCTTTTGCTGCAAACAAAAACAA 58.775 34.783 25.99 9.21 44.07 2.83
3636 3725 3.365767 GGCTTTTGCTGCAAACAAAAACA 60.366 39.130 25.99 9.91 44.07 2.83
3637 3726 3.119884 AGGCTTTTGCTGCAAACAAAAAC 60.120 39.130 25.99 18.03 44.07 2.43
3638 3727 3.080319 AGGCTTTTGCTGCAAACAAAAA 58.920 36.364 25.99 11.30 44.07 1.94
3639 3728 2.709213 AGGCTTTTGCTGCAAACAAAA 58.291 38.095 25.99 20.22 46.54 2.44
3640 3729 2.399916 AGGCTTTTGCTGCAAACAAA 57.600 40.000 25.99 12.01 46.54 2.83
3641 3730 2.008329 CAAGGCTTTTGCTGCAAACAA 58.992 42.857 25.99 12.71 46.54 2.83
3642 3731 1.654317 CAAGGCTTTTGCTGCAAACA 58.346 45.000 25.99 16.04 46.54 2.83
3643 3732 0.305617 GCAAGGCTTTTGCTGCAAAC 59.694 50.000 25.99 15.86 43.44 2.93
3644 3733 2.692817 GCAAGGCTTTTGCTGCAAA 58.307 47.368 22.84 22.84 43.44 3.68
3645 3734 4.442018 GCAAGGCTTTTGCTGCAA 57.558 50.000 11.69 11.69 43.44 4.08
3655 3744 2.071778 TCTTCAAACCAAGCAAGGCT 57.928 45.000 0.00 0.00 42.56 4.58
3656 3745 2.546584 CCTTCTTCAAACCAAGCAAGGC 60.547 50.000 0.00 0.00 30.59 4.35
3657 3746 2.695147 ACCTTCTTCAAACCAAGCAAGG 59.305 45.455 0.00 0.00 37.06 3.61
3658 3747 3.381272 TGACCTTCTTCAAACCAAGCAAG 59.619 43.478 0.00 0.00 0.00 4.01
3659 3748 3.360867 TGACCTTCTTCAAACCAAGCAA 58.639 40.909 0.00 0.00 0.00 3.91
3660 3749 3.011566 TGACCTTCTTCAAACCAAGCA 57.988 42.857 0.00 0.00 0.00 3.91
3661 3750 4.590850 AATGACCTTCTTCAAACCAAGC 57.409 40.909 0.00 0.00 0.00 4.01
3662 3751 7.438160 GGTTTAAATGACCTTCTTCAAACCAAG 59.562 37.037 7.77 0.00 34.66 3.61
3663 3752 7.269316 GGTTTAAATGACCTTCTTCAAACCAA 58.731 34.615 7.77 0.00 34.66 3.67
3664 3753 6.183360 GGGTTTAAATGACCTTCTTCAAACCA 60.183 38.462 13.20 0.00 35.59 3.67
3665 3754 6.041637 AGGGTTTAAATGACCTTCTTCAAACC 59.958 38.462 0.00 0.00 37.34 3.27
3666 3755 7.050970 AGGGTTTAAATGACCTTCTTCAAAC 57.949 36.000 0.00 0.00 37.34 2.93
3667 3756 7.669089 AAGGGTTTAAATGACCTTCTTCAAA 57.331 32.000 13.08 0.00 38.96 2.69
3674 3763 9.826574 GTTTTTAAGAAGGGTTTAAATGACCTT 57.173 29.630 16.80 16.80 45.50 3.50
3675 3764 8.426489 GGTTTTTAAGAAGGGTTTAAATGACCT 58.574 33.333 0.00 0.00 35.85 3.85
3676 3765 8.426489 AGGTTTTTAAGAAGGGTTTAAATGACC 58.574 33.333 0.00 11.54 37.14 4.02
3677 3766 9.472361 GAGGTTTTTAAGAAGGGTTTAAATGAC 57.528 33.333 0.00 0.00 32.00 3.06
3678 3767 9.429109 AGAGGTTTTTAAGAAGGGTTTAAATGA 57.571 29.630 0.00 0.00 32.00 2.57
3679 3768 9.692749 GAGAGGTTTTTAAGAAGGGTTTAAATG 57.307 33.333 0.00 0.00 32.00 2.32
3680 3769 9.656323 AGAGAGGTTTTTAAGAAGGGTTTAAAT 57.344 29.630 0.00 0.00 32.00 1.40
3681 3770 9.483489 AAGAGAGGTTTTTAAGAAGGGTTTAAA 57.517 29.630 0.00 0.00 0.00 1.52
3682 3771 9.483489 AAAGAGAGGTTTTTAAGAAGGGTTTAA 57.517 29.630 0.00 0.00 0.00 1.52
3683 3772 9.483489 AAAAGAGAGGTTTTTAAGAAGGGTTTA 57.517 29.630 0.00 0.00 0.00 2.01
3684 3773 7.973048 AAAGAGAGGTTTTTAAGAAGGGTTT 57.027 32.000 0.00 0.00 0.00 3.27
3685 3774 7.618117 TCAAAAGAGAGGTTTTTAAGAAGGGTT 59.382 33.333 0.00 0.00 0.00 4.11
3686 3775 7.123383 TCAAAAGAGAGGTTTTTAAGAAGGGT 58.877 34.615 0.00 0.00 0.00 4.34
3687 3776 7.285629 ACTCAAAAGAGAGGTTTTTAAGAAGGG 59.714 37.037 0.00 0.00 39.97 3.95
3688 3777 8.226819 ACTCAAAAGAGAGGTTTTTAAGAAGG 57.773 34.615 0.00 0.00 39.97 3.46
3699 3788 7.565680 TGAGAAGTAAAACTCAAAAGAGAGGT 58.434 34.615 0.00 0.00 39.68 3.85
3700 3789 8.438676 TTGAGAAGTAAAACTCAAAAGAGAGG 57.561 34.615 0.00 0.00 45.83 3.69
3708 3797 9.301153 GAAATGCTTTTGAGAAGTAAAACTCAA 57.699 29.630 1.76 0.00 46.70 3.02
3709 3798 8.686334 AGAAATGCTTTTGAGAAGTAAAACTCA 58.314 29.630 1.76 0.00 40.66 3.41
3710 3799 9.521503 AAGAAATGCTTTTGAGAAGTAAAACTC 57.478 29.630 1.76 0.00 31.11 3.01
3711 3800 9.305925 CAAGAAATGCTTTTGAGAAGTAAAACT 57.694 29.630 1.76 0.00 33.60 2.66
3712 3801 8.542953 CCAAGAAATGCTTTTGAGAAGTAAAAC 58.457 33.333 1.76 0.00 33.60 2.43
3713 3802 8.474025 TCCAAGAAATGCTTTTGAGAAGTAAAA 58.526 29.630 1.76 0.00 33.60 1.52
3714 3803 8.006298 TCCAAGAAATGCTTTTGAGAAGTAAA 57.994 30.769 1.76 0.00 33.60 2.01
3715 3804 7.581213 TCCAAGAAATGCTTTTGAGAAGTAA 57.419 32.000 1.76 0.00 33.60 2.24
3716 3805 7.765695 ATCCAAGAAATGCTTTTGAGAAGTA 57.234 32.000 1.76 0.00 33.60 2.24
3717 3806 6.661304 ATCCAAGAAATGCTTTTGAGAAGT 57.339 33.333 1.76 0.00 33.60 3.01
3718 3807 7.958053 AAATCCAAGAAATGCTTTTGAGAAG 57.042 32.000 1.76 0.00 33.60 2.85
3761 3850 3.450817 AGAACAACCCAGAACCAAAAAGG 59.549 43.478 0.00 0.00 45.67 3.11
3762 3851 4.736126 AGAACAACCCAGAACCAAAAAG 57.264 40.909 0.00 0.00 0.00 2.27
3763 3852 5.241662 CAAAGAACAACCCAGAACCAAAAA 58.758 37.500 0.00 0.00 0.00 1.94
3764 3853 4.323104 CCAAAGAACAACCCAGAACCAAAA 60.323 41.667 0.00 0.00 0.00 2.44
3765 3854 3.196685 CCAAAGAACAACCCAGAACCAAA 59.803 43.478 0.00 0.00 0.00 3.28
3766 3855 2.763448 CCAAAGAACAACCCAGAACCAA 59.237 45.455 0.00 0.00 0.00 3.67
3767 3856 2.291930 ACCAAAGAACAACCCAGAACCA 60.292 45.455 0.00 0.00 0.00 3.67
3768 3857 2.384828 ACCAAAGAACAACCCAGAACC 58.615 47.619 0.00 0.00 0.00 3.62
3769 3858 4.465632 AAACCAAAGAACAACCCAGAAC 57.534 40.909 0.00 0.00 0.00 3.01
3770 3859 4.528596 TCAAAACCAAAGAACAACCCAGAA 59.471 37.500 0.00 0.00 0.00 3.02
3771 3860 4.090090 TCAAAACCAAAGAACAACCCAGA 58.910 39.130 0.00 0.00 0.00 3.86
3772 3861 4.464069 TCAAAACCAAAGAACAACCCAG 57.536 40.909 0.00 0.00 0.00 4.45
3773 3862 4.141824 GGATCAAAACCAAAGAACAACCCA 60.142 41.667 0.00 0.00 0.00 4.51
3774 3863 4.141824 TGGATCAAAACCAAAGAACAACCC 60.142 41.667 0.00 0.00 34.25 4.11
3775 3864 5.017294 TGGATCAAAACCAAAGAACAACC 57.983 39.130 0.00 0.00 34.25 3.77
3776 3865 6.986231 AGAATGGATCAAAACCAAAGAACAAC 59.014 34.615 0.00 0.00 40.93 3.32
3777 3866 7.123355 AGAATGGATCAAAACCAAAGAACAA 57.877 32.000 0.00 0.00 40.93 2.83
3778 3867 6.729690 AGAATGGATCAAAACCAAAGAACA 57.270 33.333 0.00 0.00 40.93 3.18
3779 3868 6.986231 ACAAGAATGGATCAAAACCAAAGAAC 59.014 34.615 0.00 0.00 40.93 3.01
3780 3869 7.123355 ACAAGAATGGATCAAAACCAAAGAA 57.877 32.000 0.00 0.00 40.93 2.52
3781 3870 6.729690 ACAAGAATGGATCAAAACCAAAGA 57.270 33.333 0.00 0.00 40.93 2.52
3782 3871 7.790823 AAACAAGAATGGATCAAAACCAAAG 57.209 32.000 0.00 0.00 40.93 2.77
3783 3872 8.572855 AAAAACAAGAATGGATCAAAACCAAA 57.427 26.923 0.00 0.00 40.93 3.28
3784 3873 9.103861 GTAAAAACAAGAATGGATCAAAACCAA 57.896 29.630 0.00 0.00 40.93 3.67
3785 3874 7.713073 GGTAAAAACAAGAATGGATCAAAACCA 59.287 33.333 0.00 0.00 41.83 3.67
3786 3875 7.713073 TGGTAAAAACAAGAATGGATCAAAACC 59.287 33.333 0.00 0.00 0.00 3.27
3787 3876 8.655651 TGGTAAAAACAAGAATGGATCAAAAC 57.344 30.769 0.00 0.00 0.00 2.43
3788 3877 9.270640 CATGGTAAAAACAAGAATGGATCAAAA 57.729 29.630 0.00 0.00 0.00 2.44
3789 3878 7.387397 GCATGGTAAAAACAAGAATGGATCAAA 59.613 33.333 0.00 0.00 0.00 2.69
3790 3879 6.873076 GCATGGTAAAAACAAGAATGGATCAA 59.127 34.615 0.00 0.00 0.00 2.57
3791 3880 6.397272 GCATGGTAAAAACAAGAATGGATCA 58.603 36.000 0.00 0.00 0.00 2.92
3792 3881 5.812127 GGCATGGTAAAAACAAGAATGGATC 59.188 40.000 0.00 0.00 0.00 3.36
3793 3882 5.484998 AGGCATGGTAAAAACAAGAATGGAT 59.515 36.000 0.00 0.00 0.00 3.41
3794 3883 4.837860 AGGCATGGTAAAAACAAGAATGGA 59.162 37.500 0.00 0.00 0.00 3.41
3795 3884 5.047092 AGAGGCATGGTAAAAACAAGAATGG 60.047 40.000 0.00 0.00 0.00 3.16
3796 3885 6.029346 AGAGGCATGGTAAAAACAAGAATG 57.971 37.500 0.00 0.00 0.00 2.67
3797 3886 6.041979 ACAAGAGGCATGGTAAAAACAAGAAT 59.958 34.615 0.00 0.00 0.00 2.40
3798 3887 5.362430 ACAAGAGGCATGGTAAAAACAAGAA 59.638 36.000 0.00 0.00 0.00 2.52
3799 3888 4.892934 ACAAGAGGCATGGTAAAAACAAGA 59.107 37.500 0.00 0.00 0.00 3.02
3800 3889 4.984161 CACAAGAGGCATGGTAAAAACAAG 59.016 41.667 0.00 0.00 0.00 3.16
3801 3890 4.202202 CCACAAGAGGCATGGTAAAAACAA 60.202 41.667 0.00 0.00 0.00 2.83
3802 3891 3.320541 CCACAAGAGGCATGGTAAAAACA 59.679 43.478 0.00 0.00 0.00 2.83
3803 3892 3.320826 ACCACAAGAGGCATGGTAAAAAC 59.679 43.478 0.00 0.00 45.04 2.43
3804 3893 3.571590 ACCACAAGAGGCATGGTAAAAA 58.428 40.909 0.00 0.00 45.04 1.94
3805 3894 3.237268 ACCACAAGAGGCATGGTAAAA 57.763 42.857 0.00 0.00 45.04 1.52
3806 3895 2.969821 ACCACAAGAGGCATGGTAAA 57.030 45.000 0.00 0.00 45.04 2.01
3808 3897 4.374689 TTTTACCACAAGAGGCATGGTA 57.625 40.909 0.00 0.00 45.04 3.25
3810 3899 4.463891 AGAATTTTACCACAAGAGGCATGG 59.536 41.667 0.00 0.00 39.57 3.66
3811 3900 5.393461 GGAGAATTTTACCACAAGAGGCATG 60.393 44.000 0.00 0.00 0.00 4.06
3812 3901 4.706962 GGAGAATTTTACCACAAGAGGCAT 59.293 41.667 0.00 0.00 0.00 4.40
3813 3902 4.079253 GGAGAATTTTACCACAAGAGGCA 58.921 43.478 0.00 0.00 0.00 4.75
3814 3903 3.444034 GGGAGAATTTTACCACAAGAGGC 59.556 47.826 0.00 0.00 0.00 4.70
3815 3904 4.662278 TGGGAGAATTTTACCACAAGAGG 58.338 43.478 0.00 0.00 0.00 3.69
3816 3905 6.648879 TTTGGGAGAATTTTACCACAAGAG 57.351 37.500 0.00 0.00 31.65 2.85
3817 3906 7.425224 TTTTTGGGAGAATTTTACCACAAGA 57.575 32.000 0.00 0.00 31.65 3.02
3818 3907 7.387673 GGATTTTTGGGAGAATTTTACCACAAG 59.612 37.037 0.00 0.00 31.65 3.16
3819 3908 7.220740 GGATTTTTGGGAGAATTTTACCACAA 58.779 34.615 0.00 0.00 31.65 3.33
3820 3909 6.239743 GGGATTTTTGGGAGAATTTTACCACA 60.240 38.462 0.00 0.00 31.65 4.17
3821 3910 6.013725 AGGGATTTTTGGGAGAATTTTACCAC 60.014 38.462 0.00 0.00 31.65 4.16
3822 3911 6.088137 AGGGATTTTTGGGAGAATTTTACCA 58.912 36.000 0.00 0.00 0.00 3.25
3823 3912 6.351881 GGAGGGATTTTTGGGAGAATTTTACC 60.352 42.308 0.00 0.00 0.00 2.85
3824 3913 6.440647 AGGAGGGATTTTTGGGAGAATTTTAC 59.559 38.462 0.00 0.00 0.00 2.01
3825 3914 6.570680 AGGAGGGATTTTTGGGAGAATTTTA 58.429 36.000 0.00 0.00 0.00 1.52
3826 3915 5.415065 AGGAGGGATTTTTGGGAGAATTTT 58.585 37.500 0.00 0.00 0.00 1.82
3827 3916 5.028678 AGGAGGGATTTTTGGGAGAATTT 57.971 39.130 0.00 0.00 0.00 1.82
3828 3917 4.699566 AGGAGGGATTTTTGGGAGAATT 57.300 40.909 0.00 0.00 0.00 2.17
3829 3918 4.572870 GGAAGGAGGGATTTTTGGGAGAAT 60.573 45.833 0.00 0.00 0.00 2.40
3830 3919 3.245622 GGAAGGAGGGATTTTTGGGAGAA 60.246 47.826 0.00 0.00 0.00 2.87
3831 3920 2.311841 GGAAGGAGGGATTTTTGGGAGA 59.688 50.000 0.00 0.00 0.00 3.71
3832 3921 2.042979 TGGAAGGAGGGATTTTTGGGAG 59.957 50.000 0.00 0.00 0.00 4.30
3833 3922 2.077803 TGGAAGGAGGGATTTTTGGGA 58.922 47.619 0.00 0.00 0.00 4.37
3834 3923 2.179427 GTGGAAGGAGGGATTTTTGGG 58.821 52.381 0.00 0.00 0.00 4.12
3835 3924 3.175438 AGTGGAAGGAGGGATTTTTGG 57.825 47.619 0.00 0.00 0.00 3.28
3836 3925 5.185828 CCTAAAGTGGAAGGAGGGATTTTTG 59.814 44.000 0.00 0.00 34.58 2.44
3837 3926 5.333581 CCTAAAGTGGAAGGAGGGATTTTT 58.666 41.667 0.00 0.00 34.58 1.94
3838 3927 4.935578 CCTAAAGTGGAAGGAGGGATTTT 58.064 43.478 0.00 0.00 34.58 1.82
3839 3928 4.592997 CCTAAAGTGGAAGGAGGGATTT 57.407 45.455 0.00 0.00 34.58 2.17
3844 3933 0.991920 TGCCCTAAAGTGGAAGGAGG 59.008 55.000 0.00 0.00 34.58 4.30
3845 3934 2.879103 TTGCCCTAAAGTGGAAGGAG 57.121 50.000 0.00 0.00 34.58 3.69
3846 3935 2.025321 GGATTGCCCTAAAGTGGAAGGA 60.025 50.000 0.00 0.00 34.58 3.36
3847 3936 2.291540 TGGATTGCCCTAAAGTGGAAGG 60.292 50.000 0.00 0.00 35.38 3.46
3848 3937 3.085952 TGGATTGCCCTAAAGTGGAAG 57.914 47.619 0.00 0.00 35.38 3.46
3849 3938 3.430453 CTTGGATTGCCCTAAAGTGGAA 58.570 45.455 0.00 0.00 35.38 3.53
3850 3939 2.883888 GCTTGGATTGCCCTAAAGTGGA 60.884 50.000 0.00 0.00 35.38 4.02
3851 3940 1.478105 GCTTGGATTGCCCTAAAGTGG 59.522 52.381 0.00 0.00 35.38 4.00
3852 3941 2.170166 TGCTTGGATTGCCCTAAAGTG 58.830 47.619 0.00 0.00 35.38 3.16
3853 3942 2.603075 TGCTTGGATTGCCCTAAAGT 57.397 45.000 0.00 0.00 35.38 2.66
3854 3943 3.181472 GGAATGCTTGGATTGCCCTAAAG 60.181 47.826 0.00 0.00 35.38 1.85
3855 3944 2.765699 GGAATGCTTGGATTGCCCTAAA 59.234 45.455 0.00 0.00 35.38 1.85
3856 3945 2.387757 GGAATGCTTGGATTGCCCTAA 58.612 47.619 0.00 0.00 35.38 2.69
3857 3946 1.750332 CGGAATGCTTGGATTGCCCTA 60.750 52.381 1.44 0.00 35.38 3.53
3858 3947 1.039233 CGGAATGCTTGGATTGCCCT 61.039 55.000 1.44 0.00 35.38 5.19
3859 3948 1.322538 ACGGAATGCTTGGATTGCCC 61.323 55.000 1.44 0.00 0.00 5.36
3860 3949 0.101219 GACGGAATGCTTGGATTGCC 59.899 55.000 1.44 0.00 0.00 4.52
3861 3950 0.101219 GGACGGAATGCTTGGATTGC 59.899 55.000 0.00 0.00 0.00 3.56
3862 3951 0.740737 GGGACGGAATGCTTGGATTG 59.259 55.000 0.00 0.00 0.00 2.67
3863 3952 0.331278 TGGGACGGAATGCTTGGATT 59.669 50.000 0.00 0.00 0.00 3.01
3864 3953 0.331278 TTGGGACGGAATGCTTGGAT 59.669 50.000 0.00 0.00 0.00 3.41
3865 3954 0.608035 GTTGGGACGGAATGCTTGGA 60.608 55.000 0.00 0.00 0.00 3.53
3866 3955 0.893270 TGTTGGGACGGAATGCTTGG 60.893 55.000 0.00 0.00 0.00 3.61
3867 3956 0.958091 TTGTTGGGACGGAATGCTTG 59.042 50.000 0.00 0.00 0.00 4.01
3868 3957 1.247567 CTTGTTGGGACGGAATGCTT 58.752 50.000 0.00 0.00 0.00 3.91
3869 3958 0.110486 ACTTGTTGGGACGGAATGCT 59.890 50.000 0.00 0.00 0.00 3.79
3870 3959 0.521735 GACTTGTTGGGACGGAATGC 59.478 55.000 0.00 0.00 0.00 3.56
3871 3960 1.890876 TGACTTGTTGGGACGGAATG 58.109 50.000 0.00 0.00 0.00 2.67
3872 3961 2.649531 TTGACTTGTTGGGACGGAAT 57.350 45.000 0.00 0.00 0.00 3.01
3873 3962 2.421751 TTTGACTTGTTGGGACGGAA 57.578 45.000 0.00 0.00 0.00 4.30
3874 3963 2.500229 GATTTGACTTGTTGGGACGGA 58.500 47.619 0.00 0.00 0.00 4.69
3875 3964 1.539827 GGATTTGACTTGTTGGGACGG 59.460 52.381 0.00 0.00 0.00 4.79
3876 3965 2.226330 TGGATTTGACTTGTTGGGACG 58.774 47.619 0.00 0.00 0.00 4.79
3877 3966 4.871933 AATGGATTTGACTTGTTGGGAC 57.128 40.909 0.00 0.00 0.00 4.46
3878 3967 5.885449 AAAATGGATTTGACTTGTTGGGA 57.115 34.783 0.00 0.00 0.00 4.37
3879 3968 5.239087 CCAAAAATGGATTTGACTTGTTGGG 59.761 40.000 1.56 0.00 41.73 4.12
3880 3969 6.054295 TCCAAAAATGGATTTGACTTGTTGG 58.946 36.000 1.56 0.00 41.73 3.77
3881 3970 7.733402 ATCCAAAAATGGATTTGACTTGTTG 57.267 32.000 4.53 0.00 45.80 3.33
3893 3982 9.859152 ACAAAAGGATAAAAATCCAAAAATGGA 57.141 25.926 7.14 0.00 43.14 3.41
3918 4007 7.064490 TGGCAGAATTGTTTTGAGAAGAAAAAC 59.936 33.333 5.12 5.12 44.24 2.43
3919 4008 7.102346 TGGCAGAATTGTTTTGAGAAGAAAAA 58.898 30.769 0.00 0.00 0.00 1.94
3920 4009 6.638610 TGGCAGAATTGTTTTGAGAAGAAAA 58.361 32.000 0.00 0.00 0.00 2.29
3921 4010 6.219417 TGGCAGAATTGTTTTGAGAAGAAA 57.781 33.333 0.00 0.00 0.00 2.52
3922 4011 5.850557 TGGCAGAATTGTTTTGAGAAGAA 57.149 34.783 0.00 0.00 0.00 2.52
3923 4012 6.409524 AATGGCAGAATTGTTTTGAGAAGA 57.590 33.333 0.00 0.00 0.00 2.87
3924 4013 8.767478 AATAATGGCAGAATTGTTTTGAGAAG 57.233 30.769 0.00 0.00 0.00 2.85
3925 4014 9.206870 GAAATAATGGCAGAATTGTTTTGAGAA 57.793 29.630 0.00 0.00 32.87 2.87
3926 4015 8.587608 AGAAATAATGGCAGAATTGTTTTGAGA 58.412 29.630 0.00 0.00 32.87 3.27
3927 4016 8.767478 AGAAATAATGGCAGAATTGTTTTGAG 57.233 30.769 0.00 0.00 32.87 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.