Multiple sequence alignment - TraesCS3B01G377100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G377100 chr3B 100.000 4446 0 0 1 4446 593559970 593564415 0.000000e+00 8211.0
1 TraesCS3B01G377100 chr3B 93.636 110 7 0 314 423 40198618 40198727 9.890000e-37 165.0
2 TraesCS3B01G377100 chr3B 93.519 108 7 0 315 422 561436954 561436847 1.280000e-35 161.0
3 TraesCS3B01G377100 chr3A 92.731 1362 74 11 2267 3614 594525130 594526480 0.000000e+00 1943.0
4 TraesCS3B01G377100 chr3A 90.582 1391 70 24 676 2037 594523348 594524706 0.000000e+00 1786.0
5 TraesCS3B01G377100 chr3A 87.234 517 31 12 3936 4446 594526536 594527023 1.400000e-154 556.0
6 TraesCS3B01G377100 chr3A 88.125 320 29 5 3 319 594521407 594521720 5.430000e-99 372.0
7 TraesCS3B01G377100 chr3A 90.909 231 16 4 2042 2270 594524826 594525053 5.590000e-79 305.0
8 TraesCS3B01G377100 chr3A 92.593 108 8 0 316 423 576567269 576567376 5.950000e-34 156.0
9 TraesCS3B01G377100 chr3A 96.429 56 2 0 3718 3773 594526479 594526534 4.740000e-15 93.5
10 TraesCS3B01G377100 chr3A 94.000 50 3 0 421 470 667291564 667291515 4.770000e-10 76.8
11 TraesCS3B01G377100 chr3D 91.431 1097 60 12 675 1751 452176426 452177508 0.000000e+00 1474.0
12 TraesCS3B01G377100 chr3D 94.568 718 32 3 2904 3614 452178690 452179407 0.000000e+00 1103.0
13 TraesCS3B01G377100 chr3D 87.761 719 59 20 2149 2858 452177992 452178690 0.000000e+00 813.0
14 TraesCS3B01G377100 chr3D 84.899 543 38 22 3936 4446 452179460 452179990 3.970000e-140 508.0
15 TraesCS3B01G377100 chr3D 95.238 168 7 1 3773 3940 396430167 396430333 9.480000e-67 265.0
16 TraesCS3B01G377100 chr3D 93.064 173 11 1 3771 3943 6669551 6669722 7.380000e-63 252.0
17 TraesCS3B01G377100 chr3D 92.857 42 3 0 316 357 435489220 435489261 1.340000e-05 62.1
18 TraesCS3B01G377100 chr3D 94.444 36 2 0 322 357 435489264 435489299 6.210000e-04 56.5
19 TraesCS3B01G377100 chr3D 94.444 36 1 1 395 429 310083207 310083172 2.000000e-03 54.7
20 TraesCS3B01G377100 chr5D 94.253 174 8 2 3767 3939 60139738 60139910 9.480000e-67 265.0
21 TraesCS3B01G377100 chr5D 94.737 38 2 0 395 432 356899596 356899633 4.800000e-05 60.2
22 TraesCS3B01G377100 chr5D 96.970 33 1 0 394 426 447227827 447227795 6.210000e-04 56.5
23 TraesCS3B01G377100 chr6D 93.678 174 10 1 3771 3944 460272701 460272529 4.410000e-65 259.0
24 TraesCS3B01G377100 chr6D 90.179 112 10 1 311 422 200871671 200871781 1.290000e-30 145.0
25 TraesCS3B01G377100 chr6D 90.090 111 11 0 316 426 435974349 435974459 1.290000e-30 145.0
26 TraesCS3B01G377100 chr1B 93.678 174 7 3 3767 3938 371457321 371457492 1.590000e-64 257.0
27 TraesCS3B01G377100 chr1B 81.421 183 21 9 421 596 168416806 168416982 2.160000e-28 137.0
28 TraesCS3B01G377100 chr1B 85.586 111 14 1 421 531 553144914 553144806 1.010000e-21 115.0
29 TraesCS3B01G377100 chr7D 94.578 166 8 1 3773 3938 43439292 43439128 5.710000e-64 255.0
30 TraesCS3B01G377100 chr7D 92.737 179 9 4 3772 3949 363148832 363149007 5.710000e-64 255.0
31 TraesCS3B01G377100 chr7D 90.374 187 14 4 3759 3944 184381214 184381397 4.440000e-60 243.0
32 TraesCS3B01G377100 chr7D 90.654 107 10 0 316 422 256191574 256191468 4.640000e-30 143.0
33 TraesCS3B01G377100 chr4D 92.571 175 11 2 3764 3938 207542444 207542616 2.660000e-62 250.0
34 TraesCS3B01G377100 chr4D 90.909 110 10 0 316 425 483110243 483110134 9.960000e-32 148.0
35 TraesCS3B01G377100 chr4D 96.970 33 1 0 392 424 217813955 217813987 6.210000e-04 56.5
36 TraesCS3B01G377100 chr6B 98.246 114 2 0 3613 3726 120355396 120355509 2.710000e-47 200.0
37 TraesCS3B01G377100 chr6B 96.396 111 4 0 3614 3724 27997644 27997534 2.730000e-42 183.0
38 TraesCS3B01G377100 chr5B 100.000 108 0 0 3614 3721 669484061 669484168 2.710000e-47 200.0
39 TraesCS3B01G377100 chr5B 98.198 111 2 0 3611 3721 70910685 70910795 1.260000e-45 195.0
40 TraesCS3B01G377100 chr5B 91.667 108 9 0 316 423 416553574 416553467 2.770000e-32 150.0
41 TraesCS3B01G377100 chr5B 90.265 113 10 1 314 426 57708126 57708015 3.580000e-31 147.0
42 TraesCS3B01G377100 chr5B 78.462 130 21 7 31 156 607879090 607878964 1.330000e-10 78.7
43 TraesCS3B01G377100 chrUn 97.414 116 2 1 3610 3724 77508816 77508701 3.510000e-46 196.0
44 TraesCS3B01G377100 chrUn 87.143 70 7 2 354 422 42626125 42626193 1.330000e-10 78.7
45 TraesCS3B01G377100 chrUn 86.957 69 9 0 354 422 42902122 42902054 1.330000e-10 78.7
46 TraesCS3B01G377100 chrUn 97.436 39 1 0 353 391 63343488 63343526 2.870000e-07 67.6
47 TraesCS3B01G377100 chrUn 97.436 39 1 0 353 391 313696463 313696501 2.870000e-07 67.6
48 TraesCS3B01G377100 chrUn 100.000 30 0 0 395 424 90968795 90968766 6.210000e-04 56.5
49 TraesCS3B01G377100 chrUn 100.000 30 0 0 395 424 302607851 302607880 6.210000e-04 56.5
50 TraesCS3B01G377100 chrUn 100.000 30 0 0 395 424 340429752 340429723 6.210000e-04 56.5
51 TraesCS3B01G377100 chrUn 100.000 28 0 0 397 424 75211154 75211181 8.000000e-03 52.8
52 TraesCS3B01G377100 chr2D 98.214 112 2 0 3609 3720 247203387 247203498 3.510000e-46 196.0
53 TraesCS3B01G377100 chr2D 98.214 112 2 0 3609 3720 622521128 622521017 3.510000e-46 196.0
54 TraesCS3B01G377100 chr2D 91.818 110 9 0 313 422 643841000 643841109 2.140000e-33 154.0
55 TraesCS3B01G377100 chr2D 85.981 107 15 0 316 422 310767453 310767559 1.010000e-21 115.0
56 TraesCS3B01G377100 chr2B 95.902 122 4 1 3603 3724 715014992 715014872 3.510000e-46 196.0
57 TraesCS3B01G377100 chr2B 93.636 110 7 0 313 422 44347170 44347061 9.890000e-37 165.0
58 TraesCS3B01G377100 chr5A 92.424 132 7 3 3606 3737 362877242 362877370 7.590000e-43 185.0
59 TraesCS3B01G377100 chr5A 90.909 110 10 0 316 425 362173237 362173346 9.960000e-32 148.0
60 TraesCS3B01G377100 chr5A 90.909 110 10 0 313 422 586310210 586310101 9.960000e-32 148.0
61 TraesCS3B01G377100 chr5A 90.179 112 11 0 315 426 570510598 570510487 3.580000e-31 147.0
62 TraesCS3B01G377100 chr5A 80.000 155 25 6 23 174 482901552 482901703 4.700000e-20 110.0
63 TraesCS3B01G377100 chr4B 91.525 118 9 1 313 429 565865964 565865847 1.280000e-35 161.0
64 TraesCS3B01G377100 chr4B 93.519 108 7 0 315 422 650659911 650660018 1.280000e-35 161.0
65 TraesCS3B01G377100 chr4B 81.481 162 22 8 21 178 508548610 508548767 4.670000e-25 126.0
66 TraesCS3B01G377100 chr7B 92.035 113 8 1 310 422 578195089 578195200 1.660000e-34 158.0
67 TraesCS3B01G377100 chr7B 87.692 130 14 2 303 432 624346530 624346657 2.770000e-32 150.0
68 TraesCS3B01G377100 chr7A 92.593 108 8 0 315 422 30135292 30135399 5.950000e-34 156.0
69 TraesCS3B01G377100 chr7A 79.888 179 25 6 421 593 439809155 439809328 2.170000e-23 121.0
70 TraesCS3B01G377100 chr2A 91.667 108 9 0 316 423 470433228 470433121 2.770000e-32 150.0
71 TraesCS3B01G377100 chr6A 91.589 107 9 0 316 422 200719987 200719881 9.960000e-32 148.0
72 TraesCS3B01G377100 chr6A 90.090 111 11 0 316 426 91886124 91886014 1.290000e-30 145.0
73 TraesCS3B01G377100 chr1A 90.909 110 10 0 313 422 339003492 339003601 9.960000e-32 148.0
74 TraesCS3B01G377100 chr1A 90.179 112 11 0 313 424 204618376 204618265 3.580000e-31 147.0
75 TraesCS3B01G377100 chr1A 90.090 111 11 0 316 426 117978665 117978555 1.290000e-30 145.0
76 TraesCS3B01G377100 chr1A 88.793 116 11 2 309 423 511498913 511498799 1.670000e-29 141.0
77 TraesCS3B01G377100 chr1A 88.596 114 13 0 313 426 38849385 38849498 6.000000e-29 139.0
78 TraesCS3B01G377100 chr1A 81.183 186 22 8 419 596 115970179 115970359 2.160000e-28 137.0
79 TraesCS3B01G377100 chr1A 83.929 112 16 1 420 531 506545516 506545407 6.080000e-19 106.0
80 TraesCS3B01G377100 chr1A 85.882 85 6 6 28 112 579948843 579948921 7.920000e-13 86.1
81 TraesCS3B01G377100 chr1D 80.874 183 22 10 421 596 110603958 110604134 1.000000e-26 132.0
82 TraesCS3B01G377100 chr1D 85.714 112 14 1 420 531 410500448 410500339 2.810000e-22 117.0
83 TraesCS3B01G377100 chr1D 100.000 30 0 0 395 424 180698051 180698022 6.210000e-04 56.5
84 TraesCS3B01G377100 chr1D 100.000 30 0 0 395 424 494876277 494876248 6.210000e-04 56.5
85 TraesCS3B01G377100 chr1D 100.000 28 0 0 395 422 3824239 3824266 8.000000e-03 52.8
86 TraesCS3B01G377100 chr1D 94.286 35 1 1 396 429 441594079 441594113 8.000000e-03 52.8
87 TraesCS3B01G377100 chr4A 81.443 97 14 3 436 531 576918539 576918446 4.770000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G377100 chr3B 593559970 593564415 4445 False 8211.000000 8211 100.000000 1 4446 1 chr3B.!!$F2 4445
1 TraesCS3B01G377100 chr3A 594521407 594527023 5616 False 842.583333 1943 91.001667 3 4446 6 chr3A.!!$F2 4443
2 TraesCS3B01G377100 chr3D 452176426 452179990 3564 False 974.500000 1474 89.664750 675 4446 4 chr3D.!!$F4 3771

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
231 232 0.184933 AGAGATGAGAGAGGGGGTCG 59.815 60.0 0.0 0.0 0.00 4.79 F
1628 3031 0.254747 TATTGCTACCAGCCCACCAC 59.745 55.0 0.0 0.0 41.51 4.16 F
1634 3037 0.474079 TACCAGCCCACCACCTTGTA 60.474 55.0 0.0 0.0 0.00 2.41 F
2872 4576 0.321387 AGTGTGGAGCATGAGCAGTG 60.321 55.0 0.0 0.0 45.49 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1859 3263 0.171903 TAGGTAGGCAGTTTCGTCGC 59.828 55.0 0.00 0.00 0.00 5.19 R
2485 4181 0.244994 GGCAGAGCAGAGTCTTTCGA 59.755 55.0 0.00 0.00 0.00 3.71 R
2982 4686 0.336048 CCCCATTGGACCATTCCTGT 59.664 55.0 3.62 0.00 43.31 4.00 R
3702 5415 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.0 14.79 0.04 33.41 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.690865 TGGGTGAAACAAGTAGACTGAAAT 58.309 37.500 0.00 0.00 39.98 2.17
26 27 5.530915 TGGGTGAAACAAGTAGACTGAAATG 59.469 40.000 0.00 0.00 39.98 2.32
86 87 3.399330 TCTTGTTCTAAAGGTCTTGGCG 58.601 45.455 0.00 0.00 0.00 5.69
160 161 9.769093 AAAGCTACGAATAATTAACATTGTGAC 57.231 29.630 0.00 0.00 0.00 3.67
178 179 6.899393 TGTGACAGAGAAAATAAAAGGCAT 57.101 33.333 0.00 0.00 0.00 4.40
180 181 8.579850 TGTGACAGAGAAAATAAAAGGCATAT 57.420 30.769 0.00 0.00 0.00 1.78
206 207 4.009675 TGTTTCTCCATGCCTTCATGTAC 58.990 43.478 4.80 0.00 46.64 2.90
207 208 2.602257 TCTCCATGCCTTCATGTACG 57.398 50.000 4.80 0.00 46.64 3.67
208 209 1.831106 TCTCCATGCCTTCATGTACGT 59.169 47.619 0.00 0.00 46.64 3.57
209 210 1.935873 CTCCATGCCTTCATGTACGTG 59.064 52.381 8.90 8.90 46.64 4.49
210 211 1.552792 TCCATGCCTTCATGTACGTGA 59.447 47.619 13.87 13.87 46.64 4.35
211 212 1.935873 CCATGCCTTCATGTACGTGAG 59.064 52.381 16.95 8.65 46.64 3.51
212 213 2.418609 CCATGCCTTCATGTACGTGAGA 60.419 50.000 16.95 8.40 46.64 3.27
223 224 4.473477 TGTACGTGAGAGAGATGAGAGA 57.527 45.455 0.00 0.00 0.00 3.10
227 228 2.586425 GTGAGAGAGATGAGAGAGGGG 58.414 57.143 0.00 0.00 0.00 4.79
230 231 1.499007 AGAGAGATGAGAGAGGGGGTC 59.501 57.143 0.00 0.00 0.00 4.46
231 232 0.184933 AGAGATGAGAGAGGGGGTCG 59.815 60.000 0.00 0.00 0.00 4.79
267 270 3.270877 CAACATAGGCCCACTTAGTGAC 58.729 50.000 14.66 5.40 35.23 3.67
272 275 1.348036 AGGCCCACTTAGTGACTGAAC 59.652 52.381 14.66 0.00 35.23 3.18
280 283 6.934645 CCCACTTAGTGACTGAACTTAAATCA 59.065 38.462 14.66 0.00 35.23 2.57
299 303 5.589367 ATCATATATGCAGAAAGGTGGGT 57.411 39.130 7.92 0.00 0.00 4.51
319 323 7.034397 GTGGGTTGTGAATCTACTTACTACTC 58.966 42.308 0.00 0.00 0.00 2.59
320 324 6.952358 TGGGTTGTGAATCTACTTACTACTCT 59.048 38.462 0.00 0.00 0.00 3.24
321 325 7.122353 TGGGTTGTGAATCTACTTACTACTCTC 59.878 40.741 0.00 0.00 0.00 3.20
322 326 7.339976 GGGTTGTGAATCTACTTACTACTCTCT 59.660 40.741 0.00 0.00 0.00 3.10
323 327 8.400186 GGTTGTGAATCTACTTACTACTCTCTC 58.600 40.741 0.00 0.00 0.00 3.20
324 328 8.400186 GTTGTGAATCTACTTACTACTCTCTCC 58.600 40.741 0.00 0.00 0.00 3.71
325 329 6.762187 TGTGAATCTACTTACTACTCTCTCCG 59.238 42.308 0.00 0.00 0.00 4.63
326 330 6.762661 GTGAATCTACTTACTACTCTCTCCGT 59.237 42.308 0.00 0.00 0.00 4.69
327 331 7.280652 GTGAATCTACTTACTACTCTCTCCGTT 59.719 40.741 0.00 0.00 0.00 4.44
328 332 7.495279 TGAATCTACTTACTACTCTCTCCGTTC 59.505 40.741 0.00 0.00 0.00 3.95
329 333 5.669477 TCTACTTACTACTCTCTCCGTTCC 58.331 45.833 0.00 0.00 0.00 3.62
330 334 3.269178 ACTTACTACTCTCTCCGTTCCG 58.731 50.000 0.00 0.00 0.00 4.30
331 335 3.055530 ACTTACTACTCTCTCCGTTCCGA 60.056 47.826 0.00 0.00 0.00 4.55
332 336 2.486472 ACTACTCTCTCCGTTCCGAA 57.514 50.000 0.00 0.00 0.00 4.30
333 337 3.002038 ACTACTCTCTCCGTTCCGAAT 57.998 47.619 0.00 0.00 0.00 3.34
334 338 3.354467 ACTACTCTCTCCGTTCCGAATT 58.646 45.455 0.00 0.00 0.00 2.17
335 339 4.521146 ACTACTCTCTCCGTTCCGAATTA 58.479 43.478 0.00 0.00 0.00 1.40
336 340 3.779271 ACTCTCTCCGTTCCGAATTAC 57.221 47.619 0.00 0.00 0.00 1.89
337 341 3.354467 ACTCTCTCCGTTCCGAATTACT 58.646 45.455 0.00 0.00 0.00 2.24
338 342 3.762823 ACTCTCTCCGTTCCGAATTACTT 59.237 43.478 0.00 0.00 0.00 2.24
339 343 4.946157 ACTCTCTCCGTTCCGAATTACTTA 59.054 41.667 0.00 0.00 0.00 2.24
340 344 5.593502 ACTCTCTCCGTTCCGAATTACTTAT 59.406 40.000 0.00 0.00 0.00 1.73
341 345 6.069684 TCTCTCCGTTCCGAATTACTTATC 57.930 41.667 0.00 0.00 0.00 1.75
342 346 4.852138 TCTCCGTTCCGAATTACTTATCG 58.148 43.478 0.00 0.00 38.74 2.92
343 347 3.374745 TCCGTTCCGAATTACTTATCGC 58.625 45.455 0.00 0.00 37.73 4.58
344 348 3.117794 CCGTTCCGAATTACTTATCGCA 58.882 45.455 0.00 0.00 37.73 5.10
345 349 3.060740 CCGTTCCGAATTACTTATCGCAC 60.061 47.826 0.00 0.00 37.73 5.34
346 350 3.360384 CGTTCCGAATTACTTATCGCACG 60.360 47.826 0.00 0.00 37.64 5.34
347 351 3.425577 TCCGAATTACTTATCGCACGT 57.574 42.857 0.00 0.00 37.73 4.49
348 352 4.550577 TCCGAATTACTTATCGCACGTA 57.449 40.909 0.00 0.00 37.73 3.57
349 353 5.112220 TCCGAATTACTTATCGCACGTAT 57.888 39.130 0.00 0.00 37.73 3.06
350 354 6.239908 TCCGAATTACTTATCGCACGTATA 57.760 37.500 0.00 0.00 37.73 1.47
351 355 6.667370 TCCGAATTACTTATCGCACGTATAA 58.333 36.000 0.00 0.00 37.73 0.98
352 356 7.138081 TCCGAATTACTTATCGCACGTATAAA 58.862 34.615 0.00 0.00 37.73 1.40
353 357 7.809331 TCCGAATTACTTATCGCACGTATAAAT 59.191 33.333 0.00 0.00 37.73 1.40
354 358 7.891220 CCGAATTACTTATCGCACGTATAAATG 59.109 37.037 0.00 0.00 37.73 2.32
355 359 8.422457 CGAATTACTTATCGCACGTATAAATGT 58.578 33.333 0.00 0.00 31.71 2.71
365 369 8.806177 TCGCACGTATAAATGTATTTAGATGT 57.194 30.769 9.76 9.76 41.63 3.06
366 370 9.896263 TCGCACGTATAAATGTATTTAGATGTA 57.104 29.630 13.44 1.13 40.00 2.29
394 398 6.759497 AGTTCTAAATACACCCATTTCAGC 57.241 37.500 0.00 0.00 30.84 4.26
395 399 5.354234 AGTTCTAAATACACCCATTTCAGCG 59.646 40.000 0.00 0.00 30.84 5.18
396 400 5.092554 TCTAAATACACCCATTTCAGCGA 57.907 39.130 0.00 0.00 30.84 4.93
397 401 5.680619 TCTAAATACACCCATTTCAGCGAT 58.319 37.500 0.00 0.00 30.84 4.58
398 402 4.637483 AAATACACCCATTTCAGCGATG 57.363 40.909 0.00 0.00 0.00 3.84
399 403 3.558931 ATACACCCATTTCAGCGATGA 57.441 42.857 0.00 0.00 0.00 2.92
400 404 1.742761 ACACCCATTTCAGCGATGAG 58.257 50.000 2.57 0.00 0.00 2.90
401 405 1.003580 ACACCCATTTCAGCGATGAGT 59.996 47.619 2.57 0.00 0.00 3.41
402 406 2.236146 ACACCCATTTCAGCGATGAGTA 59.764 45.455 2.57 0.00 0.00 2.59
403 407 3.270027 CACCCATTTCAGCGATGAGTAA 58.730 45.455 2.57 0.00 0.00 2.24
404 408 3.879295 CACCCATTTCAGCGATGAGTAAT 59.121 43.478 2.57 0.00 0.00 1.89
405 409 4.336433 CACCCATTTCAGCGATGAGTAATT 59.664 41.667 2.57 0.00 0.00 1.40
406 410 4.949856 ACCCATTTCAGCGATGAGTAATTT 59.050 37.500 2.57 0.00 0.00 1.82
407 411 5.163622 ACCCATTTCAGCGATGAGTAATTTG 60.164 40.000 2.57 0.00 0.00 2.32
408 412 5.276270 CCATTTCAGCGATGAGTAATTTGG 58.724 41.667 2.57 0.00 0.00 3.28
409 413 5.066375 CCATTTCAGCGATGAGTAATTTGGA 59.934 40.000 2.57 0.00 0.00 3.53
410 414 6.404623 CCATTTCAGCGATGAGTAATTTGGAA 60.405 38.462 2.57 0.00 0.00 3.53
411 415 5.545658 TTCAGCGATGAGTAATTTGGAAC 57.454 39.130 2.57 0.00 0.00 3.62
412 416 3.616821 TCAGCGATGAGTAATTTGGAACG 59.383 43.478 0.00 0.00 0.00 3.95
413 417 2.936498 AGCGATGAGTAATTTGGAACGG 59.064 45.455 0.00 0.00 0.00 4.44
414 418 2.933906 GCGATGAGTAATTTGGAACGGA 59.066 45.455 0.00 0.00 0.00 4.69
415 419 3.001330 GCGATGAGTAATTTGGAACGGAG 59.999 47.826 0.00 0.00 0.00 4.63
416 420 3.555956 CGATGAGTAATTTGGAACGGAGG 59.444 47.826 0.00 0.00 0.00 4.30
417 421 3.343941 TGAGTAATTTGGAACGGAGGG 57.656 47.619 0.00 0.00 0.00 4.30
418 422 2.907696 TGAGTAATTTGGAACGGAGGGA 59.092 45.455 0.00 0.00 0.00 4.20
419 423 3.055385 TGAGTAATTTGGAACGGAGGGAG 60.055 47.826 0.00 0.00 0.00 4.30
420 424 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
421 425 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
422 426 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
423 427 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
424 428 2.019807 TTGGAACGGAGGGAGTACTT 57.980 50.000 0.00 0.00 0.00 2.24
425 429 2.905415 TGGAACGGAGGGAGTACTTA 57.095 50.000 0.00 0.00 0.00 2.24
433 437 6.018433 ACGGAGGGAGTACTTATAAAGGTA 57.982 41.667 0.00 0.00 0.00 3.08
434 438 5.830457 ACGGAGGGAGTACTTATAAAGGTAC 59.170 44.000 0.00 6.84 38.69 3.34
442 446 7.704047 GGAGTACTTATAAAGGTACGAGTTTGG 59.296 40.741 0.00 0.00 41.94 3.28
448 452 6.980051 ATAAAGGTACGAGTTTGGTGAATC 57.020 37.500 0.00 0.00 0.00 2.52
463 467 6.959639 TGGTGAATCCAAATAATTAGAGCC 57.040 37.500 0.00 0.00 44.12 4.70
473 477 6.461509 CCAAATAATTAGAGCCATCCAACCAC 60.462 42.308 0.00 0.00 0.00 4.16
484 488 4.398319 CCATCCAACCACCTATATCCAAC 58.602 47.826 0.00 0.00 0.00 3.77
485 489 3.830744 TCCAACCACCTATATCCAACG 57.169 47.619 0.00 0.00 0.00 4.10
491 495 4.028131 ACCACCTATATCCAACGTCTCAA 58.972 43.478 0.00 0.00 0.00 3.02
495 499 4.202161 ACCTATATCCAACGTCTCAAGCTG 60.202 45.833 0.00 0.00 0.00 4.24
496 500 3.895232 ATATCCAACGTCTCAAGCTGT 57.105 42.857 0.00 0.00 0.00 4.40
499 503 6.650427 ATATCCAACGTCTCAAGCTGTATA 57.350 37.500 0.00 0.00 0.00 1.47
503 507 5.580691 TCCAACGTCTCAAGCTGTATAAATG 59.419 40.000 0.00 0.00 0.00 2.32
505 509 6.258727 CCAACGTCTCAAGCTGTATAAATGAT 59.741 38.462 0.00 0.00 0.00 2.45
506 510 6.834959 ACGTCTCAAGCTGTATAAATGATG 57.165 37.500 0.00 0.00 0.00 3.07
507 511 6.341316 ACGTCTCAAGCTGTATAAATGATGT 58.659 36.000 0.00 0.00 0.00 3.06
508 512 7.489160 ACGTCTCAAGCTGTATAAATGATGTA 58.511 34.615 0.00 0.00 0.00 2.29
663 2022 1.026718 CCCTTGCCGCTAAGAACAGG 61.027 60.000 0.00 0.00 0.00 4.00
669 2028 1.880646 GCCGCTAAGAACAGGTTTCCA 60.881 52.381 0.00 0.00 0.00 3.53
679 2062 1.003233 AGGTTTCCAGAAGCGAGGC 60.003 57.895 0.00 0.00 0.00 4.70
690 2073 4.436998 GCGAGGCCACTACAGCGT 62.437 66.667 5.01 0.00 0.00 5.07
694 2077 1.004918 AGGCCACTACAGCGTGTTC 60.005 57.895 5.01 0.00 33.07 3.18
779 2162 1.407437 GCCGTTTCCATCCTCTCATGT 60.407 52.381 0.00 0.00 0.00 3.21
814 2197 4.802051 CATCCCCACCGCACCCTG 62.802 72.222 0.00 0.00 0.00 4.45
819 2202 4.742201 CCACCGCACCCTGTCTCG 62.742 72.222 0.00 0.00 0.00 4.04
829 2212 1.984570 CCTGTCTCGCCTTCCTCCA 60.985 63.158 0.00 0.00 0.00 3.86
830 2213 1.216710 CTGTCTCGCCTTCCTCCAC 59.783 63.158 0.00 0.00 0.00 4.02
836 2226 2.276740 GCCTTCCTCCACATGGGG 59.723 66.667 8.05 8.05 37.22 4.96
839 2229 1.616921 CTTCCTCCACATGGGGCAT 59.383 57.895 9.95 0.00 37.22 4.40
895 2285 1.966451 CGCCACTTTCCCACCACTC 60.966 63.158 0.00 0.00 0.00 3.51
1044 2438 1.578206 GCAGCAACCTTCCTTCCGAC 61.578 60.000 0.00 0.00 0.00 4.79
1067 2465 4.444838 CCACCCGATCGTTCGCCA 62.445 66.667 15.09 0.00 44.12 5.69
1268 2671 2.034066 TTGCCCAGGAAGAAGCGG 59.966 61.111 0.00 0.00 0.00 5.52
1620 3023 4.271049 CGTTCAGGTGATTATTGCTACCAG 59.729 45.833 0.00 0.00 35.66 4.00
1622 3025 2.880890 CAGGTGATTATTGCTACCAGCC 59.119 50.000 0.00 0.00 41.51 4.85
1623 3026 2.158608 AGGTGATTATTGCTACCAGCCC 60.159 50.000 0.00 0.00 41.51 5.19
1624 3027 2.422803 GGTGATTATTGCTACCAGCCCA 60.423 50.000 0.00 0.00 41.51 5.36
1625 3028 2.618709 GTGATTATTGCTACCAGCCCAC 59.381 50.000 0.00 0.00 41.51 4.61
1626 3029 2.230660 GATTATTGCTACCAGCCCACC 58.769 52.381 0.00 0.00 41.51 4.61
1627 3030 0.995803 TTATTGCTACCAGCCCACCA 59.004 50.000 0.00 0.00 41.51 4.17
1628 3031 0.254747 TATTGCTACCAGCCCACCAC 59.745 55.000 0.00 0.00 41.51 4.16
1629 3032 2.499303 ATTGCTACCAGCCCACCACC 62.499 60.000 0.00 0.00 41.51 4.61
1630 3033 3.330720 GCTACCAGCCCACCACCT 61.331 66.667 0.00 0.00 34.48 4.00
1631 3034 2.907179 GCTACCAGCCCACCACCTT 61.907 63.158 0.00 0.00 34.48 3.50
1632 3035 1.002134 CTACCAGCCCACCACCTTG 60.002 63.158 0.00 0.00 0.00 3.61
1633 3036 1.772567 TACCAGCCCACCACCTTGT 60.773 57.895 0.00 0.00 0.00 3.16
1634 3037 0.474079 TACCAGCCCACCACCTTGTA 60.474 55.000 0.00 0.00 0.00 2.41
1635 3038 1.002134 CCAGCCCACCACCTTGTAG 60.002 63.158 0.00 0.00 0.00 2.74
1636 3039 1.761174 CAGCCCACCACCTTGTAGT 59.239 57.895 0.00 0.00 0.00 2.73
1637 3040 0.981183 CAGCCCACCACCTTGTAGTA 59.019 55.000 0.00 0.00 0.00 1.82
1638 3041 0.981943 AGCCCACCACCTTGTAGTAC 59.018 55.000 0.00 0.00 0.00 2.73
1645 3048 5.105595 CCCACCACCTTGTAGTACTAGTAAC 60.106 48.000 3.61 0.77 0.00 2.50
1674 3078 2.765250 TTTGCTGCCTCGTCTCGTCC 62.765 60.000 0.00 0.00 0.00 4.79
1679 3083 1.002251 CTGCCTCGTCTCGTCCTATTC 60.002 57.143 0.00 0.00 0.00 1.75
1742 3146 1.964608 CTGCCTACCTAGCTGCAGCA 61.965 60.000 38.24 23.25 43.96 4.41
1752 3156 0.886563 AGCTGCAGCAGAAATGGAAC 59.113 50.000 38.24 5.42 45.16 3.62
1753 3157 0.599558 GCTGCAGCAGAAATGGAACA 59.400 50.000 33.36 0.00 42.31 3.18
1816 3220 9.758651 AATACTGTTCAAAGTAAAATTCCAACC 57.241 29.630 0.00 0.00 36.28 3.77
1874 3278 1.917273 GTATGCGACGAAACTGCCTA 58.083 50.000 0.00 0.00 0.00 3.93
1875 3279 1.587034 GTATGCGACGAAACTGCCTAC 59.413 52.381 0.00 0.00 0.00 3.18
1877 3281 1.080025 GCGACGAAACTGCCTACCT 60.080 57.895 0.00 0.00 0.00 3.08
1990 3427 1.691434 GTGGAGGCAAAAATTCCCACA 59.309 47.619 0.00 0.00 42.50 4.17
1993 3430 3.244491 TGGAGGCAAAAATTCCCACAATG 60.244 43.478 0.00 0.00 0.00 2.82
2108 3685 6.939132 ATAGCAAGATGAAACTCAATCCAG 57.061 37.500 0.00 0.00 0.00 3.86
2159 3737 6.839124 ATTGTCTGTTGATCATTTGCCTAA 57.161 33.333 0.00 0.00 0.00 2.69
2168 3777 8.533657 TGTTGATCATTTGCCTAAGATGAAAAT 58.466 29.630 0.00 0.00 33.89 1.82
2187 3796 6.213195 TGAAAATTTCCATGAAACCCTGCTAT 59.787 34.615 3.00 0.00 34.23 2.97
2189 3798 7.732222 AAATTTCCATGAAACCCTGCTATAA 57.268 32.000 0.00 0.00 34.23 0.98
2190 3799 7.732222 AATTTCCATGAAACCCTGCTATAAA 57.268 32.000 0.00 0.00 34.23 1.40
2191 3800 7.732222 ATTTCCATGAAACCCTGCTATAAAA 57.268 32.000 0.00 0.00 34.23 1.52
2192 3801 7.732222 TTTCCATGAAACCCTGCTATAAAAT 57.268 32.000 0.00 0.00 0.00 1.82
2193 3802 8.830915 TTTCCATGAAACCCTGCTATAAAATA 57.169 30.769 0.00 0.00 0.00 1.40
2194 3803 9.432982 TTTCCATGAAACCCTGCTATAAAATAT 57.567 29.630 0.00 0.00 0.00 1.28
2202 3818 7.032598 ACCCTGCTATAAAATATAGTGGCAT 57.967 36.000 0.00 0.00 0.00 4.40
2252 3868 5.221521 TGGTGCATAAGCCATTAGAGTCTAG 60.222 44.000 0.00 0.00 41.13 2.43
2253 3869 5.221541 GGTGCATAAGCCATTAGAGTCTAGT 60.222 44.000 0.00 0.00 41.13 2.57
2255 3871 7.310113 GGTGCATAAGCCATTAGAGTCTAGTAT 60.310 40.741 0.00 0.00 41.13 2.12
2256 3872 7.757624 GTGCATAAGCCATTAGAGTCTAGTATC 59.242 40.741 0.00 0.00 41.13 2.24
2258 3874 8.188139 GCATAAGCCATTAGAGTCTAGTATCTC 58.812 40.741 0.00 4.16 33.58 2.75
2259 3875 9.461312 CATAAGCCATTAGAGTCTAGTATCTCT 57.539 37.037 15.01 15.01 42.62 3.10
2262 3878 9.869667 AAGCCATTAGAGTCTAGTATCTCTTAA 57.130 33.333 15.55 10.51 40.78 1.85
2284 3977 9.982291 CTTAATGTGTACGCATTACTATGTTTT 57.018 29.630 31.66 13.59 39.98 2.43
2351 4047 2.946990 TGATGAGCGTGTTAGGATACGA 59.053 45.455 0.00 0.00 42.18 3.43
2369 4065 8.085296 AGGATACGATCTAAACATTGATCTCAC 58.915 37.037 0.00 0.00 46.39 3.51
2485 4181 5.707242 TCTATCTGACAACGTCAAGAACT 57.293 39.130 0.00 0.00 42.26 3.01
2536 4232 2.163815 CCATCGGTTCTCTGTCTAACGT 59.836 50.000 0.00 0.00 0.00 3.99
2577 4273 1.963172 AAACACGTTGGGGAGAGTTC 58.037 50.000 0.00 0.00 0.00 3.01
2716 4412 1.508632 GCTTGTTACAGTCGGCAAGA 58.491 50.000 12.98 0.00 40.30 3.02
2728 4424 2.930682 GTCGGCAAGAAGATTCAGGTAC 59.069 50.000 0.00 0.00 0.00 3.34
2739 4435 6.995091 AGAAGATTCAGGTACCATGCTAAATC 59.005 38.462 15.94 13.18 0.00 2.17
2755 4454 7.350744 TGCTAAATCATGGCATACTTTTCAT 57.649 32.000 0.00 0.00 0.00 2.57
2757 4456 7.707464 TGCTAAATCATGGCATACTTTTCATTG 59.293 33.333 0.00 0.00 0.00 2.82
2814 4518 7.116075 AGTAAAATGCCTGTTCATAATGCAT 57.884 32.000 0.00 0.00 44.02 3.96
2825 4529 5.366186 TGTTCATAATGCATTATTTGGCCCT 59.634 36.000 25.93 4.33 30.91 5.19
2847 4551 6.407525 CCCTTTTCTGTCCTAATCCTCTGTAG 60.408 46.154 0.00 0.00 0.00 2.74
2849 4553 4.528076 TCTGTCCTAATCCTCTGTAGCT 57.472 45.455 0.00 0.00 0.00 3.32
2851 4555 4.167113 TCTGTCCTAATCCTCTGTAGCTCT 59.833 45.833 0.00 0.00 0.00 4.09
2872 4576 0.321387 AGTGTGGAGCATGAGCAGTG 60.321 55.000 0.00 0.00 45.49 3.66
2935 4639 4.757149 GCAGGATGTTCTGTACTTCTGTTT 59.243 41.667 0.00 0.00 39.31 2.83
2936 4640 5.239525 GCAGGATGTTCTGTACTTCTGTTTT 59.760 40.000 0.00 0.00 39.31 2.43
2980 4684 4.513442 ACAGTGTGTTTGCTCTGAACTTA 58.487 39.130 0.00 0.00 34.96 2.24
2982 4686 4.332543 CAGTGTGTTTGCTCTGAACTTACA 59.667 41.667 0.00 0.00 33.31 2.41
3151 4855 0.406750 TGACCGTCCTCCCAAGACTA 59.593 55.000 0.00 0.00 31.83 2.59
3198 4902 1.234821 CGCTGGTTCTGCTGGTTTTA 58.765 50.000 0.00 0.00 0.00 1.52
3219 4923 9.747293 GTTTTATACTACCTCTTCTGGTGATAC 57.253 37.037 0.00 0.00 41.05 2.24
3240 4944 2.933906 CGCTTATCCGTGCCTCTTTTTA 59.066 45.455 0.00 0.00 0.00 1.52
3341 5048 6.094048 CCGTTAATTGATCATGGAGAAACACT 59.906 38.462 0.00 0.00 0.00 3.55
3344 5051 3.708403 TGATCATGGAGAAACACTGCT 57.292 42.857 0.00 0.00 37.83 4.24
3466 5176 7.509546 ACTTTGTTCTTGACTCCTAATTGAGA 58.490 34.615 0.07 0.00 36.22 3.27
3614 5327 7.966339 ACCTTACTACTCCATTGTGTATGTA 57.034 36.000 0.00 0.00 31.99 2.29
3615 5328 7.779073 ACCTTACTACTCCATTGTGTATGTAC 58.221 38.462 0.00 0.00 31.99 2.90
3616 5329 7.618512 ACCTTACTACTCCATTGTGTATGTACT 59.381 37.037 0.00 0.00 31.99 2.73
3617 5330 8.136165 CCTTACTACTCCATTGTGTATGTACTC 58.864 40.741 0.00 0.00 31.99 2.59
3618 5331 6.466885 ACTACTCCATTGTGTATGTACTCC 57.533 41.667 0.00 0.00 31.99 3.85
3619 5332 4.755266 ACTCCATTGTGTATGTACTCCC 57.245 45.455 0.00 0.00 31.99 4.30
3620 5333 4.362677 ACTCCATTGTGTATGTACTCCCT 58.637 43.478 0.00 0.00 31.99 4.20
3621 5334 4.406003 ACTCCATTGTGTATGTACTCCCTC 59.594 45.833 0.00 0.00 31.99 4.30
3622 5335 3.709653 TCCATTGTGTATGTACTCCCTCC 59.290 47.826 0.00 0.00 31.99 4.30
3623 5336 3.492656 CCATTGTGTATGTACTCCCTCCG 60.493 52.174 0.00 0.00 31.99 4.63
3624 5337 2.519771 TGTGTATGTACTCCCTCCGT 57.480 50.000 0.00 0.00 0.00 4.69
3625 5338 2.811410 TGTGTATGTACTCCCTCCGTT 58.189 47.619 0.00 0.00 0.00 4.44
3626 5339 2.756760 TGTGTATGTACTCCCTCCGTTC 59.243 50.000 0.00 0.00 0.00 3.95
3627 5340 2.019249 TGTATGTACTCCCTCCGTTCG 58.981 52.381 0.00 0.00 0.00 3.95
3628 5341 1.336125 GTATGTACTCCCTCCGTTCGG 59.664 57.143 4.74 4.74 0.00 4.30
3629 5342 0.033796 ATGTACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55
3630 5343 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
3631 5344 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
3632 5345 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
3633 5346 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
3634 5347 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
3635 5348 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
3636 5349 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
3637 5350 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
3638 5351 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
3639 5352 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
3640 5353 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
3641 5354 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
3642 5355 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
3643 5356 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
3644 5357 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
3645 5358 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
3646 5359 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
3647 5360 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
3648 5361 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
3649 5362 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
3650 5363 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
3651 5364 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
3652 5365 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
3653 5366 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
3654 5367 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
3655 5368 4.504858 ACTTGTCTCGGAAATGGATGTAC 58.495 43.478 0.00 0.00 0.00 2.90
3656 5369 3.536956 TGTCTCGGAAATGGATGTACC 57.463 47.619 0.00 0.00 39.54 3.34
3657 5370 3.104512 TGTCTCGGAAATGGATGTACCT 58.895 45.455 0.00 0.00 39.86 3.08
3658 5371 4.283337 TGTCTCGGAAATGGATGTACCTA 58.717 43.478 0.00 0.00 39.86 3.08
3659 5372 4.341235 TGTCTCGGAAATGGATGTACCTAG 59.659 45.833 0.00 0.00 39.86 3.02
3660 5373 4.583489 GTCTCGGAAATGGATGTACCTAGA 59.417 45.833 0.00 0.00 39.86 2.43
3661 5374 5.068723 GTCTCGGAAATGGATGTACCTAGAA 59.931 44.000 0.00 0.00 39.86 2.10
3662 5375 5.068723 TCTCGGAAATGGATGTACCTAGAAC 59.931 44.000 0.00 0.00 39.86 3.01
3663 5376 4.960469 TCGGAAATGGATGTACCTAGAACT 59.040 41.667 0.00 0.00 39.86 3.01
3664 5377 6.131264 TCGGAAATGGATGTACCTAGAACTA 58.869 40.000 0.00 0.00 39.86 2.24
3665 5378 6.608405 TCGGAAATGGATGTACCTAGAACTAA 59.392 38.462 0.00 0.00 39.86 2.24
3666 5379 7.124599 TCGGAAATGGATGTACCTAGAACTAAA 59.875 37.037 0.00 0.00 39.86 1.85
3667 5380 7.767198 CGGAAATGGATGTACCTAGAACTAAAA 59.233 37.037 0.00 0.00 39.86 1.52
3668 5381 9.628500 GGAAATGGATGTACCTAGAACTAAAAT 57.372 33.333 0.00 0.00 39.86 1.82
3694 5407 8.637196 ACATCTAGATACATCCATTTCTACGA 57.363 34.615 4.54 0.00 0.00 3.43
3695 5408 8.516234 ACATCTAGATACATCCATTTCTACGAC 58.484 37.037 4.54 0.00 0.00 4.34
3696 5409 8.515414 CATCTAGATACATCCATTTCTACGACA 58.485 37.037 4.54 0.00 0.00 4.35
3697 5410 8.459911 TCTAGATACATCCATTTCTACGACAA 57.540 34.615 0.00 0.00 0.00 3.18
3698 5411 8.568794 TCTAGATACATCCATTTCTACGACAAG 58.431 37.037 0.00 0.00 0.00 3.16
3699 5412 7.113658 AGATACATCCATTTCTACGACAAGT 57.886 36.000 0.00 0.00 0.00 3.16
3700 5413 8.234136 AGATACATCCATTTCTACGACAAGTA 57.766 34.615 0.00 0.00 0.00 2.24
3701 5414 8.692710 AGATACATCCATTTCTACGACAAGTAA 58.307 33.333 0.00 0.00 34.45 2.24
3702 5415 9.477484 GATACATCCATTTCTACGACAAGTAAT 57.523 33.333 0.00 0.00 34.45 1.89
3703 5416 9.832445 ATACATCCATTTCTACGACAAGTAATT 57.168 29.630 0.00 0.00 34.45 1.40
3704 5417 8.197988 ACATCCATTTCTACGACAAGTAATTC 57.802 34.615 0.00 0.00 34.45 2.17
3705 5418 7.280205 ACATCCATTTCTACGACAAGTAATTCC 59.720 37.037 0.00 0.00 34.45 3.01
3706 5419 5.808540 TCCATTTCTACGACAAGTAATTCCG 59.191 40.000 0.00 0.00 34.45 4.30
3707 5420 5.808540 CCATTTCTACGACAAGTAATTCCGA 59.191 40.000 0.00 0.00 34.45 4.55
3708 5421 6.311935 CCATTTCTACGACAAGTAATTCCGAA 59.688 38.462 0.00 0.00 34.45 4.30
3709 5422 6.695292 TTTCTACGACAAGTAATTCCGAAC 57.305 37.500 0.00 0.00 34.45 3.95
3710 5423 4.406069 TCTACGACAAGTAATTCCGAACG 58.594 43.478 0.00 0.00 34.45 3.95
3711 5424 2.331194 ACGACAAGTAATTCCGAACGG 58.669 47.619 6.94 6.94 0.00 4.44
3712 5425 2.030007 ACGACAAGTAATTCCGAACGGA 60.030 45.455 12.04 12.04 43.52 4.69
3713 5426 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
3714 5427 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
3715 5428 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
3716 5429 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
3717 5430 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
3718 5431 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
3719 5432 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
3730 5443 2.959707 CGGAGGGAGTAGTAATCTTGCT 59.040 50.000 0.00 0.00 0.00 3.91
3781 5494 4.886496 AGTGTAAAACTGTACTCCCTCC 57.114 45.455 0.00 0.00 37.88 4.30
3782 5495 3.257624 AGTGTAAAACTGTACTCCCTCCG 59.742 47.826 0.00 0.00 37.88 4.63
3783 5496 3.006217 GTGTAAAACTGTACTCCCTCCGT 59.994 47.826 0.00 0.00 0.00 4.69
3784 5497 3.642848 TGTAAAACTGTACTCCCTCCGTT 59.357 43.478 0.00 0.00 0.00 4.44
3785 5498 3.397849 AAAACTGTACTCCCTCCGTTC 57.602 47.619 0.00 0.00 0.00 3.95
3786 5499 1.264295 AACTGTACTCCCTCCGTTCC 58.736 55.000 0.00 0.00 0.00 3.62
3787 5500 0.964358 ACTGTACTCCCTCCGTTCCG 60.964 60.000 0.00 0.00 0.00 4.30
3788 5501 0.679002 CTGTACTCCCTCCGTTCCGA 60.679 60.000 0.00 0.00 0.00 4.55
3789 5502 0.251297 TGTACTCCCTCCGTTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
3790 5503 0.890683 GTACTCCCTCCGTTCCGAAA 59.109 55.000 0.00 0.00 0.00 3.46
3791 5504 1.479730 GTACTCCCTCCGTTCCGAAAT 59.520 52.381 0.00 0.00 0.00 2.17
3792 5505 1.856629 ACTCCCTCCGTTCCGAAATA 58.143 50.000 0.00 0.00 0.00 1.40
3793 5506 2.395619 ACTCCCTCCGTTCCGAAATAT 58.604 47.619 0.00 0.00 0.00 1.28
3794 5507 3.569491 ACTCCCTCCGTTCCGAAATATA 58.431 45.455 0.00 0.00 0.00 0.86
3795 5508 3.962718 ACTCCCTCCGTTCCGAAATATAA 59.037 43.478 0.00 0.00 0.00 0.98
3796 5509 4.038883 ACTCCCTCCGTTCCGAAATATAAG 59.961 45.833 0.00 0.00 0.00 1.73
3797 5510 3.962718 TCCCTCCGTTCCGAAATATAAGT 59.037 43.478 0.00 0.00 0.00 2.24
3798 5511 4.038402 TCCCTCCGTTCCGAAATATAAGTC 59.962 45.833 0.00 0.00 0.00 3.01
3799 5512 4.038883 CCCTCCGTTCCGAAATATAAGTCT 59.961 45.833 0.00 0.00 0.00 3.24
3800 5513 5.452917 CCCTCCGTTCCGAAATATAAGTCTT 60.453 44.000 0.00 0.00 0.00 3.01
3801 5514 6.047231 CCTCCGTTCCGAAATATAAGTCTTT 58.953 40.000 0.00 0.00 0.00 2.52
3802 5515 6.537660 CCTCCGTTCCGAAATATAAGTCTTTT 59.462 38.462 0.00 0.00 0.00 2.27
3803 5516 7.065443 CCTCCGTTCCGAAATATAAGTCTTTTT 59.935 37.037 0.00 0.00 0.00 1.94
3827 5540 8.561738 TTTAGAGATTTCAAATGGACTACACC 57.438 34.615 0.00 0.00 0.00 4.16
3828 5541 6.126863 AGAGATTTCAAATGGACTACACCA 57.873 37.500 0.00 0.00 44.41 4.17
3840 5553 6.358974 TGGACTACACCATATGGATGTATG 57.641 41.667 28.77 21.86 38.94 2.39
3841 5554 5.843969 TGGACTACACCATATGGATGTATGT 59.156 40.000 28.77 24.03 38.94 2.29
3842 5555 7.013834 TGGACTACACCATATGGATGTATGTA 58.986 38.462 28.77 21.68 38.94 2.29
3843 5556 7.178451 TGGACTACACCATATGGATGTATGTAG 59.822 40.741 30.00 30.00 45.57 2.74
3844 5557 7.396339 GGACTACACCATATGGATGTATGTAGA 59.604 40.741 34.32 18.07 44.41 2.59
3845 5558 8.123639 ACTACACCATATGGATGTATGTAGAC 57.876 38.462 34.32 0.00 44.41 2.59
3846 5559 6.994421 ACACCATATGGATGTATGTAGACA 57.006 37.500 28.77 0.00 38.94 3.41
3847 5560 7.559335 ACACCATATGGATGTATGTAGACAT 57.441 36.000 28.77 0.08 42.82 3.06
3848 5561 8.664669 ACACCATATGGATGTATGTAGACATA 57.335 34.615 28.77 0.00 40.18 2.29
3849 5562 9.271921 ACACCATATGGATGTATGTAGACATAT 57.728 33.333 28.77 0.00 40.18 1.78
3878 5591 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3879 5592 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3880 5593 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3881 5594 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3882 5595 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3883 5596 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3884 5597 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
3885 5598 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3886 5599 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3887 5600 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3888 5601 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
3889 5602 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
3890 5603 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
3891 5604 5.670485 TCATTTTGCTCCGTATGTAGTCAT 58.330 37.500 0.00 0.00 38.00 3.06
3892 5605 6.112734 TCATTTTGCTCCGTATGTAGTCATT 58.887 36.000 0.00 0.00 35.70 2.57
3893 5606 6.597672 TCATTTTGCTCCGTATGTAGTCATTT 59.402 34.615 0.00 0.00 35.70 2.32
3894 5607 7.766738 TCATTTTGCTCCGTATGTAGTCATTTA 59.233 33.333 0.00 0.00 35.70 1.40
3895 5608 8.559536 CATTTTGCTCCGTATGTAGTCATTTAT 58.440 33.333 0.00 0.00 35.70 1.40
3896 5609 8.500753 TTTTGCTCCGTATGTAGTCATTTATT 57.499 30.769 0.00 0.00 35.70 1.40
3897 5610 7.477144 TTGCTCCGTATGTAGTCATTTATTG 57.523 36.000 0.00 0.00 35.70 1.90
3898 5611 6.811954 TGCTCCGTATGTAGTCATTTATTGA 58.188 36.000 0.00 0.00 35.70 2.57
3899 5612 7.269316 TGCTCCGTATGTAGTCATTTATTGAA 58.731 34.615 0.00 0.00 35.70 2.69
3900 5613 7.766738 TGCTCCGTATGTAGTCATTTATTGAAA 59.233 33.333 0.00 0.00 35.70 2.69
3901 5614 8.774586 GCTCCGTATGTAGTCATTTATTGAAAT 58.225 33.333 0.00 0.00 35.70 2.17
3932 5645 9.853177 AGAAAGACTTATATTTGGGAACATAGG 57.147 33.333 0.00 0.00 42.32 2.57
3933 5646 8.996651 AAAGACTTATATTTGGGAACATAGGG 57.003 34.615 0.00 0.00 42.32 3.53
3934 5647 7.947782 AGACTTATATTTGGGAACATAGGGA 57.052 36.000 0.00 0.00 42.32 4.20
4016 5729 1.339151 ACAACCGGCCTCTTCATCTTC 60.339 52.381 0.00 0.00 0.00 2.87
4020 5733 1.472376 CCGGCCTCTTCATCTTCTGAC 60.472 57.143 0.00 0.00 32.17 3.51
4029 5742 4.158579 TCTTCATCTTCTGACGCACATAGT 59.841 41.667 0.00 0.00 32.17 2.12
4176 5892 8.208903 AGTTTAACTTCTAAGACTAAGGCAACA 58.791 33.333 0.00 0.00 41.41 3.33
4180 5896 6.635755 ACTTCTAAGACTAAGGCAACATCTC 58.364 40.000 0.00 0.00 41.41 2.75
4183 5899 2.551270 AGACTAAGGCAACATCTCCCA 58.449 47.619 0.00 0.00 41.41 4.37
4184 5900 3.118531 AGACTAAGGCAACATCTCCCAT 58.881 45.455 0.00 0.00 41.41 4.00
4185 5901 3.118112 AGACTAAGGCAACATCTCCCATG 60.118 47.826 0.00 0.00 41.41 3.66
4205 5921 6.710744 CCCATGGTAAGGTTATACTTAAGCTG 59.289 42.308 11.73 0.00 43.55 4.24
4207 5923 7.773690 CCATGGTAAGGTTATACTTAAGCTGTT 59.226 37.037 2.57 0.00 43.55 3.16
4232 5948 6.092670 TGTTTCTTGTACATATTGCTCTCTGC 59.907 38.462 0.00 0.00 43.25 4.26
4240 5956 0.743701 ATTGCTCTCTGCTGCCTTCG 60.744 55.000 0.00 0.00 43.37 3.79
4329 6069 6.481643 CGATCCATAATAACTTAACCCCCAT 58.518 40.000 0.00 0.00 0.00 4.00
4334 6074 7.521468 TCCATAATAACTTAACCCCCATATCCA 59.479 37.037 0.00 0.00 0.00 3.41
4346 6086 6.932753 ACCCCCATATCCATTAATTCTTCAA 58.067 36.000 0.00 0.00 0.00 2.69
4441 6189 4.084223 GCTCAAACAATCCAACAAATGCAG 60.084 41.667 0.00 0.00 0.00 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.304686 TCAGTCTACTTGTTTCACCCAAT 57.695 39.130 0.00 0.00 0.00 3.16
1 2 4.764050 TCAGTCTACTTGTTTCACCCAA 57.236 40.909 0.00 0.00 0.00 4.12
25 26 9.766277 GTTTTCAAGCATGTTTAAATTTCAACA 57.234 25.926 17.72 17.72 37.31 3.33
26 27 9.986833 AGTTTTCAAGCATGTTTAAATTTCAAC 57.013 25.926 8.07 8.07 0.00 3.18
62 63 5.063564 CGCCAAGACCTTTAGAACAAGATAC 59.936 44.000 0.00 0.00 0.00 2.24
63 64 5.175859 CGCCAAGACCTTTAGAACAAGATA 58.824 41.667 0.00 0.00 0.00 1.98
78 79 3.386768 TGATAATCCTAGCGCCAAGAC 57.613 47.619 2.29 0.00 0.00 3.01
150 151 7.653311 GCCTTTTATTTTCTCTGTCACAATGTT 59.347 33.333 0.00 0.00 0.00 2.71
152 153 7.147312 TGCCTTTTATTTTCTCTGTCACAATG 58.853 34.615 0.00 0.00 0.00 2.82
169 170 8.849168 CATGGAGAAACACATATATGCCTTTTA 58.151 33.333 12.79 0.00 0.00 1.52
178 179 6.000246 TGAAGGCATGGAGAAACACATATA 58.000 37.500 0.00 0.00 0.00 0.86
180 181 4.299586 TGAAGGCATGGAGAAACACATA 57.700 40.909 0.00 0.00 0.00 2.29
183 184 3.498927 CATGAAGGCATGGAGAAACAC 57.501 47.619 0.00 0.00 46.45 3.32
206 207 2.221169 CCCTCTCTCATCTCTCTCACG 58.779 57.143 0.00 0.00 0.00 4.35
207 208 2.586425 CCCCTCTCTCATCTCTCTCAC 58.414 57.143 0.00 0.00 0.00 3.51
208 209 1.498576 CCCCCTCTCTCATCTCTCTCA 59.501 57.143 0.00 0.00 0.00 3.27
209 210 1.499007 ACCCCCTCTCTCATCTCTCTC 59.501 57.143 0.00 0.00 0.00 3.20
210 211 1.499007 GACCCCCTCTCTCATCTCTCT 59.501 57.143 0.00 0.00 0.00 3.10
211 212 1.817740 CGACCCCCTCTCTCATCTCTC 60.818 61.905 0.00 0.00 0.00 3.20
212 213 0.184933 CGACCCCCTCTCTCATCTCT 59.815 60.000 0.00 0.00 0.00 3.10
223 224 4.101448 GAGCATGCACGACCCCCT 62.101 66.667 21.98 0.00 0.00 4.79
227 228 2.754472 TGTATATGAGCATGCACGACC 58.246 47.619 21.98 3.87 0.00 4.79
230 231 4.737353 ATGTTGTATATGAGCATGCACG 57.263 40.909 21.98 0.00 0.00 5.34
231 232 5.391310 GCCTATGTTGTATATGAGCATGCAC 60.391 44.000 21.98 15.08 0.00 4.57
272 275 8.517878 CCCACCTTTCTGCATATATGATTTAAG 58.482 37.037 17.10 12.30 0.00 1.85
280 283 4.889409 CACAACCCACCTTTCTGCATATAT 59.111 41.667 0.00 0.00 0.00 0.86
299 303 7.280428 CGGAGAGAGTAGTAAGTAGATTCACAA 59.720 40.741 0.00 0.00 0.00 3.33
325 329 3.549070 ACGTGCGATAAGTAATTCGGAAC 59.451 43.478 0.00 0.00 37.44 3.62
326 330 3.772932 ACGTGCGATAAGTAATTCGGAA 58.227 40.909 0.00 0.00 37.44 4.30
327 331 3.425577 ACGTGCGATAAGTAATTCGGA 57.574 42.857 0.00 0.00 35.93 4.55
328 332 6.916401 TTATACGTGCGATAAGTAATTCGG 57.084 37.500 0.00 0.00 35.93 4.30
329 333 8.422457 ACATTTATACGTGCGATAAGTAATTCG 58.578 33.333 0.00 0.00 38.37 3.34
339 343 9.419297 ACATCTAAATACATTTATACGTGCGAT 57.581 29.630 0.00 0.00 32.36 4.58
340 344 8.806177 ACATCTAAATACATTTATACGTGCGA 57.194 30.769 0.00 0.00 32.36 5.10
368 372 8.736244 GCTGAAATGGGTGTATTTAGAACTAAA 58.264 33.333 9.03 9.03 39.12 1.85
369 373 7.065324 CGCTGAAATGGGTGTATTTAGAACTAA 59.935 37.037 0.00 0.00 30.78 2.24
370 374 6.537301 CGCTGAAATGGGTGTATTTAGAACTA 59.463 38.462 0.00 0.00 30.78 2.24
371 375 5.354234 CGCTGAAATGGGTGTATTTAGAACT 59.646 40.000 0.00 0.00 30.78 3.01
372 376 5.353123 TCGCTGAAATGGGTGTATTTAGAAC 59.647 40.000 0.00 0.00 30.78 3.01
373 377 5.492895 TCGCTGAAATGGGTGTATTTAGAA 58.507 37.500 0.00 0.00 30.78 2.10
374 378 5.092554 TCGCTGAAATGGGTGTATTTAGA 57.907 39.130 0.00 0.00 30.78 2.10
375 379 5.527214 TCATCGCTGAAATGGGTGTATTTAG 59.473 40.000 0.00 0.00 30.78 1.85
376 380 5.432645 TCATCGCTGAAATGGGTGTATTTA 58.567 37.500 0.00 0.00 30.78 1.40
377 381 4.269183 TCATCGCTGAAATGGGTGTATTT 58.731 39.130 0.00 0.00 33.19 1.40
378 382 3.879295 CTCATCGCTGAAATGGGTGTATT 59.121 43.478 0.00 0.00 0.00 1.89
379 383 3.118261 ACTCATCGCTGAAATGGGTGTAT 60.118 43.478 0.00 0.00 36.48 2.29
380 384 2.236146 ACTCATCGCTGAAATGGGTGTA 59.764 45.455 0.00 0.00 36.48 2.90
381 385 1.003580 ACTCATCGCTGAAATGGGTGT 59.996 47.619 0.00 0.00 36.48 4.16
382 386 1.742761 ACTCATCGCTGAAATGGGTG 58.257 50.000 0.00 0.00 36.48 4.61
383 387 3.627395 TTACTCATCGCTGAAATGGGT 57.373 42.857 0.00 0.00 40.82 4.51
384 388 5.276270 CAAATTACTCATCGCTGAAATGGG 58.724 41.667 0.00 0.00 0.00 4.00
385 389 5.066375 TCCAAATTACTCATCGCTGAAATGG 59.934 40.000 0.00 0.00 0.00 3.16
386 390 6.122850 TCCAAATTACTCATCGCTGAAATG 57.877 37.500 0.00 0.00 0.00 2.32
387 391 6.555315 GTTCCAAATTACTCATCGCTGAAAT 58.445 36.000 0.00 0.00 0.00 2.17
388 392 5.390461 CGTTCCAAATTACTCATCGCTGAAA 60.390 40.000 0.00 0.00 0.00 2.69
389 393 4.092821 CGTTCCAAATTACTCATCGCTGAA 59.907 41.667 0.00 0.00 0.00 3.02
390 394 3.616821 CGTTCCAAATTACTCATCGCTGA 59.383 43.478 0.00 0.00 0.00 4.26
391 395 3.242413 CCGTTCCAAATTACTCATCGCTG 60.242 47.826 0.00 0.00 0.00 5.18
392 396 2.936498 CCGTTCCAAATTACTCATCGCT 59.064 45.455 0.00 0.00 0.00 4.93
393 397 2.933906 TCCGTTCCAAATTACTCATCGC 59.066 45.455 0.00 0.00 0.00 4.58
394 398 3.555956 CCTCCGTTCCAAATTACTCATCG 59.444 47.826 0.00 0.00 0.00 3.84
395 399 3.877508 CCCTCCGTTCCAAATTACTCATC 59.122 47.826 0.00 0.00 0.00 2.92
396 400 3.521937 TCCCTCCGTTCCAAATTACTCAT 59.478 43.478 0.00 0.00 0.00 2.90
397 401 2.907696 TCCCTCCGTTCCAAATTACTCA 59.092 45.455 0.00 0.00 0.00 3.41
398 402 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
399 403 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
400 404 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
401 405 4.098894 AGTACTCCCTCCGTTCCAAATTA 58.901 43.478 0.00 0.00 0.00 1.40
402 406 2.910977 AGTACTCCCTCCGTTCCAAATT 59.089 45.455 0.00 0.00 0.00 1.82
403 407 2.547990 AGTACTCCCTCCGTTCCAAAT 58.452 47.619 0.00 0.00 0.00 2.32
404 408 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
405 409 2.019807 AAGTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
406 410 2.905415 TAAGTACTCCCTCCGTTCCA 57.095 50.000 0.00 0.00 0.00 3.53
407 411 5.221402 CCTTTATAAGTACTCCCTCCGTTCC 60.221 48.000 0.00 0.00 0.00 3.62
408 412 5.362143 ACCTTTATAAGTACTCCCTCCGTTC 59.638 44.000 0.00 0.00 0.00 3.95
409 413 5.275630 ACCTTTATAAGTACTCCCTCCGTT 58.724 41.667 0.00 0.00 0.00 4.44
410 414 4.876580 ACCTTTATAAGTACTCCCTCCGT 58.123 43.478 0.00 0.00 0.00 4.69
411 415 5.049129 CGTACCTTTATAAGTACTCCCTCCG 60.049 48.000 0.00 0.00 0.00 4.63
412 416 6.064717 TCGTACCTTTATAAGTACTCCCTCC 58.935 44.000 0.00 0.00 0.00 4.30
413 417 6.770303 ACTCGTACCTTTATAAGTACTCCCTC 59.230 42.308 0.00 0.00 0.00 4.30
414 418 6.667661 ACTCGTACCTTTATAAGTACTCCCT 58.332 40.000 0.00 0.00 0.00 4.20
415 419 6.951062 ACTCGTACCTTTATAAGTACTCCC 57.049 41.667 0.00 0.00 0.00 4.30
416 420 7.704047 CCAAACTCGTACCTTTATAAGTACTCC 59.296 40.741 0.00 0.00 0.00 3.85
417 421 8.246871 ACCAAACTCGTACCTTTATAAGTACTC 58.753 37.037 0.00 0.00 0.00 2.59
418 422 8.031277 CACCAAACTCGTACCTTTATAAGTACT 58.969 37.037 11.24 0.00 0.00 2.73
419 423 8.028938 TCACCAAACTCGTACCTTTATAAGTAC 58.971 37.037 5.38 5.38 0.00 2.73
420 424 8.121305 TCACCAAACTCGTACCTTTATAAGTA 57.879 34.615 0.00 0.00 0.00 2.24
421 425 6.996509 TCACCAAACTCGTACCTTTATAAGT 58.003 36.000 0.00 0.00 0.00 2.24
422 426 7.894376 TTCACCAAACTCGTACCTTTATAAG 57.106 36.000 0.00 0.00 0.00 1.73
423 427 7.550196 GGATTCACCAAACTCGTACCTTTATAA 59.450 37.037 0.00 0.00 38.79 0.98
424 428 7.043565 GGATTCACCAAACTCGTACCTTTATA 58.956 38.462 0.00 0.00 38.79 0.98
425 429 5.878669 GGATTCACCAAACTCGTACCTTTAT 59.121 40.000 0.00 0.00 38.79 1.40
442 446 7.231317 TGGATGGCTCTAATTATTTGGATTCAC 59.769 37.037 0.00 0.00 0.00 3.18
448 452 5.598005 TGGTTGGATGGCTCTAATTATTTGG 59.402 40.000 0.00 0.00 0.00 3.28
457 461 2.561209 TAGGTGGTTGGATGGCTCTA 57.439 50.000 0.00 0.00 0.00 2.43
458 462 1.898863 ATAGGTGGTTGGATGGCTCT 58.101 50.000 0.00 0.00 0.00 4.09
463 467 4.065088 CGTTGGATATAGGTGGTTGGATG 58.935 47.826 0.00 0.00 0.00 3.51
473 477 4.202161 ACAGCTTGAGACGTTGGATATAGG 60.202 45.833 0.00 0.00 0.00 2.57
484 488 6.834959 ACATCATTTATACAGCTTGAGACG 57.165 37.500 0.00 0.00 0.00 4.18
620 627 2.754946 TAACGGCGAGAAATCCACTT 57.245 45.000 16.62 0.00 0.00 3.16
633 640 1.433837 CGGCAAGGGTACATAACGGC 61.434 60.000 0.00 0.00 0.00 5.68
663 2022 1.302511 TGGCCTCGCTTCTGGAAAC 60.303 57.895 3.32 0.00 0.00 2.78
669 2028 1.893786 CTGTAGTGGCCTCGCTTCT 59.106 57.895 3.32 0.00 35.12 2.85
679 2062 3.856508 CGGAACACGCTGTAGTGG 58.143 61.111 9.46 0.00 45.80 4.00
690 2073 4.396478 TGAAAGTTGACAAATGACGGAACA 59.604 37.500 0.00 0.00 0.00 3.18
811 2194 1.984570 TGGAGGAAGGCGAGACAGG 60.985 63.158 0.00 0.00 0.00 4.00
814 2197 0.460987 CATGTGGAGGAAGGCGAGAC 60.461 60.000 0.00 0.00 0.00 3.36
819 2202 2.276740 CCCCATGTGGAGGAAGGC 59.723 66.667 0.00 0.00 37.39 4.35
836 2226 2.819984 TTTCGAGAGGGTGGCCATGC 62.820 60.000 9.72 0.00 0.00 4.06
839 2229 1.374947 CTTTTCGAGAGGGTGGCCA 59.625 57.895 0.00 0.00 0.00 5.36
852 2242 1.203313 CGACCGCCAACGACTTTTC 59.797 57.895 0.00 0.00 43.93 2.29
1044 2438 0.874607 GAACGATCGGGTGGGAATCG 60.875 60.000 20.98 2.72 40.21 3.34
1251 2654 2.034066 CCGCTTCTTCCTGGGCAA 59.966 61.111 0.00 0.00 0.00 4.52
1268 2671 4.772687 GGGGCCGGGAAGTCGAAC 62.773 72.222 2.18 0.00 0.00 3.95
1620 3023 0.981943 AGTACTACAAGGTGGTGGGC 59.018 55.000 0.00 0.00 0.00 5.36
1622 3025 5.713861 AGTTACTAGTACTACAAGGTGGTGG 59.286 44.000 0.91 0.00 0.00 4.61
1623 3026 6.830873 AGTTACTAGTACTACAAGGTGGTG 57.169 41.667 0.91 0.00 0.00 4.17
1624 3027 7.846101 AAAGTTACTAGTACTACAAGGTGGT 57.154 36.000 0.91 0.00 0.00 4.16
1625 3028 8.146412 ACAAAAGTTACTAGTACTACAAGGTGG 58.854 37.037 0.91 0.00 0.00 4.61
1626 3029 9.189723 GACAAAAGTTACTAGTACTACAAGGTG 57.810 37.037 0.91 0.38 0.00 4.00
1627 3030 9.140874 AGACAAAAGTTACTAGTACTACAAGGT 57.859 33.333 0.91 0.00 0.00 3.50
1628 3031 9.623350 GAGACAAAAGTTACTAGTACTACAAGG 57.377 37.037 0.91 0.00 0.00 3.61
1633 3036 9.688592 GCAAAGAGACAAAAGTTACTAGTACTA 57.311 33.333 0.91 1.89 0.00 1.82
1634 3037 8.422566 AGCAAAGAGACAAAAGTTACTAGTACT 58.577 33.333 0.91 0.00 0.00 2.73
1635 3038 8.488764 CAGCAAAGAGACAAAAGTTACTAGTAC 58.511 37.037 0.91 0.00 0.00 2.73
1636 3039 7.170998 GCAGCAAAGAGACAAAAGTTACTAGTA 59.829 37.037 0.00 0.00 0.00 1.82
1637 3040 6.017852 GCAGCAAAGAGACAAAAGTTACTAGT 60.018 38.462 0.00 0.00 0.00 2.57
1638 3041 6.366630 GCAGCAAAGAGACAAAAGTTACTAG 58.633 40.000 0.00 0.00 0.00 2.57
1645 3048 2.350197 CGAGGCAGCAAAGAGACAAAAG 60.350 50.000 0.00 0.00 0.00 2.27
1704 3108 1.005294 GTTTGGCAATGCGCACTGAG 61.005 55.000 24.89 9.46 45.17 3.35
1742 3146 8.414629 AAAAGAGCTCTAAATGTTCCATTTCT 57.585 30.769 18.59 0.00 0.00 2.52
1752 3156 4.789012 TGCCCAAAAAGAGCTCTAAATG 57.211 40.909 18.59 15.13 0.00 2.32
1753 3157 4.835056 ACTTGCCCAAAAAGAGCTCTAAAT 59.165 37.500 18.59 3.51 0.00 1.40
1764 3168 4.494091 TCAAATTCCACTTGCCCAAAAA 57.506 36.364 0.00 0.00 0.00 1.94
1816 3220 6.317857 TCGAAGCTCTGATCGACAATATATG 58.682 40.000 4.16 0.00 42.61 1.78
1859 3263 0.171903 TAGGTAGGCAGTTTCGTCGC 59.828 55.000 0.00 0.00 0.00 5.19
1872 3276 3.914426 AGAACCAATGCACCTAGGTAG 57.086 47.619 15.80 10.42 33.15 3.18
1874 3278 3.157087 CAAAGAACCAATGCACCTAGGT 58.843 45.455 9.21 9.21 35.47 3.08
1875 3279 2.094545 GCAAAGAACCAATGCACCTAGG 60.095 50.000 7.41 7.41 39.81 3.02
1877 3281 2.875296 AGCAAAGAACCAATGCACCTA 58.125 42.857 0.00 0.00 42.45 3.08
1966 3403 1.644509 GAATTTTTGCCTCCACCCCT 58.355 50.000 0.00 0.00 0.00 4.79
1993 3430 7.870445 TGCTTACTCCATTTTTCATACCAAAAC 59.130 33.333 0.00 0.00 0.00 2.43
2034 3489 5.407407 ACTCTTCGTTCTTATGATGGTGT 57.593 39.130 0.00 0.00 0.00 4.16
2035 3490 7.545965 ACTTTACTCTTCGTTCTTATGATGGTG 59.454 37.037 0.00 0.00 0.00 4.17
2038 3493 8.587950 GTCACTTTACTCTTCGTTCTTATGATG 58.412 37.037 0.00 0.00 0.00 3.07
2108 3685 5.182001 TCATTTCTGCAGAAGTTAAGGAAGC 59.818 40.000 27.02 0.00 35.21 3.86
2159 3737 6.704310 CAGGGTTTCATGGAAATTTTCATCT 58.296 36.000 9.13 0.00 33.97 2.90
2168 3777 7.732222 ATTTTATAGCAGGGTTTCATGGAAA 57.268 32.000 0.00 0.00 0.00 3.13
2189 3798 8.995027 TTTGGAGATTACATGCCACTATATTT 57.005 30.769 0.00 0.00 0.00 1.40
2190 3799 9.017509 CATTTGGAGATTACATGCCACTATATT 57.982 33.333 0.00 0.00 0.00 1.28
2191 3800 7.121759 GCATTTGGAGATTACATGCCACTATAT 59.878 37.037 0.00 0.00 35.24 0.86
2192 3801 6.430925 GCATTTGGAGATTACATGCCACTATA 59.569 38.462 0.00 0.00 35.24 1.31
2193 3802 5.242393 GCATTTGGAGATTACATGCCACTAT 59.758 40.000 0.00 0.00 35.24 2.12
2194 3803 4.580167 GCATTTGGAGATTACATGCCACTA 59.420 41.667 0.00 0.00 35.24 2.74
2202 3818 4.009675 GTCACCTGCATTTGGAGATTACA 58.990 43.478 0.10 0.00 35.31 2.41
2252 3868 8.798748 AGTAATGCGTACACATTAAGAGATAC 57.201 34.615 15.96 6.61 42.53 2.24
2255 3871 8.410912 ACATAGTAATGCGTACACATTAAGAGA 58.589 33.333 15.96 4.79 42.53 3.10
2256 3872 8.575565 ACATAGTAATGCGTACACATTAAGAG 57.424 34.615 15.96 10.03 42.53 2.85
2258 3874 9.982291 AAAACATAGTAATGCGTACACATTAAG 57.018 29.630 15.96 10.04 42.53 1.85
2259 3875 9.762062 CAAAACATAGTAATGCGTACACATTAA 57.238 29.630 15.96 4.60 42.53 1.40
2262 3878 6.093495 AGCAAAACATAGTAATGCGTACACAT 59.907 34.615 0.00 0.00 41.72 3.21
2263 3879 5.410132 AGCAAAACATAGTAATGCGTACACA 59.590 36.000 0.00 0.00 41.72 3.72
2264 3880 5.864986 AGCAAAACATAGTAATGCGTACAC 58.135 37.500 0.00 0.00 41.72 2.90
2265 3881 6.814644 AGTAGCAAAACATAGTAATGCGTACA 59.185 34.615 0.00 0.00 41.72 2.90
2351 4047 5.533903 GGGCATGTGAGATCAATGTTTAGAT 59.466 40.000 0.00 0.00 0.00 1.98
2369 4065 0.545171 AGGTCTCATGTCAGGGCATG 59.455 55.000 7.53 7.53 45.48 4.06
2485 4181 0.244994 GGCAGAGCAGAGTCTTTCGA 59.755 55.000 0.00 0.00 0.00 3.71
2536 4232 8.029522 TGTTTTCAACTTGTTGCAGTTATACAA 58.970 29.630 8.48 1.26 35.10 2.41
2716 4412 6.662755 TGATTTAGCATGGTACCTGAATCTT 58.337 36.000 19.89 0.00 35.97 2.40
2739 4435 6.198650 TCAGTCAATGAAAAGTATGCCATG 57.801 37.500 0.00 0.00 34.02 3.66
2755 4454 6.530120 TGAGCTTATTAACAGGTTCAGTCAA 58.470 36.000 0.00 0.00 0.00 3.18
2757 4456 7.435068 TTTGAGCTTATTAACAGGTTCAGTC 57.565 36.000 0.00 0.00 0.00 3.51
2814 4518 4.126520 AGGACAGAAAAGGGCCAAATAA 57.873 40.909 6.18 0.00 0.00 1.40
2818 4522 3.563479 GGATTAGGACAGAAAAGGGCCAA 60.563 47.826 6.18 0.00 0.00 4.52
2825 4529 5.721960 AGCTACAGAGGATTAGGACAGAAAA 59.278 40.000 0.00 0.00 0.00 2.29
2849 4553 1.901833 TGCTCATGCTCCACACTTAGA 59.098 47.619 0.00 0.00 40.48 2.10
2851 4555 1.625315 ACTGCTCATGCTCCACACTTA 59.375 47.619 0.00 0.00 40.48 2.24
2872 4576 1.437625 GAAGCTGTTCAGAGCAGACC 58.562 55.000 17.95 1.40 41.83 3.85
2916 4620 6.619801 ACCAAAACAGAAGTACAGAACATC 57.380 37.500 0.00 0.00 0.00 3.06
2953 4657 4.309933 TCAGAGCAAACACACTGTCATAG 58.690 43.478 0.00 0.00 0.00 2.23
2980 4684 1.272648 CCCATTGGACCATTCCTGTGT 60.273 52.381 3.62 0.00 43.31 3.72
2982 4686 0.336048 CCCCATTGGACCATTCCTGT 59.664 55.000 3.62 0.00 43.31 4.00
3151 4855 4.682021 AAATCTGGTCCCTCAAAGGAAT 57.318 40.909 0.00 0.00 37.67 3.01
3198 4902 4.519730 GCGTATCACCAGAAGAGGTAGTAT 59.480 45.833 0.00 0.00 40.77 2.12
3219 4923 1.369625 AAAAGAGGCACGGATAAGCG 58.630 50.000 0.00 0.00 0.00 4.68
3341 5048 3.399105 ATAACCGCCATCCGCAGCA 62.399 57.895 0.00 0.00 37.30 4.41
3344 5051 2.203139 CCATAACCGCCATCCGCA 60.203 61.111 0.00 0.00 37.30 5.69
3357 5064 1.906105 GACTCAACCCACCCGCCATA 61.906 60.000 0.00 0.00 0.00 2.74
3571 5282 5.184892 AGGTACAAAGGAATGCTTCTCAT 57.815 39.130 0.00 0.00 36.87 2.90
3614 5327 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
3615 5328 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
3616 5329 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
3617 5330 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
3618 5331 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
3619 5332 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
3620 5333 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
3621 5334 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
3622 5335 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
3623 5336 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
3624 5337 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
3625 5338 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
3626 5339 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
3627 5340 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
3628 5341 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
3629 5342 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
3630 5343 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
3631 5344 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
3632 5345 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
3633 5346 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
3634 5347 3.871594 GGTACATCCATTTCCGAGACAAG 59.128 47.826 0.00 0.00 35.97 3.16
3635 5348 3.517901 AGGTACATCCATTTCCGAGACAA 59.482 43.478 0.00 0.00 39.02 3.18
3636 5349 3.104512 AGGTACATCCATTTCCGAGACA 58.895 45.455 0.00 0.00 39.02 3.41
3637 5350 3.821421 AGGTACATCCATTTCCGAGAC 57.179 47.619 0.00 0.00 39.02 3.36
3638 5351 4.800023 TCTAGGTACATCCATTTCCGAGA 58.200 43.478 0.00 0.00 39.02 4.04
3639 5352 5.069251 AGTTCTAGGTACATCCATTTCCGAG 59.931 44.000 0.00 0.00 39.02 4.63
3640 5353 4.960469 AGTTCTAGGTACATCCATTTCCGA 59.040 41.667 0.00 0.00 39.02 4.55
3641 5354 5.277857 AGTTCTAGGTACATCCATTTCCG 57.722 43.478 0.00 0.00 39.02 4.30
3642 5355 9.628500 ATTTTAGTTCTAGGTACATCCATTTCC 57.372 33.333 0.00 0.00 39.02 3.13
3668 5381 9.734984 TCGTAGAAATGGATGTATCTAGATGTA 57.265 33.333 15.79 4.44 0.00 2.29
3669 5382 8.516234 GTCGTAGAAATGGATGTATCTAGATGT 58.484 37.037 15.79 1.25 39.69 3.06
3670 5383 8.515414 TGTCGTAGAAATGGATGTATCTAGATG 58.485 37.037 15.79 0.00 39.69 2.90
3671 5384 8.637196 TGTCGTAGAAATGGATGTATCTAGAT 57.363 34.615 10.73 10.73 39.69 1.98
3672 5385 8.459911 TTGTCGTAGAAATGGATGTATCTAGA 57.540 34.615 0.00 0.00 39.69 2.43
3673 5386 8.353684 ACTTGTCGTAGAAATGGATGTATCTAG 58.646 37.037 0.00 0.00 39.69 2.43
3674 5387 8.234136 ACTTGTCGTAGAAATGGATGTATCTA 57.766 34.615 0.00 0.00 39.69 1.98
3675 5388 7.113658 ACTTGTCGTAGAAATGGATGTATCT 57.886 36.000 0.00 0.00 39.69 1.98
3676 5389 8.867112 TTACTTGTCGTAGAAATGGATGTATC 57.133 34.615 0.00 0.00 39.69 2.24
3677 5390 9.832445 AATTACTTGTCGTAGAAATGGATGTAT 57.168 29.630 0.00 0.00 39.69 2.29
3678 5391 9.309516 GAATTACTTGTCGTAGAAATGGATGTA 57.690 33.333 0.00 0.00 39.69 2.29
3679 5392 7.280205 GGAATTACTTGTCGTAGAAATGGATGT 59.720 37.037 0.00 0.00 39.69 3.06
3680 5393 7.516785 CGGAATTACTTGTCGTAGAAATGGATG 60.517 40.741 0.00 0.00 39.69 3.51
3681 5394 6.479001 CGGAATTACTTGTCGTAGAAATGGAT 59.521 38.462 0.00 0.00 39.69 3.41
3682 5395 5.808540 CGGAATTACTTGTCGTAGAAATGGA 59.191 40.000 0.00 0.00 39.69 3.41
3683 5396 5.808540 TCGGAATTACTTGTCGTAGAAATGG 59.191 40.000 0.00 0.00 39.69 3.16
3684 5397 6.880822 TCGGAATTACTTGTCGTAGAAATG 57.119 37.500 0.00 0.00 39.69 2.32
3685 5398 6.034256 CGTTCGGAATTACTTGTCGTAGAAAT 59.966 38.462 0.00 0.00 39.69 2.17
3686 5399 5.343058 CGTTCGGAATTACTTGTCGTAGAAA 59.657 40.000 0.00 0.00 39.69 2.52
3687 5400 4.853196 CGTTCGGAATTACTTGTCGTAGAA 59.147 41.667 0.00 0.00 39.69 2.10
3688 5401 4.406069 CGTTCGGAATTACTTGTCGTAGA 58.594 43.478 0.00 0.00 0.00 2.59
3689 5402 3.545078 CCGTTCGGAATTACTTGTCGTAG 59.455 47.826 5.19 0.00 0.00 3.51
3690 5403 3.190327 TCCGTTCGGAATTACTTGTCGTA 59.810 43.478 11.66 0.00 0.00 3.43
3691 5404 2.030007 TCCGTTCGGAATTACTTGTCGT 60.030 45.455 11.66 0.00 0.00 4.34
3692 5405 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
3693 5406 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
3694 5407 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
3695 5408 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
3696 5409 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
3697 5410 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
3698 5411 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
3699 5412 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
3700 5413 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
3701 5414 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
3702 5415 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
3703 5416 0.911769 TACTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
3704 5417 1.755179 TTACTACTCCCTCCGTTCGG 58.245 55.000 4.74 4.74 0.00 4.30
3705 5418 3.212685 AGATTACTACTCCCTCCGTTCG 58.787 50.000 0.00 0.00 0.00 3.95
3706 5419 4.737055 GCAAGATTACTACTCCCTCCGTTC 60.737 50.000 0.00 0.00 0.00 3.95
3707 5420 3.132467 GCAAGATTACTACTCCCTCCGTT 59.868 47.826 0.00 0.00 0.00 4.44
3708 5421 2.694109 GCAAGATTACTACTCCCTCCGT 59.306 50.000 0.00 0.00 0.00 4.69
3709 5422 2.959707 AGCAAGATTACTACTCCCTCCG 59.040 50.000 0.00 0.00 0.00 4.63
3710 5423 5.360649 AAAGCAAGATTACTACTCCCTCC 57.639 43.478 0.00 0.00 0.00 4.30
3711 5424 5.044558 CGAAAGCAAGATTACTACTCCCTC 58.955 45.833 0.00 0.00 0.00 4.30
3712 5425 4.710375 TCGAAAGCAAGATTACTACTCCCT 59.290 41.667 0.00 0.00 0.00 4.20
3713 5426 5.007385 TCGAAAGCAAGATTACTACTCCC 57.993 43.478 0.00 0.00 0.00 4.30
3801 5514 9.010029 GGTGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 0.00 1.52
3802 5515 8.160765 TGGTGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 31.96 1.85
3803 5516 7.685481 TGGTGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 31.96 2.10
3804 5517 7.252612 TGGTGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 31.96 2.43
3805 5518 6.126863 TGGTGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 31.96 3.10
3806 5519 8.562892 CATATGGTGTAGTCCATTTGAAATCTC 58.437 37.037 9.41 0.00 44.75 2.75
3807 5520 7.503566 CCATATGGTGTAGTCCATTTGAAATCT 59.496 37.037 14.09 0.00 44.75 2.40
3808 5521 7.502226 TCCATATGGTGTAGTCCATTTGAAATC 59.498 37.037 21.28 0.00 44.75 2.17
3809 5522 7.353525 TCCATATGGTGTAGTCCATTTGAAAT 58.646 34.615 21.28 0.00 44.75 2.17
3810 5523 6.726379 TCCATATGGTGTAGTCCATTTGAAA 58.274 36.000 21.28 0.00 44.75 2.69
3811 5524 6.320434 TCCATATGGTGTAGTCCATTTGAA 57.680 37.500 21.28 0.00 44.75 2.69
3812 5525 5.966853 TCCATATGGTGTAGTCCATTTGA 57.033 39.130 21.28 0.00 44.75 2.69
3813 5526 6.064060 ACATCCATATGGTGTAGTCCATTTG 58.936 40.000 21.28 6.40 44.75 2.32
3814 5527 6.266131 ACATCCATATGGTGTAGTCCATTT 57.734 37.500 21.28 0.00 44.75 2.32
3815 5528 5.912149 ACATCCATATGGTGTAGTCCATT 57.088 39.130 21.28 0.00 44.75 3.16
3817 5530 5.843969 ACATACATCCATATGGTGTAGTCCA 59.156 40.000 26.76 15.46 42.01 4.02
3818 5531 6.360370 ACATACATCCATATGGTGTAGTCC 57.640 41.667 26.76 0.00 36.95 3.85
3819 5532 8.244802 GTCTACATACATCCATATGGTGTAGTC 58.755 40.741 30.04 25.28 45.27 2.59
3820 5533 7.728532 TGTCTACATACATCCATATGGTGTAGT 59.271 37.037 30.04 26.22 45.27 2.73
3821 5534 8.122472 TGTCTACATACATCCATATGGTGTAG 57.878 38.462 27.92 27.92 45.74 2.74
3822 5535 8.664669 ATGTCTACATACATCCATATGGTGTA 57.335 34.615 25.91 25.91 35.08 2.90
3823 5536 6.994421 TGTCTACATACATCCATATGGTGT 57.006 37.500 24.15 24.15 38.66 4.16
3856 5569 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
3857 5570 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3858 5571 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
3859 5572 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3860 5573 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3861 5574 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3862 5575 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3863 5576 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3864 5577 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3865 5578 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
3866 5579 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
3867 5580 5.109210 TGACTACATACGGAGCAAAATGAG 58.891 41.667 0.00 0.00 0.00 2.90
3868 5581 5.079689 TGACTACATACGGAGCAAAATGA 57.920 39.130 0.00 0.00 0.00 2.57
3869 5582 5.991328 ATGACTACATACGGAGCAAAATG 57.009 39.130 0.00 0.00 34.71 2.32
3870 5583 8.677148 ATAAATGACTACATACGGAGCAAAAT 57.323 30.769 0.00 0.00 35.50 1.82
3871 5584 8.394877 CAATAAATGACTACATACGGAGCAAAA 58.605 33.333 0.00 0.00 35.50 2.44
3872 5585 7.766738 TCAATAAATGACTACATACGGAGCAAA 59.233 33.333 0.00 0.00 35.50 3.68
3873 5586 7.269316 TCAATAAATGACTACATACGGAGCAA 58.731 34.615 0.00 0.00 35.50 3.91
3874 5587 6.811954 TCAATAAATGACTACATACGGAGCA 58.188 36.000 0.00 0.00 35.50 4.26
3875 5588 7.709269 TTCAATAAATGACTACATACGGAGC 57.291 36.000 0.00 0.00 37.92 4.70
3906 5619 9.853177 CCTATGTTCCCAAATATAAGTCTTTCT 57.147 33.333 0.00 0.00 0.00 2.52
3907 5620 9.067986 CCCTATGTTCCCAAATATAAGTCTTTC 57.932 37.037 0.00 0.00 0.00 2.62
3908 5621 8.787818 TCCCTATGTTCCCAAATATAAGTCTTT 58.212 33.333 0.00 0.00 0.00 2.52
3909 5622 8.344939 TCCCTATGTTCCCAAATATAAGTCTT 57.655 34.615 0.00 0.00 0.00 3.01
3910 5623 7.572861 ACTCCCTATGTTCCCAAATATAAGTCT 59.427 37.037 0.00 0.00 0.00 3.24
3911 5624 7.746703 ACTCCCTATGTTCCCAAATATAAGTC 58.253 38.462 0.00 0.00 0.00 3.01
3912 5625 7.707467 ACTCCCTATGTTCCCAAATATAAGT 57.293 36.000 0.00 0.00 0.00 2.24
3913 5626 8.656806 TGTACTCCCTATGTTCCCAAATATAAG 58.343 37.037 0.00 0.00 0.00 1.73
3914 5627 8.570038 TGTACTCCCTATGTTCCCAAATATAA 57.430 34.615 0.00 0.00 0.00 0.98
3915 5628 8.751215 ATGTACTCCCTATGTTCCCAAATATA 57.249 34.615 0.00 0.00 0.00 0.86
3916 5629 7.648177 ATGTACTCCCTATGTTCCCAAATAT 57.352 36.000 0.00 0.00 0.00 1.28
3917 5630 7.092174 ACAATGTACTCCCTATGTTCCCAAATA 60.092 37.037 0.00 0.00 0.00 1.40
3918 5631 5.994416 ATGTACTCCCTATGTTCCCAAAT 57.006 39.130 0.00 0.00 0.00 2.32
3919 5632 5.014755 ACAATGTACTCCCTATGTTCCCAAA 59.985 40.000 0.00 0.00 0.00 3.28
3920 5633 4.538490 ACAATGTACTCCCTATGTTCCCAA 59.462 41.667 0.00 0.00 0.00 4.12
3921 5634 4.108570 ACAATGTACTCCCTATGTTCCCA 58.891 43.478 0.00 0.00 0.00 4.37
3922 5635 4.772886 ACAATGTACTCCCTATGTTCCC 57.227 45.455 0.00 0.00 0.00 3.97
3923 5636 6.127140 ACAGTACAATGTACTCCCTATGTTCC 60.127 42.308 21.91 0.00 0.00 3.62
3924 5637 6.875076 ACAGTACAATGTACTCCCTATGTTC 58.125 40.000 21.91 0.00 0.00 3.18
3925 5638 6.869206 ACAGTACAATGTACTCCCTATGTT 57.131 37.500 21.91 0.00 0.00 2.71
3984 5697 2.223745 GCCGGTTGTTTCAACCTTCTA 58.776 47.619 23.27 0.00 38.15 2.10
4016 5729 8.352752 TCAATAAAGATAACTATGTGCGTCAG 57.647 34.615 0.00 0.00 0.00 3.51
4119 5835 9.081204 TCTTGTAATGGTTCTGTAGTACTTGTA 57.919 33.333 0.00 0.00 0.00 2.41
4128 5844 8.918202 AACTCAAATCTTGTAATGGTTCTGTA 57.082 30.769 0.00 0.00 0.00 2.74
4176 5892 8.808240 TTAAGTATAACCTTACCATGGGAGAT 57.192 34.615 18.09 8.45 0.00 2.75
4180 5896 6.710744 CAGCTTAAGTATAACCTTACCATGGG 59.289 42.308 18.09 0.00 0.00 4.00
4183 5899 8.326529 ACAACAGCTTAAGTATAACCTTACCAT 58.673 33.333 4.02 0.00 0.00 3.55
4184 5900 7.682628 ACAACAGCTTAAGTATAACCTTACCA 58.317 34.615 4.02 0.00 0.00 3.25
4185 5901 8.557592 AACAACAGCTTAAGTATAACCTTACC 57.442 34.615 4.02 0.00 0.00 2.85
4205 5921 7.959651 CAGAGAGCAATATGTACAAGAAACAAC 59.040 37.037 0.00 0.00 0.00 3.32
4207 5923 6.092670 GCAGAGAGCAATATGTACAAGAAACA 59.907 38.462 0.00 0.00 44.79 2.83
4240 5956 4.488126 TGTTTCAAGTGATAGCAAGTGC 57.512 40.909 0.00 0.00 42.49 4.40
4399 6146 3.869065 AGCAAGCATTTGGATCAATTGG 58.131 40.909 5.42 0.00 34.79 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.