Multiple sequence alignment - TraesCS3B01G375500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G375500 chr3B 100.000 2599 0 0 1 2599 590290645 590293243 0.000000e+00 4800
1 TraesCS3B01G375500 chr3B 100.000 2143 0 0 2788 4930 590293432 590295574 0.000000e+00 3958
2 TraesCS3B01G375500 chr3B 87.537 337 36 5 2834 3165 590292908 590293243 7.740000e-103 385
3 TraesCS3B01G375500 chr3B 87.537 337 36 5 2264 2599 590293478 590293809 7.740000e-103 385
4 TraesCS3B01G375500 chr3B 89.243 251 21 5 2350 2599 590293432 590293677 4.790000e-80 309
5 TraesCS3B01G375500 chr3A 91.017 2616 169 41 4 2599 591576119 591578688 0.000000e+00 3469
6 TraesCS3B01G375500 chr3A 93.326 1918 65 22 2788 4656 591578705 591580608 0.000000e+00 2774
7 TraesCS3B01G375500 chr3A 89.630 405 32 7 2788 3184 591578438 591578840 1.580000e-139 507
8 TraesCS3B01G375500 chr3A 88.670 406 35 10 2788 3185 591578572 591578974 7.420000e-133 484
9 TraesCS3B01G375500 chr3A 89.645 338 31 4 2264 2599 591578486 591578821 1.270000e-115 427
10 TraesCS3B01G375500 chr3A 87.845 362 37 6 2834 3189 591578352 591578712 7.630000e-113 418
11 TraesCS3B01G375500 chr3A 88.855 332 33 4 2264 2593 591578619 591578948 5.940000e-109 405
12 TraesCS3B01G375500 chr3A 86.982 338 38 5 2264 2599 591578753 591579086 4.660000e-100 375
13 TraesCS3B01G375500 chr3A 89.474 266 19 7 2794 3053 591578844 591579106 1.320000e-85 327
14 TraesCS3B01G375500 chr3A 86.463 229 25 3 2966 3189 591578352 591578579 3.810000e-61 246
15 TraesCS3B01G375500 chr3A 91.200 125 10 1 2799 2922 591578982 591579106 8.490000e-38 169
16 TraesCS3B01G375500 chr3D 90.951 1304 82 17 1316 2599 449113791 449115078 0.000000e+00 1722
17 TraesCS3B01G375500 chr3D 96.382 995 33 2 3258 4251 449115539 449116531 0.000000e+00 1635
18 TraesCS3B01G375500 chr3D 88.796 1321 80 24 6 1301 449112547 449113824 0.000000e+00 1557
19 TraesCS3B01G375500 chr3D 88.366 361 36 5 2834 3189 449114743 449115102 3.530000e-116 429
20 TraesCS3B01G375500 chr3D 91.481 270 15 7 2973 3238 449115282 449115547 1.010000e-96 364
21 TraesCS3B01G375500 chr3D 88.814 295 27 5 2788 3077 449114829 449115122 1.690000e-94 357
22 TraesCS3B01G375500 chr3D 86.286 350 19 6 4333 4656 449116663 449117009 2.180000e-93 353
23 TraesCS3B01G375500 chr3D 89.879 247 24 1 2264 2509 449114876 449115122 2.860000e-82 316
24 TraesCS3B01G375500 chr3D 91.133 203 18 0 2397 2599 449114743 449114945 4.860000e-70 276
25 TraesCS3B01G375500 chr3D 95.266 169 8 0 4762 4930 126248677 126248509 8.130000e-68 268
26 TraesCS3B01G375500 chr3D 88.426 216 24 1 2277 2492 449115288 449115502 4.900000e-65 259
27 TraesCS3B01G375500 chr3D 94.545 165 9 0 4766 4930 519066628 519066792 6.330000e-64 255
28 TraesCS3B01G375500 chr3D 93.491 169 11 0 4762 4930 126290363 126290195 8.190000e-63 252
29 TraesCS3B01G375500 chr6D 94.706 170 9 0 4761 4930 147257698 147257529 1.050000e-66 265
30 TraesCS3B01G375500 chr6D 92.135 178 14 0 4753 4930 451802341 451802164 8.190000e-63 252
31 TraesCS3B01G375500 chr6B 94.643 168 9 0 4763 4930 117496057 117496224 1.360000e-65 261
32 TraesCS3B01G375500 chr1D 94.152 171 9 1 4760 4930 203255822 203255991 4.900000e-65 259
33 TraesCS3B01G375500 chr2D 94.048 168 10 0 4763 4930 9620573 9620406 6.330000e-64 255
34 TraesCS3B01G375500 chr2D 95.062 162 7 1 4769 4930 638866859 638866699 2.280000e-63 254


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G375500 chr3B 590290645 590295574 4929 False 1967.400000 4800 92.863400 1 4930 5 chr3B.!!$F1 4929
1 TraesCS3B01G375500 chr3A 591576119 591580608 4489 False 872.818182 3469 89.373364 4 4656 11 chr3A.!!$F1 4652
2 TraesCS3B01G375500 chr3D 449112547 449117009 4462 False 726.800000 1722 90.051400 6 4656 10 chr3D.!!$F2 4650

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
664 709 0.250727 TGGCCCAAAGCACACTACTC 60.251 55.0 0.00 0.0 46.50 2.59 F
1350 1404 0.464013 ACGACGATGACGAGGAGGAT 60.464 55.0 0.00 0.0 42.66 3.24 F
2246 2342 0.621082 AGTAGGCCTTCTTTCCAGCC 59.379 55.0 12.58 0.0 46.13 4.85 F
3004 3236 1.377536 GCTGTTTCTGAGGATGAGCC 58.622 55.0 0.00 0.0 0.00 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2306 2403 0.391130 TGTGCAACATAGGACGAGCC 60.391 55.000 0.00 0.0 45.67 4.70 R
3212 3446 1.222113 GCTTCTCACCAGTAGCCCC 59.778 63.158 0.00 0.0 37.13 5.80 R
3794 4037 0.249784 CCTCACCATCCTCAGCATCG 60.250 60.000 0.00 0.0 0.00 3.84 R
4774 5094 0.028902 GAACTGTTCACCACGGCAAC 59.971 55.000 15.34 0.0 34.68 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.335594 GGTTAACCCATTAGCTAGCACAAG 59.664 45.833 18.83 3.86 0.00 3.16
30 31 1.212935 ACCCATTAGCTAGCACAAGGG 59.787 52.381 24.99 24.99 40.88 3.95
33 34 2.368439 CATTAGCTAGCACAAGGGCAA 58.632 47.619 18.83 0.00 35.83 4.52
42 43 0.738389 CACAAGGGCAAGTTTCGTGT 59.262 50.000 0.00 0.00 0.00 4.49
44 45 1.944709 ACAAGGGCAAGTTTCGTGTAC 59.055 47.619 0.00 0.00 0.00 2.90
45 46 1.944024 CAAGGGCAAGTTTCGTGTACA 59.056 47.619 0.00 0.00 0.00 2.90
118 119 9.826574 AGGGTTTTTAATGTTAGGTTTCTTTTC 57.173 29.630 0.00 0.00 0.00 2.29
260 301 8.807948 TTTTTGTTTCAAATTTTACCCATGGA 57.192 26.923 15.22 0.00 0.00 3.41
261 302 8.807948 TTTTGTTTCAAATTTTACCCATGGAA 57.192 26.923 15.22 0.00 0.00 3.53
262 303 8.986929 TTTGTTTCAAATTTTACCCATGGAAT 57.013 26.923 15.22 1.33 0.00 3.01
277 318 7.801104 ACCCATGGAATATTCAAATTTTACCC 58.199 34.615 15.22 0.00 0.00 3.69
278 319 7.404396 ACCCATGGAATATTCAAATTTTACCCA 59.596 33.333 15.22 3.00 0.00 4.51
279 320 8.439172 CCCATGGAATATTCAAATTTTACCCAT 58.561 33.333 15.22 5.17 0.00 4.00
280 321 9.275398 CCATGGAATATTCAAATTTTACCCATG 57.725 33.333 17.07 15.38 43.98 3.66
281 322 9.275398 CATGGAATATTCAAATTTTACCCATGG 57.725 33.333 17.07 4.14 41.93 3.66
424 466 4.151157 GTGGTCAAAATCTTCAATTGCTGC 59.849 41.667 0.00 0.00 0.00 5.25
445 487 8.838365 TGCTGCTCACAATTTCAAAATTTATTT 58.162 25.926 0.00 0.00 36.52 1.40
527 570 9.919348 ATGTTCAGAATTTCAAAATTTTGTTCG 57.081 25.926 25.98 17.98 39.86 3.95
566 609 2.091541 GGGACTTGCGATGGAATTTCA 58.908 47.619 0.00 0.00 0.00 2.69
575 618 4.142116 TGCGATGGAATTTCATTTGCTGAT 60.142 37.500 19.69 0.00 32.72 2.90
589 632 4.519540 TTGCTGATTGGGCTAACTTTTC 57.480 40.909 0.00 0.00 0.00 2.29
600 645 4.379082 GGGCTAACTTTTCGTTACATGTGG 60.379 45.833 9.11 0.00 37.05 4.17
662 707 1.036707 TTTGGCCCAAAGCACACTAC 58.963 50.000 4.38 0.00 46.50 2.73
664 709 0.250727 TGGCCCAAAGCACACTACTC 60.251 55.000 0.00 0.00 46.50 2.59
721 766 1.375523 CGTCAGCCCTAGCCGTTTT 60.376 57.895 0.00 0.00 41.25 2.43
722 767 0.953960 CGTCAGCCCTAGCCGTTTTT 60.954 55.000 0.00 0.00 41.25 1.94
954 999 2.583143 ACACCAACTTAAACCAGAGGC 58.417 47.619 0.00 0.00 0.00 4.70
988 1033 4.247794 CGAGAGTTCGTGTGTAGTAGAG 57.752 50.000 0.00 0.00 41.84 2.43
993 1038 4.396522 AGTTCGTGTGTAGTAGAGGAGTT 58.603 43.478 0.00 0.00 0.00 3.01
1020 1065 4.265056 AAGCCGGCGGTTGAAGGT 62.265 61.111 28.82 2.30 0.00 3.50
1134 1179 0.464735 AGGACGACGAGGGAGATGAG 60.465 60.000 0.00 0.00 0.00 2.90
1230 1284 2.042930 GGGGTGGAGGGTGAGGAT 59.957 66.667 0.00 0.00 0.00 3.24
1290 1344 4.471726 GACGACGACGGCGGTGAT 62.472 66.667 28.89 5.70 44.46 3.06
1302 1356 1.144936 CGGTGATGAAGAGGAGGGC 59.855 63.158 0.00 0.00 0.00 5.19
1350 1404 0.464013 ACGACGATGACGAGGAGGAT 60.464 55.000 0.00 0.00 42.66 3.24
1472 1527 5.121142 CGGTTACGTTTACTCCATGAACATT 59.879 40.000 0.00 0.00 34.81 2.71
1479 1535 7.094933 ACGTTTACTCCATGAACATTTACTTCC 60.095 37.037 0.00 0.00 0.00 3.46
1482 1538 4.935808 ACTCCATGAACATTTACTTCCGTC 59.064 41.667 0.00 0.00 0.00 4.79
1583 1639 7.011482 GGCTGTCGATTAATGTGTTTAGATCTT 59.989 37.037 0.00 0.00 0.00 2.40
1666 1725 0.672342 CTTTTGCTCAACCTGCAGCT 59.328 50.000 8.66 0.00 41.71 4.24
1702 1761 5.401674 GTGTTCGTTTAGATCTTGTCGACTT 59.598 40.000 17.92 0.00 0.00 3.01
1798 1857 1.370587 CCGTCCGTTGTTGTGTGGTT 61.371 55.000 0.00 0.00 0.00 3.67
1829 1888 1.293924 CCATCAGATCAGAACCACGC 58.706 55.000 0.00 0.00 0.00 5.34
1853 1912 4.192317 CCTTTTCCGAGAATAGTCAAGGG 58.808 47.826 4.52 0.00 0.00 3.95
1950 2009 4.072131 TGGTTTTCCATCTGAGCTGTTAC 58.928 43.478 0.00 0.00 46.22 2.50
1981 2040 3.495100 CCACACAATAGAGATGGGGCTAC 60.495 52.174 0.00 0.00 27.99 3.58
2026 2085 7.661536 TCTTACTGTATTAGATCTGCCTTGT 57.338 36.000 5.18 0.29 0.00 3.16
2047 2106 4.104102 TGTGGTCTTCCAAGGTATCTTGTT 59.896 41.667 14.58 0.00 46.65 2.83
2119 2215 3.099141 CAACCAATTTGGATAGTGGGCT 58.901 45.455 22.19 0.00 40.96 5.19
2137 2233 3.554337 GGGCTTAGTTCTCGTTTCTCACA 60.554 47.826 0.00 0.00 0.00 3.58
2154 2250 5.237815 TCTCACACAGATCCAAATACACAC 58.762 41.667 0.00 0.00 0.00 3.82
2156 2252 4.754618 TCACACAGATCCAAATACACACAC 59.245 41.667 0.00 0.00 0.00 3.82
2157 2253 4.514816 CACACAGATCCAAATACACACACA 59.485 41.667 0.00 0.00 0.00 3.72
2158 2254 4.515191 ACACAGATCCAAATACACACACAC 59.485 41.667 0.00 0.00 0.00 3.82
2159 2255 4.514816 CACAGATCCAAATACACACACACA 59.485 41.667 0.00 0.00 0.00 3.72
2160 2256 4.515191 ACAGATCCAAATACACACACACAC 59.485 41.667 0.00 0.00 0.00 3.82
2161 2257 4.514816 CAGATCCAAATACACACACACACA 59.485 41.667 0.00 0.00 0.00 3.72
2162 2258 4.515191 AGATCCAAATACACACACACACAC 59.485 41.667 0.00 0.00 0.00 3.82
2163 2259 3.610911 TCCAAATACACACACACACACA 58.389 40.909 0.00 0.00 0.00 3.72
2164 2260 3.375610 TCCAAATACACACACACACACAC 59.624 43.478 0.00 0.00 0.00 3.82
2165 2261 3.127721 CCAAATACACACACACACACACA 59.872 43.478 0.00 0.00 0.00 3.72
2166 2262 4.094911 CAAATACACACACACACACACAC 58.905 43.478 0.00 0.00 0.00 3.82
2167 2263 2.457366 TACACACACACACACACACA 57.543 45.000 0.00 0.00 0.00 3.72
2168 2264 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2169 2265 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2170 2266 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2171 2267 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2172 2268 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2173 2269 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2174 2270 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2175 2271 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2176 2272 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2177 2273 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2178 2274 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2179 2275 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2180 2276 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2181 2277 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2182 2278 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2183 2279 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2184 2280 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2185 2281 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2186 2282 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2187 2283 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
2188 2284 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
2198 2294 3.976306 CACACACACACACATATGCAAAG 59.024 43.478 1.58 0.00 0.00 2.77
2246 2342 0.621082 AGTAGGCCTTCTTTCCAGCC 59.379 55.000 12.58 0.00 46.13 4.85
2328 2425 2.420022 GCTCGTCCTATGTTGCACATTT 59.580 45.455 7.02 0.00 39.88 2.32
2353 2450 5.591877 ACTGATTTGCCTATCTGATCCAAAC 59.408 40.000 10.97 7.75 0.00 2.93
2370 2467 5.991861 TCCAAACCACTAGTCAAACACTTA 58.008 37.500 0.00 0.00 36.43 2.24
2408 2506 5.712152 ATTTTGTTGAGGAGGTGATGAAC 57.288 39.130 0.00 0.00 0.00 3.18
2462 2560 8.430801 AGAGCTCTTACTATGTTGCAAAATAG 57.569 34.615 28.01 28.01 33.42 1.73
2932 3164 8.940952 GCCTATCTGATCCAAATTACTATTCAC 58.059 37.037 0.00 0.00 0.00 3.18
3004 3236 1.377536 GCTGTTTCTGAGGATGAGCC 58.622 55.000 0.00 0.00 0.00 4.70
3022 3256 1.409427 GCCGAGCTCTACCTATGTTGT 59.591 52.381 12.85 0.00 0.00 3.32
3027 3261 6.281405 CCGAGCTCTACCTATGTTGTAAAAT 58.719 40.000 12.85 0.00 0.00 1.82
3057 3291 8.000709 TGATTTGCCTATCTGATCCAAATTACT 58.999 33.333 17.36 4.73 36.55 2.24
3060 3294 9.507329 TTTGCCTATCTGATCCAAATTACTATC 57.493 33.333 0.00 0.00 0.00 2.08
3189 3423 2.225467 GCCTATCTGATCCAAAGCACC 58.775 52.381 0.00 0.00 0.00 5.01
3264 3498 2.517959 TGCTTGCTATCTTGGCTGTTT 58.482 42.857 0.00 0.00 0.00 2.83
3269 3503 3.485394 TGCTATCTTGGCTGTTTTGTCA 58.515 40.909 0.00 0.00 0.00 3.58
3270 3504 3.888323 TGCTATCTTGGCTGTTTTGTCAA 59.112 39.130 0.00 0.00 0.00 3.18
3549 3786 9.725019 TTGATCTGTCACTAGTTGATTTATGTT 57.275 29.630 0.00 0.00 36.32 2.71
3550 3787 9.154847 TGATCTGTCACTAGTTGATTTATGTTG 57.845 33.333 0.00 0.00 36.32 3.33
3551 3788 7.905604 TCTGTCACTAGTTGATTTATGTTGG 57.094 36.000 0.00 0.00 36.32 3.77
3647 3888 6.480651 TCGTTGTGAGCAGTCAAACTAATTTA 59.519 34.615 0.00 0.00 33.27 1.40
3743 3986 2.670414 CGAAGAGCATTCCAGTGACTTC 59.330 50.000 0.00 0.00 34.22 3.01
3794 4037 2.035321 GGACGAGGAGATTGAGGATGAC 59.965 54.545 0.00 0.00 0.00 3.06
3816 4059 1.126488 TGCTGAGGATGGTGAGGATC 58.874 55.000 0.00 0.00 0.00 3.36
3839 4082 0.252761 TCAAGGCGCAATCCTCATCA 59.747 50.000 10.83 0.00 34.82 3.07
3878 4121 2.707791 TGGGGAGGATGAAGATGATGAC 59.292 50.000 0.00 0.00 0.00 3.06
3941 4184 5.617609 TCAAAGCGATAGTCAATTTGTTCG 58.382 37.500 0.00 3.55 39.35 3.95
3952 4195 3.814842 TCAATTTGTTCGTGCTGATCTGT 59.185 39.130 1.27 0.00 0.00 3.41
3953 4196 3.818961 ATTTGTTCGTGCTGATCTGTG 57.181 42.857 1.27 0.00 0.00 3.66
3959 4202 3.156511 TCGTGCTGATCTGTGATCTTC 57.843 47.619 8.71 2.25 0.00 2.87
4052 4295 0.895530 GTGGTAGGTGTAGCAGCTCA 59.104 55.000 0.00 0.00 41.50 4.26
4180 4423 7.522236 GCTTGTGTAGCTTCTGATTAAAACCTT 60.522 37.037 0.00 0.00 46.77 3.50
4251 4494 7.584987 TCTTGAACTAGCTTGCTGTTATTTTC 58.415 34.615 5.26 0.46 0.00 2.29
4252 4495 7.445402 TCTTGAACTAGCTTGCTGTTATTTTCT 59.555 33.333 5.26 0.00 0.00 2.52
4253 4496 7.133891 TGAACTAGCTTGCTGTTATTTTCTC 57.866 36.000 5.26 0.00 0.00 2.87
4254 4497 6.936900 TGAACTAGCTTGCTGTTATTTTCTCT 59.063 34.615 5.26 0.00 0.00 3.10
4256 4499 7.138692 ACTAGCTTGCTGTTATTTTCTCTTG 57.861 36.000 5.26 0.00 0.00 3.02
4259 4502 6.003950 AGCTTGCTGTTATTTTCTCTTGGTA 58.996 36.000 0.00 0.00 0.00 3.25
4261 4504 7.177392 AGCTTGCTGTTATTTTCTCTTGGTAAT 59.823 33.333 0.00 0.00 0.00 1.89
4262 4505 8.458843 GCTTGCTGTTATTTTCTCTTGGTAATA 58.541 33.333 0.00 0.00 0.00 0.98
4311 4583 5.720371 TTGCTGTTATTGGCACTTACATT 57.280 34.783 0.00 0.00 38.23 2.71
4312 4584 5.309323 TGCTGTTATTGGCACTTACATTC 57.691 39.130 0.00 0.00 33.23 2.67
4313 4585 5.009631 TGCTGTTATTGGCACTTACATTCT 58.990 37.500 0.00 0.00 33.23 2.40
4321 4593 6.707440 TTGGCACTTACATTCTTTCTTTGA 57.293 33.333 0.00 0.00 0.00 2.69
4438 4754 2.559668 CAACCACTAGTCACCCGTCTTA 59.440 50.000 0.00 0.00 0.00 2.10
4472 4788 3.246619 CCAAAGTACTCGTTCTGCTCTC 58.753 50.000 0.00 0.00 0.00 3.20
4476 4792 3.332919 AGTACTCGTTCTGCTCTCGTAA 58.667 45.455 0.00 0.00 0.00 3.18
4587 4904 1.922135 GCGTCCGGCATGTTCATGTT 61.922 55.000 13.24 0.00 42.87 2.71
4588 4905 1.364721 CGTCCGGCATGTTCATGTTA 58.635 50.000 13.24 0.00 0.00 2.41
4592 4909 3.006940 TCCGGCATGTTCATGTTAAGAC 58.993 45.455 13.24 0.00 0.00 3.01
4642 4962 5.352569 CAGAAATCCTTCTACAGTCGCAAAT 59.647 40.000 0.00 0.00 40.05 2.32
4656 4976 1.402720 CGCAAATGGCAATCCTTCGTT 60.403 47.619 0.00 0.00 45.17 3.85
4657 4977 2.687370 GCAAATGGCAATCCTTCGTTT 58.313 42.857 0.00 0.00 43.97 3.60
4658 4978 2.667969 GCAAATGGCAATCCTTCGTTTC 59.332 45.455 0.00 0.00 43.97 2.78
4659 4979 3.860378 GCAAATGGCAATCCTTCGTTTCA 60.860 43.478 0.00 0.00 43.97 2.69
4660 4980 4.305769 CAAATGGCAATCCTTCGTTTCAA 58.694 39.130 0.00 0.00 0.00 2.69
4661 4981 4.806640 AATGGCAATCCTTCGTTTCAAT 57.193 36.364 0.00 0.00 0.00 2.57
4662 4982 3.848272 TGGCAATCCTTCGTTTCAATC 57.152 42.857 0.00 0.00 0.00 2.67
4663 4983 3.153130 TGGCAATCCTTCGTTTCAATCA 58.847 40.909 0.00 0.00 0.00 2.57
4664 4984 3.057596 TGGCAATCCTTCGTTTCAATCAC 60.058 43.478 0.00 0.00 0.00 3.06
4665 4985 3.191371 GGCAATCCTTCGTTTCAATCACT 59.809 43.478 0.00 0.00 0.00 3.41
4666 4986 4.394920 GGCAATCCTTCGTTTCAATCACTA 59.605 41.667 0.00 0.00 0.00 2.74
4667 4987 5.447818 GGCAATCCTTCGTTTCAATCACTAG 60.448 44.000 0.00 0.00 0.00 2.57
4668 4988 5.122396 GCAATCCTTCGTTTCAATCACTAGT 59.878 40.000 0.00 0.00 0.00 2.57
4669 4989 6.537566 CAATCCTTCGTTTCAATCACTAGTG 58.462 40.000 17.17 17.17 0.00 2.74
4670 4990 3.994392 TCCTTCGTTTCAATCACTAGTGC 59.006 43.478 18.45 1.21 0.00 4.40
4671 4991 3.745975 CCTTCGTTTCAATCACTAGTGCA 59.254 43.478 18.45 7.68 0.00 4.57
4672 4992 4.377431 CCTTCGTTTCAATCACTAGTGCAC 60.377 45.833 18.45 9.40 0.00 4.57
4673 4993 3.990092 TCGTTTCAATCACTAGTGCACT 58.010 40.909 25.12 25.12 0.00 4.40
4674 4994 3.740832 TCGTTTCAATCACTAGTGCACTG 59.259 43.478 29.57 20.07 0.00 3.66
4675 4995 3.494626 CGTTTCAATCACTAGTGCACTGT 59.505 43.478 29.57 20.71 0.00 3.55
4676 4996 4.024893 CGTTTCAATCACTAGTGCACTGTT 60.025 41.667 29.57 12.88 0.00 3.16
4677 4997 5.176774 CGTTTCAATCACTAGTGCACTGTTA 59.823 40.000 29.57 15.98 0.00 2.41
4678 4998 6.593978 GTTTCAATCACTAGTGCACTGTTAG 58.406 40.000 29.57 20.46 0.00 2.34
4679 4999 5.722021 TCAATCACTAGTGCACTGTTAGA 57.278 39.130 29.57 20.04 0.00 2.10
4680 5000 6.286240 TCAATCACTAGTGCACTGTTAGAT 57.714 37.500 29.57 21.23 0.00 1.98
4681 5001 6.101997 TCAATCACTAGTGCACTGTTAGATG 58.898 40.000 29.57 19.45 0.00 2.90
4682 5002 3.849911 TCACTAGTGCACTGTTAGATGC 58.150 45.455 29.57 0.00 42.40 3.91
4687 5007 1.713597 TGCACTGTTAGATGCAGTCG 58.286 50.000 0.00 0.00 46.63 4.18
4688 5008 0.371645 GCACTGTTAGATGCAGTCGC 59.628 55.000 0.00 0.00 44.43 5.19
4689 5009 0.642291 CACTGTTAGATGCAGTCGCG 59.358 55.000 0.00 0.00 44.43 5.87
4690 5010 1.078759 ACTGTTAGATGCAGTCGCGC 61.079 55.000 0.00 0.00 42.90 6.86
4691 5011 3.678014 ACTGTTAGATGCAGTCGCGCA 62.678 52.381 8.75 0.00 42.90 6.09
4692 5012 0.669012 TGTTAGATGCAGTCGCGCAA 60.669 50.000 8.75 0.00 46.87 4.85
4693 5013 0.652592 GTTAGATGCAGTCGCGCAAT 59.347 50.000 8.75 0.00 46.87 3.56
4694 5014 0.652071 TTAGATGCAGTCGCGCAATG 59.348 50.000 8.75 5.53 46.87 2.82
4695 5015 1.765161 TAGATGCAGTCGCGCAATGC 61.765 55.000 20.10 20.10 46.87 3.56
4697 5017 3.658075 TGCAGTCGCGCAATGCAA 61.658 55.556 24.85 13.28 46.31 4.08
4698 5018 2.872925 GCAGTCGCGCAATGCAAG 60.873 61.111 21.35 0.00 46.97 4.01
4699 5019 2.872925 CAGTCGCGCAATGCAAGC 60.873 61.111 8.75 0.00 46.97 4.01
4700 5020 3.356267 AGTCGCGCAATGCAAGCA 61.356 55.556 8.75 0.00 46.97 3.91
4701 5021 2.202518 GTCGCGCAATGCAAGCAT 60.203 55.556 8.75 0.86 46.97 3.79
4702 5022 2.100797 TCGCGCAATGCAAGCATC 59.899 55.556 8.75 4.93 46.97 3.91
4703 5023 2.202505 CGCGCAATGCAAGCATCA 60.203 55.556 8.75 0.00 46.97 3.07
4704 5024 1.802314 CGCGCAATGCAAGCATCAA 60.802 52.632 8.75 0.00 46.97 2.57
4705 5025 1.143373 CGCGCAATGCAAGCATCAAT 61.143 50.000 8.75 0.00 46.97 2.57
4706 5026 0.575390 GCGCAATGCAAGCATCAATC 59.425 50.000 8.14 0.00 45.45 2.67
4707 5027 1.801395 GCGCAATGCAAGCATCAATCT 60.801 47.619 8.14 0.00 45.45 2.40
4708 5028 2.117137 CGCAATGCAAGCATCAATCTC 58.883 47.619 8.14 0.00 35.31 2.75
4709 5029 2.478879 CGCAATGCAAGCATCAATCTCA 60.479 45.455 8.14 0.00 35.31 3.27
4710 5030 3.517602 GCAATGCAAGCATCAATCTCAA 58.482 40.909 8.14 0.00 35.31 3.02
4711 5031 3.930229 GCAATGCAAGCATCAATCTCAAA 59.070 39.130 8.14 0.00 35.31 2.69
4712 5032 4.570772 GCAATGCAAGCATCAATCTCAAAT 59.429 37.500 8.14 0.00 35.31 2.32
4713 5033 5.276868 GCAATGCAAGCATCAATCTCAAATC 60.277 40.000 8.14 0.00 35.31 2.17
4714 5034 5.854010 ATGCAAGCATCAATCTCAAATCT 57.146 34.783 0.86 0.00 29.42 2.40
4715 5035 6.954487 ATGCAAGCATCAATCTCAAATCTA 57.046 33.333 0.86 0.00 29.42 1.98
4716 5036 6.373186 TGCAAGCATCAATCTCAAATCTAG 57.627 37.500 0.00 0.00 0.00 2.43
4717 5037 5.298527 TGCAAGCATCAATCTCAAATCTAGG 59.701 40.000 0.00 0.00 0.00 3.02
4718 5038 5.530171 GCAAGCATCAATCTCAAATCTAGGA 59.470 40.000 0.00 0.00 0.00 2.94
4719 5039 6.207025 GCAAGCATCAATCTCAAATCTAGGAT 59.793 38.462 0.00 0.00 0.00 3.24
4720 5040 7.255520 GCAAGCATCAATCTCAAATCTAGGATT 60.256 37.037 0.00 0.00 0.00 3.01
4721 5041 8.630917 CAAGCATCAATCTCAAATCTAGGATTT 58.369 33.333 0.31 0.31 0.00 2.17
4722 5042 8.393671 AGCATCAATCTCAAATCTAGGATTTC 57.606 34.615 2.94 0.00 0.00 2.17
4723 5043 7.997223 AGCATCAATCTCAAATCTAGGATTTCA 59.003 33.333 2.94 0.00 0.00 2.69
4724 5044 8.291032 GCATCAATCTCAAATCTAGGATTTCAG 58.709 37.037 2.94 0.83 0.00 3.02
4725 5045 7.798596 TCAATCTCAAATCTAGGATTTCAGC 57.201 36.000 2.94 0.00 0.00 4.26
4726 5046 7.571919 TCAATCTCAAATCTAGGATTTCAGCT 58.428 34.615 2.94 0.00 0.00 4.24
4727 5047 7.714377 TCAATCTCAAATCTAGGATTTCAGCTC 59.286 37.037 2.94 0.00 0.00 4.09
4728 5048 6.805016 TCTCAAATCTAGGATTTCAGCTCT 57.195 37.500 2.94 0.00 0.00 4.09
4729 5049 6.580788 TCTCAAATCTAGGATTTCAGCTCTG 58.419 40.000 2.94 0.00 0.00 3.35
4730 5050 6.382282 TCTCAAATCTAGGATTTCAGCTCTGA 59.618 38.462 2.94 0.00 37.91 3.27
4731 5051 6.344500 TCAAATCTAGGATTTCAGCTCTGAC 58.656 40.000 0.00 0.00 39.66 3.51
4732 5052 4.582701 ATCTAGGATTTCAGCTCTGACG 57.417 45.455 0.00 0.00 39.66 4.35
4733 5053 2.690497 TCTAGGATTTCAGCTCTGACGG 59.310 50.000 0.00 0.00 39.66 4.79
4734 5054 0.539051 AGGATTTCAGCTCTGACGGG 59.461 55.000 0.00 0.00 39.66 5.28
4735 5055 1.092345 GGATTTCAGCTCTGACGGGC 61.092 60.000 0.00 0.00 39.66 6.13
4736 5056 0.107945 GATTTCAGCTCTGACGGGCT 60.108 55.000 0.00 0.00 39.66 5.19
4740 5060 2.604686 AGCTCTGACGGGCTGGAA 60.605 61.111 0.00 0.00 37.41 3.53
4741 5061 2.217038 AGCTCTGACGGGCTGGAAA 61.217 57.895 0.00 0.00 37.41 3.13
4742 5062 1.078143 GCTCTGACGGGCTGGAAAT 60.078 57.895 0.00 0.00 0.00 2.17
4743 5063 0.178068 GCTCTGACGGGCTGGAAATA 59.822 55.000 0.00 0.00 0.00 1.40
4744 5064 1.941325 CTCTGACGGGCTGGAAATAC 58.059 55.000 0.00 0.00 0.00 1.89
4745 5065 0.539986 TCTGACGGGCTGGAAATACC 59.460 55.000 0.00 0.00 39.54 2.73
4754 5074 2.082834 TGGAAATACCAGCCAGCCA 58.917 52.632 0.00 0.00 44.64 4.75
4755 5075 0.407528 TGGAAATACCAGCCAGCCAA 59.592 50.000 0.00 0.00 44.64 4.52
4756 5076 0.817654 GGAAATACCAGCCAGCCAAC 59.182 55.000 0.00 0.00 38.79 3.77
4757 5077 0.817654 GAAATACCAGCCAGCCAACC 59.182 55.000 0.00 0.00 0.00 3.77
4758 5078 0.114168 AAATACCAGCCAGCCAACCA 59.886 50.000 0.00 0.00 0.00 3.67
4759 5079 0.336048 AATACCAGCCAGCCAACCAT 59.664 50.000 0.00 0.00 0.00 3.55
4760 5080 0.336048 ATACCAGCCAGCCAACCATT 59.664 50.000 0.00 0.00 0.00 3.16
4761 5081 0.114168 TACCAGCCAGCCAACCATTT 59.886 50.000 0.00 0.00 0.00 2.32
4762 5082 0.114168 ACCAGCCAGCCAACCATTTA 59.886 50.000 0.00 0.00 0.00 1.40
4763 5083 0.819582 CCAGCCAGCCAACCATTTAG 59.180 55.000 0.00 0.00 0.00 1.85
4764 5084 0.819582 CAGCCAGCCAACCATTTAGG 59.180 55.000 0.00 0.00 45.67 2.69
4765 5085 0.324645 AGCCAGCCAACCATTTAGGG 60.325 55.000 0.00 0.00 43.89 3.53
4766 5086 1.960040 GCCAGCCAACCATTTAGGGC 61.960 60.000 0.00 0.00 46.77 5.19
4770 5090 1.194218 GCCAACCATTTAGGGCATGT 58.806 50.000 0.00 0.00 45.70 3.21
4771 5091 1.554617 GCCAACCATTTAGGGCATGTT 59.445 47.619 0.00 0.00 45.70 2.71
4772 5092 2.027285 GCCAACCATTTAGGGCATGTTT 60.027 45.455 0.00 0.00 45.70 2.83
4773 5093 3.598299 CCAACCATTTAGGGCATGTTTG 58.402 45.455 0.00 0.00 43.89 2.93
4774 5094 3.598299 CAACCATTTAGGGCATGTTTGG 58.402 45.455 0.00 0.00 43.89 3.28
4775 5095 2.901291 ACCATTTAGGGCATGTTTGGT 58.099 42.857 0.00 0.00 43.89 3.67
4776 5096 3.247162 ACCATTTAGGGCATGTTTGGTT 58.753 40.909 0.00 0.00 43.89 3.67
4777 5097 3.007831 ACCATTTAGGGCATGTTTGGTTG 59.992 43.478 0.00 0.00 43.89 3.77
4778 5098 2.829741 TTTAGGGCATGTTTGGTTGC 57.170 45.000 0.00 0.00 38.14 4.17
4782 5102 3.935196 GCATGTTTGGTTGCCGTG 58.065 55.556 0.00 0.00 32.66 4.94
4783 5103 1.664333 GCATGTTTGGTTGCCGTGG 60.664 57.895 0.00 0.00 32.66 4.94
4784 5104 1.739049 CATGTTTGGTTGCCGTGGT 59.261 52.632 0.00 0.00 0.00 4.16
4785 5105 0.597118 CATGTTTGGTTGCCGTGGTG 60.597 55.000 0.00 0.00 0.00 4.17
4786 5106 0.753479 ATGTTTGGTTGCCGTGGTGA 60.753 50.000 0.00 0.00 0.00 4.02
4787 5107 0.965866 TGTTTGGTTGCCGTGGTGAA 60.966 50.000 0.00 0.00 0.00 3.18
4788 5108 0.526739 GTTTGGTTGCCGTGGTGAAC 60.527 55.000 0.00 0.00 0.00 3.18
4789 5109 0.965866 TTTGGTTGCCGTGGTGAACA 60.966 50.000 5.62 0.00 0.00 3.18
4790 5110 1.380403 TTGGTTGCCGTGGTGAACAG 61.380 55.000 5.62 0.00 0.00 3.16
4791 5111 1.822186 GGTTGCCGTGGTGAACAGT 60.822 57.895 5.62 0.00 0.00 3.55
4792 5112 1.381165 GGTTGCCGTGGTGAACAGTT 61.381 55.000 0.00 0.00 0.00 3.16
4793 5113 0.028902 GTTGCCGTGGTGAACAGTTC 59.971 55.000 6.32 6.32 0.00 3.01
4794 5114 1.098712 TTGCCGTGGTGAACAGTTCC 61.099 55.000 10.93 2.36 0.00 3.62
4795 5115 1.227853 GCCGTGGTGAACAGTTCCT 60.228 57.895 10.93 0.00 0.00 3.36
4796 5116 1.507141 GCCGTGGTGAACAGTTCCTG 61.507 60.000 10.93 0.00 37.52 3.86
4797 5117 0.105964 CCGTGGTGAACAGTTCCTGA 59.894 55.000 10.93 0.00 35.18 3.86
4798 5118 1.474320 CCGTGGTGAACAGTTCCTGAA 60.474 52.381 10.93 0.00 35.18 3.02
4799 5119 2.494059 CGTGGTGAACAGTTCCTGAAT 58.506 47.619 10.93 0.00 35.18 2.57
4800 5120 2.480419 CGTGGTGAACAGTTCCTGAATC 59.520 50.000 10.93 0.00 35.18 2.52
4801 5121 2.480419 GTGGTGAACAGTTCCTGAATCG 59.520 50.000 10.93 0.00 35.18 3.34
4802 5122 1.464997 GGTGAACAGTTCCTGAATCGC 59.535 52.381 10.93 3.21 35.18 4.58
4803 5123 2.143122 GTGAACAGTTCCTGAATCGCA 58.857 47.619 10.93 0.00 34.38 5.10
4804 5124 2.744202 GTGAACAGTTCCTGAATCGCAT 59.256 45.455 10.93 0.00 34.38 4.73
4805 5125 3.932710 GTGAACAGTTCCTGAATCGCATA 59.067 43.478 10.93 0.00 34.38 3.14
4806 5126 3.932710 TGAACAGTTCCTGAATCGCATAC 59.067 43.478 10.93 0.00 35.18 2.39
4807 5127 3.610040 ACAGTTCCTGAATCGCATACA 57.390 42.857 0.00 0.00 35.18 2.29
4808 5128 3.262420 ACAGTTCCTGAATCGCATACAC 58.738 45.455 0.00 0.00 35.18 2.90
4809 5129 3.055819 ACAGTTCCTGAATCGCATACACT 60.056 43.478 0.00 0.00 35.18 3.55
4810 5130 3.935203 CAGTTCCTGAATCGCATACACTT 59.065 43.478 0.00 0.00 32.44 3.16
4811 5131 4.033358 CAGTTCCTGAATCGCATACACTTC 59.967 45.833 0.00 0.00 32.44 3.01
4812 5132 4.081420 AGTTCCTGAATCGCATACACTTCT 60.081 41.667 0.00 0.00 0.00 2.85
4813 5133 4.046938 TCCTGAATCGCATACACTTCTC 57.953 45.455 0.00 0.00 0.00 2.87
4814 5134 3.447229 TCCTGAATCGCATACACTTCTCA 59.553 43.478 0.00 0.00 0.00 3.27
4815 5135 4.081697 TCCTGAATCGCATACACTTCTCAA 60.082 41.667 0.00 0.00 0.00 3.02
4816 5136 4.631377 CCTGAATCGCATACACTTCTCAAA 59.369 41.667 0.00 0.00 0.00 2.69
4817 5137 5.446473 CCTGAATCGCATACACTTCTCAAAC 60.446 44.000 0.00 0.00 0.00 2.93
4818 5138 4.391830 TGAATCGCATACACTTCTCAAACC 59.608 41.667 0.00 0.00 0.00 3.27
4819 5139 3.394674 TCGCATACACTTCTCAAACCA 57.605 42.857 0.00 0.00 0.00 3.67
4820 5140 3.325870 TCGCATACACTTCTCAAACCAG 58.674 45.455 0.00 0.00 0.00 4.00
4821 5141 2.159653 CGCATACACTTCTCAAACCAGC 60.160 50.000 0.00 0.00 0.00 4.85
4822 5142 2.162408 GCATACACTTCTCAAACCAGCC 59.838 50.000 0.00 0.00 0.00 4.85
4823 5143 3.679389 CATACACTTCTCAAACCAGCCT 58.321 45.455 0.00 0.00 0.00 4.58
4824 5144 1.972872 ACACTTCTCAAACCAGCCTG 58.027 50.000 0.00 0.00 0.00 4.85
4825 5145 1.242076 CACTTCTCAAACCAGCCTGG 58.758 55.000 9.83 9.83 45.02 4.45
4834 5154 4.179361 CCAGCCTGGTTGAGCAAA 57.821 55.556 12.54 0.00 31.35 3.68
4835 5155 2.428834 CCAGCCTGGTTGAGCAAAA 58.571 52.632 12.54 0.00 31.35 2.44
4836 5156 0.752054 CCAGCCTGGTTGAGCAAAAA 59.248 50.000 12.54 0.00 31.35 1.94
4837 5157 1.538849 CCAGCCTGGTTGAGCAAAAAC 60.539 52.381 12.54 0.00 31.35 2.43
4838 5158 1.136695 CAGCCTGGTTGAGCAAAAACA 59.863 47.619 4.28 0.00 0.00 2.83
4839 5159 1.410153 AGCCTGGTTGAGCAAAAACAG 59.590 47.619 8.97 8.97 43.27 3.16
4841 5161 1.856802 CTGGTTGAGCAAAAACAGGC 58.143 50.000 8.23 0.00 40.53 4.85
4842 5162 0.463620 TGGTTGAGCAAAAACAGGCC 59.536 50.000 0.00 0.00 0.00 5.19
4843 5163 0.249868 GGTTGAGCAAAAACAGGCCC 60.250 55.000 0.00 0.00 0.00 5.80
4844 5164 0.752658 GTTGAGCAAAAACAGGCCCT 59.247 50.000 0.00 0.00 0.00 5.19
4845 5165 1.960689 GTTGAGCAAAAACAGGCCCTA 59.039 47.619 0.00 0.00 0.00 3.53
4846 5166 2.364002 GTTGAGCAAAAACAGGCCCTAA 59.636 45.455 0.00 0.00 0.00 2.69
4847 5167 2.888212 TGAGCAAAAACAGGCCCTAAT 58.112 42.857 0.00 0.00 0.00 1.73
4848 5168 4.040936 TGAGCAAAAACAGGCCCTAATA 57.959 40.909 0.00 0.00 0.00 0.98
4849 5169 3.761752 TGAGCAAAAACAGGCCCTAATAC 59.238 43.478 0.00 0.00 0.00 1.89
4850 5170 2.752903 AGCAAAAACAGGCCCTAATACG 59.247 45.455 0.00 0.00 0.00 3.06
4851 5171 2.490509 GCAAAAACAGGCCCTAATACGT 59.509 45.455 0.00 0.00 0.00 3.57
4852 5172 3.427098 GCAAAAACAGGCCCTAATACGTC 60.427 47.826 0.00 0.00 0.00 4.34
4853 5173 3.706600 AAAACAGGCCCTAATACGTCA 57.293 42.857 0.00 0.00 0.00 4.35
4854 5174 3.926058 AAACAGGCCCTAATACGTCAT 57.074 42.857 0.00 0.00 0.00 3.06
4855 5175 3.470645 AACAGGCCCTAATACGTCATC 57.529 47.619 0.00 0.00 0.00 2.92
4856 5176 2.679082 ACAGGCCCTAATACGTCATCT 58.321 47.619 0.00 0.00 0.00 2.90
4857 5177 2.365617 ACAGGCCCTAATACGTCATCTG 59.634 50.000 0.00 0.00 0.00 2.90
4858 5178 1.344763 AGGCCCTAATACGTCATCTGC 59.655 52.381 0.00 0.00 0.00 4.26
4859 5179 1.070134 GGCCCTAATACGTCATCTGCA 59.930 52.381 0.00 0.00 0.00 4.41
4860 5180 2.484770 GGCCCTAATACGTCATCTGCAA 60.485 50.000 0.00 0.00 0.00 4.08
4861 5181 2.802816 GCCCTAATACGTCATCTGCAAG 59.197 50.000 0.00 0.00 0.00 4.01
4862 5182 3.741388 GCCCTAATACGTCATCTGCAAGT 60.741 47.826 0.00 0.00 33.76 3.16
4863 5183 4.442706 CCCTAATACGTCATCTGCAAGTT 58.557 43.478 0.00 0.00 33.76 2.66
4864 5184 4.271049 CCCTAATACGTCATCTGCAAGTTG 59.729 45.833 0.00 0.00 34.98 3.16
4865 5185 4.870426 CCTAATACGTCATCTGCAAGTTGT 59.130 41.667 4.48 0.00 35.22 3.32
4866 5186 5.351465 CCTAATACGTCATCTGCAAGTTGTT 59.649 40.000 4.48 0.00 35.22 2.83
4867 5187 5.689383 AATACGTCATCTGCAAGTTGTTT 57.311 34.783 4.48 0.00 35.22 2.83
4868 5188 3.338818 ACGTCATCTGCAAGTTGTTTG 57.661 42.857 4.48 0.00 39.88 2.93
4869 5189 2.033299 ACGTCATCTGCAAGTTGTTTGG 59.967 45.455 4.48 0.00 37.26 3.28
4870 5190 2.033299 CGTCATCTGCAAGTTGTTTGGT 59.967 45.455 4.48 0.00 37.26 3.67
4871 5191 3.489059 CGTCATCTGCAAGTTGTTTGGTT 60.489 43.478 4.48 0.00 37.26 3.67
4872 5192 3.798337 GTCATCTGCAAGTTGTTTGGTTG 59.202 43.478 4.48 0.00 37.26 3.77
4873 5193 2.292103 TCTGCAAGTTGTTTGGTTGC 57.708 45.000 4.48 0.00 45.56 4.17
4874 5194 1.134848 TCTGCAAGTTGTTTGGTTGCC 60.135 47.619 4.48 0.00 44.90 4.52
4875 5195 0.901124 TGCAAGTTGTTTGGTTGCCT 59.099 45.000 4.48 0.00 44.90 4.75
4876 5196 1.289276 GCAAGTTGTTTGGTTGCCTG 58.711 50.000 4.48 0.00 40.61 4.85
4877 5197 1.289276 CAAGTTGTTTGGTTGCCTGC 58.711 50.000 0.00 0.00 32.95 4.85
4878 5198 0.901124 AAGTTGTTTGGTTGCCTGCA 59.099 45.000 0.00 0.00 0.00 4.41
4879 5199 1.122227 AGTTGTTTGGTTGCCTGCAT 58.878 45.000 0.00 0.00 0.00 3.96
4880 5200 1.069049 AGTTGTTTGGTTGCCTGCATC 59.931 47.619 0.00 0.00 0.00 3.91
4881 5201 1.069049 GTTGTTTGGTTGCCTGCATCT 59.931 47.619 0.00 0.00 0.00 2.90
4882 5202 2.284754 TGTTTGGTTGCCTGCATCTA 57.715 45.000 0.00 0.00 0.00 1.98
4883 5203 2.161855 TGTTTGGTTGCCTGCATCTAG 58.838 47.619 0.00 0.00 0.00 2.43
4884 5204 2.162681 GTTTGGTTGCCTGCATCTAGT 58.837 47.619 0.00 0.00 0.00 2.57
4885 5205 1.825090 TTGGTTGCCTGCATCTAGTG 58.175 50.000 0.00 0.00 0.00 2.74
4886 5206 0.692476 TGGTTGCCTGCATCTAGTGT 59.308 50.000 0.00 0.00 0.00 3.55
4887 5207 1.339055 TGGTTGCCTGCATCTAGTGTC 60.339 52.381 0.00 0.00 0.00 3.67
4888 5208 1.373570 GTTGCCTGCATCTAGTGTCC 58.626 55.000 0.00 0.00 0.00 4.02
4889 5209 0.253044 TTGCCTGCATCTAGTGTCCC 59.747 55.000 0.00 0.00 0.00 4.46
4890 5210 0.618680 TGCCTGCATCTAGTGTCCCT 60.619 55.000 0.00 0.00 0.00 4.20
4891 5211 0.179062 GCCTGCATCTAGTGTCCCTG 60.179 60.000 0.00 0.00 0.00 4.45
4892 5212 0.179062 CCTGCATCTAGTGTCCCTGC 60.179 60.000 0.00 0.00 0.00 4.85
4893 5213 0.538584 CTGCATCTAGTGTCCCTGCA 59.461 55.000 0.00 0.00 40.29 4.41
4894 5214 1.140452 CTGCATCTAGTGTCCCTGCAT 59.860 52.381 0.00 0.00 41.55 3.96
4895 5215 1.561076 TGCATCTAGTGTCCCTGCATT 59.439 47.619 0.00 0.00 37.88 3.56
4896 5216 2.771372 TGCATCTAGTGTCCCTGCATTA 59.229 45.455 0.00 0.00 37.88 1.90
4897 5217 3.181462 TGCATCTAGTGTCCCTGCATTAG 60.181 47.826 0.00 0.00 37.88 1.73
4898 5218 3.805108 GCATCTAGTGTCCCTGCATTAGG 60.805 52.174 0.00 0.00 46.88 2.69
4899 5219 3.116096 TCTAGTGTCCCTGCATTAGGT 57.884 47.619 0.00 0.00 45.80 3.08
4900 5220 4.259933 TCTAGTGTCCCTGCATTAGGTA 57.740 45.455 0.00 0.00 45.80 3.08
4901 5221 4.616553 TCTAGTGTCCCTGCATTAGGTAA 58.383 43.478 0.00 0.00 45.80 2.85
4902 5222 5.216622 TCTAGTGTCCCTGCATTAGGTAAT 58.783 41.667 0.00 0.00 45.80 1.89
4903 5223 6.378745 TCTAGTGTCCCTGCATTAGGTAATA 58.621 40.000 0.00 0.00 45.80 0.98
4904 5224 5.291905 AGTGTCCCTGCATTAGGTAATAC 57.708 43.478 0.00 0.00 45.80 1.89
4905 5225 4.719773 AGTGTCCCTGCATTAGGTAATACA 59.280 41.667 0.00 0.00 45.80 2.29
4906 5226 4.814771 GTGTCCCTGCATTAGGTAATACAC 59.185 45.833 0.00 0.00 45.80 2.90
4907 5227 4.471747 TGTCCCTGCATTAGGTAATACACA 59.528 41.667 0.00 0.00 45.80 3.72
4908 5228 5.045505 TGTCCCTGCATTAGGTAATACACAA 60.046 40.000 0.00 0.00 45.80 3.33
4909 5229 5.527582 GTCCCTGCATTAGGTAATACACAAG 59.472 44.000 0.00 0.00 45.80 3.16
4910 5230 5.190925 TCCCTGCATTAGGTAATACACAAGT 59.809 40.000 0.00 0.00 45.80 3.16
4911 5231 5.296780 CCCTGCATTAGGTAATACACAAGTG 59.703 44.000 0.00 0.00 45.80 3.16
4912 5232 5.220854 CCTGCATTAGGTAATACACAAGTGC 60.221 44.000 0.00 0.00 42.00 4.40
4913 5233 5.249420 TGCATTAGGTAATACACAAGTGCA 58.751 37.500 0.00 5.45 35.98 4.57
4914 5234 5.123186 TGCATTAGGTAATACACAAGTGCAC 59.877 40.000 9.40 9.40 34.52 4.57
4915 5235 5.354234 GCATTAGGTAATACACAAGTGCACT 59.646 40.000 15.25 15.25 31.59 4.40
4916 5236 6.128007 GCATTAGGTAATACACAAGTGCACTT 60.128 38.462 26.36 26.36 36.45 3.16
4917 5237 7.464358 CATTAGGTAATACACAAGTGCACTTC 58.536 38.462 28.97 14.77 33.11 3.01
4918 5238 3.994392 AGGTAATACACAAGTGCACTTCG 59.006 43.478 28.97 23.46 33.11 3.79
4919 5239 3.744426 GGTAATACACAAGTGCACTTCGT 59.256 43.478 28.97 27.29 33.11 3.85
4920 5240 4.212636 GGTAATACACAAGTGCACTTCGTT 59.787 41.667 28.97 19.08 33.11 3.85
4921 5241 4.893424 AATACACAAGTGCACTTCGTTT 57.107 36.364 28.97 22.31 33.11 3.60
4922 5242 2.542766 ACACAAGTGCACTTCGTTTG 57.457 45.000 28.97 22.72 33.11 2.93
4923 5243 1.132262 ACACAAGTGCACTTCGTTTGG 59.868 47.619 28.97 18.49 33.11 3.28
4924 5244 1.132262 CACAAGTGCACTTCGTTTGGT 59.868 47.619 28.97 19.14 33.11 3.67
4925 5245 1.816224 ACAAGTGCACTTCGTTTGGTT 59.184 42.857 28.97 2.18 33.11 3.67
4926 5246 2.184448 CAAGTGCACTTCGTTTGGTTG 58.816 47.619 28.97 11.89 33.11 3.77
4927 5247 0.100503 AGTGCACTTCGTTTGGTTGC 59.899 50.000 15.25 0.00 0.00 4.17
4928 5248 0.869880 GTGCACTTCGTTTGGTTGCC 60.870 55.000 10.32 0.00 0.00 4.52
4929 5249 1.034838 TGCACTTCGTTTGGTTGCCT 61.035 50.000 0.00 0.00 0.00 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.163343 TGCTAGCTAATGGGTTAACCTAGTG 60.163 44.000 23.69 12.70 41.11 2.74
1 2 4.966805 TGCTAGCTAATGGGTTAACCTAGT 59.033 41.667 23.69 19.55 41.11 2.57
2 3 5.163343 TGTGCTAGCTAATGGGTTAACCTAG 60.163 44.000 23.69 17.58 41.11 3.02
8 9 3.118038 CCCTTGTGCTAGCTAATGGGTTA 60.118 47.826 22.58 0.00 0.00 2.85
28 29 3.636282 AAATGTACACGAAACTTGCCC 57.364 42.857 0.00 0.00 0.00 5.36
74 75 4.232091 ACCCTGTTCAAGAACCTTCTAGA 58.768 43.478 10.19 0.00 40.46 2.43
75 76 4.625607 ACCCTGTTCAAGAACCTTCTAG 57.374 45.455 10.19 1.22 40.46 2.43
76 77 5.382664 AAACCCTGTTCAAGAACCTTCTA 57.617 39.130 10.19 0.00 40.46 2.10
273 314 9.883142 GAACAAAATTTGAATATTCCATGGGTA 57.117 29.630 13.02 6.06 0.00 3.69
274 315 8.381636 TGAACAAAATTTGAATATTCCATGGGT 58.618 29.630 13.02 3.69 0.00 4.51
275 316 8.789825 TGAACAAAATTTGAATATTCCATGGG 57.210 30.769 13.02 0.00 0.00 4.00
362 404 9.276397 GTGAACAAAATTTGAAATTCCAAACAG 57.724 29.630 13.19 0.00 38.65 3.16
401 443 4.151157 GCAGCAATTGAAGATTTTGACCAC 59.849 41.667 10.34 0.00 0.00 4.16
527 570 2.359975 CCAAACGGGACCTCCTGC 60.360 66.667 0.00 0.00 46.43 4.85
566 609 5.482006 GAAAAGTTAGCCCAATCAGCAAAT 58.518 37.500 0.00 0.00 0.00 2.32
575 618 4.822896 ACATGTAACGAAAAGTTAGCCCAA 59.177 37.500 0.00 0.00 45.10 4.12
600 645 0.802494 CCACAGATGGTTGCGTTACC 59.198 55.000 1.62 1.62 41.64 2.85
721 766 2.203788 AGCTCGTGAGGTGGGGAA 60.204 61.111 0.00 0.00 37.82 3.97
722 767 2.680352 GAGCTCGTGAGGTGGGGA 60.680 66.667 6.27 0.00 39.57 4.81
954 999 3.650415 GAACTCTCGCGAGAAAATTTCG 58.350 45.455 35.84 25.00 41.32 3.46
988 1033 1.472376 CGGCTTCATCTCCTCAACTCC 60.472 57.143 0.00 0.00 0.00 3.85
993 1038 2.903357 GCCGGCTTCATCTCCTCA 59.097 61.111 22.15 0.00 0.00 3.86
1134 1179 2.683933 TCAACCGCCTCCTCCTCC 60.684 66.667 0.00 0.00 0.00 4.30
1155 1200 4.108437 TCGTCGTCGTCGTCGTCG 62.108 66.667 20.39 20.39 45.27 5.12
1156 1201 2.566765 GTCGTCGTCGTCGTCGTC 60.567 66.667 18.44 11.28 45.27 4.20
1157 1202 4.400776 CGTCGTCGTCGTCGTCGT 62.401 66.667 18.87 0.00 45.27 4.34
1158 1203 4.108437 TCGTCGTCGTCGTCGTCG 62.108 66.667 20.39 20.39 45.27 5.12
1159 1204 2.566765 GTCGTCGTCGTCGTCGTC 60.567 66.667 18.44 11.28 45.27 4.20
1160 1205 4.400776 CGTCGTCGTCGTCGTCGT 62.401 66.667 18.87 0.00 45.27 4.34
1287 1341 1.306141 ACCGCCCTCCTCTTCATCA 60.306 57.895 0.00 0.00 0.00 3.07
1290 1344 2.119611 TCACCGCCCTCCTCTTCA 59.880 61.111 0.00 0.00 0.00 3.02
1302 1356 1.194280 CGTCGTCATCATCGTCACCG 61.194 60.000 0.00 0.00 0.00 4.94
1314 1368 3.029735 TCGTCGTCGTCGTCGTCA 61.030 61.111 18.44 1.12 45.27 4.35
1413 1468 7.389232 AGATGGCATATATTTGAGATGACGAA 58.611 34.615 0.00 0.00 37.63 3.85
1415 1470 6.815142 TGAGATGGCATATATTTGAGATGACG 59.185 38.462 0.00 0.00 37.63 4.35
1417 1472 7.914859 ACTGAGATGGCATATATTTGAGATGA 58.085 34.615 0.00 0.00 0.00 2.92
1479 1535 6.983307 AGATCTGGAATTTCTCTAACATGACG 59.017 38.462 0.00 0.00 0.00 4.35
1482 1538 7.986320 AGACAGATCTGGAATTTCTCTAACATG 59.014 37.037 26.08 0.00 32.29 3.21
1666 1725 4.695217 AAACGAACACAGAGCAGAAAAA 57.305 36.364 0.00 0.00 0.00 1.94
1702 1761 4.708421 AGGTTGAACGGTATAGCAGAGTAA 59.292 41.667 2.37 0.00 0.00 2.24
1798 1857 0.983467 TCTGATGGGCTACACTGCAA 59.017 50.000 0.00 0.00 34.04 4.08
1829 1888 3.906720 TGACTATTCTCGGAAAAGGGG 57.093 47.619 0.00 0.00 0.00 4.79
1922 1981 3.879321 GCTCAGATGGAAAACCATCCCTT 60.879 47.826 20.93 5.03 45.37 3.95
1950 2009 5.808366 TCTCTATTGTGTGGCTTATAGGG 57.192 43.478 0.00 0.00 0.00 3.53
2012 2071 3.055094 GGAAGACCACAAGGCAGATCTAA 60.055 47.826 0.00 0.00 39.06 2.10
2115 2211 2.994578 GTGAGAAACGAGAACTAAGCCC 59.005 50.000 0.00 0.00 0.00 5.19
2119 2215 5.509716 TCTGTGTGAGAAACGAGAACTAA 57.490 39.130 0.00 0.00 0.00 2.24
2137 2233 4.515191 GTGTGTGTGTGTATTTGGATCTGT 59.485 41.667 0.00 0.00 0.00 3.41
2154 2250 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2156 2252 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2157 2253 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2158 2254 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2159 2255 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2160 2256 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2161 2257 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2162 2258 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2163 2259 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2164 2260 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2165 2261 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2166 2262 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2167 2263 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2168 2264 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2169 2265 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
2170 2266 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
2171 2267 1.819928 ATGTGTGTGTGTGTGTGTGT 58.180 45.000 0.00 0.00 0.00 3.72
2172 2268 3.849281 GCATATGTGTGTGTGTGTGTGTG 60.849 47.826 4.29 0.00 0.00 3.82
2173 2269 2.290367 GCATATGTGTGTGTGTGTGTGT 59.710 45.455 4.29 0.00 0.00 3.72
2174 2270 2.290093 TGCATATGTGTGTGTGTGTGTG 59.710 45.455 4.29 0.00 0.00 3.82
2175 2271 2.570135 TGCATATGTGTGTGTGTGTGT 58.430 42.857 4.29 0.00 0.00 3.72
2176 2272 3.622627 TTGCATATGTGTGTGTGTGTG 57.377 42.857 4.29 0.00 0.00 3.82
2177 2273 3.631686 ACTTTGCATATGTGTGTGTGTGT 59.368 39.130 4.29 0.00 0.00 3.72
2178 2274 4.227512 ACTTTGCATATGTGTGTGTGTG 57.772 40.909 4.29 0.00 0.00 3.82
2179 2275 6.573664 AATACTTTGCATATGTGTGTGTGT 57.426 33.333 4.29 0.00 0.00 3.72
2180 2276 8.236586 ACTAAATACTTTGCATATGTGTGTGTG 58.763 33.333 4.29 0.00 0.00 3.82
2181 2277 8.236586 CACTAAATACTTTGCATATGTGTGTGT 58.763 33.333 4.29 0.90 0.00 3.72
2182 2278 8.236586 ACACTAAATACTTTGCATATGTGTGTG 58.763 33.333 4.29 5.69 34.31 3.82
2183 2279 8.335532 ACACTAAATACTTTGCATATGTGTGT 57.664 30.769 4.29 0.00 34.31 3.72
2184 2280 9.920826 CTACACTAAATACTTTGCATATGTGTG 57.079 33.333 4.29 0.00 36.52 3.82
2185 2281 9.884636 TCTACACTAAATACTTTGCATATGTGT 57.115 29.630 4.29 0.00 38.30 3.72
2246 2342 2.026915 TCTCCAATCACACATGGACAGG 60.027 50.000 0.00 0.00 40.74 4.00
2306 2403 0.391130 TGTGCAACATAGGACGAGCC 60.391 55.000 0.00 0.00 45.67 4.70
2328 2425 6.499106 TTGGATCAGATAGGCAAATCAGTA 57.501 37.500 0.00 0.00 0.00 2.74
2353 2450 7.925993 TGAAAATGTAAGTGTTTGACTAGTGG 58.074 34.615 0.00 0.00 33.09 4.00
2392 2490 3.840078 TCTGATGTTCATCACCTCCTCAA 59.160 43.478 10.88 0.00 0.00 3.02
2408 2506 2.235650 TCCTCAGAAACAGCCTCTGATG 59.764 50.000 3.17 1.63 46.25 3.07
2446 2544 6.532657 GCAAATCAGCTATTTTGCAACATAGT 59.467 34.615 27.70 14.54 35.54 2.12
2462 2560 3.748083 TGGATCAGATAGGCAAATCAGC 58.252 45.455 0.00 0.00 0.00 4.26
2518 2616 8.707796 ATATTCATCATCTCCTCAGCAAAATT 57.292 30.769 0.00 0.00 0.00 1.82
2818 2916 5.867903 TCATCTCCTTGGCAAAAGAAAAA 57.132 34.783 13.93 3.13 0.00 1.94
2873 3105 9.314321 GTTATTTTGCAACATAGTAGAGCTCTA 57.686 33.333 19.72 19.72 0.00 2.43
3004 3236 7.772332 AATTTTACAACATAGGTAGAGCTCG 57.228 36.000 8.37 0.00 0.00 5.03
3027 3261 6.499106 TGGATCAGATAGGCAAATCAGTAA 57.501 37.500 0.00 0.00 0.00 2.24
3080 3314 9.425248 TTCATCATCTCCTAGGCAAAATAAAAT 57.575 29.630 2.96 0.00 0.00 1.82
3212 3446 1.222113 GCTTCTCACCAGTAGCCCC 59.778 63.158 0.00 0.00 37.13 5.80
3269 3503 9.467796 TTCCCAAATGAAGGTAAAACAAATTTT 57.532 25.926 0.00 0.00 41.07 1.82
3270 3504 9.467796 TTTCCCAAATGAAGGTAAAACAAATTT 57.532 25.926 0.00 0.00 34.92 1.82
3290 3524 9.650714 ATCTGAAGAATTAATCATCATTTCCCA 57.349 29.630 0.00 0.00 35.39 4.37
3452 3686 9.608617 CAATTTCTCATCATTCTGAATAATCCG 57.391 33.333 1.98 0.00 0.00 4.18
3647 3888 1.750778 CAAACAACAGTGCAAGGGTCT 59.249 47.619 0.00 0.00 0.00 3.85
3743 3986 2.426522 TCACCATTTTCTTCTGGCTCG 58.573 47.619 0.00 0.00 35.88 5.03
3794 4037 0.249784 CCTCACCATCCTCAGCATCG 60.250 60.000 0.00 0.00 0.00 3.84
3816 4059 1.372087 GAGGATTGCGCCTTGACAGG 61.372 60.000 4.18 0.00 44.28 4.00
3839 4082 1.981495 CCACCAGACCTCTTCCTCTTT 59.019 52.381 0.00 0.00 0.00 2.52
3878 4121 1.202405 TCACCATCATCATCACCGTCG 60.202 52.381 0.00 0.00 0.00 5.12
3941 4184 4.114073 CAGAGAAGATCACAGATCAGCAC 58.886 47.826 9.43 0.65 0.00 4.40
3952 4195 0.254178 GGCCCAAGCAGAGAAGATCA 59.746 55.000 0.00 0.00 42.56 2.92
3953 4196 0.254178 TGGCCCAAGCAGAGAAGATC 59.746 55.000 0.00 0.00 42.56 2.75
3959 4202 0.964358 CCTTCTTGGCCCAAGCAGAG 60.964 60.000 22.60 16.58 40.84 3.35
3992 4235 4.016444 GCATTTACCAACAATCCTCTCCA 58.984 43.478 0.00 0.00 0.00 3.86
4052 4295 6.435292 ACTAACATGGGTAGACTCAAGTTT 57.565 37.500 8.31 0.00 0.00 2.66
4180 4423 2.885135 ACAGAGCATCCACATTCCAA 57.115 45.000 0.00 0.00 33.66 3.53
4251 4494 8.583765 GCGCTTAAACAAAAATATTACCAAGAG 58.416 33.333 0.00 0.00 0.00 2.85
4252 4495 8.301002 AGCGCTTAAACAAAAATATTACCAAGA 58.699 29.630 2.64 0.00 0.00 3.02
4253 4496 8.460831 AGCGCTTAAACAAAAATATTACCAAG 57.539 30.769 2.64 0.00 0.00 3.61
4254 4497 8.819643 AAGCGCTTAAACAAAAATATTACCAA 57.180 26.923 23.72 0.00 0.00 3.67
4256 4499 9.777575 TCTAAGCGCTTAAACAAAAATATTACC 57.222 29.630 28.44 0.00 0.00 2.85
4261 4504 9.517609 TGTTTTCTAAGCGCTTAAACAAAAATA 57.482 25.926 32.16 25.45 0.00 1.40
4262 4505 8.413899 TGTTTTCTAAGCGCTTAAACAAAAAT 57.586 26.923 32.16 10.85 0.00 1.82
4272 4544 3.983344 CAGCAAATGTTTTCTAAGCGCTT 59.017 39.130 27.97 27.97 0.00 4.68
4311 4583 6.461509 GCTTGTTGAGGGAATTCAAAGAAAGA 60.462 38.462 7.93 0.00 38.69 2.52
4312 4584 5.693555 GCTTGTTGAGGGAATTCAAAGAAAG 59.306 40.000 7.93 3.49 38.69 2.62
4313 4585 5.453198 GGCTTGTTGAGGGAATTCAAAGAAA 60.453 40.000 7.93 0.00 38.69 2.52
4321 4593 2.978156 TCAGGCTTGTTGAGGGAATT 57.022 45.000 0.00 0.00 0.00 2.17
4438 4754 0.751643 ACTTTGGTTGAACGCCTGCT 60.752 50.000 0.00 0.00 0.00 4.24
4472 4788 4.208047 CGAGCTCTCAATCTCCAATTTACG 59.792 45.833 12.85 0.00 0.00 3.18
4476 4792 2.158842 CCCGAGCTCTCAATCTCCAATT 60.159 50.000 12.85 0.00 0.00 2.32
4587 4904 2.288213 CCAGTGCACTCGTGAAGTCTTA 60.288 50.000 18.64 0.00 35.45 2.10
4588 4905 1.539065 CCAGTGCACTCGTGAAGTCTT 60.539 52.381 18.64 0.00 35.45 3.01
4592 4909 0.668706 CCTCCAGTGCACTCGTGAAG 60.669 60.000 18.64 9.65 0.00 3.02
4642 4962 3.057596 GTGATTGAAACGAAGGATTGCCA 60.058 43.478 0.00 0.00 36.29 4.92
4656 4976 6.096673 TCTAACAGTGCACTAGTGATTGAA 57.903 37.500 27.08 12.16 33.76 2.69
4657 4977 5.722021 TCTAACAGTGCACTAGTGATTGA 57.278 39.130 27.08 6.94 33.76 2.57
4658 4978 5.220548 GCATCTAACAGTGCACTAGTGATTG 60.221 44.000 27.08 20.31 40.94 2.67
4659 4979 4.872691 GCATCTAACAGTGCACTAGTGATT 59.127 41.667 27.08 11.28 40.94 2.57
4660 4980 4.081476 TGCATCTAACAGTGCACTAGTGAT 60.081 41.667 27.08 16.70 45.60 3.06
4661 4981 3.258123 TGCATCTAACAGTGCACTAGTGA 59.742 43.478 27.08 15.21 45.60 3.41
4662 4982 3.588955 TGCATCTAACAGTGCACTAGTG 58.411 45.455 21.20 18.93 45.60 2.74
4663 4983 3.259374 ACTGCATCTAACAGTGCACTAGT 59.741 43.478 21.20 16.78 46.38 2.57
4664 4984 3.854666 ACTGCATCTAACAGTGCACTAG 58.145 45.455 21.20 14.05 46.38 2.57
4665 4985 3.961480 ACTGCATCTAACAGTGCACTA 57.039 42.857 21.20 3.40 46.38 2.74
4666 4986 2.847327 ACTGCATCTAACAGTGCACT 57.153 45.000 15.25 15.25 46.38 4.40
4672 4992 1.078201 TGCGCGACTGCATCTAACAG 61.078 55.000 12.10 0.00 40.62 3.16
4673 4993 0.669012 TTGCGCGACTGCATCTAACA 60.669 50.000 12.10 0.00 45.78 2.41
4674 4994 0.652592 ATTGCGCGACTGCATCTAAC 59.347 50.000 12.10 0.00 45.78 2.34
4675 4995 0.652071 CATTGCGCGACTGCATCTAA 59.348 50.000 12.10 0.00 45.78 2.10
4676 4996 1.765161 GCATTGCGCGACTGCATCTA 61.765 55.000 12.10 0.00 45.78 1.98
4677 4997 3.095911 CATTGCGCGACTGCATCT 58.904 55.556 12.10 0.00 45.78 2.90
4678 4998 2.649975 GCATTGCGCGACTGCATC 60.650 61.111 12.10 0.00 45.78 3.91
4679 4999 2.860690 CTTGCATTGCGCGACTGCAT 62.861 55.000 25.33 0.00 45.78 3.96
4680 5000 3.598228 CTTGCATTGCGCGACTGCA 62.598 57.895 22.36 22.36 46.97 4.41
4681 5001 2.872925 CTTGCATTGCGCGACTGC 60.873 61.111 12.10 15.71 46.97 4.40
4682 5002 2.860690 ATGCTTGCATTGCGCGACTG 62.861 55.000 12.10 4.19 46.97 3.51
4683 5003 2.588146 GATGCTTGCATTGCGCGACT 62.588 55.000 12.10 0.00 46.97 4.18
4684 5004 2.202518 ATGCTTGCATTGCGCGAC 60.203 55.556 12.10 0.88 46.97 5.19
4685 5005 2.100797 GATGCTTGCATTGCGCGA 59.899 55.556 12.10 0.00 46.97 5.87
4686 5006 1.143373 ATTGATGCTTGCATTGCGCG 61.143 50.000 9.59 0.00 46.97 6.86
4687 5007 0.575390 GATTGATGCTTGCATTGCGC 59.425 50.000 9.59 0.00 42.89 6.09
4688 5008 2.117137 GAGATTGATGCTTGCATTGCG 58.883 47.619 9.59 0.00 0.00 4.85
4689 5009 3.159353 TGAGATTGATGCTTGCATTGC 57.841 42.857 9.59 0.46 0.00 3.56
4690 5010 6.042777 AGATTTGAGATTGATGCTTGCATTG 58.957 36.000 9.59 0.00 0.00 2.82
4691 5011 6.222038 AGATTTGAGATTGATGCTTGCATT 57.778 33.333 9.59 0.00 0.00 3.56
4692 5012 5.854010 AGATTTGAGATTGATGCTTGCAT 57.146 34.783 7.91 7.91 0.00 3.96
4693 5013 5.298527 CCTAGATTTGAGATTGATGCTTGCA 59.701 40.000 0.00 0.00 0.00 4.08
4694 5014 5.530171 TCCTAGATTTGAGATTGATGCTTGC 59.470 40.000 0.00 0.00 0.00 4.01
4695 5015 7.747155 ATCCTAGATTTGAGATTGATGCTTG 57.253 36.000 0.00 0.00 0.00 4.01
4696 5016 8.763984 AAATCCTAGATTTGAGATTGATGCTT 57.236 30.769 1.87 0.00 0.00 3.91
4697 5017 7.997223 TGAAATCCTAGATTTGAGATTGATGCT 59.003 33.333 7.27 0.00 0.00 3.79
4698 5018 8.162878 TGAAATCCTAGATTTGAGATTGATGC 57.837 34.615 7.27 0.00 0.00 3.91
4699 5019 8.291032 GCTGAAATCCTAGATTTGAGATTGATG 58.709 37.037 17.21 0.00 0.00 3.07
4700 5020 8.219178 AGCTGAAATCCTAGATTTGAGATTGAT 58.781 33.333 17.21 0.00 0.00 2.57
4701 5021 7.571919 AGCTGAAATCCTAGATTTGAGATTGA 58.428 34.615 17.21 0.00 0.00 2.57
4702 5022 7.716123 AGAGCTGAAATCCTAGATTTGAGATTG 59.284 37.037 17.21 0.00 0.00 2.67
4703 5023 7.716123 CAGAGCTGAAATCCTAGATTTGAGATT 59.284 37.037 17.21 7.04 0.00 2.40
4704 5024 7.070946 TCAGAGCTGAAATCCTAGATTTGAGAT 59.929 37.037 17.21 12.41 36.53 2.75
4705 5025 6.382282 TCAGAGCTGAAATCCTAGATTTGAGA 59.618 38.462 17.21 0.00 36.53 3.27
4706 5026 6.479660 GTCAGAGCTGAAATCCTAGATTTGAG 59.520 42.308 10.89 10.89 41.85 3.02
4707 5027 6.344500 GTCAGAGCTGAAATCCTAGATTTGA 58.656 40.000 7.27 0.00 41.85 2.69
4708 5028 5.233902 CGTCAGAGCTGAAATCCTAGATTTG 59.766 44.000 7.27 0.00 41.85 2.32
4709 5029 5.355596 CGTCAGAGCTGAAATCCTAGATTT 58.644 41.667 1.08 2.30 41.85 2.17
4710 5030 4.202202 CCGTCAGAGCTGAAATCCTAGATT 60.202 45.833 1.08 0.00 41.85 2.40
4711 5031 3.320541 CCGTCAGAGCTGAAATCCTAGAT 59.679 47.826 1.08 0.00 41.85 1.98
4712 5032 2.690497 CCGTCAGAGCTGAAATCCTAGA 59.310 50.000 1.08 0.00 41.85 2.43
4713 5033 2.223923 CCCGTCAGAGCTGAAATCCTAG 60.224 54.545 1.08 0.00 41.85 3.02
4714 5034 1.757118 CCCGTCAGAGCTGAAATCCTA 59.243 52.381 1.08 0.00 41.85 2.94
4715 5035 0.539051 CCCGTCAGAGCTGAAATCCT 59.461 55.000 1.08 0.00 41.85 3.24
4716 5036 1.092345 GCCCGTCAGAGCTGAAATCC 61.092 60.000 1.08 0.00 41.85 3.01
4717 5037 0.107945 AGCCCGTCAGAGCTGAAATC 60.108 55.000 1.08 0.00 41.85 2.17
4718 5038 1.986413 AGCCCGTCAGAGCTGAAAT 59.014 52.632 1.08 0.00 41.85 2.17
4719 5039 3.471620 AGCCCGTCAGAGCTGAAA 58.528 55.556 1.08 0.00 41.85 2.69
4723 5043 1.557269 ATTTCCAGCCCGTCAGAGCT 61.557 55.000 0.00 0.00 40.89 4.09
4724 5044 0.178068 TATTTCCAGCCCGTCAGAGC 59.822 55.000 0.00 0.00 0.00 4.09
4725 5045 1.473434 GGTATTTCCAGCCCGTCAGAG 60.473 57.143 0.00 0.00 35.97 3.35
4726 5046 0.539986 GGTATTTCCAGCCCGTCAGA 59.460 55.000 0.00 0.00 35.97 3.27
4727 5047 0.251916 TGGTATTTCCAGCCCGTCAG 59.748 55.000 0.00 0.00 41.93 3.51
4728 5048 2.378211 TGGTATTTCCAGCCCGTCA 58.622 52.632 0.00 0.00 41.93 4.35
4736 5056 0.407528 TTGGCTGGCTGGTATTTCCA 59.592 50.000 2.00 0.00 45.01 3.53
4737 5057 0.817654 GTTGGCTGGCTGGTATTTCC 59.182 55.000 2.00 0.00 0.00 3.13
4738 5058 0.817654 GGTTGGCTGGCTGGTATTTC 59.182 55.000 2.00 0.00 0.00 2.17
4739 5059 0.114168 TGGTTGGCTGGCTGGTATTT 59.886 50.000 2.00 0.00 0.00 1.40
4740 5060 0.336048 ATGGTTGGCTGGCTGGTATT 59.664 50.000 2.00 0.00 0.00 1.89
4741 5061 0.336048 AATGGTTGGCTGGCTGGTAT 59.664 50.000 2.00 0.00 0.00 2.73
4742 5062 0.114168 AAATGGTTGGCTGGCTGGTA 59.886 50.000 2.00 0.00 0.00 3.25
4743 5063 0.114168 TAAATGGTTGGCTGGCTGGT 59.886 50.000 2.00 0.00 0.00 4.00
4744 5064 0.819582 CTAAATGGTTGGCTGGCTGG 59.180 55.000 2.00 0.00 0.00 4.85
4745 5065 0.819582 CCTAAATGGTTGGCTGGCTG 59.180 55.000 2.00 0.00 0.00 4.85
4746 5066 0.324645 CCCTAAATGGTTGGCTGGCT 60.325 55.000 2.00 0.00 0.00 4.75
4747 5067 1.960040 GCCCTAAATGGTTGGCTGGC 61.960 60.000 0.00 0.00 40.77 4.85
4748 5068 0.614415 TGCCCTAAATGGTTGGCTGG 60.614 55.000 0.00 0.00 44.32 4.85
4749 5069 1.137479 CATGCCCTAAATGGTTGGCTG 59.863 52.381 0.00 0.00 44.32 4.85
4750 5070 1.273211 ACATGCCCTAAATGGTTGGCT 60.273 47.619 0.00 0.00 44.32 4.75
4751 5071 1.194218 ACATGCCCTAAATGGTTGGC 58.806 50.000 0.00 0.00 44.27 4.52
4752 5072 3.598299 CAAACATGCCCTAAATGGTTGG 58.402 45.455 6.33 0.00 45.12 3.77
4754 5074 3.247162 ACCAAACATGCCCTAAATGGTT 58.753 40.909 0.00 0.00 36.32 3.67
4755 5075 2.901291 ACCAAACATGCCCTAAATGGT 58.099 42.857 0.00 0.00 34.98 3.55
4756 5076 3.598299 CAACCAAACATGCCCTAAATGG 58.402 45.455 0.00 0.00 0.00 3.16
4757 5077 3.002102 GCAACCAAACATGCCCTAAATG 58.998 45.455 0.00 0.00 36.56 2.32
4758 5078 3.333029 GCAACCAAACATGCCCTAAAT 57.667 42.857 0.00 0.00 36.56 1.40
4759 5079 2.829741 GCAACCAAACATGCCCTAAA 57.170 45.000 0.00 0.00 36.56 1.85
4765 5085 1.664333 CCACGGCAACCAAACATGC 60.664 57.895 0.00 0.00 41.82 4.06
4766 5086 0.597118 CACCACGGCAACCAAACATG 60.597 55.000 0.00 0.00 0.00 3.21
4767 5087 0.753479 TCACCACGGCAACCAAACAT 60.753 50.000 0.00 0.00 0.00 2.71
4768 5088 0.965866 TTCACCACGGCAACCAAACA 60.966 50.000 0.00 0.00 0.00 2.83
4769 5089 0.526739 GTTCACCACGGCAACCAAAC 60.527 55.000 0.00 0.00 0.00 2.93
4770 5090 0.965866 TGTTCACCACGGCAACCAAA 60.966 50.000 0.00 0.00 0.00 3.28
4771 5091 1.378646 TGTTCACCACGGCAACCAA 60.379 52.632 0.00 0.00 0.00 3.67
4772 5092 1.821759 CTGTTCACCACGGCAACCA 60.822 57.895 0.00 0.00 0.00 3.67
4773 5093 1.381165 AACTGTTCACCACGGCAACC 61.381 55.000 0.00 0.00 34.68 3.77
4774 5094 0.028902 GAACTGTTCACCACGGCAAC 59.971 55.000 15.34 0.00 34.68 4.17
4775 5095 1.098712 GGAACTGTTCACCACGGCAA 61.099 55.000 21.01 0.00 34.68 4.52
4776 5096 1.525077 GGAACTGTTCACCACGGCA 60.525 57.895 21.01 0.00 34.68 5.69
4777 5097 1.227853 AGGAACTGTTCACCACGGC 60.228 57.895 21.01 3.11 37.18 5.68
4789 5109 3.895232 AGTGTATGCGATTCAGGAACT 57.105 42.857 0.00 0.00 43.88 3.01
4790 5110 4.184629 AGAAGTGTATGCGATTCAGGAAC 58.815 43.478 0.00 0.00 0.00 3.62
4791 5111 4.081697 TGAGAAGTGTATGCGATTCAGGAA 60.082 41.667 0.00 0.00 0.00 3.36
4792 5112 3.447229 TGAGAAGTGTATGCGATTCAGGA 59.553 43.478 0.00 0.00 0.00 3.86
4793 5113 3.785486 TGAGAAGTGTATGCGATTCAGG 58.215 45.455 0.00 0.00 0.00 3.86
4794 5114 5.446473 GGTTTGAGAAGTGTATGCGATTCAG 60.446 44.000 0.00 0.00 0.00 3.02
4795 5115 4.391830 GGTTTGAGAAGTGTATGCGATTCA 59.608 41.667 0.00 0.00 0.00 2.57
4796 5116 4.391830 TGGTTTGAGAAGTGTATGCGATTC 59.608 41.667 0.00 0.00 0.00 2.52
4797 5117 4.323417 TGGTTTGAGAAGTGTATGCGATT 58.677 39.130 0.00 0.00 0.00 3.34
4798 5118 3.935203 CTGGTTTGAGAAGTGTATGCGAT 59.065 43.478 0.00 0.00 0.00 4.58
4799 5119 3.325870 CTGGTTTGAGAAGTGTATGCGA 58.674 45.455 0.00 0.00 0.00 5.10
4800 5120 2.159653 GCTGGTTTGAGAAGTGTATGCG 60.160 50.000 0.00 0.00 0.00 4.73
4801 5121 2.162408 GGCTGGTTTGAGAAGTGTATGC 59.838 50.000 0.00 0.00 0.00 3.14
4802 5122 3.438087 CAGGCTGGTTTGAGAAGTGTATG 59.562 47.826 6.61 0.00 0.00 2.39
4803 5123 3.560025 CCAGGCTGGTTTGAGAAGTGTAT 60.560 47.826 25.74 0.00 31.35 2.29
4804 5124 2.224523 CCAGGCTGGTTTGAGAAGTGTA 60.225 50.000 25.74 0.00 31.35 2.90
4805 5125 1.477558 CCAGGCTGGTTTGAGAAGTGT 60.478 52.381 25.74 0.00 31.35 3.55
4806 5126 1.242076 CCAGGCTGGTTTGAGAAGTG 58.758 55.000 25.74 0.00 31.35 3.16
4807 5127 3.733709 CCAGGCTGGTTTGAGAAGT 57.266 52.632 25.74 0.00 31.35 3.01
4817 5137 0.752054 TTTTTGCTCAACCAGGCTGG 59.248 50.000 31.62 31.62 45.02 4.85
4818 5138 1.136695 TGTTTTTGCTCAACCAGGCTG 59.863 47.619 7.75 7.75 0.00 4.85
4819 5139 1.410153 CTGTTTTTGCTCAACCAGGCT 59.590 47.619 0.00 0.00 0.00 4.58
4820 5140 1.538849 CCTGTTTTTGCTCAACCAGGC 60.539 52.381 8.36 0.00 0.00 4.85
4821 5141 1.538849 GCCTGTTTTTGCTCAACCAGG 60.539 52.381 13.55 13.55 0.00 4.45
4822 5142 1.538849 GGCCTGTTTTTGCTCAACCAG 60.539 52.381 0.00 0.00 0.00 4.00
4823 5143 0.463620 GGCCTGTTTTTGCTCAACCA 59.536 50.000 0.00 0.00 0.00 3.67
4824 5144 0.249868 GGGCCTGTTTTTGCTCAACC 60.250 55.000 0.84 0.00 0.00 3.77
4825 5145 0.752658 AGGGCCTGTTTTTGCTCAAC 59.247 50.000 4.50 0.00 0.00 3.18
4826 5146 2.373335 TAGGGCCTGTTTTTGCTCAA 57.627 45.000 18.53 0.00 0.00 3.02
4827 5147 2.373335 TTAGGGCCTGTTTTTGCTCA 57.627 45.000 18.53 0.00 0.00 4.26
4828 5148 3.181500 CGTATTAGGGCCTGTTTTTGCTC 60.181 47.826 18.53 0.00 0.00 4.26
4829 5149 2.752903 CGTATTAGGGCCTGTTTTTGCT 59.247 45.455 18.53 0.00 0.00 3.91
4830 5150 2.490509 ACGTATTAGGGCCTGTTTTTGC 59.509 45.455 18.53 0.00 0.00 3.68
4831 5151 3.754323 TGACGTATTAGGGCCTGTTTTTG 59.246 43.478 18.53 4.07 0.00 2.44
4832 5152 4.023726 TGACGTATTAGGGCCTGTTTTT 57.976 40.909 18.53 0.00 0.00 1.94
4833 5153 3.706600 TGACGTATTAGGGCCTGTTTT 57.293 42.857 18.53 0.06 0.00 2.43
4834 5154 3.454812 AGATGACGTATTAGGGCCTGTTT 59.545 43.478 18.53 2.87 0.00 2.83
4835 5155 3.039011 AGATGACGTATTAGGGCCTGTT 58.961 45.455 18.53 5.73 0.00 3.16
4836 5156 2.365617 CAGATGACGTATTAGGGCCTGT 59.634 50.000 18.53 4.37 0.00 4.00
4837 5157 2.868044 GCAGATGACGTATTAGGGCCTG 60.868 54.545 18.53 0.23 0.00 4.85
4838 5158 1.344763 GCAGATGACGTATTAGGGCCT 59.655 52.381 12.58 12.58 0.00 5.19
4839 5159 1.070134 TGCAGATGACGTATTAGGGCC 59.930 52.381 0.00 0.00 0.00 5.80
4840 5160 2.526304 TGCAGATGACGTATTAGGGC 57.474 50.000 0.00 0.00 0.00 5.19
4841 5161 4.060038 ACTTGCAGATGACGTATTAGGG 57.940 45.455 0.00 0.00 0.00 3.53
4842 5162 4.870426 ACAACTTGCAGATGACGTATTAGG 59.130 41.667 0.00 0.00 0.00 2.69
4843 5163 6.408858 AACAACTTGCAGATGACGTATTAG 57.591 37.500 0.00 0.00 0.00 1.73
4844 5164 6.348132 CCAAACAACTTGCAGATGACGTATTA 60.348 38.462 0.00 0.00 33.27 0.98
4845 5165 5.451908 CAAACAACTTGCAGATGACGTATT 58.548 37.500 0.00 0.00 0.00 1.89
4846 5166 4.083324 CCAAACAACTTGCAGATGACGTAT 60.083 41.667 0.00 0.00 33.27 3.06
4847 5167 3.249799 CCAAACAACTTGCAGATGACGTA 59.750 43.478 0.00 0.00 33.27 3.57
4848 5168 2.033299 CCAAACAACTTGCAGATGACGT 59.967 45.455 0.00 0.00 33.27 4.34
4849 5169 2.033299 ACCAAACAACTTGCAGATGACG 59.967 45.455 2.91 0.00 33.27 4.35
4850 5170 3.715628 ACCAAACAACTTGCAGATGAC 57.284 42.857 2.91 0.00 33.27 3.06
4851 5171 3.737663 GCAACCAAACAACTTGCAGATGA 60.738 43.478 2.91 0.00 40.09 2.92
4852 5172 2.540931 GCAACCAAACAACTTGCAGATG 59.459 45.455 0.00 0.00 40.09 2.90
4853 5173 2.483538 GGCAACCAAACAACTTGCAGAT 60.484 45.455 4.18 0.00 41.77 2.90
4854 5174 1.134848 GGCAACCAAACAACTTGCAGA 60.135 47.619 4.18 0.00 41.77 4.26
4855 5175 1.134729 AGGCAACCAAACAACTTGCAG 60.135 47.619 4.18 0.00 41.77 4.41
4856 5176 0.901124 AGGCAACCAAACAACTTGCA 59.099 45.000 4.18 0.00 41.77 4.08
4857 5177 1.289276 CAGGCAACCAAACAACTTGC 58.711 50.000 0.00 0.00 39.70 4.01
4858 5178 1.289276 GCAGGCAACCAAACAACTTG 58.711 50.000 0.00 0.00 34.52 3.16
4859 5179 0.901124 TGCAGGCAACCAAACAACTT 59.099 45.000 0.00 0.00 37.17 2.66
4860 5180 1.069049 GATGCAGGCAACCAAACAACT 59.931 47.619 0.00 0.00 37.17 3.16
4861 5181 1.069049 AGATGCAGGCAACCAAACAAC 59.931 47.619 0.00 0.00 37.17 3.32
4862 5182 1.412079 AGATGCAGGCAACCAAACAA 58.588 45.000 0.00 0.00 37.17 2.83
4863 5183 2.161855 CTAGATGCAGGCAACCAAACA 58.838 47.619 0.00 0.00 37.17 2.83
4864 5184 2.095059 CACTAGATGCAGGCAACCAAAC 60.095 50.000 0.00 0.00 37.17 2.93
4865 5185 2.161855 CACTAGATGCAGGCAACCAAA 58.838 47.619 0.00 0.00 37.17 3.28
4866 5186 1.073763 ACACTAGATGCAGGCAACCAA 59.926 47.619 0.00 0.00 37.17 3.67
4867 5187 0.692476 ACACTAGATGCAGGCAACCA 59.308 50.000 0.00 0.00 37.17 3.67
4868 5188 1.373570 GACACTAGATGCAGGCAACC 58.626 55.000 0.00 0.00 37.17 3.77
4869 5189 1.373570 GGACACTAGATGCAGGCAAC 58.626 55.000 0.00 0.00 0.00 4.17
4870 5190 0.253044 GGGACACTAGATGCAGGCAA 59.747 55.000 0.00 0.00 0.00 4.52
4871 5191 0.618680 AGGGACACTAGATGCAGGCA 60.619 55.000 0.00 0.00 0.00 4.75
4872 5192 0.179062 CAGGGACACTAGATGCAGGC 60.179 60.000 0.00 0.00 0.00 4.85
4873 5193 0.179062 GCAGGGACACTAGATGCAGG 60.179 60.000 0.00 0.00 36.88 4.85
4874 5194 0.538584 TGCAGGGACACTAGATGCAG 59.461 55.000 0.00 0.00 41.65 4.41
4875 5195 2.682631 TGCAGGGACACTAGATGCA 58.317 52.632 0.00 0.00 44.10 3.96
4876 5196 2.338577 AATGCAGGGACACTAGATGC 57.661 50.000 0.00 0.00 37.40 3.91
4877 5197 4.000331 CCTAATGCAGGGACACTAGATG 58.000 50.000 0.00 0.00 41.26 2.90
4889 5209 5.353956 TGCACTTGTGTATTACCTAATGCAG 59.646 40.000 0.00 0.00 38.61 4.41
4890 5210 5.123186 GTGCACTTGTGTATTACCTAATGCA 59.877 40.000 10.32 0.00 36.23 3.96
4891 5211 5.354234 AGTGCACTTGTGTATTACCTAATGC 59.646 40.000 15.25 0.00 0.00 3.56
4892 5212 6.985188 AGTGCACTTGTGTATTACCTAATG 57.015 37.500 15.25 0.00 0.00 1.90
4893 5213 6.312918 CGAAGTGCACTTGTGTATTACCTAAT 59.687 38.462 35.67 6.53 36.11 1.73
4894 5214 5.636121 CGAAGTGCACTTGTGTATTACCTAA 59.364 40.000 35.67 0.00 36.11 2.69
4895 5215 5.165676 CGAAGTGCACTTGTGTATTACCTA 58.834 41.667 35.67 0.00 36.11 3.08
4896 5216 3.994392 CGAAGTGCACTTGTGTATTACCT 59.006 43.478 35.67 7.99 36.11 3.08
4897 5217 3.744426 ACGAAGTGCACTTGTGTATTACC 59.256 43.478 35.67 16.67 42.51 2.85
4898 5218 4.985044 ACGAAGTGCACTTGTGTATTAC 57.015 40.909 35.67 17.37 42.51 1.89
4899 5219 5.277586 CCAAACGAAGTGCACTTGTGTATTA 60.278 40.000 35.67 0.00 45.00 0.98
4900 5220 4.497340 CCAAACGAAGTGCACTTGTGTATT 60.497 41.667 35.67 22.58 45.00 1.89
4901 5221 3.003275 CCAAACGAAGTGCACTTGTGTAT 59.997 43.478 35.67 19.06 45.00 2.29
4902 5222 2.353269 CCAAACGAAGTGCACTTGTGTA 59.647 45.455 35.67 0.00 45.00 2.90
4903 5223 1.132262 CCAAACGAAGTGCACTTGTGT 59.868 47.619 35.67 27.94 45.00 3.72
4904 5224 1.132262 ACCAAACGAAGTGCACTTGTG 59.868 47.619 35.67 27.31 45.00 3.33
4905 5225 1.459450 ACCAAACGAAGTGCACTTGT 58.541 45.000 35.67 27.28 45.00 3.16
4906 5226 2.184448 CAACCAAACGAAGTGCACTTG 58.816 47.619 35.67 26.67 45.00 3.16
4907 5227 1.469079 GCAACCAAACGAAGTGCACTT 60.469 47.619 31.57 31.57 45.00 3.16
4908 5228 0.100503 GCAACCAAACGAAGTGCACT 59.899 50.000 15.25 15.25 45.00 4.40
4909 5229 0.869880 GGCAACCAAACGAAGTGCAC 60.870 55.000 9.40 9.40 45.00 4.57
4910 5230 1.034838 AGGCAACCAAACGAAGTGCA 61.035 50.000 0.00 0.00 38.39 4.57
4911 5231 1.733526 AGGCAACCAAACGAAGTGC 59.266 52.632 0.00 0.00 38.39 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.