Multiple sequence alignment - TraesCS3B01G372300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G372300 chr3B 100.000 2612 0 0 1 2612 584986166 584983555 0.000000e+00 4824.0
1 TraesCS3B01G372300 chr3B 87.158 1098 76 35 728 1795 585139271 585138209 0.000000e+00 1186.0
2 TraesCS3B01G372300 chr3B 85.461 846 78 26 968 1795 585023459 585022641 0.000000e+00 839.0
3 TraesCS3B01G372300 chr3B 89.231 65 5 2 407 471 582989939 582990001 2.150000e-11 80.5
4 TraesCS3B01G372300 chr3B 89.231 65 5 2 407 471 583083084 583083146 2.150000e-11 80.5
5 TraesCS3B01G372300 chr3D 93.867 1924 75 17 700 2612 446075834 446073943 0.000000e+00 2859.0
6 TraesCS3B01G372300 chr3D 88.222 900 76 16 737 1616 446191966 446191077 0.000000e+00 1048.0
7 TraesCS3B01G372300 chr3D 85.831 981 85 27 837 1795 446110205 446109257 0.000000e+00 992.0
8 TraesCS3B01G372300 chr3D 81.124 747 58 39 1 697 446076661 446075948 2.980000e-144 521.0
9 TraesCS3B01G372300 chr3D 93.243 74 3 2 739 812 446110273 446110202 9.880000e-20 108.0
10 TraesCS3B01G372300 chr3A 88.475 1987 116 38 629 2557 587885060 587883129 0.000000e+00 2296.0
11 TraesCS3B01G372300 chr3A 87.299 1118 93 27 700 1795 587906553 587905463 0.000000e+00 1232.0
12 TraesCS3B01G372300 chr3A 84.743 1088 105 37 737 1796 587966689 587965635 0.000000e+00 1033.0
13 TraesCS3B01G372300 chr6D 77.987 159 28 7 313 469 42477289 42477136 2.770000e-15 93.5
14 TraesCS3B01G372300 chr4D 85.227 88 13 0 1095 1182 102534314 102534227 9.950000e-15 91.6
15 TraesCS3B01G372300 chr2B 78.632 117 18 7 368 480 757396785 757396672 1.300000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G372300 chr3B 584983555 584986166 2611 True 4824 4824 100.0000 1 2612 1 chr3B.!!$R1 2611
1 TraesCS3B01G372300 chr3B 585138209 585139271 1062 True 1186 1186 87.1580 728 1795 1 chr3B.!!$R3 1067
2 TraesCS3B01G372300 chr3B 585022641 585023459 818 True 839 839 85.4610 968 1795 1 chr3B.!!$R2 827
3 TraesCS3B01G372300 chr3D 446073943 446076661 2718 True 1690 2859 87.4955 1 2612 2 chr3D.!!$R2 2611
4 TraesCS3B01G372300 chr3D 446191077 446191966 889 True 1048 1048 88.2220 737 1616 1 chr3D.!!$R1 879
5 TraesCS3B01G372300 chr3D 446109257 446110273 1016 True 550 992 89.5370 739 1795 2 chr3D.!!$R3 1056
6 TraesCS3B01G372300 chr3A 587883129 587885060 1931 True 2296 2296 88.4750 629 2557 1 chr3A.!!$R1 1928
7 TraesCS3B01G372300 chr3A 587905463 587906553 1090 True 1232 1232 87.2990 700 1795 1 chr3A.!!$R2 1095
8 TraesCS3B01G372300 chr3A 587965635 587966689 1054 True 1033 1033 84.7430 737 1796 1 chr3A.!!$R3 1059

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
493 514 0.396435 TGTCCTCCGTTGATGTGCTT 59.604 50.0 0.0 0.0 0.0 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2256 2515 0.033504 TGTGCACGTCTCTTCCCTTC 59.966 55.0 13.13 0.0 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.927668 TCAAAAAGAATCACCCTTTGAATTATC 57.072 29.630 0.00 0.00 37.92 1.75
29 30 9.933723 CAAAAAGAATCACCCTTTGAATTATCT 57.066 29.630 0.00 0.00 37.92 1.98
99 100 6.265577 AGAAAAATGTCCGTGTCTTTCAAAG 58.734 36.000 0.00 0.00 0.00 2.77
121 122 8.920665 CAAAGTTGTTTGTGTTTTGACATTCTA 58.079 29.630 0.00 0.00 38.64 2.10
124 125 8.519526 AGTTGTTTGTGTTTTGACATTCTAAGA 58.480 29.630 0.00 0.00 0.00 2.10
330 349 4.081917 GTGGGAAAAGACCAGTTTGACAAA 60.082 41.667 0.00 0.00 39.00 2.83
334 353 4.670896 AAAGACCAGTTTGACAAATGGG 57.329 40.909 22.47 19.31 37.13 4.00
374 393 1.095600 GCTTCCCGGGATTGAAGAAC 58.904 55.000 27.48 2.74 40.30 3.01
377 396 2.961531 TCCCGGGATTGAAGAACAAA 57.038 45.000 22.63 0.00 42.03 2.83
378 397 2.790433 TCCCGGGATTGAAGAACAAAG 58.210 47.619 22.63 0.00 42.03 2.77
451 472 7.444487 GGTTAGTGTGGTTCTCTCTAAACAAAT 59.556 37.037 0.00 0.00 31.25 2.32
462 483 9.601217 TTCTCTCTAAACAAATAGGTCATAAGC 57.399 33.333 0.00 0.00 0.00 3.09
464 485 9.606631 CTCTCTAAACAAATAGGTCATAAGCTT 57.393 33.333 3.48 3.48 34.40 3.74
465 486 9.383519 TCTCTAAACAAATAGGTCATAAGCTTG 57.616 33.333 9.86 0.00 34.40 4.01
474 495 4.579869 AGGTCATAAGCTTGATTCACGTT 58.420 39.130 9.86 0.00 0.00 3.99
476 497 4.154195 GGTCATAAGCTTGATTCACGTTGT 59.846 41.667 9.86 0.00 0.00 3.32
488 509 0.790207 CACGTTGTCCTCCGTTGATG 59.210 55.000 0.00 0.00 34.59 3.07
491 512 0.517316 GTTGTCCTCCGTTGATGTGC 59.483 55.000 0.00 0.00 0.00 4.57
493 514 0.396435 TGTCCTCCGTTGATGTGCTT 59.604 50.000 0.00 0.00 0.00 3.91
495 516 2.037902 TGTCCTCCGTTGATGTGCTTAA 59.962 45.455 0.00 0.00 0.00 1.85
503 524 4.201851 CCGTTGATGTGCTTAAGAGGATTG 60.202 45.833 6.67 0.00 0.00 2.67
504 525 4.393062 CGTTGATGTGCTTAAGAGGATTGT 59.607 41.667 6.67 0.00 0.00 2.71
512 533 3.556365 GCTTAAGAGGATTGTACCGAAGC 59.444 47.826 6.67 0.00 33.27 3.86
514 535 2.969628 AGAGGATTGTACCGAAGCAG 57.030 50.000 0.00 0.00 34.73 4.24
521 542 4.567159 GGATTGTACCGAAGCAGAAGTTAG 59.433 45.833 0.00 0.00 0.00 2.34
523 544 2.269172 GTACCGAAGCAGAAGTTAGCC 58.731 52.381 0.00 0.00 0.00 3.93
557 583 6.737720 AAGGGAAGAAAAGCTTTTTGATCT 57.262 33.333 24.58 14.69 36.83 2.75
563 589 6.324561 AGAAAAGCTTTTTGATCTCACCTC 57.675 37.500 24.58 8.26 0.00 3.85
564 590 5.242615 AGAAAAGCTTTTTGATCTCACCTCC 59.757 40.000 24.58 7.92 0.00 4.30
567 599 4.670765 AGCTTTTTGATCTCACCTCCATT 58.329 39.130 0.00 0.00 0.00 3.16
580 612 7.455058 TCTCACCTCCATTCTATACTAGTCTC 58.545 42.308 0.00 0.00 0.00 3.36
581 613 6.231951 TCACCTCCATTCTATACTAGTCTCG 58.768 44.000 0.00 0.00 0.00 4.04
582 614 5.998981 CACCTCCATTCTATACTAGTCTCGT 59.001 44.000 0.00 0.00 0.00 4.18
585 617 7.235193 ACCTCCATTCTATACTAGTCTCGTCTA 59.765 40.741 0.00 0.00 0.00 2.59
662 709 4.201822 GGTAACTTCGGTCTTTGCATCATC 60.202 45.833 0.00 0.00 0.00 2.92
683 730 0.796870 GCGGCCGAGTTTGTTATTGC 60.797 55.000 33.48 1.00 0.00 3.56
693 850 7.753580 GCCGAGTTTGTTATTGCTTTTTATAGT 59.246 33.333 0.00 0.00 0.00 2.12
811 974 2.145536 CAACATGCCTTTGCCTTTTCC 58.854 47.619 0.00 0.00 36.33 3.13
898 1067 1.972223 CACGGACTCGACCCTCAGT 60.972 63.158 0.00 0.00 40.11 3.41
974 1151 4.146075 GCTCTGGCGCTCTCAGCT 62.146 66.667 7.64 0.00 39.60 4.24
975 1152 2.104729 CTCTGGCGCTCTCAGCTC 59.895 66.667 7.64 0.00 39.60 4.09
976 1153 3.429080 CTCTGGCGCTCTCAGCTCC 62.429 68.421 7.64 0.00 45.96 4.70
1725 1931 1.546998 GGGGTTGGAATTGAGACCGTT 60.547 52.381 0.00 0.00 32.91 4.44
1735 1948 3.759527 TTGAGACCGTTAGAGTCGATG 57.240 47.619 0.00 0.00 39.31 3.84
1800 2013 3.305131 CGATGATGCCCTCCAAATCAATG 60.305 47.826 0.00 0.00 34.21 2.82
2034 2275 0.032952 TACGTGGCTTGCGAGTTTCT 59.967 50.000 0.00 0.00 0.00 2.52
2072 2313 1.589196 CGAAAGGGTCGGCGAGATC 60.589 63.158 11.20 2.69 46.45 2.75
2099 2340 2.091555 AGAGATCTAGACAGGGACACCC 60.092 54.545 0.00 0.00 45.90 4.61
2109 2350 2.363297 GGGACACCCTTTCTCGTCT 58.637 57.895 0.00 0.00 41.34 4.18
2111 2352 1.337917 GGGACACCCTTTCTCGTCTTC 60.338 57.143 0.00 0.00 41.34 2.87
2183 2430 4.481112 CCGGCTGCGTTTCCATGC 62.481 66.667 0.00 0.00 35.21 4.06
2251 2510 2.469465 TTTGCCGCCCTGGAGAAGAG 62.469 60.000 0.00 0.00 42.00 2.85
2252 2511 3.077556 GCCGCCCTGGAGAAGAGA 61.078 66.667 0.00 0.00 42.00 3.10
2253 2512 2.660064 GCCGCCCTGGAGAAGAGAA 61.660 63.158 0.00 0.00 42.00 2.87
2254 2513 1.519719 CCGCCCTGGAGAAGAGAAG 59.480 63.158 0.00 0.00 42.00 2.85
2255 2514 1.519719 CGCCCTGGAGAAGAGAAGG 59.480 63.158 0.00 0.00 0.00 3.46
2260 2519 1.836802 CCTGGAGAAGAGAAGGGAAGG 59.163 57.143 0.00 0.00 0.00 3.46
2279 2538 0.601558 GGAAGAGACGTGCACACCTA 59.398 55.000 18.64 0.00 0.00 3.08
2487 2750 1.237285 ACGATGCAGGTGTTTGCCTC 61.237 55.000 0.00 0.00 43.43 4.70
2557 2826 3.952967 GTCTGTCCTTCTCCTATAACCGT 59.047 47.826 0.00 0.00 0.00 4.83
2595 2864 2.800985 GCGGAAACTCCTATAACCGACC 60.801 54.545 0.00 0.00 42.40 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 5.828299 TGAAAGACACGGACATTTTTCTT 57.172 34.783 0.00 0.00 0.00 2.52
76 77 6.033966 ACTTTGAAAGACACGGACATTTTTC 58.966 36.000 12.53 0.00 0.00 2.29
99 100 8.682128 TCTTAGAATGTCAAAACACAAACAAC 57.318 30.769 0.00 0.00 38.48 3.32
306 325 2.032924 GTCAAACTGGTCTTTTCCCACG 59.967 50.000 0.00 0.00 0.00 4.94
309 328 4.729227 TTTGTCAAACTGGTCTTTTCCC 57.271 40.909 0.00 0.00 0.00 3.97
334 353 3.230522 CTGGTTTTGCTGGGCTGGC 62.231 63.158 0.00 0.00 0.00 4.85
361 380 5.689383 TCTTTCTTTGTTCTTCAATCCCG 57.311 39.130 0.00 0.00 35.84 5.14
362 381 7.716612 TCTTTCTTTCTTTGTTCTTCAATCCC 58.283 34.615 0.00 0.00 35.84 3.85
402 421 7.175104 ACCAATTAGGACATCTTAACACATGT 58.825 34.615 0.00 0.00 41.22 3.21
405 424 8.380099 ACTAACCAATTAGGACATCTTAACACA 58.620 33.333 1.54 0.00 41.98 3.72
422 443 6.681729 TTAGAGAGAACCACACTAACCAAT 57.318 37.500 0.00 0.00 0.00 3.16
451 472 5.339008 ACGTGAATCAAGCTTATGACCTA 57.661 39.130 0.00 0.00 30.82 3.08
462 483 1.726791 CGGAGGACAACGTGAATCAAG 59.273 52.381 0.00 0.00 0.00 3.02
464 485 0.677288 ACGGAGGACAACGTGAATCA 59.323 50.000 0.00 0.00 42.39 2.57
465 486 1.459592 CAACGGAGGACAACGTGAATC 59.540 52.381 0.00 0.00 43.31 2.52
474 495 0.396435 AAGCACATCAACGGAGGACA 59.604 50.000 0.00 0.00 0.00 4.02
476 497 2.565391 TCTTAAGCACATCAACGGAGGA 59.435 45.455 0.00 0.00 0.00 3.71
488 509 4.119442 TCGGTACAATCCTCTTAAGCAC 57.881 45.455 0.00 0.00 0.00 4.40
491 512 4.755411 TGCTTCGGTACAATCCTCTTAAG 58.245 43.478 0.00 0.00 0.00 1.85
493 514 4.021229 TCTGCTTCGGTACAATCCTCTTA 58.979 43.478 0.00 0.00 0.00 2.10
495 516 2.457598 TCTGCTTCGGTACAATCCTCT 58.542 47.619 0.00 0.00 0.00 3.69
503 524 2.094130 AGGCTAACTTCTGCTTCGGTAC 60.094 50.000 0.00 0.00 0.00 3.34
504 525 2.176889 AGGCTAACTTCTGCTTCGGTA 58.823 47.619 0.00 0.00 0.00 4.02
527 548 8.397906 CAAAAAGCTTTTCTTCCCTTAAAAAGG 58.602 33.333 24.04 0.00 40.34 3.11
528 549 9.161629 TCAAAAAGCTTTTCTTCCCTTAAAAAG 57.838 29.630 24.04 0.00 41.01 2.27
529 550 9.679661 ATCAAAAAGCTTTTCTTCCCTTAAAAA 57.320 25.926 24.04 0.00 32.88 1.94
530 551 9.325198 GATCAAAAAGCTTTTCTTCCCTTAAAA 57.675 29.630 24.04 1.11 32.88 1.52
531 552 8.704668 AGATCAAAAAGCTTTTCTTCCCTTAAA 58.295 29.630 24.04 0.50 32.88 1.52
532 553 8.250143 AGATCAAAAAGCTTTTCTTCCCTTAA 57.750 30.769 24.04 0.00 32.88 1.85
533 554 7.505585 TGAGATCAAAAAGCTTTTCTTCCCTTA 59.494 33.333 24.04 11.72 32.88 2.69
534 555 6.324770 TGAGATCAAAAAGCTTTTCTTCCCTT 59.675 34.615 24.04 4.58 32.88 3.95
538 559 6.743110 AGGTGAGATCAAAAAGCTTTTCTTC 58.257 36.000 24.04 18.96 32.88 2.87
539 560 6.239148 GGAGGTGAGATCAAAAAGCTTTTCTT 60.239 38.462 24.04 12.11 36.34 2.52
540 561 5.242615 GGAGGTGAGATCAAAAAGCTTTTCT 59.757 40.000 24.04 16.78 0.00 2.52
541 562 5.010012 TGGAGGTGAGATCAAAAAGCTTTTC 59.990 40.000 24.04 12.25 0.00 2.29
542 563 4.895297 TGGAGGTGAGATCAAAAAGCTTTT 59.105 37.500 18.74 18.74 0.00 2.27
543 564 4.473444 TGGAGGTGAGATCAAAAAGCTTT 58.527 39.130 5.69 5.69 0.00 3.51
544 565 4.104383 TGGAGGTGAGATCAAAAAGCTT 57.896 40.909 0.00 0.00 0.00 3.74
545 566 3.795688 TGGAGGTGAGATCAAAAAGCT 57.204 42.857 0.00 0.00 0.00 3.74
546 567 4.704057 AGAATGGAGGTGAGATCAAAAAGC 59.296 41.667 0.00 0.00 0.00 3.51
547 568 9.050601 GTATAGAATGGAGGTGAGATCAAAAAG 57.949 37.037 0.00 0.00 0.00 2.27
557 583 6.183361 ACGAGACTAGTATAGAATGGAGGTGA 60.183 42.308 4.54 0.00 42.77 4.02
563 589 7.332430 CCAGTAGACGAGACTAGTATAGAATGG 59.668 44.444 4.54 0.00 42.77 3.16
564 590 7.148540 GCCAGTAGACGAGACTAGTATAGAATG 60.149 44.444 4.54 0.00 42.77 2.67
567 599 5.303845 TGCCAGTAGACGAGACTAGTATAGA 59.696 44.000 4.54 0.00 42.77 1.98
580 612 3.600388 AGGAATTTTCTGCCAGTAGACG 58.400 45.455 0.00 0.00 0.00 4.18
581 613 3.942115 GGAGGAATTTTCTGCCAGTAGAC 59.058 47.826 0.00 0.00 0.00 2.59
582 614 3.846588 AGGAGGAATTTTCTGCCAGTAGA 59.153 43.478 0.00 0.00 0.00 2.59
585 617 4.657814 TTAGGAGGAATTTTCTGCCAGT 57.342 40.909 0.00 0.00 0.00 4.00
634 678 3.735591 CAAAGACCGAAGTTACCCTCAA 58.264 45.455 0.00 0.00 0.00 3.02
662 709 0.802494 AATAACAAACTCGGCCGCTG 59.198 50.000 23.51 18.32 0.00 5.18
693 850 9.678941 CTTATCATCGATTGTTTGCTAGTAGTA 57.321 33.333 0.00 0.00 0.00 1.82
694 851 8.414003 TCTTATCATCGATTGTTTGCTAGTAGT 58.586 33.333 0.00 0.00 0.00 2.73
695 852 8.803201 TCTTATCATCGATTGTTTGCTAGTAG 57.197 34.615 0.00 0.00 0.00 2.57
698 855 9.378597 CAAATCTTATCATCGATTGTTTGCTAG 57.621 33.333 0.00 0.00 30.76 3.42
811 974 2.027625 GAGAAACTGTCCACCCGCG 61.028 63.158 0.00 0.00 0.00 6.46
898 1067 4.196778 TCGCCCTGTTGGTTGGCA 62.197 61.111 0.00 0.00 45.63 4.92
973 1150 3.829601 AGTATCGATTAGGGCTCAAGGAG 59.170 47.826 1.71 0.00 0.00 3.69
974 1151 3.827302 GAGTATCGATTAGGGCTCAAGGA 59.173 47.826 1.71 0.00 0.00 3.36
975 1152 3.829601 AGAGTATCGATTAGGGCTCAAGG 59.170 47.826 1.71 0.00 42.67 3.61
976 1153 5.473846 TGTAGAGTATCGATTAGGGCTCAAG 59.526 44.000 1.71 0.00 42.67 3.02
1422 1622 1.798735 GTACACTACGCAGCTCCGA 59.201 57.895 2.80 0.00 0.00 4.55
1434 1634 2.396955 CCTCTCGCCGTCGTACACT 61.397 63.158 0.00 0.00 36.96 3.55
1463 1663 0.984961 CTCCTTGGGCCTGATCTCCA 60.985 60.000 4.53 0.00 0.00 3.86
1735 1948 1.645034 CCACACACACAGATCGATCC 58.355 55.000 21.66 4.34 0.00 3.36
1800 2013 8.502387 GCCATACTATAGTAGTACGTATATGCC 58.498 40.741 17.31 0.00 43.46 4.40
1890 2115 9.439500 AGCCGTATACAAAAGAACTGTTTATAA 57.561 29.630 3.32 0.00 0.00 0.98
2034 2275 2.283298 GCTCGAGAATCAAAGATGCCA 58.717 47.619 18.75 0.00 33.17 4.92
2072 2313 1.879380 CCTGTCTAGATCTCTCTGGCG 59.121 57.143 0.00 0.00 32.66 5.69
2099 2340 2.094957 AGCGGAAGAGAAGACGAGAAAG 60.095 50.000 0.00 0.00 0.00 2.62
2109 2350 0.949105 GCACGGAAAGCGGAAGAGAA 60.949 55.000 0.00 0.00 0.00 2.87
2111 2352 1.355066 GAGCACGGAAAGCGGAAGAG 61.355 60.000 0.00 0.00 37.01 2.85
2183 2430 2.859273 GATCCTGCCAGTCCACACCG 62.859 65.000 0.00 0.00 0.00 4.94
2251 2510 1.066787 CACGTCTCTTCCCTTCCCTTC 60.067 57.143 0.00 0.00 0.00 3.46
2252 2511 0.977395 CACGTCTCTTCCCTTCCCTT 59.023 55.000 0.00 0.00 0.00 3.95
2253 2512 1.545706 GCACGTCTCTTCCCTTCCCT 61.546 60.000 0.00 0.00 0.00 4.20
2254 2513 1.079057 GCACGTCTCTTCCCTTCCC 60.079 63.158 0.00 0.00 0.00 3.97
2255 2514 0.670854 GTGCACGTCTCTTCCCTTCC 60.671 60.000 0.00 0.00 0.00 3.46
2256 2515 0.033504 TGTGCACGTCTCTTCCCTTC 59.966 55.000 13.13 0.00 0.00 3.46
2257 2516 0.249911 GTGTGCACGTCTCTTCCCTT 60.250 55.000 13.13 0.00 0.00 3.95
2258 2517 1.367840 GTGTGCACGTCTCTTCCCT 59.632 57.895 13.13 0.00 0.00 4.20
2259 2518 1.668151 GGTGTGCACGTCTCTTCCC 60.668 63.158 13.13 0.00 0.00 3.97
2260 2519 0.601558 TAGGTGTGCACGTCTCTTCC 59.398 55.000 13.13 5.82 0.00 3.46
2487 2750 1.542492 AAATTCAGTGAGCCAGCCAG 58.458 50.000 0.00 0.00 0.00 4.85
2578 2847 3.450096 GTCAGGGTCGGTTATAGGAGTTT 59.550 47.826 0.00 0.00 0.00 2.66
2580 2849 2.664015 GTCAGGGTCGGTTATAGGAGT 58.336 52.381 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.