Multiple sequence alignment - TraesCS3B01G369800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G369800 | chr3B | 100.000 | 3892 | 0 | 0 | 1 | 3892 | 581905961 | 581909852 | 0.000000e+00 | 7188.0 |
1 | TraesCS3B01G369800 | chr3B | 95.815 | 693 | 27 | 2 | 3201 | 3892 | 812702456 | 812703147 | 0.000000e+00 | 1118.0 |
2 | TraesCS3B01G369800 | chr3B | 83.178 | 214 | 28 | 6 | 539 | 746 | 800141581 | 800141792 | 5.130000e-44 | 189.0 |
3 | TraesCS3B01G369800 | chr3B | 97.647 | 85 | 0 | 2 | 3061 | 3145 | 751981570 | 751981488 | 1.130000e-30 | 145.0 |
4 | TraesCS3B01G369800 | chr3D | 91.304 | 1219 | 61 | 16 | 811 | 1998 | 443722985 | 443724189 | 0.000000e+00 | 1622.0 |
5 | TraesCS3B01G369800 | chr3D | 95.815 | 693 | 27 | 2 | 3201 | 3892 | 134085178 | 134084487 | 0.000000e+00 | 1118.0 |
6 | TraesCS3B01G369800 | chr3D | 92.027 | 602 | 24 | 11 | 2001 | 2595 | 443724283 | 443724867 | 0.000000e+00 | 824.0 |
7 | TraesCS3B01G369800 | chr3D | 93.127 | 291 | 16 | 1 | 2610 | 2900 | 443725240 | 443725526 | 1.290000e-114 | 424.0 |
8 | TraesCS3B01G369800 | chr3D | 90.805 | 87 | 8 | 0 | 2962 | 3048 | 443727574 | 443727660 | 2.460000e-22 | 117.0 |
9 | TraesCS3B01G369800 | chr3D | 97.297 | 37 | 1 | 0 | 2932 | 2968 | 443725729 | 443725765 | 3.250000e-06 | 63.9 |
10 | TraesCS3B01G369800 | chr3A | 89.012 | 1083 | 62 | 24 | 793 | 1866 | 584954737 | 584955771 | 0.000000e+00 | 1288.0 |
11 | TraesCS3B01G369800 | chr3A | 89.565 | 920 | 50 | 22 | 2001 | 2900 | 584956610 | 584957503 | 0.000000e+00 | 1125.0 |
12 | TraesCS3B01G369800 | chr3A | 85.870 | 828 | 66 | 13 | 2 | 791 | 584953606 | 584954420 | 0.000000e+00 | 833.0 |
13 | TraesCS3B01G369800 | chr3A | 96.429 | 140 | 2 | 1 | 1856 | 1995 | 584956126 | 584956262 | 1.090000e-55 | 228.0 |
14 | TraesCS3B01G369800 | chr3A | 84.106 | 151 | 22 | 2 | 647 | 796 | 646133246 | 646133395 | 1.130000e-30 | 145.0 |
15 | TraesCS3B01G369800 | chr3A | 96.875 | 32 | 1 | 0 | 143 | 174 | 1212220 | 1212189 | 2.000000e-03 | 54.7 |
16 | TraesCS3B01G369800 | chr3A | 96.774 | 31 | 1 | 0 | 147 | 177 | 1242668 | 1242638 | 7.000000e-03 | 52.8 |
17 | TraesCS3B01G369800 | chr3A | 96.774 | 31 | 1 | 0 | 147 | 177 | 1255011 | 1254981 | 7.000000e-03 | 52.8 |
18 | TraesCS3B01G369800 | chr1B | 96.248 | 693 | 24 | 2 | 3201 | 3892 | 584600079 | 584600770 | 0.000000e+00 | 1134.0 |
19 | TraesCS3B01G369800 | chr1B | 95.815 | 693 | 26 | 3 | 3201 | 3892 | 520360478 | 520359788 | 0.000000e+00 | 1116.0 |
20 | TraesCS3B01G369800 | chr1B | 85.000 | 280 | 39 | 3 | 513 | 789 | 512979580 | 512979859 | 8.230000e-72 | 281.0 |
21 | TraesCS3B01G369800 | chr5D | 96.104 | 693 | 26 | 1 | 3201 | 3892 | 76232745 | 76233437 | 0.000000e+00 | 1129.0 |
22 | TraesCS3B01G369800 | chr5D | 95.815 | 693 | 27 | 2 | 3201 | 3892 | 398866409 | 398867100 | 0.000000e+00 | 1118.0 |
23 | TraesCS3B01G369800 | chr7D | 95.960 | 693 | 27 | 1 | 3201 | 3892 | 205948197 | 205948889 | 0.000000e+00 | 1123.0 |
24 | TraesCS3B01G369800 | chr7D | 96.277 | 188 | 7 | 0 | 1385 | 1572 | 549769248 | 549769435 | 3.780000e-80 | 309.0 |
25 | TraesCS3B01G369800 | chr7D | 83.766 | 308 | 27 | 9 | 912 | 1214 | 94649668 | 94649957 | 1.780000e-68 | 270.0 |
26 | TraesCS3B01G369800 | chr7D | 80.970 | 268 | 46 | 5 | 528 | 794 | 8995766 | 8995503 | 1.420000e-49 | 207.0 |
27 | TraesCS3B01G369800 | chr7D | 96.040 | 101 | 4 | 0 | 1050 | 1150 | 549768784 | 549768884 | 8.650000e-37 | 165.0 |
28 | TraesCS3B01G369800 | chr7D | 96.552 | 87 | 2 | 1 | 3061 | 3146 | 486627960 | 486628046 | 4.050000e-30 | 143.0 |
29 | TraesCS3B01G369800 | chr1D | 95.671 | 693 | 29 | 1 | 3201 | 3892 | 41769533 | 41770225 | 0.000000e+00 | 1112.0 |
30 | TraesCS3B01G369800 | chr1D | 95.671 | 693 | 29 | 1 | 3201 | 3892 | 268477273 | 268477965 | 0.000000e+00 | 1112.0 |
31 | TraesCS3B01G369800 | chr1D | 98.810 | 84 | 0 | 1 | 3061 | 3144 | 283582823 | 283582905 | 8.710000e-32 | 148.0 |
32 | TraesCS3B01G369800 | chr1D | 79.739 | 153 | 23 | 6 | 212 | 361 | 464401738 | 464401591 | 1.910000e-18 | 104.0 |
33 | TraesCS3B01G369800 | chr6D | 81.985 | 1038 | 151 | 25 | 976 | 1998 | 427229751 | 427230767 | 0.000000e+00 | 848.0 |
34 | TraesCS3B01G369800 | chr6D | 95.213 | 188 | 9 | 0 | 1385 | 1572 | 469343131 | 469342944 | 8.180000e-77 | 298.0 |
35 | TraesCS3B01G369800 | chr6D | 97.030 | 101 | 3 | 0 | 1050 | 1150 | 469343626 | 469343526 | 1.860000e-38 | 171.0 |
36 | TraesCS3B01G369800 | chr6D | 100.000 | 80 | 0 | 0 | 3061 | 3140 | 140998124 | 140998203 | 8.710000e-32 | 148.0 |
37 | TraesCS3B01G369800 | chr6D | 91.781 | 73 | 6 | 0 | 1194 | 1266 | 469343294 | 469343222 | 6.880000e-18 | 102.0 |
38 | TraesCS3B01G369800 | chr6A | 81.956 | 726 | 102 | 14 | 976 | 1692 | 571928209 | 571928914 | 4.330000e-164 | 588.0 |
39 | TraesCS3B01G369800 | chr6B | 81.706 | 727 | 102 | 16 | 976 | 1692 | 643164480 | 643165185 | 9.380000e-161 | 577.0 |
40 | TraesCS3B01G369800 | chr6B | 84.000 | 200 | 31 | 1 | 593 | 791 | 709563114 | 709563313 | 1.430000e-44 | 191.0 |
41 | TraesCS3B01G369800 | chr4D | 96.809 | 188 | 6 | 0 | 1385 | 1572 | 463693724 | 463693911 | 8.120000e-82 | 315.0 |
42 | TraesCS3B01G369800 | chr4D | 98.795 | 83 | 1 | 0 | 3061 | 3143 | 507164705 | 507164787 | 8.710000e-32 | 148.0 |
43 | TraesCS3B01G369800 | chr4D | 81.098 | 164 | 29 | 1 | 212 | 375 | 336131579 | 336131418 | 3.160000e-26 | 130.0 |
44 | TraesCS3B01G369800 | chr4D | 93.151 | 73 | 5 | 0 | 1194 | 1266 | 463693615 | 463693687 | 1.480000e-19 | 108.0 |
45 | TraesCS3B01G369800 | chr4D | 87.719 | 57 | 7 | 0 | 233 | 289 | 371135667 | 371135723 | 2.510000e-07 | 67.6 |
46 | TraesCS3B01G369800 | chr2B | 95.213 | 188 | 9 | 0 | 1385 | 1572 | 767953185 | 767952998 | 8.180000e-77 | 298.0 |
47 | TraesCS3B01G369800 | chr2B | 84.644 | 267 | 38 | 3 | 528 | 791 | 519693879 | 519694145 | 2.980000e-66 | 263.0 |
48 | TraesCS3B01G369800 | chr2B | 96.364 | 110 | 2 | 2 | 1050 | 1159 | 767953375 | 767953268 | 3.090000e-41 | 180.0 |
49 | TraesCS3B01G369800 | chr2B | 81.818 | 121 | 18 | 4 | 211 | 330 | 657302376 | 657302493 | 8.900000e-17 | 99.0 |
50 | TraesCS3B01G369800 | chr5B | 84.674 | 261 | 36 | 4 | 539 | 796 | 535696250 | 535695991 | 1.390000e-64 | 257.0 |
51 | TraesCS3B01G369800 | chr5B | 84.577 | 201 | 31 | 0 | 583 | 783 | 422559479 | 422559279 | 2.370000e-47 | 200.0 |
52 | TraesCS3B01G369800 | chr5B | 92.553 | 94 | 4 | 2 | 3061 | 3153 | 557264909 | 557264818 | 8.770000e-27 | 132.0 |
53 | TraesCS3B01G369800 | chr5B | 83.562 | 146 | 17 | 5 | 211 | 355 | 520902497 | 520902358 | 3.160000e-26 | 130.0 |
54 | TraesCS3B01G369800 | chr2D | 84.706 | 255 | 36 | 3 | 539 | 791 | 24221289 | 24221036 | 6.460000e-63 | 252.0 |
55 | TraesCS3B01G369800 | chr7B | 94.792 | 96 | 5 | 0 | 3059 | 3154 | 713590331 | 713590236 | 2.420000e-32 | 150.0 |
56 | TraesCS3B01G369800 | chr2A | 97.674 | 86 | 2 | 0 | 3061 | 3146 | 630090986 | 630090901 | 8.710000e-32 | 148.0 |
57 | TraesCS3B01G369800 | chr2A | 91.000 | 100 | 7 | 2 | 3061 | 3160 | 385904608 | 385904511 | 2.440000e-27 | 134.0 |
58 | TraesCS3B01G369800 | chr1A | 80.102 | 196 | 33 | 6 | 513 | 705 | 530722698 | 530722890 | 1.460000e-29 | 141.0 |
59 | TraesCS3B01G369800 | chr1A | 79.856 | 139 | 24 | 4 | 213 | 350 | 585627064 | 585626929 | 8.900000e-17 | 99.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G369800 | chr3B | 581905961 | 581909852 | 3891 | False | 7188.00 | 7188 | 100.0000 | 1 | 3892 | 1 | chr3B.!!$F1 | 3891 |
1 | TraesCS3B01G369800 | chr3B | 812702456 | 812703147 | 691 | False | 1118.00 | 1118 | 95.8150 | 3201 | 3892 | 1 | chr3B.!!$F3 | 691 |
2 | TraesCS3B01G369800 | chr3D | 134084487 | 134085178 | 691 | True | 1118.00 | 1118 | 95.8150 | 3201 | 3892 | 1 | chr3D.!!$R1 | 691 |
3 | TraesCS3B01G369800 | chr3D | 443722985 | 443727660 | 4675 | False | 610.18 | 1622 | 92.9120 | 811 | 3048 | 5 | chr3D.!!$F1 | 2237 |
4 | TraesCS3B01G369800 | chr3A | 584953606 | 584957503 | 3897 | False | 868.50 | 1288 | 90.2190 | 2 | 2900 | 4 | chr3A.!!$F2 | 2898 |
5 | TraesCS3B01G369800 | chr1B | 584600079 | 584600770 | 691 | False | 1134.00 | 1134 | 96.2480 | 3201 | 3892 | 1 | chr1B.!!$F2 | 691 |
6 | TraesCS3B01G369800 | chr1B | 520359788 | 520360478 | 690 | True | 1116.00 | 1116 | 95.8150 | 3201 | 3892 | 1 | chr1B.!!$R1 | 691 |
7 | TraesCS3B01G369800 | chr5D | 76232745 | 76233437 | 692 | False | 1129.00 | 1129 | 96.1040 | 3201 | 3892 | 1 | chr5D.!!$F1 | 691 |
8 | TraesCS3B01G369800 | chr5D | 398866409 | 398867100 | 691 | False | 1118.00 | 1118 | 95.8150 | 3201 | 3892 | 1 | chr5D.!!$F2 | 691 |
9 | TraesCS3B01G369800 | chr7D | 205948197 | 205948889 | 692 | False | 1123.00 | 1123 | 95.9600 | 3201 | 3892 | 1 | chr7D.!!$F2 | 691 |
10 | TraesCS3B01G369800 | chr7D | 549768784 | 549769435 | 651 | False | 237.00 | 309 | 96.1585 | 1050 | 1572 | 2 | chr7D.!!$F4 | 522 |
11 | TraesCS3B01G369800 | chr1D | 41769533 | 41770225 | 692 | False | 1112.00 | 1112 | 95.6710 | 3201 | 3892 | 1 | chr1D.!!$F1 | 691 |
12 | TraesCS3B01G369800 | chr1D | 268477273 | 268477965 | 692 | False | 1112.00 | 1112 | 95.6710 | 3201 | 3892 | 1 | chr1D.!!$F2 | 691 |
13 | TraesCS3B01G369800 | chr6D | 427229751 | 427230767 | 1016 | False | 848.00 | 848 | 81.9850 | 976 | 1998 | 1 | chr6D.!!$F2 | 1022 |
14 | TraesCS3B01G369800 | chr6A | 571928209 | 571928914 | 705 | False | 588.00 | 588 | 81.9560 | 976 | 1692 | 1 | chr6A.!!$F1 | 716 |
15 | TraesCS3B01G369800 | chr6B | 643164480 | 643165185 | 705 | False | 577.00 | 577 | 81.7060 | 976 | 1692 | 1 | chr6B.!!$F1 | 716 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
896 | 1250 | 0.179108 | GAGCCGACGACCTAGCATTT | 60.179 | 55.0 | 0.00 | 0.0 | 0.0 | 2.32 | F |
991 | 1352 | 0.250234 | CAACCATGGAGAAGAGCGGA | 59.750 | 55.0 | 21.47 | 0.0 | 0.0 | 5.54 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1916 | 2881 | 0.323633 | CAATCAGGCACCATCCACCA | 60.324 | 55.0 | 0.0 | 0.0 | 0.00 | 4.17 | R |
2901 | 4598 | 0.035056 | GCACATGCTCACCCCTAACT | 60.035 | 55.0 | 0.0 | 0.0 | 38.21 | 2.24 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
240 | 241 | 4.348863 | AAGTCTCAGTCAGCTGACATTT | 57.651 | 40.909 | 40.25 | 23.43 | 45.94 | 2.32 |
260 | 261 | 6.535150 | ACATTTCGTTATGTCTCAATCGATGT | 59.465 | 34.615 | 0.00 | 0.00 | 33.58 | 3.06 |
285 | 286 | 9.252962 | GTTATATTCCTTTGATTTTGCATGGAG | 57.747 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
295 | 296 | 7.172868 | TGATTTTGCATGGAGATTTGTACAT | 57.827 | 32.000 | 0.00 | 0.00 | 0.00 | 2.29 |
296 | 297 | 7.613585 | TGATTTTGCATGGAGATTTGTACATT | 58.386 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
298 | 299 | 8.851541 | ATTTTGCATGGAGATTTGTACATTTT | 57.148 | 26.923 | 0.00 | 0.00 | 0.00 | 1.82 |
367 | 368 | 7.784470 | ACTTGAGTGAGACTAGGTTAAATCT | 57.216 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
380 | 381 | 7.921745 | ACTAGGTTAAATCTCAGTCGATTTAGC | 59.078 | 37.037 | 9.97 | 9.97 | 43.10 | 3.09 |
381 | 382 | 6.640518 | AGGTTAAATCTCAGTCGATTTAGCA | 58.359 | 36.000 | 16.39 | 0.51 | 43.21 | 3.49 |
415 | 432 | 2.522185 | TCACGAGTTTACCTAGCCACT | 58.478 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
433 | 450 | 7.170393 | AGCCACTCCCTTTTTAAATATTCAC | 57.830 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
437 | 454 | 7.120726 | CCACTCCCTTTTTAAATATTCACGAGT | 59.879 | 37.037 | 0.00 | 0.00 | 0.00 | 4.18 |
439 | 456 | 8.512138 | ACTCCCTTTTTAAATATTCACGAGTTG | 58.488 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
454 | 472 | 9.787532 | ATTCACGAGTTGTAAAAATATTCATGG | 57.212 | 29.630 | 0.00 | 0.00 | 0.00 | 3.66 |
563 | 600 | 7.645402 | ACAGTACCGTGATTTAAAAAGGAAAG | 58.355 | 34.615 | 0.00 | 0.00 | 0.00 | 2.62 |
564 | 601 | 7.499895 | ACAGTACCGTGATTTAAAAAGGAAAGA | 59.500 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
566 | 603 | 8.565416 | AGTACCGTGATTTAAAAAGGAAAGAAG | 58.435 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
569 | 606 | 7.919091 | ACCGTGATTTAAAAAGGAAAGAAGTTC | 59.081 | 33.333 | 0.00 | 0.00 | 35.28 | 3.01 |
570 | 607 | 7.918562 | CCGTGATTTAAAAAGGAAAGAAGTTCA | 59.081 | 33.333 | 5.50 | 0.00 | 38.06 | 3.18 |
610 | 648 | 3.238232 | GTGCAAGATGCTCCTGTCA | 57.762 | 52.632 | 3.78 | 0.00 | 45.31 | 3.58 |
614 | 652 | 2.290450 | TGCAAGATGCTCCTGTCATGAA | 60.290 | 45.455 | 0.00 | 0.00 | 45.31 | 2.57 |
623 | 661 | 0.320683 | CCTGTCATGAACTCCGTGCA | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
635 | 673 | 3.705604 | ACTCCGTGCAAAATTTTGTGAG | 58.294 | 40.909 | 27.13 | 25.41 | 40.24 | 3.51 |
653 | 691 | 2.290896 | TGAGGTTTGGCCATTCGAGAAT | 60.291 | 45.455 | 6.09 | 0.00 | 40.61 | 2.40 |
654 | 692 | 2.094675 | AGGTTTGGCCATTCGAGAATG | 58.905 | 47.619 | 6.09 | 16.54 | 45.77 | 2.67 |
688 | 727 | 2.549754 | AGACAAAATCAGGCGTGAACTG | 59.450 | 45.455 | 13.87 | 12.60 | 35.88 | 3.16 |
698 | 737 | 1.599419 | GGCGTGAACTGTGCGATTTTT | 60.599 | 47.619 | 0.00 | 0.00 | 0.00 | 1.94 |
707 | 746 | 7.630606 | GTGAACTGTGCGATTTTTAAAAGTTTG | 59.369 | 33.333 | 0.14 | 0.00 | 0.00 | 2.93 |
709 | 748 | 7.216920 | ACTGTGCGATTTTTAAAAGTTTGTC | 57.783 | 32.000 | 0.14 | 0.00 | 0.00 | 3.18 |
717 | 756 | 8.690840 | CGATTTTTAAAAGTTTGTCAGACATCC | 58.309 | 33.333 | 3.45 | 0.00 | 0.00 | 3.51 |
723 | 762 | 7.504924 | AAAAGTTTGTCAGACATCCGAAATA | 57.495 | 32.000 | 3.45 | 0.00 | 0.00 | 1.40 |
727 | 766 | 6.655003 | AGTTTGTCAGACATCCGAAATATGTT | 59.345 | 34.615 | 3.45 | 0.00 | 37.69 | 2.71 |
747 | 786 | 0.465460 | TTTTGTGCCACGAGCTCCTT | 60.465 | 50.000 | 8.47 | 0.00 | 44.23 | 3.36 |
754 | 793 | 1.813513 | CCACGAGCTCCTTGAATGTT | 58.186 | 50.000 | 8.47 | 0.00 | 0.00 | 2.71 |
778 | 817 | 2.726633 | ACTTCACAAAATTTCGCACGG | 58.273 | 42.857 | 0.00 | 0.00 | 0.00 | 4.94 |
786 | 825 | 0.511221 | AATTTCGCACGGAGTTCACG | 59.489 | 50.000 | 0.00 | 0.00 | 41.61 | 4.35 |
791 | 830 | 2.928361 | CACGGAGTTCACGCACAC | 59.072 | 61.111 | 0.00 | 0.00 | 41.61 | 3.82 |
794 | 833 | 1.947146 | CGGAGTTCACGCACACGAA | 60.947 | 57.895 | 0.00 | 0.00 | 43.93 | 3.85 |
804 | 1158 | 0.433492 | CGCACACGAAGTTAGAACGG | 59.567 | 55.000 | 0.00 | 0.00 | 41.61 | 4.44 |
809 | 1163 | 0.387750 | ACGAAGTTAGAACGGGTCGC | 60.388 | 55.000 | 12.84 | 0.00 | 37.78 | 5.19 |
850 | 1204 | 5.749596 | TGACAAAACATTCGATGTCACTT | 57.250 | 34.783 | 12.08 | 0.00 | 45.14 | 3.16 |
896 | 1250 | 0.179108 | GAGCCGACGACCTAGCATTT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
991 | 1352 | 0.250234 | CAACCATGGAGAAGAGCGGA | 59.750 | 55.000 | 21.47 | 0.00 | 0.00 | 5.54 |
1017 | 1378 | 4.669809 | ATGGCGTTTTGGGGCGGA | 62.670 | 61.111 | 0.00 | 0.00 | 0.00 | 5.54 |
1079 | 1444 | 3.186047 | GCGCCGCGTGTATGACTT | 61.186 | 61.111 | 15.34 | 0.00 | 0.00 | 3.01 |
1313 | 1894 | 2.778299 | AGTTTCATACGAGGCAGCAAA | 58.222 | 42.857 | 0.00 | 0.00 | 0.00 | 3.68 |
1326 | 1907 | 2.914838 | GGCAGCAAAAGTAAACGCATAC | 59.085 | 45.455 | 0.00 | 0.00 | 0.00 | 2.39 |
1327 | 1908 | 3.365969 | GGCAGCAAAAGTAAACGCATACT | 60.366 | 43.478 | 0.00 | 0.00 | 37.73 | 2.12 |
1328 | 1909 | 3.846335 | GCAGCAAAAGTAAACGCATACTC | 59.154 | 43.478 | 1.64 | 0.00 | 35.09 | 2.59 |
1329 | 1910 | 4.403453 | CAGCAAAAGTAAACGCATACTCC | 58.597 | 43.478 | 1.64 | 0.00 | 35.09 | 3.85 |
1415 | 2000 | 4.994201 | GGCGACGTCGTGCTCACA | 62.994 | 66.667 | 35.48 | 0.00 | 42.22 | 3.58 |
1448 | 2033 | 2.094545 | CCACGCCATCGAGATCATGATA | 60.095 | 50.000 | 8.54 | 0.00 | 39.41 | 2.15 |
1557 | 2142 | 1.002087 | AGTTCCGGCACTTCGATCTTT | 59.998 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
1695 | 2280 | 1.350019 | ACCACTTGGCCAAGGTAGTAC | 59.650 | 52.381 | 41.04 | 0.00 | 42.53 | 2.73 |
1697 | 2282 | 1.001633 | CACTTGGCCAAGGTAGTACGT | 59.998 | 52.381 | 41.04 | 21.37 | 42.53 | 3.57 |
1714 | 2299 | 6.364945 | AGTACGTATCTACCTTAAACGGTC | 57.635 | 41.667 | 0.00 | 0.00 | 38.49 | 4.79 |
1715 | 2300 | 5.880332 | AGTACGTATCTACCTTAAACGGTCA | 59.120 | 40.000 | 0.00 | 0.00 | 38.49 | 4.02 |
1840 | 2440 | 2.625823 | CGGCCATTGCGTCTTTGGT | 61.626 | 57.895 | 2.24 | 0.00 | 38.85 | 3.67 |
1916 | 2881 | 2.586792 | GAGGCATCTCCAAGCGGT | 59.413 | 61.111 | 0.00 | 0.00 | 37.29 | 5.68 |
1932 | 2897 | 2.756400 | GTGGTGGATGGTGCCTGA | 59.244 | 61.111 | 0.00 | 0.00 | 0.00 | 3.86 |
1998 | 2963 | 3.087031 | TCAGGGACAAGAAGGTACGTAG | 58.913 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1999 | 2964 | 1.823610 | AGGGACAAGAAGGTACGTAGC | 59.176 | 52.381 | 16.85 | 16.85 | 0.00 | 3.58 |
2000 | 2965 | 1.547372 | GGGACAAGAAGGTACGTAGCA | 59.453 | 52.381 | 25.28 | 0.00 | 0.00 | 3.49 |
2003 | 2968 | 1.881973 | ACAAGAAGGTACGTAGCACGA | 59.118 | 47.619 | 25.28 | 0.00 | 46.05 | 4.35 |
2004 | 2969 | 2.248487 | CAAGAAGGTACGTAGCACGAC | 58.752 | 52.381 | 25.28 | 13.23 | 46.05 | 4.34 |
2008 | 3324 | 1.138247 | GGTACGTAGCACGACCCAG | 59.862 | 63.158 | 19.43 | 0.00 | 46.05 | 4.45 |
2026 | 3342 | 2.322161 | CAGCTTTCAAGTGGCGAATTG | 58.678 | 47.619 | 2.20 | 2.20 | 0.00 | 2.32 |
2044 | 3360 | 2.131776 | TGAATCTGGTCATGCATGCA | 57.868 | 45.000 | 25.04 | 25.04 | 0.00 | 3.96 |
2045 | 3361 | 2.661718 | TGAATCTGGTCATGCATGCAT | 58.338 | 42.857 | 27.46 | 27.46 | 37.08 | 3.96 |
2059 | 3375 | 4.401202 | ATGCATGCATGACATCTGAAAGAA | 59.599 | 37.500 | 31.74 | 0.00 | 40.30 | 2.52 |
2191 | 3521 | 3.166489 | AGTATCAGCGCTGGTAGTTTC | 57.834 | 47.619 | 35.36 | 20.89 | 0.00 | 2.78 |
2210 | 3540 | 2.048222 | CTCTCAGCGCCGTGGAAA | 60.048 | 61.111 | 2.29 | 0.00 | 0.00 | 3.13 |
2211 | 3541 | 1.448540 | CTCTCAGCGCCGTGGAAAT | 60.449 | 57.895 | 2.29 | 0.00 | 0.00 | 2.17 |
2212 | 3542 | 0.179111 | CTCTCAGCGCCGTGGAAATA | 60.179 | 55.000 | 2.29 | 0.00 | 0.00 | 1.40 |
2213 | 3543 | 0.464036 | TCTCAGCGCCGTGGAAATAT | 59.536 | 50.000 | 2.29 | 0.00 | 0.00 | 1.28 |
2253 | 3583 | 2.516227 | TACCCCAAATCATCGCCAAA | 57.484 | 45.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2265 | 3595 | 0.886938 | TCGCCAAAACGGATGAAGCA | 60.887 | 50.000 | 0.00 | 0.00 | 36.56 | 3.91 |
2399 | 3729 | 0.037303 | ATGGTGAAGCTGGACCTGTG | 59.963 | 55.000 | 14.05 | 0.00 | 32.98 | 3.66 |
2475 | 3805 | 0.039618 | AATCCGTGGTCATTTGCCCT | 59.960 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2515 | 3845 | 5.823209 | TCATGCATTGGACTTATCAACTG | 57.177 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
2517 | 3847 | 6.413892 | TCATGCATTGGACTTATCAACTGTA | 58.586 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2519 | 3849 | 5.555966 | TGCATTGGACTTATCAACTGTACA | 58.444 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
2520 | 3850 | 5.643348 | TGCATTGGACTTATCAACTGTACAG | 59.357 | 40.000 | 21.44 | 21.44 | 0.00 | 2.74 |
2522 | 3852 | 6.816640 | GCATTGGACTTATCAACTGTACAGTA | 59.183 | 38.462 | 28.13 | 14.72 | 41.58 | 2.74 |
2523 | 3853 | 7.495934 | GCATTGGACTTATCAACTGTACAGTAT | 59.504 | 37.037 | 28.13 | 20.40 | 41.58 | 2.12 |
2524 | 3854 | 9.383519 | CATTGGACTTATCAACTGTACAGTATT | 57.616 | 33.333 | 28.13 | 17.43 | 41.58 | 1.89 |
2526 | 3856 | 9.865321 | TTGGACTTATCAACTGTACAGTATTAC | 57.135 | 33.333 | 28.13 | 8.46 | 41.58 | 1.89 |
2527 | 3857 | 9.027202 | TGGACTTATCAACTGTACAGTATTACA | 57.973 | 33.333 | 28.13 | 10.93 | 41.58 | 2.41 |
2536 | 3866 | 7.307493 | ACTGTACAGTATTACATGCATTGTG | 57.693 | 36.000 | 26.91 | 0.00 | 40.43 | 3.33 |
2539 | 3869 | 5.239359 | ACAGTATTACATGCATTGTGCTG | 57.761 | 39.130 | 0.00 | 5.30 | 45.31 | 4.41 |
2540 | 3870 | 4.039703 | CAGTATTACATGCATTGTGCTGC | 58.960 | 43.478 | 0.00 | 0.00 | 45.31 | 5.25 |
2589 | 3920 | 7.678194 | AACTTGTTTTGACATCGTTTACATG | 57.322 | 32.000 | 0.00 | 0.00 | 0.00 | 3.21 |
2595 | 3926 | 2.297701 | GACATCGTTTACATGGCCCAT | 58.702 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
2598 | 3929 | 1.745232 | TCGTTTACATGGCCCATGAC | 58.255 | 50.000 | 29.99 | 16.31 | 43.81 | 3.06 |
2599 | 3930 | 1.280710 | TCGTTTACATGGCCCATGACT | 59.719 | 47.619 | 29.99 | 11.34 | 43.81 | 3.41 |
2602 | 3933 | 3.250762 | CGTTTACATGGCCCATGACTATG | 59.749 | 47.826 | 29.99 | 14.38 | 43.81 | 2.23 |
2603 | 3934 | 4.207165 | GTTTACATGGCCCATGACTATGT | 58.793 | 43.478 | 29.99 | 10.69 | 43.81 | 2.29 |
2605 | 3936 | 2.658285 | ACATGGCCCATGACTATGTTG | 58.342 | 47.619 | 29.99 | 1.83 | 43.81 | 3.33 |
2607 | 3938 | 3.201930 | ACATGGCCCATGACTATGTTGTA | 59.798 | 43.478 | 29.99 | 0.00 | 43.81 | 2.41 |
2608 | 3939 | 4.206375 | CATGGCCCATGACTATGTTGTAA | 58.794 | 43.478 | 19.32 | 0.00 | 43.81 | 2.41 |
2654 | 4343 | 5.181748 | CAAACCTCTTCCTTCCATAGTCTG | 58.818 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
2703 | 4400 | 2.311542 | TGGGGTATCTGCTGGTTCAATT | 59.688 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
2704 | 4401 | 3.525609 | TGGGGTATCTGCTGGTTCAATTA | 59.474 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
2705 | 4402 | 3.883489 | GGGGTATCTGCTGGTTCAATTAC | 59.117 | 47.826 | 0.00 | 0.00 | 0.00 | 1.89 |
2706 | 4403 | 3.560068 | GGGTATCTGCTGGTTCAATTACG | 59.440 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
2774 | 4471 | 0.247736 | GCACTACAGGGAGTGGACTG | 59.752 | 60.000 | 13.29 | 0.00 | 45.85 | 3.51 |
2807 | 4504 | 0.654160 | GGCTCCGTATTACGTTTGCC | 59.346 | 55.000 | 20.29 | 20.29 | 40.58 | 4.52 |
2861 | 4558 | 2.550180 | GAGGGTCAAGTCTTTCTGCAAC | 59.450 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2900 | 4597 | 7.547370 | GCTAAGGAGGTGAAGTAATATATGCAG | 59.453 | 40.741 | 0.00 | 0.00 | 0.00 | 4.41 |
2901 | 4598 | 7.618019 | AAGGAGGTGAAGTAATATATGCAGA | 57.382 | 36.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2902 | 4599 | 7.238486 | AGGAGGTGAAGTAATATATGCAGAG | 57.762 | 40.000 | 0.00 | 0.00 | 0.00 | 3.35 |
2903 | 4600 | 6.784969 | AGGAGGTGAAGTAATATATGCAGAGT | 59.215 | 38.462 | 0.00 | 0.00 | 0.00 | 3.24 |
2905 | 4602 | 8.585881 | GGAGGTGAAGTAATATATGCAGAGTTA | 58.414 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
2906 | 4603 | 9.632807 | GAGGTGAAGTAATATATGCAGAGTTAG | 57.367 | 37.037 | 0.00 | 0.00 | 0.00 | 2.34 |
2926 | 4644 | 0.675633 | GGGTGAGCATGTGCAACTTT | 59.324 | 50.000 | 7.83 | 0.00 | 45.16 | 2.66 |
2927 | 4645 | 1.603678 | GGGTGAGCATGTGCAACTTTG | 60.604 | 52.381 | 7.83 | 0.00 | 45.16 | 2.77 |
2928 | 4646 | 1.067516 | GGTGAGCATGTGCAACTTTGT | 59.932 | 47.619 | 7.83 | 0.00 | 45.16 | 2.83 |
2929 | 4647 | 2.481795 | GGTGAGCATGTGCAACTTTGTT | 60.482 | 45.455 | 7.83 | 0.00 | 45.16 | 2.83 |
2930 | 4648 | 2.536803 | GTGAGCATGTGCAACTTTGTTG | 59.463 | 45.455 | 7.83 | 6.12 | 45.16 | 3.33 |
2931 | 4649 | 1.523934 | GAGCATGTGCAACTTTGTTGC | 59.476 | 47.619 | 23.43 | 23.43 | 45.16 | 4.17 |
2968 | 4836 | 5.462068 | TCAAACTCGGATGAATGTAATAGCG | 59.538 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2974 | 6657 | 3.493129 | GGATGAATGTAATAGCGAACGCA | 59.507 | 43.478 | 20.66 | 7.73 | 44.88 | 5.24 |
2978 | 6661 | 4.390603 | TGAATGTAATAGCGAACGCAAAGT | 59.609 | 37.500 | 20.66 | 10.21 | 44.88 | 2.66 |
2982 | 6665 | 5.162794 | TGTAATAGCGAACGCAAAGTCTAA | 58.837 | 37.500 | 20.66 | 0.00 | 44.88 | 2.10 |
2993 | 6676 | 3.003480 | GCAAAGTCTAACCTGCCACTAG | 58.997 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3039 | 6722 | 6.089820 | GTGCCACATTTTAATTGTCACTGATG | 59.910 | 38.462 | 0.00 | 0.00 | 0.00 | 3.07 |
3048 | 6731 | 5.649782 | AATTGTCACTGATGAAATGTCCC | 57.350 | 39.130 | 0.00 | 0.00 | 36.31 | 4.46 |
3049 | 6732 | 3.071874 | TGTCACTGATGAAATGTCCCC | 57.928 | 47.619 | 0.00 | 0.00 | 36.31 | 4.81 |
3050 | 6733 | 2.290896 | TGTCACTGATGAAATGTCCCCC | 60.291 | 50.000 | 0.00 | 0.00 | 36.31 | 5.40 |
3051 | 6734 | 1.991813 | TCACTGATGAAATGTCCCCCA | 59.008 | 47.619 | 0.00 | 0.00 | 0.00 | 4.96 |
3052 | 6735 | 2.094675 | CACTGATGAAATGTCCCCCAC | 58.905 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
3053 | 6736 | 1.995542 | ACTGATGAAATGTCCCCCACT | 59.004 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
3054 | 6737 | 3.054434 | CACTGATGAAATGTCCCCCACTA | 60.054 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
3055 | 6738 | 3.591527 | ACTGATGAAATGTCCCCCACTAA | 59.408 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
3056 | 6739 | 4.230502 | ACTGATGAAATGTCCCCCACTAAT | 59.769 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
3057 | 6740 | 5.431731 | ACTGATGAAATGTCCCCCACTAATA | 59.568 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
3058 | 6741 | 6.103205 | ACTGATGAAATGTCCCCCACTAATAT | 59.897 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
3059 | 6742 | 6.921412 | TGATGAAATGTCCCCCACTAATATT | 58.079 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
3060 | 6743 | 7.361438 | TGATGAAATGTCCCCCACTAATATTT | 58.639 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
3061 | 6744 | 7.505585 | TGATGAAATGTCCCCCACTAATATTTC | 59.494 | 37.037 | 0.00 | 0.00 | 35.02 | 2.17 |
3062 | 6745 | 6.133356 | TGAAATGTCCCCCACTAATATTTCC | 58.867 | 40.000 | 0.00 | 0.00 | 34.08 | 3.13 |
3063 | 6746 | 3.849563 | TGTCCCCCACTAATATTTCCG | 57.150 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
3064 | 6747 | 3.116959 | TGTCCCCCACTAATATTTCCGT | 58.883 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
3065 | 6748 | 3.524380 | TGTCCCCCACTAATATTTCCGTT | 59.476 | 43.478 | 0.00 | 0.00 | 0.00 | 4.44 |
3066 | 6749 | 4.132336 | GTCCCCCACTAATATTTCCGTTC | 58.868 | 47.826 | 0.00 | 0.00 | 0.00 | 3.95 |
3067 | 6750 | 3.136992 | TCCCCCACTAATATTTCCGTTCC | 59.863 | 47.826 | 0.00 | 0.00 | 0.00 | 3.62 |
3068 | 6751 | 3.117813 | CCCCCACTAATATTTCCGTTCCA | 60.118 | 47.826 | 0.00 | 0.00 | 0.00 | 3.53 |
3069 | 6752 | 4.528920 | CCCCACTAATATTTCCGTTCCAA | 58.471 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
3070 | 6753 | 4.951094 | CCCCACTAATATTTCCGTTCCAAA | 59.049 | 41.667 | 0.00 | 0.00 | 0.00 | 3.28 |
3071 | 6754 | 5.596772 | CCCCACTAATATTTCCGTTCCAAAT | 59.403 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3072 | 6755 | 6.097696 | CCCCACTAATATTTCCGTTCCAAATT | 59.902 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
3073 | 6756 | 7.285858 | CCCCACTAATATTTCCGTTCCAAATTA | 59.714 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
3074 | 6757 | 8.132995 | CCCACTAATATTTCCGTTCCAAATTAC | 58.867 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
3075 | 6758 | 8.899771 | CCACTAATATTTCCGTTCCAAATTACT | 58.100 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
3076 | 6759 | 9.931210 | CACTAATATTTCCGTTCCAAATTACTC | 57.069 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
3077 | 6760 | 8.823818 | ACTAATATTTCCGTTCCAAATTACTCG | 58.176 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
3078 | 6761 | 7.619964 | AATATTTCCGTTCCAAATTACTCGT | 57.380 | 32.000 | 0.00 | 0.00 | 0.00 | 4.18 |
3079 | 6762 | 4.996062 | TTTCCGTTCCAAATTACTCGTC | 57.004 | 40.909 | 0.00 | 0.00 | 0.00 | 4.20 |
3080 | 6763 | 2.598589 | TCCGTTCCAAATTACTCGTCG | 58.401 | 47.619 | 0.00 | 0.00 | 0.00 | 5.12 |
3081 | 6764 | 2.030007 | TCCGTTCCAAATTACTCGTCGT | 60.030 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
3082 | 6765 | 2.091588 | CCGTTCCAAATTACTCGTCGTG | 59.908 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3083 | 6766 | 2.091588 | CGTTCCAAATTACTCGTCGTGG | 59.908 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
3084 | 6767 | 3.062042 | GTTCCAAATTACTCGTCGTGGT | 58.938 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
3085 | 6768 | 3.389925 | TCCAAATTACTCGTCGTGGTT | 57.610 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
3086 | 6769 | 3.731089 | TCCAAATTACTCGTCGTGGTTT | 58.269 | 40.909 | 0.00 | 0.00 | 0.00 | 3.27 |
3087 | 6770 | 4.128643 | TCCAAATTACTCGTCGTGGTTTT | 58.871 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
3088 | 6771 | 5.295950 | TCCAAATTACTCGTCGTGGTTTTA | 58.704 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
3089 | 6772 | 5.406175 | TCCAAATTACTCGTCGTGGTTTTAG | 59.594 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
3090 | 6773 | 5.178067 | CCAAATTACTCGTCGTGGTTTTAGT | 59.822 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3091 | 6774 | 6.293027 | CCAAATTACTCGTCGTGGTTTTAGTT | 60.293 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
3092 | 6775 | 6.457851 | AATTACTCGTCGTGGTTTTAGTTC | 57.542 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
3093 | 6776 | 3.441496 | ACTCGTCGTGGTTTTAGTTCA | 57.559 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
3094 | 6777 | 3.784338 | ACTCGTCGTGGTTTTAGTTCAA | 58.216 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
3095 | 6778 | 4.183101 | ACTCGTCGTGGTTTTAGTTCAAA | 58.817 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
3096 | 6779 | 4.812626 | ACTCGTCGTGGTTTTAGTTCAAAT | 59.187 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
3097 | 6780 | 5.295045 | ACTCGTCGTGGTTTTAGTTCAAATT | 59.705 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3098 | 6781 | 6.121613 | TCGTCGTGGTTTTAGTTCAAATTT | 57.878 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
3099 | 6782 | 5.966503 | TCGTCGTGGTTTTAGTTCAAATTTG | 59.033 | 36.000 | 12.15 | 12.15 | 0.00 | 2.32 |
3100 | 6783 | 5.966503 | CGTCGTGGTTTTAGTTCAAATTTGA | 59.033 | 36.000 | 16.91 | 16.91 | 34.92 | 2.69 |
3101 | 6784 | 6.469595 | CGTCGTGGTTTTAGTTCAAATTTGAA | 59.530 | 34.615 | 26.01 | 26.01 | 44.31 | 2.69 |
3114 | 6797 | 7.743520 | TTCAAATTTGAACTAAAACCACGAC | 57.256 | 32.000 | 26.01 | 0.00 | 41.88 | 4.34 |
3115 | 6798 | 5.966503 | TCAAATTTGAACTAAAACCACGACG | 59.033 | 36.000 | 18.45 | 0.00 | 33.55 | 5.12 |
3116 | 6799 | 5.738118 | AATTTGAACTAAAACCACGACGA | 57.262 | 34.783 | 0.00 | 0.00 | 0.00 | 4.20 |
3117 | 6800 | 4.782252 | TTTGAACTAAAACCACGACGAG | 57.218 | 40.909 | 0.00 | 0.00 | 0.00 | 4.18 |
3118 | 6801 | 3.441496 | TGAACTAAAACCACGACGAGT | 57.559 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
3119 | 6802 | 4.566545 | TGAACTAAAACCACGACGAGTA | 57.433 | 40.909 | 0.00 | 0.00 | 0.00 | 2.59 |
3120 | 6803 | 4.930963 | TGAACTAAAACCACGACGAGTAA | 58.069 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
3121 | 6804 | 5.531634 | TGAACTAAAACCACGACGAGTAAT | 58.468 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
3122 | 6805 | 5.984926 | TGAACTAAAACCACGACGAGTAATT | 59.015 | 36.000 | 0.00 | 1.08 | 0.00 | 1.40 |
3123 | 6806 | 6.479660 | TGAACTAAAACCACGACGAGTAATTT | 59.520 | 34.615 | 0.00 | 0.34 | 0.00 | 1.82 |
3124 | 6807 | 6.219302 | ACTAAAACCACGACGAGTAATTTG | 57.781 | 37.500 | 0.00 | 2.39 | 0.00 | 2.32 |
3125 | 6808 | 4.477302 | AAAACCACGACGAGTAATTTGG | 57.523 | 40.909 | 0.00 | 0.00 | 0.00 | 3.28 |
3126 | 6809 | 3.389925 | AACCACGACGAGTAATTTGGA | 57.610 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
3127 | 6810 | 3.389925 | ACCACGACGAGTAATTTGGAA | 57.610 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
3128 | 6811 | 3.062042 | ACCACGACGAGTAATTTGGAAC | 58.938 | 45.455 | 0.00 | 0.00 | 0.00 | 3.62 |
3129 | 6812 | 2.091588 | CCACGACGAGTAATTTGGAACG | 59.908 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
3130 | 6813 | 2.091588 | CACGACGAGTAATTTGGAACGG | 59.908 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
3131 | 6814 | 2.030007 | ACGACGAGTAATTTGGAACGGA | 60.030 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
3132 | 6815 | 2.597305 | CGACGAGTAATTTGGAACGGAG | 59.403 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3133 | 6816 | 3.671433 | CGACGAGTAATTTGGAACGGAGA | 60.671 | 47.826 | 0.00 | 0.00 | 0.00 | 3.71 |
3134 | 6817 | 3.846360 | ACGAGTAATTTGGAACGGAGAG | 58.154 | 45.455 | 0.00 | 0.00 | 0.00 | 3.20 |
3135 | 6818 | 3.508793 | ACGAGTAATTTGGAACGGAGAGA | 59.491 | 43.478 | 0.00 | 0.00 | 0.00 | 3.10 |
3136 | 6819 | 4.106197 | CGAGTAATTTGGAACGGAGAGAG | 58.894 | 47.826 | 0.00 | 0.00 | 0.00 | 3.20 |
3137 | 6820 | 4.380655 | CGAGTAATTTGGAACGGAGAGAGT | 60.381 | 45.833 | 0.00 | 0.00 | 0.00 | 3.24 |
3138 | 6821 | 5.163683 | CGAGTAATTTGGAACGGAGAGAGTA | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3139 | 6822 | 5.963594 | AGTAATTTGGAACGGAGAGAGTAC | 58.036 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
3140 | 6823 | 4.884668 | AATTTGGAACGGAGAGAGTACA | 57.115 | 40.909 | 0.00 | 0.00 | 0.00 | 2.90 |
3141 | 6824 | 5.422214 | AATTTGGAACGGAGAGAGTACAT | 57.578 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
3142 | 6825 | 6.540438 | AATTTGGAACGGAGAGAGTACATA | 57.460 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
3143 | 6826 | 5.578005 | TTTGGAACGGAGAGAGTACATAG | 57.422 | 43.478 | 0.00 | 0.00 | 0.00 | 2.23 |
3144 | 6827 | 2.950309 | TGGAACGGAGAGAGTACATAGC | 59.050 | 50.000 | 0.00 | 0.00 | 0.00 | 2.97 |
3145 | 6828 | 2.950309 | GGAACGGAGAGAGTACATAGCA | 59.050 | 50.000 | 0.00 | 0.00 | 0.00 | 3.49 |
3146 | 6829 | 3.003897 | GGAACGGAGAGAGTACATAGCAG | 59.996 | 52.174 | 0.00 | 0.00 | 0.00 | 4.24 |
3147 | 6830 | 3.284793 | ACGGAGAGAGTACATAGCAGT | 57.715 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
3148 | 6831 | 2.946329 | ACGGAGAGAGTACATAGCAGTG | 59.054 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
3149 | 6832 | 2.292016 | CGGAGAGAGTACATAGCAGTGG | 59.708 | 54.545 | 0.00 | 0.00 | 0.00 | 4.00 |
3150 | 6833 | 3.556999 | GGAGAGAGTACATAGCAGTGGA | 58.443 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3151 | 6834 | 3.568007 | GGAGAGAGTACATAGCAGTGGAG | 59.432 | 52.174 | 0.00 | 0.00 | 0.00 | 3.86 |
3152 | 6835 | 3.561143 | AGAGAGTACATAGCAGTGGAGG | 58.439 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3153 | 6836 | 3.203263 | AGAGAGTACATAGCAGTGGAGGA | 59.797 | 47.826 | 0.00 | 0.00 | 0.00 | 3.71 |
3154 | 6837 | 3.954904 | GAGAGTACATAGCAGTGGAGGAA | 59.045 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
3155 | 6838 | 4.353777 | AGAGTACATAGCAGTGGAGGAAA | 58.646 | 43.478 | 0.00 | 0.00 | 0.00 | 3.13 |
3156 | 6839 | 4.777896 | AGAGTACATAGCAGTGGAGGAAAA | 59.222 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
3157 | 6840 | 5.426833 | AGAGTACATAGCAGTGGAGGAAAAT | 59.573 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3158 | 6841 | 6.067217 | AGTACATAGCAGTGGAGGAAAATT | 57.933 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
3159 | 6842 | 7.125811 | AGAGTACATAGCAGTGGAGGAAAATTA | 59.874 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
3160 | 6843 | 7.048512 | AGTACATAGCAGTGGAGGAAAATTAC | 58.951 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
3161 | 6844 | 5.815581 | ACATAGCAGTGGAGGAAAATTACA | 58.184 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
3162 | 6845 | 5.882557 | ACATAGCAGTGGAGGAAAATTACAG | 59.117 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3163 | 6846 | 4.373156 | AGCAGTGGAGGAAAATTACAGT | 57.627 | 40.909 | 0.00 | 0.00 | 0.00 | 3.55 |
3164 | 6847 | 4.074970 | AGCAGTGGAGGAAAATTACAGTG | 58.925 | 43.478 | 0.00 | 0.00 | 36.00 | 3.66 |
3165 | 6848 | 3.191371 | GCAGTGGAGGAAAATTACAGTGG | 59.809 | 47.826 | 0.00 | 0.00 | 34.08 | 4.00 |
3166 | 6849 | 3.191371 | CAGTGGAGGAAAATTACAGTGGC | 59.809 | 47.826 | 0.00 | 0.00 | 0.00 | 5.01 |
3167 | 6850 | 2.492088 | GTGGAGGAAAATTACAGTGGCC | 59.508 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
3168 | 6851 | 1.743394 | GGAGGAAAATTACAGTGGCCG | 59.257 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
3169 | 6852 | 2.433436 | GAGGAAAATTACAGTGGCCGT | 58.567 | 47.619 | 0.00 | 0.00 | 0.00 | 5.68 |
3170 | 6853 | 2.817844 | GAGGAAAATTACAGTGGCCGTT | 59.182 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
3171 | 6854 | 2.556622 | AGGAAAATTACAGTGGCCGTTG | 59.443 | 45.455 | 0.00 | 0.67 | 0.00 | 4.10 |
3172 | 6855 | 2.324860 | GAAAATTACAGTGGCCGTTGC | 58.675 | 47.619 | 0.00 | 0.00 | 0.00 | 4.17 |
3173 | 6856 | 1.323412 | AAATTACAGTGGCCGTTGCA | 58.677 | 45.000 | 0.00 | 0.00 | 40.13 | 4.08 |
3174 | 6857 | 0.596082 | AATTACAGTGGCCGTTGCAC | 59.404 | 50.000 | 0.00 | 0.00 | 40.13 | 4.57 |
3175 | 6858 | 1.241315 | ATTACAGTGGCCGTTGCACC | 61.241 | 55.000 | 0.00 | 0.00 | 40.13 | 5.01 |
3176 | 6859 | 2.610532 | TTACAGTGGCCGTTGCACCA | 62.611 | 55.000 | 0.00 | 0.00 | 40.13 | 4.17 |
3185 | 6868 | 4.947147 | GTTGCACCACTCGGCCCA | 62.947 | 66.667 | 0.00 | 0.00 | 34.57 | 5.36 |
3186 | 6869 | 3.965258 | TTGCACCACTCGGCCCAT | 61.965 | 61.111 | 0.00 | 0.00 | 34.57 | 4.00 |
3187 | 6870 | 3.918253 | TTGCACCACTCGGCCCATC | 62.918 | 63.158 | 0.00 | 0.00 | 34.57 | 3.51 |
3188 | 6871 | 4.408821 | GCACCACTCGGCCCATCA | 62.409 | 66.667 | 0.00 | 0.00 | 34.57 | 3.07 |
3189 | 6872 | 2.436646 | CACCACTCGGCCCATCAC | 60.437 | 66.667 | 0.00 | 0.00 | 34.57 | 3.06 |
3190 | 6873 | 2.607750 | ACCACTCGGCCCATCACT | 60.608 | 61.111 | 0.00 | 0.00 | 34.57 | 3.41 |
3191 | 6874 | 2.124983 | CCACTCGGCCCATCACTG | 60.125 | 66.667 | 0.00 | 0.00 | 0.00 | 3.66 |
3192 | 6875 | 2.124983 | CACTCGGCCCATCACTGG | 60.125 | 66.667 | 0.00 | 0.00 | 42.73 | 4.00 |
3193 | 6876 | 2.607750 | ACTCGGCCCATCACTGGT | 60.608 | 61.111 | 0.00 | 0.00 | 41.37 | 4.00 |
3194 | 6877 | 1.305802 | ACTCGGCCCATCACTGGTA | 60.306 | 57.895 | 0.00 | 0.00 | 41.37 | 3.25 |
3195 | 6878 | 1.144057 | CTCGGCCCATCACTGGTAC | 59.856 | 63.158 | 0.00 | 0.00 | 41.37 | 3.34 |
3196 | 6879 | 1.305802 | TCGGCCCATCACTGGTACT | 60.306 | 57.895 | 0.00 | 0.00 | 41.37 | 2.73 |
3197 | 6880 | 0.907704 | TCGGCCCATCACTGGTACTT | 60.908 | 55.000 | 0.00 | 0.00 | 41.37 | 2.24 |
3198 | 6881 | 0.744414 | CGGCCCATCACTGGTACTTG | 60.744 | 60.000 | 0.00 | 0.00 | 41.37 | 3.16 |
3199 | 6882 | 0.618458 | GGCCCATCACTGGTACTTGA | 59.382 | 55.000 | 0.00 | 0.00 | 41.37 | 3.02 |
3239 | 6922 | 1.002868 | GTCATCTGGCACCAGCTGT | 60.003 | 57.895 | 17.58 | 0.00 | 43.31 | 4.40 |
3338 | 7021 | 3.132824 | TGAAGGCATCGTCATGTGACTAT | 59.867 | 43.478 | 11.03 | 3.28 | 42.66 | 2.12 |
3430 | 7113 | 1.595794 | GCGGTGTCGTTTCTCTTTTGA | 59.404 | 47.619 | 0.00 | 0.00 | 38.89 | 2.69 |
3576 | 7260 | 3.770040 | TCGGCAGGTGCTACGCAT | 61.770 | 61.111 | 1.26 | 0.00 | 41.91 | 4.73 |
3609 | 7294 | 1.598130 | GGCTTCAAGCTGTGTCGGT | 60.598 | 57.895 | 9.83 | 0.00 | 41.99 | 4.69 |
3676 | 7361 | 0.376852 | GACGTGTTCAGCTGTTTGCA | 59.623 | 50.000 | 14.67 | 5.93 | 45.94 | 4.08 |
3725 | 7410 | 0.101759 | GGTGGCGTTGACGATAGCTA | 59.898 | 55.000 | 7.85 | 0.00 | 43.02 | 3.32 |
3762 | 7447 | 5.550290 | TGATGCATCAGTACAGTTCTGAAA | 58.450 | 37.500 | 25.42 | 4.04 | 43.65 | 2.69 |
3831 | 7516 | 2.118732 | TGTGTGCCCTAGACCCGA | 59.881 | 61.111 | 0.00 | 0.00 | 0.00 | 5.14 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
240 | 241 | 9.908152 | AATATAACATCGATTGAGACATAACGA | 57.092 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
253 | 254 | 9.683069 | GCAAAATCAAAGGAATATAACATCGAT | 57.317 | 29.630 | 0.00 | 0.00 | 0.00 | 3.59 |
255 | 256 | 8.854979 | TGCAAAATCAAAGGAATATAACATCG | 57.145 | 30.769 | 0.00 | 0.00 | 0.00 | 3.84 |
260 | 261 | 9.199645 | TCTCCATGCAAAATCAAAGGAATATAA | 57.800 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
347 | 348 | 7.399245 | ACTGAGATTTAACCTAGTCTCACTC | 57.601 | 40.000 | 4.77 | 0.00 | 41.40 | 3.51 |
349 | 350 | 6.093771 | TCGACTGAGATTTAACCTAGTCTCAC | 59.906 | 42.308 | 4.77 | 0.00 | 41.40 | 3.51 |
357 | 358 | 6.640518 | TGCTAAATCGACTGAGATTTAACCT | 58.359 | 36.000 | 16.89 | 0.00 | 46.28 | 3.50 |
367 | 368 | 6.552859 | TTTTTCACATGCTAAATCGACTGA | 57.447 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
399 | 416 | 2.468915 | AGGGAGTGGCTAGGTAAACTC | 58.531 | 52.381 | 0.00 | 0.00 | 38.65 | 3.01 |
415 | 432 | 8.398878 | ACAACTCGTGAATATTTAAAAAGGGA | 57.601 | 30.769 | 0.00 | 0.00 | 0.00 | 4.20 |
495 | 513 | 9.445786 | TGAATTATCGAGTGTTTTGTTCTTTTC | 57.554 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
500 | 521 | 6.581166 | GGGTTGAATTATCGAGTGTTTTGTTC | 59.419 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
536 | 557 | 5.702209 | TCCTTTTTAAATCACGGTACTGTCC | 59.298 | 40.000 | 3.76 | 0.00 | 0.00 | 4.02 |
537 | 558 | 6.790285 | TCCTTTTTAAATCACGGTACTGTC | 57.210 | 37.500 | 3.76 | 0.00 | 0.00 | 3.51 |
538 | 559 | 7.499895 | TCTTTCCTTTTTAAATCACGGTACTGT | 59.500 | 33.333 | 0.04 | 0.04 | 0.00 | 3.55 |
539 | 560 | 7.867752 | TCTTTCCTTTTTAAATCACGGTACTG | 58.132 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
610 | 648 | 4.507388 | CACAAAATTTTGCACGGAGTTCAT | 59.493 | 37.500 | 26.94 | 3.96 | 38.88 | 2.57 |
614 | 652 | 3.490761 | CCTCACAAAATTTTGCACGGAGT | 60.491 | 43.478 | 26.94 | 6.49 | 41.79 | 3.85 |
623 | 661 | 4.227864 | TGGCCAAACCTCACAAAATTTT | 57.772 | 36.364 | 0.61 | 0.00 | 40.22 | 1.82 |
635 | 673 | 2.566952 | CATTCTCGAATGGCCAAACC | 57.433 | 50.000 | 10.96 | 0.05 | 43.25 | 3.27 |
670 | 708 | 2.653890 | CACAGTTCACGCCTGATTTTG | 58.346 | 47.619 | 0.00 | 0.00 | 34.04 | 2.44 |
679 | 718 | 1.753956 | AAAAATCGCACAGTTCACGC | 58.246 | 45.000 | 0.00 | 0.00 | 0.00 | 5.34 |
688 | 727 | 7.008810 | TGTCTGACAAACTTTTAAAAATCGCAC | 59.991 | 33.333 | 8.27 | 0.00 | 0.00 | 5.34 |
698 | 737 | 6.928979 | TTTCGGATGTCTGACAAACTTTTA | 57.071 | 33.333 | 15.31 | 0.00 | 0.00 | 1.52 |
727 | 766 | 0.465460 | AGGAGCTCGTGGCACAAAAA | 60.465 | 50.000 | 19.09 | 0.00 | 44.16 | 1.94 |
732 | 771 | 0.674895 | ATTCAAGGAGCTCGTGGCAC | 60.675 | 55.000 | 10.16 | 7.79 | 44.79 | 5.01 |
747 | 786 | 8.379161 | CGAAATTTTGTGAAGTTTGAACATTCA | 58.621 | 29.630 | 0.00 | 0.00 | 34.92 | 2.57 |
754 | 793 | 4.264145 | CGTGCGAAATTTTGTGAAGTTTGA | 59.736 | 37.500 | 7.27 | 0.00 | 0.00 | 2.69 |
778 | 817 | 0.928229 | AACTTCGTGTGCGTGAACTC | 59.072 | 50.000 | 0.00 | 0.00 | 39.49 | 3.01 |
781 | 820 | 2.495409 | TCTAACTTCGTGTGCGTGAA | 57.505 | 45.000 | 0.00 | 0.00 | 39.49 | 3.18 |
786 | 825 | 0.788391 | CCCGTTCTAACTTCGTGTGC | 59.212 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
791 | 830 | 1.400990 | CGCGACCCGTTCTAACTTCG | 61.401 | 60.000 | 0.00 | 0.00 | 0.00 | 3.79 |
804 | 1158 | 4.849329 | CGTAGGAGGCACGCGACC | 62.849 | 72.222 | 15.93 | 14.66 | 31.94 | 4.79 |
809 | 1163 | 0.524862 | AACTACACGTAGGAGGCACG | 59.475 | 55.000 | 8.97 | 0.00 | 44.80 | 5.34 |
850 | 1204 | 2.034532 | TCACGGCGGGACTGTCTA | 59.965 | 61.111 | 8.28 | 0.00 | 34.87 | 2.59 |
896 | 1250 | 1.336148 | CGTGTGCGTGTTTACCTAGGA | 60.336 | 52.381 | 17.98 | 0.00 | 0.00 | 2.94 |
966 | 1327 | 0.107017 | CTTCTCCATGGTTGCCCGAT | 60.107 | 55.000 | 12.58 | 0.00 | 0.00 | 4.18 |
991 | 1352 | 1.303317 | AAAACGCCATTCCGCCTCT | 60.303 | 52.632 | 0.00 | 0.00 | 0.00 | 3.69 |
1006 | 1367 | 3.552219 | GGGTTTTCCGCCCCAAAA | 58.448 | 55.556 | 0.00 | 0.00 | 40.88 | 2.44 |
1079 | 1444 | 3.371063 | GGTCGCTCGTGTCCAGGA | 61.371 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1326 | 1907 | 5.347342 | GCTGCAGCAGTACATATATAGGAG | 58.653 | 45.833 | 33.36 | 0.00 | 41.59 | 3.69 |
1327 | 1908 | 4.142381 | CGCTGCAGCAGTACATATATAGGA | 60.142 | 45.833 | 36.03 | 0.00 | 42.21 | 2.94 |
1328 | 1909 | 4.108336 | CGCTGCAGCAGTACATATATAGG | 58.892 | 47.826 | 36.03 | 12.42 | 42.21 | 2.57 |
1329 | 1910 | 3.549471 | GCGCTGCAGCAGTACATATATAG | 59.451 | 47.826 | 36.03 | 17.00 | 42.21 | 1.31 |
1557 | 2142 | 3.646715 | CCACCCCTTCTCCGGCAA | 61.647 | 66.667 | 0.00 | 0.00 | 0.00 | 4.52 |
1695 | 2280 | 4.142403 | TGGTGACCGTTTAAGGTAGATACG | 60.142 | 45.833 | 0.00 | 0.00 | 46.09 | 3.06 |
1697 | 2282 | 5.018809 | AGTGGTGACCGTTTAAGGTAGATA | 58.981 | 41.667 | 0.00 | 0.00 | 46.09 | 1.98 |
1711 | 2296 | 2.676463 | GCATCTCTCTGAAGTGGTGACC | 60.676 | 54.545 | 0.00 | 0.00 | 30.24 | 4.02 |
1714 | 2299 | 2.344950 | GTGCATCTCTCTGAAGTGGTG | 58.655 | 52.381 | 0.00 | 0.00 | 31.62 | 4.17 |
1715 | 2300 | 1.067283 | CGTGCATCTCTCTGAAGTGGT | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
1747 | 2332 | 9.556030 | GCAATCTGTTTGATCATCACATATATG | 57.444 | 33.333 | 11.29 | 11.29 | 37.53 | 1.78 |
1754 | 2339 | 5.353400 | TCTCTGCAATCTGTTTGATCATCAC | 59.647 | 40.000 | 0.00 | 0.00 | 37.53 | 3.06 |
1793 | 2393 | 3.108881 | CGTCACTGATTACCATGACTCG | 58.891 | 50.000 | 0.00 | 0.00 | 39.45 | 4.18 |
1819 | 2419 | 0.732571 | CAAAGACGCAATGGCCGTAT | 59.267 | 50.000 | 0.00 | 0.00 | 36.38 | 3.06 |
1840 | 2440 | 2.740826 | GGCACGAACGGCTTGCTA | 60.741 | 61.111 | 8.47 | 0.00 | 41.19 | 3.49 |
1914 | 2879 | 2.215451 | ATCAGGCACCATCCACCACC | 62.215 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
1915 | 2880 | 0.323725 | AATCAGGCACCATCCACCAC | 60.324 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
1916 | 2881 | 0.323633 | CAATCAGGCACCATCCACCA | 60.324 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
1932 | 2897 | 0.749454 | GATCCAGCCAAGTCGCCAAT | 60.749 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1998 | 2963 | 1.166531 | ACTTGAAAGCTGGGTCGTGC | 61.167 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1999 | 2964 | 0.588252 | CACTTGAAAGCTGGGTCGTG | 59.412 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2000 | 2965 | 0.535102 | CCACTTGAAAGCTGGGTCGT | 60.535 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
2003 | 2968 | 1.898574 | CGCCACTTGAAAGCTGGGT | 60.899 | 57.895 | 11.26 | 0.00 | 31.84 | 4.51 |
2004 | 2969 | 1.172180 | TTCGCCACTTGAAAGCTGGG | 61.172 | 55.000 | 11.26 | 3.79 | 31.84 | 4.45 |
2008 | 3324 | 2.704725 | TCAATTCGCCACTTGAAAGC | 57.295 | 45.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2044 | 3360 | 9.918630 | CAAATTAGGTTTTCTTTCAGATGTCAT | 57.081 | 29.630 | 0.00 | 0.00 | 0.00 | 3.06 |
2045 | 3361 | 8.912988 | ACAAATTAGGTTTTCTTTCAGATGTCA | 58.087 | 29.630 | 0.00 | 0.00 | 0.00 | 3.58 |
2046 | 3362 | 9.750125 | AACAAATTAGGTTTTCTTTCAGATGTC | 57.250 | 29.630 | 0.00 | 0.00 | 0.00 | 3.06 |
2047 | 3363 | 9.750125 | GAACAAATTAGGTTTTCTTTCAGATGT | 57.250 | 29.630 | 0.00 | 0.00 | 0.00 | 3.06 |
2059 | 3375 | 6.206048 | CCTGTTACCGAGAACAAATTAGGTTT | 59.794 | 38.462 | 4.07 | 0.00 | 38.80 | 3.27 |
2070 | 3386 | 5.476614 | ACTGAATAACCTGTTACCGAGAAC | 58.523 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
2074 | 3390 | 3.758023 | TCGACTGAATAACCTGTTACCGA | 59.242 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
2104 | 3424 | 2.426024 | GTCTACCGAGATGCCACAGTAA | 59.574 | 50.000 | 0.00 | 0.00 | 33.14 | 2.24 |
2191 | 3521 | 2.492449 | TTTCCACGGCGCTGAGAGAG | 62.492 | 60.000 | 25.98 | 6.31 | 0.00 | 3.20 |
2210 | 3540 | 9.203163 | GTATAGCTCCCTGGTCAAGTTATATAT | 57.797 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
2211 | 3541 | 7.618512 | GGTATAGCTCCCTGGTCAAGTTATATA | 59.381 | 40.741 | 0.00 | 0.00 | 0.00 | 0.86 |
2212 | 3542 | 6.440965 | GGTATAGCTCCCTGGTCAAGTTATAT | 59.559 | 42.308 | 0.00 | 0.00 | 0.00 | 0.86 |
2213 | 3543 | 5.778750 | GGTATAGCTCCCTGGTCAAGTTATA | 59.221 | 44.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2265 | 3595 | 2.672961 | TCATGGCGTTCTCGAAGAAT | 57.327 | 45.000 | 0.00 | 0.00 | 36.50 | 2.40 |
2399 | 3729 | 0.864455 | GTCGATGCCATCTAAGCAGC | 59.136 | 55.000 | 2.75 | 0.00 | 44.90 | 5.25 |
2536 | 3866 | 4.399303 | ACAATACCAAAACCAGATAGCAGC | 59.601 | 41.667 | 0.00 | 0.00 | 0.00 | 5.25 |
2539 | 3869 | 7.625828 | AGTTACAATACCAAAACCAGATAGC | 57.374 | 36.000 | 0.00 | 0.00 | 0.00 | 2.97 |
2589 | 3920 | 6.714810 | TGATTATTACAACATAGTCATGGGCC | 59.285 | 38.462 | 0.00 | 0.00 | 36.39 | 5.80 |
2603 | 3934 | 9.983024 | TCCTCCCAGTTAATTTGATTATTACAA | 57.017 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
2607 | 3938 | 8.893563 | TGTTCCTCCCAGTTAATTTGATTATT | 57.106 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
2608 | 3939 | 8.893563 | TTGTTCCTCCCAGTTAATTTGATTAT | 57.106 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
2654 | 4343 | 7.432252 | CCCGTGAATTGTAGCAAGAATATTTTC | 59.568 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
2704 | 4401 | 7.857885 | GCAGAATACTACCGTTAATTAGTACGT | 59.142 | 37.037 | 8.46 | 0.00 | 34.40 | 3.57 |
2705 | 4402 | 7.857389 | TGCAGAATACTACCGTTAATTAGTACG | 59.143 | 37.037 | 3.23 | 3.23 | 34.40 | 3.67 |
2706 | 4403 | 9.520204 | TTGCAGAATACTACCGTTAATTAGTAC | 57.480 | 33.333 | 0.00 | 0.00 | 34.40 | 2.73 |
2774 | 4471 | 1.697284 | GGAGCCAATCCTTCATTCCC | 58.303 | 55.000 | 0.00 | 0.00 | 45.64 | 3.97 |
2807 | 4504 | 0.525668 | CGAGAAGGGGTCGATCAACG | 60.526 | 60.000 | 0.00 | 0.00 | 39.92 | 4.10 |
2834 | 4531 | 2.704190 | AAGACTTGACCCTCTCCAGA | 57.296 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2861 | 4558 | 0.458669 | CCTTAGCTTTGCCATGCCTG | 59.541 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2873 | 4570 | 7.235606 | TGCATATATTACTTCACCTCCTTAGCT | 59.764 | 37.037 | 0.00 | 0.00 | 0.00 | 3.32 |
2900 | 4597 | 2.014068 | GCACATGCTCACCCCTAACTC | 61.014 | 57.143 | 0.00 | 0.00 | 38.21 | 3.01 |
2901 | 4598 | 0.035056 | GCACATGCTCACCCCTAACT | 60.035 | 55.000 | 0.00 | 0.00 | 38.21 | 2.24 |
2902 | 4599 | 0.322456 | TGCACATGCTCACCCCTAAC | 60.322 | 55.000 | 5.31 | 0.00 | 42.66 | 2.34 |
2903 | 4600 | 0.403655 | TTGCACATGCTCACCCCTAA | 59.596 | 50.000 | 5.31 | 0.00 | 42.66 | 2.69 |
2905 | 4602 | 1.604593 | GTTGCACATGCTCACCCCT | 60.605 | 57.895 | 5.31 | 0.00 | 42.66 | 4.79 |
2906 | 4603 | 1.181098 | AAGTTGCACATGCTCACCCC | 61.181 | 55.000 | 5.31 | 0.00 | 42.66 | 4.95 |
2926 | 4644 | 7.413328 | CGAGTTTGATTTCTCTCATATGCAACA | 60.413 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
2927 | 4645 | 6.904011 | CGAGTTTGATTTCTCTCATATGCAAC | 59.096 | 38.462 | 0.00 | 0.00 | 0.00 | 4.17 |
2928 | 4646 | 6.037500 | CCGAGTTTGATTTCTCTCATATGCAA | 59.962 | 38.462 | 0.00 | 0.00 | 0.00 | 4.08 |
2929 | 4647 | 5.525012 | CCGAGTTTGATTTCTCTCATATGCA | 59.475 | 40.000 | 0.00 | 0.00 | 0.00 | 3.96 |
2930 | 4648 | 5.755375 | TCCGAGTTTGATTTCTCTCATATGC | 59.245 | 40.000 | 0.00 | 0.00 | 0.00 | 3.14 |
2931 | 4649 | 7.654923 | TCATCCGAGTTTGATTTCTCTCATATG | 59.345 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
2932 | 4650 | 7.730084 | TCATCCGAGTTTGATTTCTCTCATAT | 58.270 | 34.615 | 0.00 | 0.00 | 0.00 | 1.78 |
2933 | 4651 | 7.112452 | TCATCCGAGTTTGATTTCTCTCATA | 57.888 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
2968 | 4836 | 1.197036 | GGCAGGTTAGACTTTGCGTTC | 59.803 | 52.381 | 0.00 | 0.00 | 37.43 | 3.95 |
2974 | 6657 | 6.622427 | AATACTAGTGGCAGGTTAGACTTT | 57.378 | 37.500 | 5.39 | 0.00 | 0.00 | 2.66 |
2978 | 6661 | 7.670605 | ATGTAAATACTAGTGGCAGGTTAGA | 57.329 | 36.000 | 5.39 | 0.00 | 0.00 | 2.10 |
2982 | 6665 | 5.664006 | TGGTATGTAAATACTAGTGGCAGGT | 59.336 | 40.000 | 5.39 | 0.00 | 0.00 | 4.00 |
2993 | 6676 | 4.574828 | CACCTGCCACTGGTATGTAAATAC | 59.425 | 45.833 | 0.00 | 0.00 | 33.97 | 1.89 |
3039 | 6722 | 5.240844 | CGGAAATATTAGTGGGGGACATTTC | 59.759 | 44.000 | 0.00 | 0.00 | 32.66 | 2.17 |
3044 | 6727 | 3.851458 | ACGGAAATATTAGTGGGGGAC | 57.149 | 47.619 | 0.00 | 0.00 | 0.00 | 4.46 |
3048 | 6731 | 6.709018 | ATTTGGAACGGAAATATTAGTGGG | 57.291 | 37.500 | 0.00 | 0.00 | 0.00 | 4.61 |
3049 | 6732 | 8.899771 | AGTAATTTGGAACGGAAATATTAGTGG | 58.100 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
3050 | 6733 | 9.931210 | GAGTAATTTGGAACGGAAATATTAGTG | 57.069 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
3051 | 6734 | 8.823818 | CGAGTAATTTGGAACGGAAATATTAGT | 58.176 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
3052 | 6735 | 8.823818 | ACGAGTAATTTGGAACGGAAATATTAG | 58.176 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
3053 | 6736 | 8.721019 | ACGAGTAATTTGGAACGGAAATATTA | 57.279 | 30.769 | 0.00 | 0.00 | 0.00 | 0.98 |
3054 | 6737 | 7.464977 | CGACGAGTAATTTGGAACGGAAATATT | 60.465 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
3055 | 6738 | 6.019318 | CGACGAGTAATTTGGAACGGAAATAT | 60.019 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
3056 | 6739 | 5.289193 | CGACGAGTAATTTGGAACGGAAATA | 59.711 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3057 | 6740 | 4.092383 | CGACGAGTAATTTGGAACGGAAAT | 59.908 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
3058 | 6741 | 3.429543 | CGACGAGTAATTTGGAACGGAAA | 59.570 | 43.478 | 0.00 | 0.00 | 0.00 | 3.13 |
3059 | 6742 | 2.988493 | CGACGAGTAATTTGGAACGGAA | 59.012 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
3060 | 6743 | 2.030007 | ACGACGAGTAATTTGGAACGGA | 60.030 | 45.455 | 0.00 | 0.00 | 0.00 | 4.69 |
3061 | 6744 | 2.091588 | CACGACGAGTAATTTGGAACGG | 59.908 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
3062 | 6745 | 2.091588 | CCACGACGAGTAATTTGGAACG | 59.908 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
3063 | 6746 | 3.062042 | ACCACGACGAGTAATTTGGAAC | 58.938 | 45.455 | 0.00 | 0.00 | 0.00 | 3.62 |
3064 | 6747 | 3.389925 | ACCACGACGAGTAATTTGGAA | 57.610 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
3065 | 6748 | 3.389925 | AACCACGACGAGTAATTTGGA | 57.610 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
3066 | 6749 | 4.477302 | AAAACCACGACGAGTAATTTGG | 57.523 | 40.909 | 0.00 | 0.00 | 0.00 | 3.28 |
3067 | 6750 | 6.219302 | ACTAAAACCACGACGAGTAATTTG | 57.781 | 37.500 | 0.00 | 2.39 | 0.00 | 2.32 |
3068 | 6751 | 6.479660 | TGAACTAAAACCACGACGAGTAATTT | 59.520 | 34.615 | 0.00 | 0.34 | 0.00 | 1.82 |
3069 | 6752 | 5.984926 | TGAACTAAAACCACGACGAGTAATT | 59.015 | 36.000 | 0.00 | 1.08 | 0.00 | 1.40 |
3070 | 6753 | 5.531634 | TGAACTAAAACCACGACGAGTAAT | 58.468 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
3071 | 6754 | 4.930963 | TGAACTAAAACCACGACGAGTAA | 58.069 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
3072 | 6755 | 4.566545 | TGAACTAAAACCACGACGAGTA | 57.433 | 40.909 | 0.00 | 0.00 | 0.00 | 2.59 |
3073 | 6756 | 3.441496 | TGAACTAAAACCACGACGAGT | 57.559 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
3074 | 6757 | 4.782252 | TTTGAACTAAAACCACGACGAG | 57.218 | 40.909 | 0.00 | 0.00 | 0.00 | 4.18 |
3075 | 6758 | 5.738118 | AATTTGAACTAAAACCACGACGA | 57.262 | 34.783 | 0.00 | 0.00 | 0.00 | 4.20 |
3076 | 6759 | 5.966503 | TCAAATTTGAACTAAAACCACGACG | 59.033 | 36.000 | 18.45 | 0.00 | 33.55 | 5.12 |
3077 | 6760 | 7.743520 | TTCAAATTTGAACTAAAACCACGAC | 57.256 | 32.000 | 26.01 | 0.00 | 41.88 | 4.34 |
3090 | 6773 | 6.469595 | CGTCGTGGTTTTAGTTCAAATTTGAA | 59.530 | 34.615 | 26.01 | 26.01 | 44.31 | 2.69 |
3091 | 6774 | 5.966503 | CGTCGTGGTTTTAGTTCAAATTTGA | 59.033 | 36.000 | 16.91 | 16.91 | 34.92 | 2.69 |
3092 | 6775 | 5.966503 | TCGTCGTGGTTTTAGTTCAAATTTG | 59.033 | 36.000 | 12.15 | 12.15 | 0.00 | 2.32 |
3093 | 6776 | 6.121613 | TCGTCGTGGTTTTAGTTCAAATTT | 57.878 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
3094 | 6777 | 5.295045 | ACTCGTCGTGGTTTTAGTTCAAATT | 59.705 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3095 | 6778 | 4.812626 | ACTCGTCGTGGTTTTAGTTCAAAT | 59.187 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
3096 | 6779 | 4.183101 | ACTCGTCGTGGTTTTAGTTCAAA | 58.817 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
3097 | 6780 | 3.784338 | ACTCGTCGTGGTTTTAGTTCAA | 58.216 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
3098 | 6781 | 3.441496 | ACTCGTCGTGGTTTTAGTTCA | 57.559 | 42.857 | 0.00 | 0.00 | 0.00 | 3.18 |
3099 | 6782 | 6.457851 | AATTACTCGTCGTGGTTTTAGTTC | 57.542 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
3100 | 6783 | 6.293027 | CCAAATTACTCGTCGTGGTTTTAGTT | 60.293 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
3101 | 6784 | 5.178067 | CCAAATTACTCGTCGTGGTTTTAGT | 59.822 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3102 | 6785 | 5.406175 | TCCAAATTACTCGTCGTGGTTTTAG | 59.594 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
3103 | 6786 | 5.295950 | TCCAAATTACTCGTCGTGGTTTTA | 58.704 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
3104 | 6787 | 4.128643 | TCCAAATTACTCGTCGTGGTTTT | 58.871 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
3105 | 6788 | 3.731089 | TCCAAATTACTCGTCGTGGTTT | 58.269 | 40.909 | 0.00 | 0.00 | 0.00 | 3.27 |
3106 | 6789 | 3.389925 | TCCAAATTACTCGTCGTGGTT | 57.610 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
3107 | 6790 | 3.062042 | GTTCCAAATTACTCGTCGTGGT | 58.938 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
3108 | 6791 | 2.091588 | CGTTCCAAATTACTCGTCGTGG | 59.908 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
3109 | 6792 | 2.091588 | CCGTTCCAAATTACTCGTCGTG | 59.908 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3110 | 6793 | 2.030007 | TCCGTTCCAAATTACTCGTCGT | 60.030 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
3111 | 6794 | 2.597305 | CTCCGTTCCAAATTACTCGTCG | 59.403 | 50.000 | 0.00 | 0.00 | 0.00 | 5.12 |
3112 | 6795 | 3.841643 | TCTCCGTTCCAAATTACTCGTC | 58.158 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
3113 | 6796 | 3.508793 | TCTCTCCGTTCCAAATTACTCGT | 59.491 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
3114 | 6797 | 4.106029 | TCTCTCCGTTCCAAATTACTCG | 57.894 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
3115 | 6798 | 5.074584 | ACTCTCTCCGTTCCAAATTACTC | 57.925 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
3116 | 6799 | 5.479375 | TGTACTCTCTCCGTTCCAAATTACT | 59.521 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3117 | 6800 | 5.717119 | TGTACTCTCTCCGTTCCAAATTAC | 58.283 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
3118 | 6801 | 5.988310 | TGTACTCTCTCCGTTCCAAATTA | 57.012 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
3119 | 6802 | 4.884668 | TGTACTCTCTCCGTTCCAAATT | 57.115 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
3120 | 6803 | 5.452077 | GCTATGTACTCTCTCCGTTCCAAAT | 60.452 | 44.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3121 | 6804 | 4.142227 | GCTATGTACTCTCTCCGTTCCAAA | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 3.28 |
3122 | 6805 | 3.380637 | GCTATGTACTCTCTCCGTTCCAA | 59.619 | 47.826 | 0.00 | 0.00 | 0.00 | 3.53 |
3123 | 6806 | 2.950309 | GCTATGTACTCTCTCCGTTCCA | 59.050 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3124 | 6807 | 2.950309 | TGCTATGTACTCTCTCCGTTCC | 59.050 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
3125 | 6808 | 3.628487 | ACTGCTATGTACTCTCTCCGTTC | 59.372 | 47.826 | 0.00 | 0.00 | 0.00 | 3.95 |
3126 | 6809 | 3.378742 | CACTGCTATGTACTCTCTCCGTT | 59.621 | 47.826 | 0.00 | 0.00 | 0.00 | 4.44 |
3127 | 6810 | 2.946329 | CACTGCTATGTACTCTCTCCGT | 59.054 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
3128 | 6811 | 2.292016 | CCACTGCTATGTACTCTCTCCG | 59.708 | 54.545 | 0.00 | 0.00 | 0.00 | 4.63 |
3129 | 6812 | 3.556999 | TCCACTGCTATGTACTCTCTCC | 58.443 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
3130 | 6813 | 3.568007 | CCTCCACTGCTATGTACTCTCTC | 59.432 | 52.174 | 0.00 | 0.00 | 0.00 | 3.20 |
3131 | 6814 | 3.203263 | TCCTCCACTGCTATGTACTCTCT | 59.797 | 47.826 | 0.00 | 0.00 | 0.00 | 3.10 |
3132 | 6815 | 3.556999 | TCCTCCACTGCTATGTACTCTC | 58.443 | 50.000 | 0.00 | 0.00 | 0.00 | 3.20 |
3133 | 6816 | 3.671740 | TCCTCCACTGCTATGTACTCT | 57.328 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
3134 | 6817 | 4.737855 | TTTCCTCCACTGCTATGTACTC | 57.262 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
3135 | 6818 | 5.700402 | ATTTTCCTCCACTGCTATGTACT | 57.300 | 39.130 | 0.00 | 0.00 | 0.00 | 2.73 |
3136 | 6819 | 6.821665 | TGTAATTTTCCTCCACTGCTATGTAC | 59.178 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
3137 | 6820 | 6.953101 | TGTAATTTTCCTCCACTGCTATGTA | 58.047 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3138 | 6821 | 5.815581 | TGTAATTTTCCTCCACTGCTATGT | 58.184 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
3139 | 6822 | 5.882557 | ACTGTAATTTTCCTCCACTGCTATG | 59.117 | 40.000 | 0.00 | 0.00 | 0.00 | 2.23 |
3140 | 6823 | 5.882557 | CACTGTAATTTTCCTCCACTGCTAT | 59.117 | 40.000 | 0.00 | 0.00 | 0.00 | 2.97 |
3141 | 6824 | 5.245531 | CACTGTAATTTTCCTCCACTGCTA | 58.754 | 41.667 | 0.00 | 0.00 | 0.00 | 3.49 |
3142 | 6825 | 4.074970 | CACTGTAATTTTCCTCCACTGCT | 58.925 | 43.478 | 0.00 | 0.00 | 0.00 | 4.24 |
3143 | 6826 | 3.191371 | CCACTGTAATTTTCCTCCACTGC | 59.809 | 47.826 | 0.00 | 0.00 | 0.00 | 4.40 |
3144 | 6827 | 3.191371 | GCCACTGTAATTTTCCTCCACTG | 59.809 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
3145 | 6828 | 3.421844 | GCCACTGTAATTTTCCTCCACT | 58.578 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
3146 | 6829 | 2.492088 | GGCCACTGTAATTTTCCTCCAC | 59.508 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3147 | 6830 | 2.802719 | GGCCACTGTAATTTTCCTCCA | 58.197 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
3148 | 6831 | 1.743394 | CGGCCACTGTAATTTTCCTCC | 59.257 | 52.381 | 2.24 | 0.00 | 0.00 | 4.30 |
3149 | 6832 | 2.433436 | ACGGCCACTGTAATTTTCCTC | 58.567 | 47.619 | 2.24 | 0.00 | 0.00 | 3.71 |
3150 | 6833 | 2.556622 | CAACGGCCACTGTAATTTTCCT | 59.443 | 45.455 | 2.24 | 0.00 | 0.00 | 3.36 |
3151 | 6834 | 2.924880 | GCAACGGCCACTGTAATTTTCC | 60.925 | 50.000 | 2.24 | 0.00 | 0.00 | 3.13 |
3152 | 6835 | 2.287909 | TGCAACGGCCACTGTAATTTTC | 60.288 | 45.455 | 2.24 | 0.00 | 40.13 | 2.29 |
3153 | 6836 | 1.683917 | TGCAACGGCCACTGTAATTTT | 59.316 | 42.857 | 2.24 | 0.00 | 40.13 | 1.82 |
3154 | 6837 | 1.000717 | GTGCAACGGCCACTGTAATTT | 60.001 | 47.619 | 2.24 | 0.00 | 40.13 | 1.82 |
3155 | 6838 | 0.596082 | GTGCAACGGCCACTGTAATT | 59.404 | 50.000 | 2.24 | 0.00 | 40.13 | 1.40 |
3156 | 6839 | 1.241315 | GGTGCAACGGCCACTGTAAT | 61.241 | 55.000 | 2.24 | 0.00 | 40.13 | 1.89 |
3157 | 6840 | 1.894756 | GGTGCAACGGCCACTGTAA | 60.895 | 57.895 | 2.24 | 0.00 | 40.13 | 2.41 |
3158 | 6841 | 2.281208 | GGTGCAACGGCCACTGTA | 60.281 | 61.111 | 2.24 | 0.00 | 40.13 | 2.74 |
3159 | 6842 | 4.497984 | TGGTGCAACGGCCACTGT | 62.498 | 61.111 | 2.24 | 0.00 | 40.13 | 3.55 |
3168 | 6851 | 4.947147 | TGGGCCGAGTGGTGCAAC | 62.947 | 66.667 | 0.00 | 0.00 | 37.67 | 4.17 |
3169 | 6852 | 3.918253 | GATGGGCCGAGTGGTGCAA | 62.918 | 63.158 | 0.00 | 0.00 | 37.67 | 4.08 |
3170 | 6853 | 4.408821 | GATGGGCCGAGTGGTGCA | 62.409 | 66.667 | 0.00 | 0.00 | 37.67 | 4.57 |
3171 | 6854 | 4.408821 | TGATGGGCCGAGTGGTGC | 62.409 | 66.667 | 0.00 | 0.00 | 37.67 | 5.01 |
3172 | 6855 | 2.436646 | GTGATGGGCCGAGTGGTG | 60.437 | 66.667 | 0.00 | 0.00 | 37.67 | 4.17 |
3173 | 6856 | 2.607750 | AGTGATGGGCCGAGTGGT | 60.608 | 61.111 | 0.00 | 0.00 | 37.67 | 4.16 |
3174 | 6857 | 2.124983 | CAGTGATGGGCCGAGTGG | 60.125 | 66.667 | 0.00 | 0.00 | 38.77 | 4.00 |
3175 | 6858 | 1.613317 | TACCAGTGATGGGCCGAGTG | 61.613 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3176 | 6859 | 1.305802 | TACCAGTGATGGGCCGAGT | 60.306 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
3177 | 6860 | 1.144057 | GTACCAGTGATGGGCCGAG | 59.856 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
3178 | 6861 | 0.907704 | AAGTACCAGTGATGGGCCGA | 60.908 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
3179 | 6862 | 0.744414 | CAAGTACCAGTGATGGGCCG | 60.744 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
3180 | 6863 | 0.618458 | TCAAGTACCAGTGATGGGCC | 59.382 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
3181 | 6864 | 1.407437 | CCTCAAGTACCAGTGATGGGC | 60.407 | 57.143 | 0.00 | 0.00 | 0.00 | 5.36 |
3182 | 6865 | 1.909302 | ACCTCAAGTACCAGTGATGGG | 59.091 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
3183 | 6866 | 2.303022 | ACACCTCAAGTACCAGTGATGG | 59.697 | 50.000 | 0.00 | 0.00 | 32.76 | 3.51 |
3184 | 6867 | 3.685139 | ACACCTCAAGTACCAGTGATG | 57.315 | 47.619 | 0.00 | 0.72 | 32.76 | 3.07 |
3185 | 6868 | 3.306088 | CGAACACCTCAAGTACCAGTGAT | 60.306 | 47.826 | 0.00 | 0.00 | 32.76 | 3.06 |
3186 | 6869 | 2.035449 | CGAACACCTCAAGTACCAGTGA | 59.965 | 50.000 | 0.00 | 0.00 | 32.76 | 3.41 |
3187 | 6870 | 2.404215 | CGAACACCTCAAGTACCAGTG | 58.596 | 52.381 | 0.00 | 0.00 | 34.61 | 3.66 |
3188 | 6871 | 1.343465 | CCGAACACCTCAAGTACCAGT | 59.657 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
3189 | 6872 | 1.616865 | TCCGAACACCTCAAGTACCAG | 59.383 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
3190 | 6873 | 1.707106 | TCCGAACACCTCAAGTACCA | 58.293 | 50.000 | 0.00 | 0.00 | 0.00 | 3.25 |
3191 | 6874 | 2.496470 | AGATCCGAACACCTCAAGTACC | 59.504 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
3192 | 6875 | 3.731264 | CGAGATCCGAACACCTCAAGTAC | 60.731 | 52.174 | 0.00 | 0.00 | 41.76 | 2.73 |
3193 | 6876 | 2.422479 | CGAGATCCGAACACCTCAAGTA | 59.578 | 50.000 | 0.00 | 0.00 | 41.76 | 2.24 |
3194 | 6877 | 1.202582 | CGAGATCCGAACACCTCAAGT | 59.797 | 52.381 | 0.00 | 0.00 | 41.76 | 3.16 |
3195 | 6878 | 1.469940 | CCGAGATCCGAACACCTCAAG | 60.470 | 57.143 | 5.32 | 0.00 | 41.76 | 3.02 |
3196 | 6879 | 0.530744 | CCGAGATCCGAACACCTCAA | 59.469 | 55.000 | 5.32 | 0.00 | 41.76 | 3.02 |
3197 | 6880 | 1.320344 | CCCGAGATCCGAACACCTCA | 61.320 | 60.000 | 5.32 | 0.00 | 41.76 | 3.86 |
3198 | 6881 | 1.035932 | TCCCGAGATCCGAACACCTC | 61.036 | 60.000 | 5.32 | 0.00 | 41.76 | 3.85 |
3199 | 6882 | 0.397254 | ATCCCGAGATCCGAACACCT | 60.397 | 55.000 | 5.32 | 0.00 | 41.76 | 4.00 |
3239 | 6922 | 0.037303 | AACTACGTCTCCCCGACTCA | 59.963 | 55.000 | 0.00 | 0.00 | 40.59 | 3.41 |
3430 | 7113 | 1.160137 | GCTCCACAAAACGATGCTCT | 58.840 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
3576 | 7260 | 1.556911 | GAAGCCCTTGGAGATCTGTCA | 59.443 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
3609 | 7294 | 0.112218 | ATGCTGCCAAGTACCACCAA | 59.888 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3676 | 7361 | 2.930562 | GGCACCTCCTCCCTGTGT | 60.931 | 66.667 | 0.00 | 0.00 | 32.62 | 3.72 |
3714 | 7399 | 1.227639 | GCTCGGTCTAGCTATCGTCA | 58.772 | 55.000 | 0.00 | 0.00 | 39.50 | 4.35 |
3725 | 7410 | 0.674895 | GCATCAACCTTGCTCGGTCT | 60.675 | 55.000 | 0.00 | 0.00 | 35.89 | 3.85 |
3762 | 7447 | 1.973281 | CAACTGCCACCGCTCCATT | 60.973 | 57.895 | 0.00 | 0.00 | 35.36 | 3.16 |
3831 | 7516 | 1.065997 | ACCCCAACCTAGCCACTTGT | 61.066 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.