Multiple sequence alignment - TraesCS3B01G365200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G365200 chr3B 100.000 4274 0 0 1 4274 576656411 576660684 0.000000e+00 7893.0
1 TraesCS3B01G365200 chr3B 96.262 107 4 0 4168 4274 762623208 762623314 4.390000e-40 176.0
2 TraesCS3B01G365200 chr3D 93.531 3339 86 49 394 3683 439838024 439841281 0.000000e+00 4850.0
3 TraesCS3B01G365200 chr3D 83.521 443 52 13 3676 4103 439841118 439841554 1.110000e-105 394.0
4 TraesCS3B01G365200 chr3A 89.805 2364 115 53 101 2418 579551974 579554257 0.000000e+00 2915.0
5 TraesCS3B01G365200 chr3A 89.861 1223 62 22 2481 3678 579554282 579555467 0.000000e+00 1515.0
6 TraesCS3B01G365200 chr3A 82.158 241 30 12 3668 3898 579555293 579555530 1.210000e-45 195.0
7 TraesCS3B01G365200 chr3A 84.615 78 8 4 191 267 146193000 146192926 1.650000e-09 75.0
8 TraesCS3B01G365200 chr1A 87.568 555 65 4 1096 1648 500343382 500342830 1.300000e-179 640.0
9 TraesCS3B01G365200 chr1A 76.140 658 119 28 2018 2663 500342679 500342048 1.150000e-80 311.0
10 TraesCS3B01G365200 chr1A 94.326 141 7 1 2747 2886 500341973 500341833 9.310000e-52 215.0
11 TraesCS3B01G365200 chr1A 90.210 143 14 0 1773 1915 500342826 500342684 2.030000e-43 187.0
12 TraesCS3B01G365200 chr1A 96.190 105 3 1 4170 4274 66862447 66862344 2.040000e-38 171.0
13 TraesCS3B01G365200 chr1B 87.547 530 64 2 1126 1654 544726918 544726390 2.830000e-171 612.0
14 TraesCS3B01G365200 chr1B 75.606 660 115 29 2018 2663 544726245 544725618 6.990000e-73 285.0
15 TraesCS3B01G365200 chr1B 94.074 135 8 0 2752 2886 544725534 544725400 5.600000e-49 206.0
16 TraesCS3B01G365200 chr1B 88.966 145 15 1 1772 1915 544726394 544726250 1.220000e-40 178.0
17 TraesCS3B01G365200 chr1D 87.405 524 64 2 1126 1648 404970811 404970289 6.120000e-168 601.0
18 TraesCS3B01G365200 chr1D 76.444 658 111 32 2018 2663 404970138 404969513 2.480000e-82 316.0
19 TraesCS3B01G365200 chr1D 93.617 141 8 1 2747 2886 404969438 404969298 4.330000e-50 209.0
20 TraesCS3B01G365200 chr1D 90.909 143 13 0 1773 1915 404970285 404970143 4.360000e-45 193.0
21 TraesCS3B01G365200 chr1D 95.413 109 4 1 4166 4274 108802275 108802382 5.680000e-39 172.0
22 TraesCS3B01G365200 chr4A 86.957 529 69 0 1126 1654 466926025 466926553 2.850000e-166 595.0
23 TraesCS3B01G365200 chr4A 87.234 47 6 0 190 236 63528406 63528360 2.000000e-03 54.7
24 TraesCS3B01G365200 chr4B 86.604 530 69 2 1126 1654 171028540 171028012 6.160000e-163 584.0
25 TraesCS3B01G365200 chr4B 97.143 105 3 0 4170 4274 580015198 580015094 1.220000e-40 178.0
26 TraesCS3B01G365200 chr4B 85.417 144 21 0 1772 1915 171028015 171027872 2.660000e-32 150.0
27 TraesCS3B01G365200 chr4D 86.389 529 72 0 1126 1654 109911952 109911424 2.870000e-161 579.0
28 TraesCS3B01G365200 chr4D 84.722 144 22 0 1772 1915 109911427 109911284 1.240000e-30 145.0
29 TraesCS3B01G365200 chr5B 82.109 531 91 4 1126 1654 259538264 259538792 6.520000e-123 451.0
30 TraesCS3B01G365200 chrUn 96.364 110 3 1 4165 4274 111028705 111028813 3.400000e-41 180.0
31 TraesCS3B01G365200 chr2D 96.296 108 3 1 4167 4274 43966321 43966215 4.390000e-40 176.0
32 TraesCS3B01G365200 chr2D 93.220 118 5 3 4159 4274 2673694 2673578 2.040000e-38 171.0
33 TraesCS3B01G365200 chr7D 96.190 105 3 1 4170 4274 71352745 71352642 2.040000e-38 171.0
34 TraesCS3B01G365200 chr5D 91.667 120 8 2 4156 4274 449898100 449898218 9.510000e-37 165.0
35 TraesCS3B01G365200 chr6B 81.395 172 25 5 157 323 677150935 677150766 2.680000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G365200 chr3B 576656411 576660684 4273 False 7893.000000 7893 100.000000 1 4274 1 chr3B.!!$F1 4273
1 TraesCS3B01G365200 chr3D 439838024 439841554 3530 False 2622.000000 4850 88.526000 394 4103 2 chr3D.!!$F1 3709
2 TraesCS3B01G365200 chr3A 579551974 579555530 3556 False 1541.666667 2915 87.274667 101 3898 3 chr3A.!!$F1 3797
3 TraesCS3B01G365200 chr1A 500341833 500343382 1549 True 338.250000 640 87.061000 1096 2886 4 chr1A.!!$R2 1790
4 TraesCS3B01G365200 chr1B 544725400 544726918 1518 True 320.250000 612 86.548250 1126 2886 4 chr1B.!!$R1 1760
5 TraesCS3B01G365200 chr1D 404969298 404970811 1513 True 329.750000 601 87.093750 1126 2886 4 chr1D.!!$R1 1760
6 TraesCS3B01G365200 chr4A 466926025 466926553 528 False 595.000000 595 86.957000 1126 1654 1 chr4A.!!$F1 528
7 TraesCS3B01G365200 chr4B 171027872 171028540 668 True 367.000000 584 86.010500 1126 1915 2 chr4B.!!$R2 789
8 TraesCS3B01G365200 chr4D 109911284 109911952 668 True 362.000000 579 85.555500 1126 1915 2 chr4D.!!$R1 789
9 TraesCS3B01G365200 chr5B 259538264 259538792 528 False 451.000000 451 82.109000 1126 1654 1 chr5B.!!$F1 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
550 560 0.387367 GAGATCGTGTCAGCGTGTGT 60.387 55.0 0.00 0.00 0.00 3.72 F
823 854 0.397254 TTCCAAAACGGGGAAGGCAA 60.397 50.0 0.00 0.00 39.44 4.52 F
1767 1823 0.899717 ATTCTGGCGCCATTGTTGGT 60.900 50.0 32.87 9.18 45.57 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1767 1823 0.178992 CTTGAACACCTCCCCTGCAA 60.179 55.0 0.0 0.0 0.00 4.08 R
2479 2557 0.870393 GCGATGACCTGCATACCATG 59.130 55.0 0.0 0.0 37.34 3.66 R
3684 3826 0.035439 ATGCCCACCTTACTCAACCG 60.035 55.0 0.0 0.0 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.170584 GAGCTTTTTATGTTATTATTTCTCCGC 57.829 33.333 0.00 0.00 0.00 5.54
31 32 8.682710 AGCTTTTTATGTTATTATTTCTCCGCA 58.317 29.630 0.00 0.00 0.00 5.69
32 33 9.463443 GCTTTTTATGTTATTATTTCTCCGCAT 57.537 29.630 0.00 0.00 0.00 4.73
38 39 7.851387 TGTTATTATTTCTCCGCATGTTACA 57.149 32.000 0.00 0.00 0.00 2.41
39 40 8.445275 TGTTATTATTTCTCCGCATGTTACAT 57.555 30.769 0.00 0.00 0.00 2.29
40 41 8.341903 TGTTATTATTTCTCCGCATGTTACATG 58.658 33.333 19.89 19.89 0.00 3.21
41 42 8.556194 GTTATTATTTCTCCGCATGTTACATGA 58.444 33.333 27.17 7.23 0.00 3.07
42 43 7.750229 ATTATTTCTCCGCATGTTACATGAT 57.250 32.000 27.17 12.81 0.00 2.45
43 44 8.846943 ATTATTTCTCCGCATGTTACATGATA 57.153 30.769 27.17 11.90 0.00 2.15
44 45 8.669946 TTATTTCTCCGCATGTTACATGATAA 57.330 30.769 27.17 16.36 0.00 1.75
45 46 7.750229 ATTTCTCCGCATGTTACATGATAAT 57.250 32.000 27.17 13.02 0.00 1.28
46 47 7.566760 TTTCTCCGCATGTTACATGATAATT 57.433 32.000 27.17 0.00 0.00 1.40
47 48 6.544038 TCTCCGCATGTTACATGATAATTG 57.456 37.500 27.17 11.86 0.00 2.32
48 49 5.469760 TCTCCGCATGTTACATGATAATTGG 59.530 40.000 27.17 16.71 0.00 3.16
49 50 5.372373 TCCGCATGTTACATGATAATTGGA 58.628 37.500 27.17 18.36 0.00 3.53
50 51 6.003326 TCCGCATGTTACATGATAATTGGAT 58.997 36.000 27.17 0.00 0.00 3.41
51 52 6.489700 TCCGCATGTTACATGATAATTGGATT 59.510 34.615 27.17 0.00 0.00 3.01
52 53 6.583427 CCGCATGTTACATGATAATTGGATTG 59.417 38.462 27.17 0.00 0.00 2.67
53 54 6.583427 CGCATGTTACATGATAATTGGATTGG 59.417 38.462 27.17 0.00 0.00 3.16
54 55 6.869913 GCATGTTACATGATAATTGGATTGGG 59.130 38.462 27.17 0.00 0.00 4.12
55 56 7.471819 GCATGTTACATGATAATTGGATTGGGT 60.472 37.037 27.17 0.00 0.00 4.51
56 57 9.076781 CATGTTACATGATAATTGGATTGGGTA 57.923 33.333 19.55 0.00 0.00 3.69
57 58 8.690203 TGTTACATGATAATTGGATTGGGTAG 57.310 34.615 0.00 0.00 0.00 3.18
58 59 8.498575 TGTTACATGATAATTGGATTGGGTAGA 58.501 33.333 0.00 0.00 0.00 2.59
59 60 9.520515 GTTACATGATAATTGGATTGGGTAGAT 57.479 33.333 0.00 0.00 0.00 1.98
62 63 9.082313 ACATGATAATTGGATTGGGTAGATTTC 57.918 33.333 0.00 0.00 0.00 2.17
63 64 8.526147 CATGATAATTGGATTGGGTAGATTTCC 58.474 37.037 0.00 0.00 0.00 3.13
64 65 7.825709 TGATAATTGGATTGGGTAGATTTCCT 58.174 34.615 0.00 0.00 0.00 3.36
65 66 8.288812 TGATAATTGGATTGGGTAGATTTCCTT 58.711 33.333 0.00 0.00 0.00 3.36
66 67 9.147732 GATAATTGGATTGGGTAGATTTCCTTT 57.852 33.333 0.00 0.00 0.00 3.11
67 68 7.813087 AATTGGATTGGGTAGATTTCCTTTT 57.187 32.000 0.00 0.00 0.00 2.27
68 69 7.813087 ATTGGATTGGGTAGATTTCCTTTTT 57.187 32.000 0.00 0.00 0.00 1.94
99 100 4.853468 TTTTATAGTGTGGCCATCCTCA 57.147 40.909 9.72 0.00 33.79 3.86
112 113 5.372363 TGGCCATCCTCATTTTATTCCTAGA 59.628 40.000 0.00 0.00 0.00 2.43
116 117 7.833183 GCCATCCTCATTTTATTCCTAGATCAT 59.167 37.037 0.00 0.00 0.00 2.45
119 120 7.615403 TCCTCATTTTATTCCTAGATCATCCG 58.385 38.462 0.00 0.00 0.00 4.18
122 123 8.134202 TCATTTTATTCCTAGATCATCCGCTA 57.866 34.615 0.00 0.00 0.00 4.26
137 138 3.426615 TCCGCTATCCCAAACAAAACAT 58.573 40.909 0.00 0.00 0.00 2.71
139 140 4.638421 TCCGCTATCCCAAACAAAACATAG 59.362 41.667 0.00 0.00 0.00 2.23
149 150 7.067251 TCCCAAACAAAACATAGTACTTTTCGT 59.933 33.333 0.00 0.00 0.00 3.85
161 162 6.947644 AGTACTTTTCGTAAACCCAAATGT 57.052 33.333 0.00 0.00 0.00 2.71
168 169 9.172820 CTTTTCGTAAACCCAAATGTTAAGTAC 57.827 33.333 0.00 0.00 0.00 2.73
171 172 6.427547 TCGTAAACCCAAATGTTAAGTACCTG 59.572 38.462 0.00 0.00 0.00 4.00
172 173 6.427547 CGTAAACCCAAATGTTAAGTACCTGA 59.572 38.462 0.00 0.00 0.00 3.86
173 174 7.120138 CGTAAACCCAAATGTTAAGTACCTGAT 59.880 37.037 0.00 0.00 0.00 2.90
175 176 5.887754 ACCCAAATGTTAAGTACCTGATGT 58.112 37.500 0.00 0.00 0.00 3.06
179 180 6.878923 CCAAATGTTAAGTACCTGATGTCAGA 59.121 38.462 11.47 0.00 46.59 3.27
182 183 9.601217 AAATGTTAAGTACCTGATGTCAGATAC 57.399 33.333 11.47 8.86 46.59 2.24
187 188 2.379005 ACCTGATGTCAGATACGAGCA 58.621 47.619 11.47 0.00 46.59 4.26
200 201 1.246649 ACGAGCAACATGGCAAATCA 58.753 45.000 0.00 0.00 35.83 2.57
202 203 2.035704 ACGAGCAACATGGCAAATCAAA 59.964 40.909 0.00 0.00 35.83 2.69
203 204 3.255725 CGAGCAACATGGCAAATCAAAT 58.744 40.909 0.00 0.00 35.83 2.32
204 205 4.082300 ACGAGCAACATGGCAAATCAAATA 60.082 37.500 0.00 0.00 35.83 1.40
210 211 9.228949 AGCAACATGGCAAATCAAATATTTTTA 57.771 25.926 0.00 0.00 35.83 1.52
233 234 2.346803 GCAATTCTAGTGACGCAAGGA 58.653 47.619 0.00 0.00 46.39 3.36
244 245 3.496884 GTGACGCAAGGATGACAAGTTAA 59.503 43.478 0.00 0.00 46.39 2.01
267 268 9.729023 TTAATTGACACACACTGTAATTTTCTG 57.271 29.630 0.00 0.00 31.03 3.02
271 272 6.037062 TGACACACACTGTAATTTTCTGTCAG 59.963 38.462 0.00 0.00 31.03 3.51
288 289 6.959361 TCTGTCAGAAAATAAACTCAAGCAC 58.041 36.000 0.00 0.00 0.00 4.40
295 296 8.067784 CAGAAAATAAACTCAAGCACGAAGTTA 58.932 33.333 0.00 0.00 41.61 2.24
340 341 3.679980 CCATCCTGACGTCACTAAACTTG 59.320 47.826 15.76 1.86 0.00 3.16
350 351 4.804139 CGTCACTAAACTTGCTATCGGAAT 59.196 41.667 0.00 0.00 0.00 3.01
364 365 1.129624 TCGGAATCGTTTGATTTGCCG 59.870 47.619 10.27 10.27 45.95 5.69
396 405 2.169769 TCGGGCGTTATCAGATTCCTTT 59.830 45.455 0.00 0.00 0.00 3.11
399 408 4.448210 GGGCGTTATCAGATTCCTTTGTA 58.552 43.478 0.00 0.00 0.00 2.41
443 452 3.366396 CATCCACTACCTCGGGCTATAT 58.634 50.000 0.00 0.00 0.00 0.86
475 484 2.598394 ATGCCAAGTGCGTTGCCT 60.598 55.556 0.00 0.00 45.60 4.75
500 510 4.551702 ACTTTTGGTTCACTTTGCCTTT 57.448 36.364 0.00 0.00 0.00 3.11
513 523 1.210204 TGCCTTTCTGCATCCTCCCT 61.210 55.000 0.00 0.00 36.04 4.20
550 560 0.387367 GAGATCGTGTCAGCGTGTGT 60.387 55.000 0.00 0.00 0.00 3.72
588 607 2.701163 GATCGGATCGGAGGTGCACC 62.701 65.000 29.22 29.22 0.00 5.01
607 626 0.800631 CGTGCACAACAGCTGATCAT 59.199 50.000 23.35 0.00 34.99 2.45
639 658 1.970917 GAGCGCACGAATCAGTTGGG 61.971 60.000 11.47 0.00 0.00 4.12
646 665 0.804989 CGAATCAGTTGGGCTTGGAC 59.195 55.000 0.00 0.00 0.00 4.02
647 666 0.804989 GAATCAGTTGGGCTTGGACG 59.195 55.000 0.00 0.00 0.00 4.79
648 667 1.244019 AATCAGTTGGGCTTGGACGC 61.244 55.000 0.00 0.00 0.00 5.19
649 668 2.410322 ATCAGTTGGGCTTGGACGCA 62.410 55.000 0.00 0.00 0.00 5.24
650 669 2.594592 AGTTGGGCTTGGACGCAC 60.595 61.111 0.00 0.00 31.48 5.34
651 670 4.025401 GTTGGGCTTGGACGCACG 62.025 66.667 0.00 0.00 35.64 5.34
657 676 3.767230 CTTGGACGCACGCACGAG 61.767 66.667 4.54 0.00 36.70 4.18
665 684 4.700365 CACGCACGAGCAGGACGA 62.700 66.667 5.50 0.00 42.27 4.20
666 685 4.406173 ACGCACGAGCAGGACGAG 62.406 66.667 5.50 0.00 42.27 4.18
668 687 4.803426 GCACGAGCAGGACGAGGG 62.803 72.222 0.00 0.00 41.58 4.30
669 688 3.374402 CACGAGCAGGACGAGGGT 61.374 66.667 0.00 0.00 34.70 4.34
670 689 3.374402 ACGAGCAGGACGAGGGTG 61.374 66.667 0.00 0.00 34.70 4.61
671 690 3.062466 CGAGCAGGACGAGGGTGA 61.062 66.667 0.00 0.00 0.00 4.02
672 691 2.574399 GAGCAGGACGAGGGTGAC 59.426 66.667 0.00 0.00 0.00 3.67
673 692 3.343788 GAGCAGGACGAGGGTGACG 62.344 68.421 0.00 0.00 0.00 4.35
674 693 3.371063 GCAGGACGAGGGTGACGA 61.371 66.667 0.00 0.00 34.70 4.20
675 694 2.878429 CAGGACGAGGGTGACGAG 59.122 66.667 0.00 0.00 34.70 4.18
676 695 1.674651 CAGGACGAGGGTGACGAGA 60.675 63.158 0.00 0.00 34.70 4.04
677 696 1.377463 AGGACGAGGGTGACGAGAG 60.377 63.158 0.00 0.00 34.70 3.20
696 715 2.835156 GAGTCTCCCAGTTTTCCTAGCT 59.165 50.000 0.00 0.00 0.00 3.32
772 803 3.197549 CCTCTCTCAAGGAAGGAAGGAAG 59.802 52.174 0.00 0.00 38.87 3.46
790 821 6.068461 AGGAAGGAAGAAAAAGATAGGACC 57.932 41.667 0.00 0.00 0.00 4.46
791 822 5.551977 AGGAAGGAAGAAAAAGATAGGACCA 59.448 40.000 0.00 0.00 0.00 4.02
792 823 6.045577 AGGAAGGAAGAAAAAGATAGGACCAA 59.954 38.462 0.00 0.00 0.00 3.67
793 824 6.375736 GGAAGGAAGAAAAAGATAGGACCAAG 59.624 42.308 0.00 0.00 0.00 3.61
794 825 5.821097 AGGAAGAAAAAGATAGGACCAAGG 58.179 41.667 0.00 0.00 0.00 3.61
795 826 4.399618 GGAAGAAAAAGATAGGACCAAGGC 59.600 45.833 0.00 0.00 0.00 4.35
796 827 4.657814 AGAAAAAGATAGGACCAAGGCA 57.342 40.909 0.00 0.00 0.00 4.75
797 828 5.198602 AGAAAAAGATAGGACCAAGGCAT 57.801 39.130 0.00 0.00 0.00 4.40
823 854 0.397254 TTCCAAAACGGGGAAGGCAA 60.397 50.000 0.00 0.00 39.44 4.52
825 856 1.665442 CAAAACGGGGAAGGCAAGG 59.335 57.895 0.00 0.00 0.00 3.61
827 858 1.112916 AAAACGGGGAAGGCAAGGTG 61.113 55.000 0.00 0.00 0.00 4.00
840 871 1.926510 GCAAGGTGCAACAAACAGAAC 59.073 47.619 3.64 0.00 44.26 3.01
841 872 2.673610 GCAAGGTGCAACAAACAGAACA 60.674 45.455 3.64 0.00 44.26 3.18
842 873 2.923020 CAAGGTGCAACAAACAGAACAC 59.077 45.455 3.64 0.00 39.98 3.32
919 951 1.410004 CGCTCCCTATACAACCTCCA 58.590 55.000 0.00 0.00 0.00 3.86
922 954 1.068741 CTCCCTATACAACCTCCACGC 59.931 57.143 0.00 0.00 0.00 5.34
1206 1240 3.626924 ACCGTCGGCAAGGAGCTT 61.627 61.111 12.28 0.00 44.79 3.74
1767 1823 0.899717 ATTCTGGCGCCATTGTTGGT 60.900 50.000 32.87 9.18 45.57 3.67
1924 1980 3.997064 CTTCTGGGCAGGCGAGTCG 62.997 68.421 8.54 8.54 0.00 4.18
1983 2047 6.464834 GTCTAAACGAAACGCATCAATTAAGG 59.535 38.462 0.00 0.00 0.00 2.69
1985 2049 5.866335 AACGAAACGCATCAATTAAGGTA 57.134 34.783 0.00 0.00 0.00 3.08
1986 2050 5.464965 ACGAAACGCATCAATTAAGGTAG 57.535 39.130 0.00 0.00 0.00 3.18
1987 2051 4.201783 ACGAAACGCATCAATTAAGGTAGC 60.202 41.667 0.00 0.00 0.00 3.58
1989 2053 3.173668 ACGCATCAATTAAGGTAGCGA 57.826 42.857 10.98 0.00 45.78 4.93
1990 2054 3.123804 ACGCATCAATTAAGGTAGCGAG 58.876 45.455 10.98 0.00 45.78 5.03
1991 2055 3.181479 ACGCATCAATTAAGGTAGCGAGA 60.181 43.478 10.98 0.00 45.78 4.04
1992 2056 3.182572 CGCATCAATTAAGGTAGCGAGAC 59.817 47.826 0.00 0.00 45.78 3.36
1993 2057 4.372656 GCATCAATTAAGGTAGCGAGACT 58.627 43.478 0.00 0.00 0.00 3.24
1994 2058 4.210120 GCATCAATTAAGGTAGCGAGACTG 59.790 45.833 0.00 0.00 0.00 3.51
1995 2059 4.386867 TCAATTAAGGTAGCGAGACTGG 57.613 45.455 0.00 0.00 0.00 4.00
1996 2060 3.132289 TCAATTAAGGTAGCGAGACTGGG 59.868 47.826 0.00 0.00 0.00 4.45
2002 2066 2.168728 AGGTAGCGAGACTGGGATTTTC 59.831 50.000 0.00 0.00 0.00 2.29
2198 2262 5.680665 GCCCATCTCTTTGCCTTTTTATGAG 60.681 44.000 0.00 0.00 0.00 2.90
2199 2263 5.420104 CCCATCTCTTTGCCTTTTTATGAGT 59.580 40.000 0.00 0.00 0.00 3.41
2201 2265 7.201767 CCCATCTCTTTGCCTTTTTATGAGTAG 60.202 40.741 0.00 0.00 0.00 2.57
2202 2266 7.337942 CCATCTCTTTGCCTTTTTATGAGTAGT 59.662 37.037 0.00 0.00 0.00 2.73
2253 2327 5.366460 ACTGAATTCTGATCCTATGCTGTG 58.634 41.667 18.13 0.00 0.00 3.66
2446 2524 1.537202 GTGCACAACTGAACCTCCATC 59.463 52.381 13.17 0.00 0.00 3.51
2451 2529 3.750130 CACAACTGAACCTCCATCTTCTG 59.250 47.826 0.00 0.00 0.00 3.02
2453 2531 4.103153 ACAACTGAACCTCCATCTTCTGAA 59.897 41.667 0.00 0.00 0.00 3.02
2455 2533 3.906846 ACTGAACCTCCATCTTCTGAAGT 59.093 43.478 16.43 2.45 0.00 3.01
2456 2534 4.252073 CTGAACCTCCATCTTCTGAAGTG 58.748 47.826 16.43 13.23 0.00 3.16
2476 2554 2.083774 GAACTGAACGGATCCATTGCA 58.916 47.619 13.41 1.39 0.00 4.08
2477 2555 2.425143 ACTGAACGGATCCATTGCAT 57.575 45.000 13.41 0.00 0.00 3.96
2478 2556 2.019249 ACTGAACGGATCCATTGCATG 58.981 47.619 13.41 0.00 0.00 4.06
2479 2557 0.740149 TGAACGGATCCATTGCATGC 59.260 50.000 11.82 11.82 0.00 4.06
2663 2741 1.737838 CAGCTCATGGAAGCCGTAAA 58.262 50.000 2.91 0.00 43.56 2.01
2707 2811 5.065988 ACATTTGGCCGCTTAATTACTACTG 59.934 40.000 0.00 0.00 0.00 2.74
3175 3288 0.461339 AAAGCTCGTCGTGGTTGTGT 60.461 50.000 11.96 0.00 0.00 3.72
3301 3414 3.056328 GTTGGTGGAGGAAGCCGC 61.056 66.667 0.00 0.00 37.72 6.53
3373 3492 2.774951 GCAACGACGACGACGATGG 61.775 63.158 25.15 14.26 42.66 3.51
3580 3718 0.872388 GTACACGGTTTCAGGCTTGG 59.128 55.000 0.00 0.00 0.00 3.61
3587 3725 2.817258 CGGTTTCAGGCTTGGAAATGTA 59.183 45.455 3.66 0.00 36.71 2.29
3609 3747 7.149973 TGTACAGGTATGTAACTTGAGTGAAC 58.850 38.462 0.00 0.00 43.42 3.18
3630 3768 4.844267 ACTAACGAGTGTGTTTTTGATGC 58.156 39.130 0.00 0.00 33.41 3.91
3659 3801 2.350522 CGTGCAAACTCTCTATGGCTT 58.649 47.619 0.00 0.00 0.00 4.35
3682 3824 6.904463 TGTGGAACAGTATGAAGTAGTACA 57.096 37.500 2.52 0.00 45.67 2.90
3683 3825 7.476540 TGTGGAACAGTATGAAGTAGTACAT 57.523 36.000 2.52 0.00 45.67 2.29
3684 3826 7.544622 TGTGGAACAGTATGAAGTAGTACATC 58.455 38.462 2.52 0.34 45.67 3.06
3685 3827 6.691818 GTGGAACAGTATGAAGTAGTACATCG 59.308 42.308 2.52 0.00 41.80 3.84
3686 3828 6.183360 TGGAACAGTATGAAGTAGTACATCGG 60.183 42.308 2.52 0.00 39.69 4.18
3687 3829 6.183360 GGAACAGTATGAAGTAGTACATCGGT 60.183 42.308 2.52 0.00 39.69 4.69
3688 3830 6.770746 ACAGTATGAAGTAGTACATCGGTT 57.229 37.500 2.52 0.00 39.69 4.44
3689 3831 6.561614 ACAGTATGAAGTAGTACATCGGTTG 58.438 40.000 2.52 1.29 39.69 3.77
3690 3832 6.376299 ACAGTATGAAGTAGTACATCGGTTGA 59.624 38.462 2.52 0.00 39.69 3.18
3691 3833 6.913132 CAGTATGAAGTAGTACATCGGTTGAG 59.087 42.308 2.52 0.00 39.69 3.02
3692 3834 5.916661 ATGAAGTAGTACATCGGTTGAGT 57.083 39.130 2.52 0.00 0.00 3.41
3693 3835 7.772292 AGTATGAAGTAGTACATCGGTTGAGTA 59.228 37.037 2.52 0.00 0.00 2.59
3694 3836 6.822667 TGAAGTAGTACATCGGTTGAGTAA 57.177 37.500 2.52 0.00 0.00 2.24
3695 3837 6.849502 TGAAGTAGTACATCGGTTGAGTAAG 58.150 40.000 2.52 0.00 0.00 2.34
3696 3838 5.831702 AGTAGTACATCGGTTGAGTAAGG 57.168 43.478 2.52 0.00 0.00 2.69
3697 3839 5.259632 AGTAGTACATCGGTTGAGTAAGGT 58.740 41.667 2.52 0.00 0.00 3.50
3698 3840 4.451629 AGTACATCGGTTGAGTAAGGTG 57.548 45.455 0.00 0.00 0.00 4.00
3699 3841 2.762535 ACATCGGTTGAGTAAGGTGG 57.237 50.000 0.00 0.00 0.00 4.61
3700 3842 1.278127 ACATCGGTTGAGTAAGGTGGG 59.722 52.381 0.00 0.00 0.00 4.61
3701 3843 0.252197 ATCGGTTGAGTAAGGTGGGC 59.748 55.000 0.00 0.00 0.00 5.36
3702 3844 1.122632 TCGGTTGAGTAAGGTGGGCA 61.123 55.000 0.00 0.00 0.00 5.36
3703 3845 0.035439 CGGTTGAGTAAGGTGGGCAT 60.035 55.000 0.00 0.00 0.00 4.40
3704 3846 1.208535 CGGTTGAGTAAGGTGGGCATA 59.791 52.381 0.00 0.00 0.00 3.14
3705 3847 2.158813 CGGTTGAGTAAGGTGGGCATAT 60.159 50.000 0.00 0.00 0.00 1.78
3706 3848 3.684413 CGGTTGAGTAAGGTGGGCATATT 60.684 47.826 0.00 0.00 0.00 1.28
3707 3849 4.278310 GGTTGAGTAAGGTGGGCATATTT 58.722 43.478 0.00 0.00 0.00 1.40
3708 3850 4.709886 GGTTGAGTAAGGTGGGCATATTTT 59.290 41.667 0.00 0.00 0.00 1.82
3709 3851 5.889289 GGTTGAGTAAGGTGGGCATATTTTA 59.111 40.000 0.00 0.00 0.00 1.52
3710 3852 6.039382 GGTTGAGTAAGGTGGGCATATTTTAG 59.961 42.308 0.00 0.00 0.00 1.85
3711 3853 5.130350 TGAGTAAGGTGGGCATATTTTAGC 58.870 41.667 0.00 0.00 0.00 3.09
3725 3867 8.340230 GCATATTTTAGCCTGAATTTGTACAC 57.660 34.615 0.00 0.00 0.00 2.90
3726 3868 7.973388 GCATATTTTAGCCTGAATTTGTACACA 59.027 33.333 0.00 0.00 0.00 3.72
3727 3869 9.507280 CATATTTTAGCCTGAATTTGTACACAG 57.493 33.333 0.00 0.00 0.00 3.66
3728 3870 6.952773 TTTTAGCCTGAATTTGTACACAGT 57.047 33.333 9.58 0.00 0.00 3.55
3729 3871 6.952773 TTTAGCCTGAATTTGTACACAGTT 57.047 33.333 9.58 0.00 0.00 3.16
3730 3872 6.952773 TTAGCCTGAATTTGTACACAGTTT 57.047 33.333 9.58 1.91 0.00 2.66
3731 3873 5.438761 AGCCTGAATTTGTACACAGTTTC 57.561 39.130 9.58 5.32 0.00 2.78
3732 3874 4.887071 AGCCTGAATTTGTACACAGTTTCA 59.113 37.500 9.58 8.75 31.94 2.69
3733 3875 5.009010 AGCCTGAATTTGTACACAGTTTCAG 59.991 40.000 19.56 19.56 41.37 3.02
3735 3877 5.181690 TGAATTTGTACACAGTTTCAGGC 57.818 39.130 0.00 0.00 30.42 4.85
3736 3878 4.887071 TGAATTTGTACACAGTTTCAGGCT 59.113 37.500 0.00 0.00 30.42 4.58
3737 3879 5.359576 TGAATTTGTACACAGTTTCAGGCTT 59.640 36.000 0.00 0.00 30.42 4.35
3738 3880 4.630894 TTTGTACACAGTTTCAGGCTTG 57.369 40.909 0.00 0.00 0.00 4.01
3739 3881 3.552132 TGTACACAGTTTCAGGCTTGA 57.448 42.857 0.00 0.00 0.00 3.02
3740 3882 3.879998 TGTACACAGTTTCAGGCTTGAA 58.120 40.909 7.24 7.24 41.44 2.69
3751 3893 4.098914 TCAGGCTTGAAAATGTACAGGT 57.901 40.909 0.33 0.00 0.00 4.00
3752 3894 5.235850 TCAGGCTTGAAAATGTACAGGTA 57.764 39.130 0.33 0.00 0.00 3.08
3753 3895 5.815581 TCAGGCTTGAAAATGTACAGGTAT 58.184 37.500 0.33 0.00 0.00 2.73
3754 3896 5.647658 TCAGGCTTGAAAATGTACAGGTATG 59.352 40.000 0.33 0.00 0.00 2.39
3755 3897 5.415701 CAGGCTTGAAAATGTACAGGTATGT 59.584 40.000 0.33 0.00 43.76 2.29
3756 3898 6.597672 CAGGCTTGAAAATGTACAGGTATGTA 59.402 38.462 0.33 0.00 41.01 2.29
3757 3899 7.120579 CAGGCTTGAAAATGTACAGGTATGTAA 59.879 37.037 0.33 0.00 43.42 2.41
3758 3900 7.120726 AGGCTTGAAAATGTACAGGTATGTAAC 59.879 37.037 0.33 0.00 43.42 2.50
3759 3901 7.120726 GGCTTGAAAATGTACAGGTATGTAACT 59.879 37.037 0.33 0.00 43.42 2.24
3760 3902 8.512138 GCTTGAAAATGTACAGGTATGTAACTT 58.488 33.333 0.33 0.00 43.42 2.66
3761 3903 9.825972 CTTGAAAATGTACAGGTATGTAACTTG 57.174 33.333 0.33 0.00 43.42 3.16
3762 3904 9.562408 TTGAAAATGTACAGGTATGTAACTTGA 57.438 29.630 0.33 0.00 43.42 3.02
3763 3905 9.214957 TGAAAATGTACAGGTATGTAACTTGAG 57.785 33.333 0.33 0.00 43.42 3.02
3764 3906 9.216117 GAAAATGTACAGGTATGTAACTTGAGT 57.784 33.333 0.33 0.00 43.42 3.41
3768 3910 9.649167 ATGTACAGGTATGTAACTTGAGTAAAC 57.351 33.333 0.33 0.00 43.42 2.01
3769 3911 8.863086 TGTACAGGTATGTAACTTGAGTAAACT 58.137 33.333 0.00 0.00 43.42 2.66
3772 3914 9.702494 ACAGGTATGTAACTTGAGTAAACTAAC 57.298 33.333 0.00 0.00 37.36 2.34
3773 3915 8.857216 CAGGTATGTAACTTGAGTAAACTAACG 58.143 37.037 0.00 0.00 37.36 3.18
3774 3916 8.796475 AGGTATGTAACTTGAGTAAACTAACGA 58.204 33.333 0.00 0.00 0.00 3.85
3775 3917 9.070149 GGTATGTAACTTGAGTAAACTAACGAG 57.930 37.037 0.00 0.00 0.00 4.18
3776 3918 9.617975 GTATGTAACTTGAGTAAACTAACGAGT 57.382 33.333 0.00 0.00 37.59 4.18
3777 3919 7.919313 TGTAACTTGAGTAAACTAACGAGTG 57.081 36.000 0.00 0.00 35.52 3.51
3778 3920 7.483307 TGTAACTTGAGTAAACTAACGAGTGT 58.517 34.615 0.00 0.00 35.52 3.55
3779 3921 6.823678 AACTTGAGTAAACTAACGAGTGTG 57.176 37.500 0.00 0.00 35.52 3.82
3780 3922 5.899299 ACTTGAGTAAACTAACGAGTGTGT 58.101 37.500 0.00 0.00 35.52 3.72
3781 3923 6.335777 ACTTGAGTAAACTAACGAGTGTGTT 58.664 36.000 0.00 0.00 35.52 3.32
3782 3924 6.815142 ACTTGAGTAAACTAACGAGTGTGTTT 59.185 34.615 0.00 10.15 35.52 2.83
3783 3925 7.332678 ACTTGAGTAAACTAACGAGTGTGTTTT 59.667 33.333 10.42 0.00 35.52 2.43
3784 3926 7.599630 TGAGTAAACTAACGAGTGTGTTTTT 57.400 32.000 10.42 3.29 35.52 1.94
3785 3927 7.678226 TGAGTAAACTAACGAGTGTGTTTTTC 58.322 34.615 10.42 9.66 35.52 2.29
3786 3928 7.008440 AGTAAACTAACGAGTGTGTTTTTCC 57.992 36.000 10.42 3.27 35.52 3.13
3787 3929 6.820152 AGTAAACTAACGAGTGTGTTTTTCCT 59.180 34.615 10.42 4.78 35.52 3.36
3788 3930 5.479716 AACTAACGAGTGTGTTTTTCCTG 57.520 39.130 0.00 0.00 35.52 3.86
3789 3931 4.510571 ACTAACGAGTGTGTTTTTCCTGT 58.489 39.130 0.00 0.00 33.41 4.00
3790 3932 4.939439 ACTAACGAGTGTGTTTTTCCTGTT 59.061 37.500 0.00 0.00 33.41 3.16
3791 3933 4.776795 AACGAGTGTGTTTTTCCTGTTT 57.223 36.364 0.00 0.00 0.00 2.83
3792 3934 4.351131 ACGAGTGTGTTTTTCCTGTTTC 57.649 40.909 0.00 0.00 0.00 2.78
3793 3935 4.007659 ACGAGTGTGTTTTTCCTGTTTCT 58.992 39.130 0.00 0.00 0.00 2.52
3794 3936 4.094442 ACGAGTGTGTTTTTCCTGTTTCTC 59.906 41.667 0.00 0.00 0.00 2.87
3795 3937 4.332819 CGAGTGTGTTTTTCCTGTTTCTCT 59.667 41.667 0.00 0.00 0.00 3.10
3796 3938 5.163754 CGAGTGTGTTTTTCCTGTTTCTCTT 60.164 40.000 0.00 0.00 0.00 2.85
3797 3939 6.196079 AGTGTGTTTTTCCTGTTTCTCTTC 57.804 37.500 0.00 0.00 0.00 2.87
3798 3940 5.125578 AGTGTGTTTTTCCTGTTTCTCTTCC 59.874 40.000 0.00 0.00 0.00 3.46
3799 3941 5.013547 TGTGTTTTTCCTGTTTCTCTTCCA 58.986 37.500 0.00 0.00 0.00 3.53
3800 3942 5.478679 TGTGTTTTTCCTGTTTCTCTTCCAA 59.521 36.000 0.00 0.00 0.00 3.53
3801 3943 6.015010 TGTGTTTTTCCTGTTTCTCTTCCAAA 60.015 34.615 0.00 0.00 0.00 3.28
3802 3944 6.310467 GTGTTTTTCCTGTTTCTCTTCCAAAC 59.690 38.462 0.00 0.00 34.79 2.93
3803 3945 6.210584 TGTTTTTCCTGTTTCTCTTCCAAACT 59.789 34.615 0.00 0.00 35.19 2.66
3804 3946 6.451064 TTTTCCTGTTTCTCTTCCAAACTC 57.549 37.500 0.00 0.00 35.19 3.01
3805 3947 5.373812 TTCCTGTTTCTCTTCCAAACTCT 57.626 39.130 0.00 0.00 35.19 3.24
3806 3948 4.962155 TCCTGTTTCTCTTCCAAACTCTC 58.038 43.478 0.00 0.00 35.19 3.20
3807 3949 4.656112 TCCTGTTTCTCTTCCAAACTCTCT 59.344 41.667 0.00 0.00 35.19 3.10
3808 3950 5.839063 TCCTGTTTCTCTTCCAAACTCTCTA 59.161 40.000 0.00 0.00 35.19 2.43
3809 3951 6.498651 TCCTGTTTCTCTTCCAAACTCTCTAT 59.501 38.462 0.00 0.00 35.19 1.98
3810 3952 7.016661 TCCTGTTTCTCTTCCAAACTCTCTATT 59.983 37.037 0.00 0.00 35.19 1.73
3811 3953 7.118971 CCTGTTTCTCTTCCAAACTCTCTATTG 59.881 40.741 0.00 0.00 35.19 1.90
3812 3954 6.428159 TGTTTCTCTTCCAAACTCTCTATTGC 59.572 38.462 0.00 0.00 35.19 3.56
3813 3955 6.365970 TTCTCTTCCAAACTCTCTATTGCT 57.634 37.500 0.00 0.00 0.00 3.91
3814 3956 6.365970 TCTCTTCCAAACTCTCTATTGCTT 57.634 37.500 0.00 0.00 0.00 3.91
3815 3957 6.773638 TCTCTTCCAAACTCTCTATTGCTTT 58.226 36.000 0.00 0.00 0.00 3.51
3816 3958 6.652481 TCTCTTCCAAACTCTCTATTGCTTTG 59.348 38.462 0.00 0.00 0.00 2.77
3817 3959 6.299141 TCTTCCAAACTCTCTATTGCTTTGT 58.701 36.000 0.00 0.00 0.00 2.83
3818 3960 5.947228 TCCAAACTCTCTATTGCTTTGTG 57.053 39.130 0.00 0.00 0.00 3.33
3819 3961 4.761739 TCCAAACTCTCTATTGCTTTGTGG 59.238 41.667 0.00 0.00 0.00 4.17
3820 3962 4.761739 CCAAACTCTCTATTGCTTTGTGGA 59.238 41.667 0.00 0.00 0.00 4.02
3821 3963 5.241506 CCAAACTCTCTATTGCTTTGTGGAA 59.758 40.000 0.00 0.00 0.00 3.53
3822 3964 5.948992 AACTCTCTATTGCTTTGTGGAAC 57.051 39.130 0.00 0.00 37.35 3.62
3823 3965 3.997021 ACTCTCTATTGCTTTGTGGAACG 59.003 43.478 0.00 0.00 42.39 3.95
3824 3966 3.334691 TCTCTATTGCTTTGTGGAACGG 58.665 45.455 0.00 0.00 42.39 4.44
3825 3967 3.074412 CTCTATTGCTTTGTGGAACGGT 58.926 45.455 0.00 0.00 42.39 4.83
3826 3968 3.071479 TCTATTGCTTTGTGGAACGGTC 58.929 45.455 0.00 0.00 42.39 4.79
3827 3969 1.981256 ATTGCTTTGTGGAACGGTCT 58.019 45.000 0.00 0.00 42.39 3.85
3828 3970 1.021202 TTGCTTTGTGGAACGGTCTG 58.979 50.000 0.00 0.00 42.39 3.51
3829 3971 0.179234 TGCTTTGTGGAACGGTCTGA 59.821 50.000 0.00 0.00 42.39 3.27
3870 4012 5.874810 CAGGCAGCTTAGTAACATGTAGAAA 59.125 40.000 0.00 0.00 0.00 2.52
3872 4014 6.940298 AGGCAGCTTAGTAACATGTAGAAAAA 59.060 34.615 0.00 0.00 0.00 1.94
3873 4015 7.611855 AGGCAGCTTAGTAACATGTAGAAAAAT 59.388 33.333 0.00 0.00 0.00 1.82
3874 4016 8.889717 GGCAGCTTAGTAACATGTAGAAAAATA 58.110 33.333 0.00 0.00 0.00 1.40
3904 4046 1.202915 TCAGAAGCAATGGCCTGAACA 60.203 47.619 3.32 0.00 42.56 3.18
3910 4052 1.542492 CAATGGCCTGAACAAGCTCT 58.458 50.000 3.32 0.00 0.00 4.09
3915 4057 0.604780 GCCTGAACAAGCTCTGCTCA 60.605 55.000 0.00 0.00 38.25 4.26
3916 4058 1.888215 CCTGAACAAGCTCTGCTCAA 58.112 50.000 0.00 0.00 38.25 3.02
3917 4059 2.434428 CCTGAACAAGCTCTGCTCAAT 58.566 47.619 0.00 0.00 38.25 2.57
3920 4062 2.224597 TGAACAAGCTCTGCTCAATGGA 60.225 45.455 0.00 0.00 38.25 3.41
3921 4063 2.803030 ACAAGCTCTGCTCAATGGAT 57.197 45.000 0.00 0.00 38.25 3.41
3922 4064 3.920231 ACAAGCTCTGCTCAATGGATA 57.080 42.857 0.00 0.00 38.25 2.59
3923 4065 3.539604 ACAAGCTCTGCTCAATGGATAC 58.460 45.455 0.00 0.00 38.25 2.24
3924 4066 2.877168 CAAGCTCTGCTCAATGGATACC 59.123 50.000 0.00 0.00 38.25 2.73
3925 4067 2.406559 AGCTCTGCTCAATGGATACCT 58.593 47.619 0.00 0.00 30.62 3.08
3950 4097 1.144936 GCTCTGCTATTCTGCGGGT 59.855 57.895 0.00 0.00 39.62 5.28
3952 4099 0.249657 CTCTGCTATTCTGCGGGTCC 60.250 60.000 0.00 0.00 39.62 4.46
3953 4100 0.687757 TCTGCTATTCTGCGGGTCCT 60.688 55.000 0.00 0.00 39.62 3.85
3954 4101 0.249657 CTGCTATTCTGCGGGTCCTC 60.250 60.000 0.00 0.00 35.80 3.71
3955 4102 0.975556 TGCTATTCTGCGGGTCCTCA 60.976 55.000 0.00 0.00 35.36 3.86
3963 4110 3.710722 CGGGTCCTCAAGGCTGCT 61.711 66.667 0.00 0.00 34.44 4.24
3988 4135 2.529744 GGGGACACCTGAACTGCCT 61.530 63.158 0.00 0.00 36.80 4.75
4000 4147 4.334759 CCTGAACTGCCTATCACAAAGATG 59.665 45.833 0.00 0.00 37.57 2.90
4017 4164 2.363147 GGAGCTCCACCCGAGACT 60.363 66.667 28.43 0.00 41.63 3.24
4053 4202 3.446442 AAGAATTGGACATGCTGGAGT 57.554 42.857 0.00 0.00 0.00 3.85
4074 4223 1.224075 CCTAGCTCACGCCAATCATG 58.776 55.000 0.00 0.00 36.60 3.07
4103 4252 2.364972 AAAACAACACAGGAGAGGGG 57.635 50.000 0.00 0.00 0.00 4.79
4104 4253 0.478507 AAACAACACAGGAGAGGGGG 59.521 55.000 0.00 0.00 0.00 5.40
4105 4254 0.697854 AACAACACAGGAGAGGGGGT 60.698 55.000 0.00 0.00 0.00 4.95
4106 4255 0.697854 ACAACACAGGAGAGGGGGTT 60.698 55.000 0.00 0.00 0.00 4.11
4107 4256 0.478507 CAACACAGGAGAGGGGGTTT 59.521 55.000 0.00 0.00 0.00 3.27
4108 4257 0.478507 AACACAGGAGAGGGGGTTTG 59.521 55.000 0.00 0.00 0.00 2.93
4109 4258 1.380302 CACAGGAGAGGGGGTTTGG 59.620 63.158 0.00 0.00 0.00 3.28
4110 4259 1.852626 ACAGGAGAGGGGGTTTGGG 60.853 63.158 0.00 0.00 0.00 4.12
4111 4260 2.204306 AGGAGAGGGGGTTTGGGG 60.204 66.667 0.00 0.00 0.00 4.96
4112 4261 2.534533 GGAGAGGGGGTTTGGGGT 60.535 66.667 0.00 0.00 0.00 4.95
4113 4262 2.763902 GAGAGGGGGTTTGGGGTG 59.236 66.667 0.00 0.00 0.00 4.61
4114 4263 2.037677 AGAGGGGGTTTGGGGTGT 60.038 61.111 0.00 0.00 0.00 4.16
4115 4264 0.843343 GAGAGGGGGTTTGGGGTGTA 60.843 60.000 0.00 0.00 0.00 2.90
4116 4265 1.138228 AGAGGGGGTTTGGGGTGTAC 61.138 60.000 0.00 0.00 0.00 2.90
4117 4266 2.034532 GGGGGTTTGGGGTGTACG 59.965 66.667 0.00 0.00 0.00 3.67
4118 4267 2.527893 GGGGGTTTGGGGTGTACGA 61.528 63.158 0.00 0.00 0.00 3.43
4119 4268 1.687014 GGGGTTTGGGGTGTACGAT 59.313 57.895 0.00 0.00 0.00 3.73
4120 4269 0.678684 GGGGTTTGGGGTGTACGATG 60.679 60.000 0.00 0.00 0.00 3.84
4121 4270 0.678684 GGGTTTGGGGTGTACGATGG 60.679 60.000 0.00 0.00 0.00 3.51
4122 4271 1.310216 GGTTTGGGGTGTACGATGGC 61.310 60.000 0.00 0.00 0.00 4.40
4123 4272 1.001887 TTTGGGGTGTACGATGGCC 60.002 57.895 0.00 0.00 0.00 5.36
4124 4273 1.780107 TTTGGGGTGTACGATGGCCA 61.780 55.000 8.56 8.56 0.00 5.36
4125 4274 1.567208 TTGGGGTGTACGATGGCCAT 61.567 55.000 20.96 20.96 0.00 4.40
4126 4275 1.226262 GGGGTGTACGATGGCCATT 59.774 57.895 21.84 7.53 0.00 3.16
4127 4276 0.395173 GGGGTGTACGATGGCCATTT 60.395 55.000 21.84 12.85 0.00 2.32
4128 4277 1.470051 GGGTGTACGATGGCCATTTT 58.530 50.000 21.84 12.46 0.00 1.82
4129 4278 2.645802 GGGTGTACGATGGCCATTTTA 58.354 47.619 21.84 11.36 0.00 1.52
4130 4279 3.219281 GGGTGTACGATGGCCATTTTAT 58.781 45.455 21.84 8.39 0.00 1.40
4131 4280 3.004315 GGGTGTACGATGGCCATTTTATG 59.996 47.826 21.84 10.22 0.00 1.90
4146 4295 6.876155 CCATTTTATGGGTTGTCATTCATCA 58.124 36.000 0.00 0.00 46.86 3.07
4147 4296 7.329499 CCATTTTATGGGTTGTCATTCATCAA 58.671 34.615 0.00 0.00 46.86 2.57
4148 4297 7.493320 CCATTTTATGGGTTGTCATTCATCAAG 59.507 37.037 0.00 0.00 46.86 3.02
4149 4298 7.773489 TTTTATGGGTTGTCATTCATCAAGA 57.227 32.000 0.00 0.00 0.00 3.02
4150 4299 7.395190 TTTATGGGTTGTCATTCATCAAGAG 57.605 36.000 0.00 0.00 0.00 2.85
4151 4300 4.639078 TGGGTTGTCATTCATCAAGAGA 57.361 40.909 0.00 0.00 0.00 3.10
4152 4301 4.984295 TGGGTTGTCATTCATCAAGAGAA 58.016 39.130 0.00 0.00 0.00 2.87
4153 4302 5.384336 TGGGTTGTCATTCATCAAGAGAAA 58.616 37.500 0.00 0.00 0.00 2.52
4154 4303 5.832595 TGGGTTGTCATTCATCAAGAGAAAA 59.167 36.000 0.00 0.00 0.00 2.29
4155 4304 6.016024 TGGGTTGTCATTCATCAAGAGAAAAG 60.016 38.462 0.00 0.00 0.00 2.27
4156 4305 6.385033 GGTTGTCATTCATCAAGAGAAAAGG 58.615 40.000 0.00 0.00 0.00 3.11
4157 4306 5.633830 TGTCATTCATCAAGAGAAAAGGC 57.366 39.130 0.00 0.00 0.00 4.35
4158 4307 5.072055 TGTCATTCATCAAGAGAAAAGGCA 58.928 37.500 0.00 0.00 0.00 4.75
4159 4308 5.048504 TGTCATTCATCAAGAGAAAAGGCAC 60.049 40.000 0.00 0.00 0.00 5.01
4160 4309 5.048504 GTCATTCATCAAGAGAAAAGGCACA 60.049 40.000 0.00 0.00 0.00 4.57
4161 4310 5.713389 TCATTCATCAAGAGAAAAGGCACAT 59.287 36.000 0.00 0.00 0.00 3.21
4162 4311 5.381174 TTCATCAAGAGAAAAGGCACATG 57.619 39.130 0.00 0.00 0.00 3.21
4163 4312 3.760151 TCATCAAGAGAAAAGGCACATGG 59.240 43.478 0.00 0.00 0.00 3.66
4164 4313 3.507162 TCAAGAGAAAAGGCACATGGA 57.493 42.857 0.00 0.00 0.00 3.41
4165 4314 4.038271 TCAAGAGAAAAGGCACATGGAT 57.962 40.909 0.00 0.00 0.00 3.41
4166 4315 4.410099 TCAAGAGAAAAGGCACATGGATT 58.590 39.130 0.00 0.00 0.00 3.01
4167 4316 4.834496 TCAAGAGAAAAGGCACATGGATTT 59.166 37.500 0.00 0.00 0.00 2.17
4168 4317 5.305128 TCAAGAGAAAAGGCACATGGATTTT 59.695 36.000 0.00 0.00 0.00 1.82
4169 4318 5.813513 AGAGAAAAGGCACATGGATTTTT 57.186 34.783 0.00 0.00 0.00 1.94
4198 4347 4.210307 GAAGGCTCGAGAAAGGGC 57.790 61.111 18.75 1.02 36.75 5.19
4202 4351 3.771160 GCTCGAGAAAGGGCCCGA 61.771 66.667 18.44 7.84 0.00 5.14
4203 4352 2.184579 CTCGAGAAAGGGCCCGAC 59.815 66.667 18.44 12.06 0.00 4.79
4204 4353 2.283676 TCGAGAAAGGGCCCGACT 60.284 61.111 18.44 17.02 0.00 4.18
4205 4354 1.889530 CTCGAGAAAGGGCCCGACTT 61.890 60.000 18.44 11.65 0.00 3.01
4206 4355 1.003718 CGAGAAAGGGCCCGACTTT 60.004 57.895 18.44 12.19 40.61 2.66
4207 4356 1.298859 CGAGAAAGGGCCCGACTTTG 61.299 60.000 18.44 9.89 38.21 2.77
4208 4357 0.036306 GAGAAAGGGCCCGACTTTGA 59.964 55.000 18.44 0.00 38.21 2.69
4209 4358 0.476771 AGAAAGGGCCCGACTTTGAA 59.523 50.000 18.44 0.00 38.21 2.69
4210 4359 1.075536 AGAAAGGGCCCGACTTTGAAT 59.924 47.619 18.44 0.00 38.21 2.57
4211 4360 1.893137 GAAAGGGCCCGACTTTGAATT 59.107 47.619 18.44 0.00 38.21 2.17
4212 4361 2.891191 AAGGGCCCGACTTTGAATTA 57.109 45.000 18.44 0.00 0.00 1.40
4213 4362 2.891191 AGGGCCCGACTTTGAATTAA 57.109 45.000 18.44 0.00 0.00 1.40
4214 4363 2.443416 AGGGCCCGACTTTGAATTAAC 58.557 47.619 18.44 0.00 0.00 2.01
4215 4364 2.164338 GGGCCCGACTTTGAATTAACA 58.836 47.619 5.69 0.00 0.00 2.41
4216 4365 2.559231 GGGCCCGACTTTGAATTAACAA 59.441 45.455 5.69 0.00 0.00 2.83
4217 4366 3.006003 GGGCCCGACTTTGAATTAACAAA 59.994 43.478 5.69 0.00 37.98 2.83
4227 4376 7.120789 CTTTGAATTAACAAAGCCATCAACC 57.879 36.000 6.67 0.00 46.05 3.77
4228 4377 4.804108 TGAATTAACAAAGCCATCAACCG 58.196 39.130 0.00 0.00 0.00 4.44
4229 4378 3.866883 ATTAACAAAGCCATCAACCGG 57.133 42.857 0.00 0.00 0.00 5.28
4235 4384 4.424711 GCCATCAACCGGCCAGGA 62.425 66.667 18.74 3.02 44.22 3.86
4236 4385 2.597340 CCATCAACCGGCCAGGAT 59.403 61.111 18.74 5.67 45.00 3.24
4237 4386 1.076777 CCATCAACCGGCCAGGATT 60.077 57.895 18.74 7.79 45.00 3.01
4238 4387 0.182537 CCATCAACCGGCCAGGATTA 59.817 55.000 18.74 1.01 45.00 1.75
4239 4388 1.308998 CATCAACCGGCCAGGATTAC 58.691 55.000 18.74 0.00 45.00 1.89
4240 4389 0.916086 ATCAACCGGCCAGGATTACA 59.084 50.000 18.74 0.75 45.00 2.41
4241 4390 0.035820 TCAACCGGCCAGGATTACAC 60.036 55.000 18.74 0.00 45.00 2.90
4242 4391 0.322098 CAACCGGCCAGGATTACACA 60.322 55.000 18.74 0.00 45.00 3.72
4243 4392 0.402504 AACCGGCCAGGATTACACAA 59.597 50.000 18.74 0.00 45.00 3.33
4244 4393 0.035439 ACCGGCCAGGATTACACAAG 60.035 55.000 18.74 0.00 45.00 3.16
4245 4394 0.748005 CCGGCCAGGATTACACAAGG 60.748 60.000 2.24 0.00 45.00 3.61
4246 4395 1.376609 CGGCCAGGATTACACAAGGC 61.377 60.000 2.24 0.00 41.29 4.35
4247 4396 2.493547 GCCAGGATTACACAAGGCC 58.506 57.895 0.00 0.00 36.17 5.19
4248 4397 0.323360 GCCAGGATTACACAAGGCCA 60.323 55.000 5.01 0.00 36.17 5.36
4249 4398 1.463674 CCAGGATTACACAAGGCCAC 58.536 55.000 5.01 0.00 0.00 5.01
4250 4399 1.463674 CAGGATTACACAAGGCCACC 58.536 55.000 5.01 0.00 0.00 4.61
4251 4400 1.072266 AGGATTACACAAGGCCACCA 58.928 50.000 5.01 0.00 0.00 4.17
4252 4401 1.427368 AGGATTACACAAGGCCACCAA 59.573 47.619 5.01 0.00 0.00 3.67
4253 4402 1.818674 GGATTACACAAGGCCACCAAG 59.181 52.381 5.01 0.00 0.00 3.61
4254 4403 1.202348 GATTACACAAGGCCACCAAGC 59.798 52.381 5.01 0.00 0.00 4.01
4255 4404 0.106469 TTACACAAGGCCACCAAGCA 60.106 50.000 5.01 0.00 0.00 3.91
4256 4405 0.112218 TACACAAGGCCACCAAGCAT 59.888 50.000 5.01 0.00 0.00 3.79
4257 4406 1.290955 CACAAGGCCACCAAGCATG 59.709 57.895 5.01 0.00 0.00 4.06
4258 4407 1.153524 ACAAGGCCACCAAGCATGA 59.846 52.632 5.01 0.00 0.00 3.07
4259 4408 0.896940 ACAAGGCCACCAAGCATGAG 60.897 55.000 5.01 0.00 0.00 2.90
4260 4409 1.980772 AAGGCCACCAAGCATGAGC 60.981 57.895 5.01 0.00 42.56 4.26
4270 4419 4.185413 GCATGAGCGACCGAAAGA 57.815 55.556 0.00 0.00 0.00 2.52
4271 4420 2.682893 GCATGAGCGACCGAAAGAT 58.317 52.632 0.00 0.00 0.00 2.40
4272 4421 1.852942 GCATGAGCGACCGAAAGATA 58.147 50.000 0.00 0.00 0.00 1.98
4273 4422 1.523095 GCATGAGCGACCGAAAGATAC 59.477 52.381 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.170584 GCGGAGAAATAATAACATAAAAAGCTC 57.829 33.333 0.00 0.00 0.00 4.09
5 6 8.682710 TGCGGAGAAATAATAACATAAAAAGCT 58.317 29.630 0.00 0.00 0.00 3.74
6 7 8.850454 TGCGGAGAAATAATAACATAAAAAGC 57.150 30.769 0.00 0.00 0.00 3.51
12 13 9.549078 TGTAACATGCGGAGAAATAATAACATA 57.451 29.630 0.00 0.00 0.00 2.29
13 14 8.445275 TGTAACATGCGGAGAAATAATAACAT 57.555 30.769 0.00 0.00 0.00 2.71
14 15 7.851387 TGTAACATGCGGAGAAATAATAACA 57.149 32.000 0.00 0.00 0.00 2.41
15 16 8.556194 TCATGTAACATGCGGAGAAATAATAAC 58.444 33.333 0.00 0.00 0.00 1.89
16 17 8.669946 TCATGTAACATGCGGAGAAATAATAA 57.330 30.769 0.00 0.00 0.00 1.40
17 18 8.846943 ATCATGTAACATGCGGAGAAATAATA 57.153 30.769 0.00 0.00 0.00 0.98
18 19 7.750229 ATCATGTAACATGCGGAGAAATAAT 57.250 32.000 0.00 0.00 0.00 1.28
19 20 8.669946 TTATCATGTAACATGCGGAGAAATAA 57.330 30.769 0.00 0.00 0.00 1.40
20 21 8.846943 ATTATCATGTAACATGCGGAGAAATA 57.153 30.769 0.00 0.00 0.00 1.40
21 22 7.750229 ATTATCATGTAACATGCGGAGAAAT 57.250 32.000 0.00 0.00 0.00 2.17
22 23 7.416817 CAATTATCATGTAACATGCGGAGAAA 58.583 34.615 0.00 0.00 0.00 2.52
23 24 6.017192 CCAATTATCATGTAACATGCGGAGAA 60.017 38.462 0.00 0.00 0.00 2.87
24 25 5.469760 CCAATTATCATGTAACATGCGGAGA 59.530 40.000 0.00 0.00 0.00 3.71
25 26 5.469760 TCCAATTATCATGTAACATGCGGAG 59.530 40.000 0.00 0.00 0.00 4.63
26 27 5.372373 TCCAATTATCATGTAACATGCGGA 58.628 37.500 0.00 0.00 0.00 5.54
27 28 5.687770 TCCAATTATCATGTAACATGCGG 57.312 39.130 0.00 0.00 0.00 5.69
28 29 6.583427 CCAATCCAATTATCATGTAACATGCG 59.417 38.462 0.00 0.00 0.00 4.73
29 30 6.869913 CCCAATCCAATTATCATGTAACATGC 59.130 38.462 0.00 0.00 0.00 4.06
30 31 7.954835 ACCCAATCCAATTATCATGTAACATG 58.045 34.615 0.00 0.00 0.00 3.21
31 32 9.300681 CTACCCAATCCAATTATCATGTAACAT 57.699 33.333 0.00 0.00 0.00 2.71
32 33 8.498575 TCTACCCAATCCAATTATCATGTAACA 58.501 33.333 0.00 0.00 0.00 2.41
33 34 8.918202 TCTACCCAATCCAATTATCATGTAAC 57.082 34.615 0.00 0.00 0.00 2.50
36 37 9.082313 GAAATCTACCCAATCCAATTATCATGT 57.918 33.333 0.00 0.00 0.00 3.21
37 38 8.526147 GGAAATCTACCCAATCCAATTATCATG 58.474 37.037 0.00 0.00 0.00 3.07
38 39 8.459394 AGGAAATCTACCCAATCCAATTATCAT 58.541 33.333 0.00 0.00 32.47 2.45
39 40 7.825709 AGGAAATCTACCCAATCCAATTATCA 58.174 34.615 0.00 0.00 32.47 2.15
40 41 8.712228 AAGGAAATCTACCCAATCCAATTATC 57.288 34.615 0.00 0.00 32.47 1.75
41 42 9.506042 AAAAGGAAATCTACCCAATCCAATTAT 57.494 29.630 0.00 0.00 32.47 1.28
42 43 8.909423 AAAAGGAAATCTACCCAATCCAATTA 57.091 30.769 0.00 0.00 32.47 1.40
43 44 7.813087 AAAAGGAAATCTACCCAATCCAATT 57.187 32.000 0.00 0.00 32.47 2.32
44 45 7.813087 AAAAAGGAAATCTACCCAATCCAAT 57.187 32.000 0.00 0.00 32.47 3.16
77 78 5.186256 TGAGGATGGCCACACTATAAAAA 57.814 39.130 8.16 0.00 36.29 1.94
78 79 4.853468 TGAGGATGGCCACACTATAAAA 57.147 40.909 8.16 0.00 36.29 1.52
79 80 5.387113 AATGAGGATGGCCACACTATAAA 57.613 39.130 8.16 0.00 37.60 1.40
80 81 5.387113 AAATGAGGATGGCCACACTATAA 57.613 39.130 8.16 0.00 37.60 0.98
81 82 5.387113 AAAATGAGGATGGCCACACTATA 57.613 39.130 8.16 2.36 37.60 1.31
82 83 3.959495 AAATGAGGATGGCCACACTAT 57.041 42.857 8.16 0.00 37.60 2.12
83 84 3.737559 AAAATGAGGATGGCCACACTA 57.262 42.857 8.16 0.00 37.60 2.74
84 85 2.610438 AAAATGAGGATGGCCACACT 57.390 45.000 8.16 9.68 37.60 3.55
85 86 4.202151 GGAATAAAATGAGGATGGCCACAC 60.202 45.833 8.16 3.34 37.60 3.82
86 87 3.960102 GGAATAAAATGAGGATGGCCACA 59.040 43.478 8.16 0.44 39.15 4.17
87 88 4.218312 AGGAATAAAATGAGGATGGCCAC 58.782 43.478 8.16 1.35 36.29 5.01
88 89 4.541250 AGGAATAAAATGAGGATGGCCA 57.459 40.909 8.56 8.56 36.29 5.36
89 90 5.880901 TCTAGGAATAAAATGAGGATGGCC 58.119 41.667 0.00 0.00 0.00 5.36
90 91 7.170965 TGATCTAGGAATAAAATGAGGATGGC 58.829 38.462 0.00 0.00 0.00 4.40
91 92 9.393512 GATGATCTAGGAATAAAATGAGGATGG 57.606 37.037 0.00 0.00 0.00 3.51
92 93 9.393512 GGATGATCTAGGAATAAAATGAGGATG 57.606 37.037 0.00 0.00 0.00 3.51
93 94 8.263640 CGGATGATCTAGGAATAAAATGAGGAT 58.736 37.037 0.00 0.00 0.00 3.24
94 95 7.615403 CGGATGATCTAGGAATAAAATGAGGA 58.385 38.462 0.00 0.00 0.00 3.71
95 96 6.314896 GCGGATGATCTAGGAATAAAATGAGG 59.685 42.308 0.00 0.00 0.00 3.86
96 97 7.102346 AGCGGATGATCTAGGAATAAAATGAG 58.898 38.462 0.00 0.00 0.00 2.90
97 98 7.009179 AGCGGATGATCTAGGAATAAAATGA 57.991 36.000 0.00 0.00 0.00 2.57
98 99 8.954950 ATAGCGGATGATCTAGGAATAAAATG 57.045 34.615 0.00 0.00 0.00 2.32
99 100 8.207545 GGATAGCGGATGATCTAGGAATAAAAT 58.792 37.037 0.00 0.00 0.00 1.82
112 113 3.576078 TTGTTTGGGATAGCGGATGAT 57.424 42.857 0.00 0.00 0.00 2.45
116 117 2.865079 TGTTTTGTTTGGGATAGCGGA 58.135 42.857 0.00 0.00 0.00 5.54
119 120 7.625828 AGTACTATGTTTTGTTTGGGATAGC 57.374 36.000 0.00 0.00 0.00 2.97
122 123 8.079809 CGAAAAGTACTATGTTTTGTTTGGGAT 58.920 33.333 0.00 0.00 0.00 3.85
137 138 8.449251 AACATTTGGGTTTACGAAAAGTACTA 57.551 30.769 0.00 0.00 34.56 1.82
139 140 9.172820 CTTAACATTTGGGTTTACGAAAAGTAC 57.827 33.333 0.00 0.00 34.56 2.73
146 147 6.427547 CAGGTACTTAACATTTGGGTTTACGA 59.572 38.462 0.00 0.00 34.60 3.43
149 150 7.945664 ACATCAGGTACTTAACATTTGGGTTTA 59.054 33.333 0.00 0.00 34.60 2.01
168 169 3.119291 GTTGCTCGTATCTGACATCAGG 58.881 50.000 8.99 0.00 43.91 3.86
171 172 3.492383 CCATGTTGCTCGTATCTGACATC 59.508 47.826 0.00 0.00 0.00 3.06
172 173 3.461061 CCATGTTGCTCGTATCTGACAT 58.539 45.455 0.00 0.00 0.00 3.06
173 174 2.892374 CCATGTTGCTCGTATCTGACA 58.108 47.619 0.00 0.00 0.00 3.58
175 176 1.206849 TGCCATGTTGCTCGTATCTGA 59.793 47.619 0.00 0.00 0.00 3.27
179 180 3.016031 TGATTTGCCATGTTGCTCGTAT 58.984 40.909 0.00 0.00 0.00 3.06
182 183 2.350899 TTGATTTGCCATGTTGCTCG 57.649 45.000 0.00 0.00 0.00 5.03
202 203 8.076178 GCGTCACTAGAATTGCCATAAAAATAT 58.924 33.333 0.00 0.00 0.00 1.28
203 204 7.066404 TGCGTCACTAGAATTGCCATAAAAATA 59.934 33.333 0.00 0.00 0.00 1.40
204 205 6.127758 TGCGTCACTAGAATTGCCATAAAAAT 60.128 34.615 0.00 0.00 0.00 1.82
210 211 2.401583 TGCGTCACTAGAATTGCCAT 57.598 45.000 0.00 0.00 0.00 4.40
213 214 2.346803 TCCTTGCGTCACTAGAATTGC 58.653 47.619 0.00 0.00 0.00 3.56
222 223 1.512926 ACTTGTCATCCTTGCGTCAC 58.487 50.000 0.00 0.00 0.00 3.67
226 227 5.088739 GTCAATTAACTTGTCATCCTTGCG 58.911 41.667 0.00 0.00 36.20 4.85
233 234 6.318648 ACAGTGTGTGTCAATTAACTTGTCAT 59.681 34.615 0.00 0.00 35.76 3.06
244 245 7.066887 TGACAGAAAATTACAGTGTGTGTCAAT 59.933 33.333 5.88 0.00 38.96 2.57
267 268 5.985781 TCGTGCTTGAGTTTATTTTCTGAC 58.014 37.500 0.00 0.00 0.00 3.51
271 272 7.322938 GGTAACTTCGTGCTTGAGTTTATTTTC 59.677 37.037 0.00 0.00 0.00 2.29
288 289 2.388232 GGCAGGCACGGTAACTTCG 61.388 63.158 0.00 0.00 0.00 3.79
295 296 0.889186 CTTTAGTTGGCAGGCACGGT 60.889 55.000 0.00 0.00 0.00 4.83
326 327 3.192001 TCCGATAGCAAGTTTAGTGACGT 59.808 43.478 0.00 0.00 0.00 4.34
340 341 3.968724 GCAAATCAAACGATTCCGATAGC 59.031 43.478 0.00 0.00 39.50 2.97
350 351 0.317436 GCACACGGCAAATCAAACGA 60.317 50.000 0.00 0.00 43.97 3.85
364 365 0.179119 AACGCCCGATACTAGCACAC 60.179 55.000 0.00 0.00 0.00 3.82
396 405 3.870419 ACGAACACGTAAGGCTTTTTACA 59.130 39.130 4.45 0.00 46.39 2.41
399 408 2.679336 ACACGAACACGTAAGGCTTTTT 59.321 40.909 4.45 0.00 46.39 1.94
475 484 4.953579 AGGCAAAGTGAACCAAAAGTAAGA 59.046 37.500 0.00 0.00 0.00 2.10
500 510 1.292242 AGTTAGGAGGGAGGATGCAGA 59.708 52.381 0.00 0.00 0.00 4.26
513 523 1.275291 CTCGGCCACTTTCAGTTAGGA 59.725 52.381 2.24 0.00 0.00 2.94
526 536 2.885113 CTGACACGATCTCGGCCA 59.115 61.111 2.24 0.00 44.95 5.36
529 539 1.869574 CACGCTGACACGATCTCGG 60.870 63.158 4.44 0.00 44.95 4.63
530 540 1.154207 ACACGCTGACACGATCTCG 60.154 57.895 0.00 0.00 46.33 4.04
588 607 0.800631 ATGATCAGCTGTTGTGCACG 59.199 50.000 14.67 0.00 34.99 5.34
589 608 3.293311 AAATGATCAGCTGTTGTGCAC 57.707 42.857 14.67 10.75 34.99 4.57
590 609 3.119743 GCTAAATGATCAGCTGTTGTGCA 60.120 43.478 14.67 6.42 34.86 4.57
591 610 3.432782 GCTAAATGATCAGCTGTTGTGC 58.567 45.455 14.67 5.94 34.86 4.57
592 611 3.441222 TGGCTAAATGATCAGCTGTTGTG 59.559 43.478 14.67 0.00 37.91 3.33
593 612 3.689347 TGGCTAAATGATCAGCTGTTGT 58.311 40.909 14.67 0.78 37.91 3.32
594 613 3.943381 TCTGGCTAAATGATCAGCTGTTG 59.057 43.478 14.67 0.00 37.91 3.33
607 626 1.535462 GTGCGCTCTTTTCTGGCTAAA 59.465 47.619 9.73 0.00 0.00 1.85
648 667 4.700365 TCGTCCTGCTCGTGCGTG 62.700 66.667 4.84 0.36 43.34 5.34
649 668 4.406173 CTCGTCCTGCTCGTGCGT 62.406 66.667 4.84 0.00 43.34 5.24
651 670 4.803426 CCCTCGTCCTGCTCGTGC 62.803 72.222 1.71 1.71 40.20 5.34
652 671 3.374402 ACCCTCGTCCTGCTCGTG 61.374 66.667 0.00 0.00 0.00 4.35
653 672 3.374402 CACCCTCGTCCTGCTCGT 61.374 66.667 0.00 0.00 0.00 4.18
654 673 3.062466 TCACCCTCGTCCTGCTCG 61.062 66.667 0.00 0.00 0.00 5.03
655 674 2.574399 GTCACCCTCGTCCTGCTC 59.426 66.667 0.00 0.00 0.00 4.26
656 675 3.374402 CGTCACCCTCGTCCTGCT 61.374 66.667 0.00 0.00 0.00 4.24
657 676 3.343788 CTCGTCACCCTCGTCCTGC 62.344 68.421 0.00 0.00 0.00 4.85
659 678 1.377463 CTCTCGTCACCCTCGTCCT 60.377 63.158 0.00 0.00 0.00 3.85
660 679 1.646624 GACTCTCGTCACCCTCGTCC 61.647 65.000 0.00 0.00 39.98 4.79
661 680 0.674269 AGACTCTCGTCACCCTCGTC 60.674 60.000 0.00 0.00 42.73 4.20
662 681 0.674269 GAGACTCTCGTCACCCTCGT 60.674 60.000 0.00 0.00 42.73 4.18
663 682 1.370587 GGAGACTCTCGTCACCCTCG 61.371 65.000 1.74 0.00 42.85 4.63
665 684 4.747218 GGAGACTCTCGTCACCCT 57.253 61.111 1.74 0.00 42.85 4.34
667 686 0.609681 ACTGGGAGACTCTCGTCACC 60.610 60.000 1.74 0.00 46.42 4.02
668 687 1.249407 AACTGGGAGACTCTCGTCAC 58.751 55.000 1.74 0.00 42.73 3.67
669 688 1.996798 AAACTGGGAGACTCTCGTCA 58.003 50.000 1.74 1.14 42.73 4.35
670 689 2.352912 GGAAAACTGGGAGACTCTCGTC 60.353 54.545 1.74 0.00 40.54 4.20
671 690 1.619332 GGAAAACTGGGAGACTCTCGT 59.381 52.381 1.74 0.00 0.00 4.18
672 691 1.896465 AGGAAAACTGGGAGACTCTCG 59.104 52.381 1.74 0.00 0.00 4.04
673 692 3.118920 GCTAGGAAAACTGGGAGACTCTC 60.119 52.174 1.74 0.00 0.00 3.20
674 693 2.835156 GCTAGGAAAACTGGGAGACTCT 59.165 50.000 1.74 0.00 0.00 3.24
675 694 2.835156 AGCTAGGAAAACTGGGAGACTC 59.165 50.000 0.00 0.00 0.00 3.36
676 695 2.909217 AGCTAGGAAAACTGGGAGACT 58.091 47.619 0.00 0.00 0.00 3.24
677 696 3.431068 GCTAGCTAGGAAAACTGGGAGAC 60.431 52.174 22.10 0.00 0.00 3.36
678 697 2.766828 GCTAGCTAGGAAAACTGGGAGA 59.233 50.000 22.10 0.00 0.00 3.71
679 698 2.769095 AGCTAGCTAGGAAAACTGGGAG 59.231 50.000 17.69 0.00 0.00 4.30
680 699 2.834113 AGCTAGCTAGGAAAACTGGGA 58.166 47.619 17.69 0.00 0.00 4.37
681 700 3.636153 AAGCTAGCTAGGAAAACTGGG 57.364 47.619 19.70 0.00 0.00 4.45
682 701 3.619038 CGAAAGCTAGCTAGGAAAACTGG 59.381 47.826 19.70 0.00 0.00 4.00
683 702 4.246458 ACGAAAGCTAGCTAGGAAAACTG 58.754 43.478 19.70 3.40 0.00 3.16
684 703 4.021368 TGACGAAAGCTAGCTAGGAAAACT 60.021 41.667 19.70 7.40 0.00 2.66
685 704 4.243270 TGACGAAAGCTAGCTAGGAAAAC 58.757 43.478 19.70 7.40 0.00 2.43
696 715 0.947180 GCGTGGGTTGACGAAAGCTA 60.947 55.000 0.00 0.00 42.10 3.32
772 803 4.399618 GCCTTGGTCCTATCTTTTTCTTCC 59.600 45.833 0.00 0.00 0.00 3.46
790 821 4.388469 CGTTTTGGAACCAAATATGCCTTG 59.612 41.667 17.86 1.70 44.14 3.61
791 822 4.562552 CCGTTTTGGAACCAAATATGCCTT 60.563 41.667 17.86 0.00 44.14 4.35
792 823 3.056179 CCGTTTTGGAACCAAATATGCCT 60.056 43.478 17.86 0.00 44.14 4.75
793 824 3.258228 CCGTTTTGGAACCAAATATGCC 58.742 45.455 17.86 5.52 44.14 4.40
794 825 3.258228 CCCGTTTTGGAACCAAATATGC 58.742 45.455 17.86 9.21 44.14 3.14
795 826 3.511934 TCCCCGTTTTGGAACCAAATATG 59.488 43.478 17.86 13.53 44.14 1.78
796 827 3.780626 TCCCCGTTTTGGAACCAAATAT 58.219 40.909 17.86 0.00 44.14 1.28
797 828 3.240310 TCCCCGTTTTGGAACCAAATA 57.760 42.857 17.86 8.04 44.14 1.40
823 854 2.166829 TGTGTTCTGTTTGTTGCACCT 58.833 42.857 0.00 0.00 0.00 4.00
825 856 2.923020 CCTTGTGTTCTGTTTGTTGCAC 59.077 45.455 0.00 0.00 0.00 4.57
827 858 3.438360 CTCCTTGTGTTCTGTTTGTTGC 58.562 45.455 0.00 0.00 0.00 4.17
837 868 1.376037 CGCTCCCCTCCTTGTGTTC 60.376 63.158 0.00 0.00 0.00 3.18
840 871 4.101448 CCCGCTCCCCTCCTTGTG 62.101 72.222 0.00 0.00 0.00 3.33
1225 1259 2.267006 CGTGCAGAGGCTGGTGAT 59.733 61.111 0.00 0.00 41.91 3.06
1665 1699 6.590292 AGAAGAAGAAGAAAAATGCATGCATG 59.410 34.615 32.79 22.70 36.68 4.06
1666 1700 6.698380 AGAAGAAGAAGAAAAATGCATGCAT 58.302 32.000 27.46 27.46 38.46 3.96
1667 1701 6.092955 AGAAGAAGAAGAAAAATGCATGCA 57.907 33.333 25.04 25.04 0.00 3.96
1668 1702 6.867293 AGAAGAAGAAGAAGAAAAATGCATGC 59.133 34.615 11.82 11.82 0.00 4.06
1669 1703 8.813643 AAGAAGAAGAAGAAGAAAAATGCATG 57.186 30.769 0.00 0.00 0.00 4.06
1683 1737 4.215185 GCTTGGACAGGAAAGAAGAAGAAG 59.785 45.833 0.00 0.00 0.00 2.85
1684 1738 4.137543 GCTTGGACAGGAAAGAAGAAGAA 58.862 43.478 0.00 0.00 0.00 2.52
1685 1739 3.136443 TGCTTGGACAGGAAAGAAGAAGA 59.864 43.478 0.00 0.00 0.00 2.87
1767 1823 0.178992 CTTGAACACCTCCCCTGCAA 60.179 55.000 0.00 0.00 0.00 4.08
1983 2047 3.528597 AGAAAATCCCAGTCTCGCTAC 57.471 47.619 0.00 0.00 0.00 3.58
1985 2049 2.616510 CCAAGAAAATCCCAGTCTCGCT 60.617 50.000 0.00 0.00 0.00 4.93
1986 2050 1.740025 CCAAGAAAATCCCAGTCTCGC 59.260 52.381 0.00 0.00 0.00 5.03
1987 2051 2.744202 CACCAAGAAAATCCCAGTCTCG 59.256 50.000 0.00 0.00 0.00 4.04
1988 2052 3.756117 ACACCAAGAAAATCCCAGTCTC 58.244 45.455 0.00 0.00 0.00 3.36
1989 2053 3.884037 ACACCAAGAAAATCCCAGTCT 57.116 42.857 0.00 0.00 0.00 3.24
1990 2054 3.255888 GGAACACCAAGAAAATCCCAGTC 59.744 47.826 0.00 0.00 0.00 3.51
1991 2055 3.230976 GGAACACCAAGAAAATCCCAGT 58.769 45.455 0.00 0.00 0.00 4.00
1992 2056 3.230134 TGGAACACCAAGAAAATCCCAG 58.770 45.455 0.00 0.00 0.00 4.45
1993 2057 3.117322 TCTGGAACACCAAGAAAATCCCA 60.117 43.478 0.00 0.00 32.95 4.37
1994 2058 3.496331 TCTGGAACACCAAGAAAATCCC 58.504 45.455 0.00 0.00 32.95 3.85
1995 2059 5.619981 CGATTCTGGAACACCAAGAAAATCC 60.620 44.000 0.00 0.00 32.95 3.01
1996 2060 5.393962 CGATTCTGGAACACCAAGAAAATC 58.606 41.667 0.00 0.00 32.95 2.17
2002 2066 2.350522 CTCCGATTCTGGAACACCAAG 58.649 52.381 0.00 0.00 37.64 3.61
2212 2276 7.988904 ATTCAGTACGTTAATAGAACTGCTC 57.011 36.000 7.37 0.00 37.94 4.26
2225 2289 5.986135 GCATAGGATCAGAATTCAGTACGTT 59.014 40.000 8.44 0.00 0.00 3.99
2446 2524 3.717707 TCCGTTCAGTTCACTTCAGAAG 58.282 45.455 8.77 8.77 0.00 2.85
2451 2529 3.040147 TGGATCCGTTCAGTTCACTTC 57.960 47.619 7.39 0.00 0.00 3.01
2453 2531 3.338249 CAATGGATCCGTTCAGTTCACT 58.662 45.455 16.68 0.00 0.00 3.41
2455 2533 2.083774 GCAATGGATCCGTTCAGTTCA 58.916 47.619 16.68 0.00 0.00 3.18
2456 2534 2.083774 TGCAATGGATCCGTTCAGTTC 58.916 47.619 16.68 4.70 0.00 3.01
2479 2557 0.870393 GCGATGACCTGCATACCATG 59.130 55.000 0.00 0.00 37.34 3.66
2707 2811 1.520787 CGCCGTTCCATGGACCTAC 60.521 63.158 15.91 9.63 0.00 3.18
2789 2897 2.158959 CGTCGCCGTGATGAACTCC 61.159 63.158 0.00 0.00 35.48 3.85
3097 3205 4.178540 GCATCCACCATCAACAAAGAATG 58.821 43.478 0.00 0.00 0.00 2.67
3098 3206 3.833650 TGCATCCACCATCAACAAAGAAT 59.166 39.130 0.00 0.00 0.00 2.40
3099 3207 3.229293 TGCATCCACCATCAACAAAGAA 58.771 40.909 0.00 0.00 0.00 2.52
3100 3208 2.874014 TGCATCCACCATCAACAAAGA 58.126 42.857 0.00 0.00 0.00 2.52
3175 3288 1.071385 GTAGTCGATCCTCCCGTCCTA 59.929 57.143 0.00 0.00 0.00 2.94
3357 3470 2.177531 CCCATCGTCGTCGTCGTT 59.822 61.111 11.41 0.87 38.33 3.85
3373 3492 3.496884 TCTGTGAAAAATGTACACGAGCC 59.503 43.478 0.00 0.00 37.35 4.70
3549 3687 3.688694 ACCGTGTACAAATTCAGGCTA 57.311 42.857 0.00 0.00 0.00 3.93
3565 3703 1.613437 CATTTCCAAGCCTGAAACCGT 59.387 47.619 0.00 0.00 34.77 4.83
3580 3718 8.656849 CACTCAAGTTACATACCTGTACATTTC 58.343 37.037 0.00 0.00 37.58 2.17
3587 3725 6.420913 AGTTCACTCAAGTTACATACCTGT 57.579 37.500 0.00 0.00 39.49 4.00
3609 3747 3.900116 CGCATCAAAAACACACTCGTTAG 59.100 43.478 0.00 0.00 0.00 2.34
3630 3768 1.935065 GAGTTTGCACGCGAGAGACG 61.935 60.000 15.93 0.00 45.66 4.18
3659 3801 6.904463 TGTACTACTTCATACTGTTCCACA 57.096 37.500 0.00 0.00 0.00 4.17
3676 3818 4.400251 CCACCTTACTCAACCGATGTACTA 59.600 45.833 0.00 0.00 0.00 1.82
3677 3819 3.194968 CCACCTTACTCAACCGATGTACT 59.805 47.826 0.00 0.00 0.00 2.73
3678 3820 3.518590 CCACCTTACTCAACCGATGTAC 58.481 50.000 0.00 0.00 0.00 2.90
3679 3821 2.498481 CCCACCTTACTCAACCGATGTA 59.502 50.000 0.00 0.00 0.00 2.29
3680 3822 1.278127 CCCACCTTACTCAACCGATGT 59.722 52.381 0.00 0.00 0.00 3.06
3681 3823 2.012051 GCCCACCTTACTCAACCGATG 61.012 57.143 0.00 0.00 0.00 3.84
3682 3824 0.252197 GCCCACCTTACTCAACCGAT 59.748 55.000 0.00 0.00 0.00 4.18
3683 3825 1.122632 TGCCCACCTTACTCAACCGA 61.123 55.000 0.00 0.00 0.00 4.69
3684 3826 0.035439 ATGCCCACCTTACTCAACCG 60.035 55.000 0.00 0.00 0.00 4.44
3685 3827 3.577805 ATATGCCCACCTTACTCAACC 57.422 47.619 0.00 0.00 0.00 3.77
3686 3828 5.914898 AAAATATGCCCACCTTACTCAAC 57.085 39.130 0.00 0.00 0.00 3.18
3687 3829 5.592688 GCTAAAATATGCCCACCTTACTCAA 59.407 40.000 0.00 0.00 0.00 3.02
3688 3830 5.130350 GCTAAAATATGCCCACCTTACTCA 58.870 41.667 0.00 0.00 0.00 3.41
3689 3831 4.519350 GGCTAAAATATGCCCACCTTACTC 59.481 45.833 0.00 0.00 43.11 2.59
3690 3832 4.470602 GGCTAAAATATGCCCACCTTACT 58.529 43.478 0.00 0.00 43.11 2.24
3691 3833 4.848562 GGCTAAAATATGCCCACCTTAC 57.151 45.455 0.00 0.00 43.11 2.34
3700 3842 7.973388 TGTGTACAAATTCAGGCTAAAATATGC 59.027 33.333 0.00 0.00 0.00 3.14
3701 3843 9.507280 CTGTGTACAAATTCAGGCTAAAATATG 57.493 33.333 0.00 0.00 0.00 1.78
3702 3844 9.243105 ACTGTGTACAAATTCAGGCTAAAATAT 57.757 29.630 13.84 0.00 32.92 1.28
3703 3845 8.630054 ACTGTGTACAAATTCAGGCTAAAATA 57.370 30.769 13.84 0.00 32.92 1.40
3704 3846 7.524717 ACTGTGTACAAATTCAGGCTAAAAT 57.475 32.000 13.84 0.00 32.92 1.82
3705 3847 6.952773 ACTGTGTACAAATTCAGGCTAAAA 57.047 33.333 13.84 0.00 32.92 1.52
3706 3848 6.952773 AACTGTGTACAAATTCAGGCTAAA 57.047 33.333 13.84 0.00 32.92 1.85
3707 3849 6.544197 TGAAACTGTGTACAAATTCAGGCTAA 59.456 34.615 13.84 0.00 31.30 3.09
3708 3850 6.058833 TGAAACTGTGTACAAATTCAGGCTA 58.941 36.000 13.84 0.00 31.30 3.93
3709 3851 4.887071 TGAAACTGTGTACAAATTCAGGCT 59.113 37.500 13.84 2.73 31.30 4.58
3710 3852 5.181690 TGAAACTGTGTACAAATTCAGGC 57.818 39.130 13.84 5.54 31.30 4.85
3712 3854 5.009010 AGCCTGAAACTGTGTACAAATTCAG 59.991 40.000 22.07 22.07 42.33 3.02
3713 3855 4.887071 AGCCTGAAACTGTGTACAAATTCA 59.113 37.500 0.00 5.52 32.86 2.57
3714 3856 5.438761 AGCCTGAAACTGTGTACAAATTC 57.561 39.130 0.00 0.85 0.00 2.17
3715 3857 5.359576 TCAAGCCTGAAACTGTGTACAAATT 59.640 36.000 0.00 0.00 0.00 1.82
3716 3858 4.887071 TCAAGCCTGAAACTGTGTACAAAT 59.113 37.500 0.00 0.00 0.00 2.32
3717 3859 4.265893 TCAAGCCTGAAACTGTGTACAAA 58.734 39.130 0.00 0.00 0.00 2.83
3718 3860 3.879998 TCAAGCCTGAAACTGTGTACAA 58.120 40.909 0.00 0.00 0.00 2.41
3719 3861 3.552132 TCAAGCCTGAAACTGTGTACA 57.448 42.857 0.00 0.00 0.00 2.90
3720 3862 4.893424 TTTCAAGCCTGAAACTGTGTAC 57.107 40.909 6.38 0.00 44.76 2.90
3729 3871 4.469657 ACCTGTACATTTTCAAGCCTGAA 58.530 39.130 0.00 0.00 39.87 3.02
3730 3872 4.098914 ACCTGTACATTTTCAAGCCTGA 57.901 40.909 0.00 0.00 0.00 3.86
3731 3873 5.415701 ACATACCTGTACATTTTCAAGCCTG 59.584 40.000 0.00 0.00 32.49 4.85
3732 3874 5.570320 ACATACCTGTACATTTTCAAGCCT 58.430 37.500 0.00 0.00 32.49 4.58
3733 3875 5.897377 ACATACCTGTACATTTTCAAGCC 57.103 39.130 0.00 0.00 32.49 4.35
3734 3876 8.040716 AGTTACATACCTGTACATTTTCAAGC 57.959 34.615 0.00 0.00 37.58 4.01
3735 3877 9.825972 CAAGTTACATACCTGTACATTTTCAAG 57.174 33.333 0.00 0.00 37.58 3.02
3736 3878 9.562408 TCAAGTTACATACCTGTACATTTTCAA 57.438 29.630 0.00 0.00 37.58 2.69
3737 3879 9.214957 CTCAAGTTACATACCTGTACATTTTCA 57.785 33.333 0.00 0.00 37.58 2.69
3738 3880 9.216117 ACTCAAGTTACATACCTGTACATTTTC 57.784 33.333 0.00 0.00 37.58 2.29
3742 3884 9.649167 GTTTACTCAAGTTACATACCTGTACAT 57.351 33.333 0.00 0.00 37.58 2.29
3743 3885 8.863086 AGTTTACTCAAGTTACATACCTGTACA 58.137 33.333 0.00 0.00 37.58 2.90
3746 3888 9.702494 GTTAGTTTACTCAAGTTACATACCTGT 57.298 33.333 0.00 0.00 39.49 4.00
3747 3889 8.857216 CGTTAGTTTACTCAAGTTACATACCTG 58.143 37.037 0.00 0.00 0.00 4.00
3748 3890 8.796475 TCGTTAGTTTACTCAAGTTACATACCT 58.204 33.333 0.00 0.00 0.00 3.08
3749 3891 8.970691 TCGTTAGTTTACTCAAGTTACATACC 57.029 34.615 0.00 0.00 0.00 2.73
3750 3892 9.617975 ACTCGTTAGTTTACTCAAGTTACATAC 57.382 33.333 0.00 0.00 29.00 2.39
3751 3893 9.616634 CACTCGTTAGTTTACTCAAGTTACATA 57.383 33.333 0.00 0.00 31.97 2.29
3752 3894 8.139989 ACACTCGTTAGTTTACTCAAGTTACAT 58.860 33.333 0.00 0.00 31.97 2.29
3753 3895 7.433131 CACACTCGTTAGTTTACTCAAGTTACA 59.567 37.037 0.00 0.00 31.97 2.41
3754 3896 7.433425 ACACACTCGTTAGTTTACTCAAGTTAC 59.567 37.037 0.00 0.00 31.97 2.50
3755 3897 7.483307 ACACACTCGTTAGTTTACTCAAGTTA 58.517 34.615 0.00 0.00 31.97 2.24
3756 3898 6.335777 ACACACTCGTTAGTTTACTCAAGTT 58.664 36.000 0.00 0.00 31.97 2.66
3757 3899 5.899299 ACACACTCGTTAGTTTACTCAAGT 58.101 37.500 0.00 0.00 31.97 3.16
3758 3900 6.823678 AACACACTCGTTAGTTTACTCAAG 57.176 37.500 0.00 0.00 31.97 3.02
3759 3901 7.599630 AAAACACACTCGTTAGTTTACTCAA 57.400 32.000 0.00 0.00 33.45 3.02
3760 3902 7.201548 GGAAAAACACACTCGTTAGTTTACTCA 60.202 37.037 0.00 0.00 33.45 3.41
3761 3903 7.010830 AGGAAAAACACACTCGTTAGTTTACTC 59.989 37.037 0.00 0.00 33.45 2.59
3762 3904 6.820152 AGGAAAAACACACTCGTTAGTTTACT 59.180 34.615 0.00 0.00 33.45 2.24
3763 3905 6.903479 CAGGAAAAACACACTCGTTAGTTTAC 59.097 38.462 0.00 0.00 33.45 2.01
3764 3906 6.594937 ACAGGAAAAACACACTCGTTAGTTTA 59.405 34.615 0.00 0.00 33.45 2.01
3765 3907 5.413523 ACAGGAAAAACACACTCGTTAGTTT 59.586 36.000 0.00 0.00 35.87 2.66
3766 3908 4.939439 ACAGGAAAAACACACTCGTTAGTT 59.061 37.500 0.00 0.00 31.97 2.24
3767 3909 4.510571 ACAGGAAAAACACACTCGTTAGT 58.489 39.130 0.00 0.00 35.91 2.24
3768 3910 5.479716 AACAGGAAAAACACACTCGTTAG 57.520 39.130 0.00 0.00 0.00 2.34
3769 3911 5.644636 AGAAACAGGAAAAACACACTCGTTA 59.355 36.000 0.00 0.00 0.00 3.18
3770 3912 4.457949 AGAAACAGGAAAAACACACTCGTT 59.542 37.500 0.00 0.00 0.00 3.85
3771 3913 4.007659 AGAAACAGGAAAAACACACTCGT 58.992 39.130 0.00 0.00 0.00 4.18
3772 3914 4.332819 AGAGAAACAGGAAAAACACACTCG 59.667 41.667 0.00 0.00 0.00 4.18
3773 3915 5.819825 AGAGAAACAGGAAAAACACACTC 57.180 39.130 0.00 0.00 0.00 3.51
3774 3916 5.125578 GGAAGAGAAACAGGAAAAACACACT 59.874 40.000 0.00 0.00 0.00 3.55
3775 3917 5.105917 TGGAAGAGAAACAGGAAAAACACAC 60.106 40.000 0.00 0.00 0.00 3.82
3776 3918 5.013547 TGGAAGAGAAACAGGAAAAACACA 58.986 37.500 0.00 0.00 0.00 3.72
3777 3919 5.576447 TGGAAGAGAAACAGGAAAAACAC 57.424 39.130 0.00 0.00 0.00 3.32
3778 3920 6.210584 AGTTTGGAAGAGAAACAGGAAAAACA 59.789 34.615 0.00 0.00 36.03 2.83
3779 3921 6.631016 AGTTTGGAAGAGAAACAGGAAAAAC 58.369 36.000 0.00 0.00 36.03 2.43
3780 3922 6.663523 AGAGTTTGGAAGAGAAACAGGAAAAA 59.336 34.615 0.00 0.00 36.03 1.94
3781 3923 6.187682 AGAGTTTGGAAGAGAAACAGGAAAA 58.812 36.000 0.00 0.00 36.03 2.29
3782 3924 5.755849 AGAGTTTGGAAGAGAAACAGGAAA 58.244 37.500 0.00 0.00 36.03 3.13
3783 3925 5.131142 AGAGAGTTTGGAAGAGAAACAGGAA 59.869 40.000 0.00 0.00 36.03 3.36
3784 3926 4.656112 AGAGAGTTTGGAAGAGAAACAGGA 59.344 41.667 0.00 0.00 36.03 3.86
3785 3927 4.967036 AGAGAGTTTGGAAGAGAAACAGG 58.033 43.478 0.00 0.00 36.03 4.00
3786 3928 7.360776 GCAATAGAGAGTTTGGAAGAGAAACAG 60.361 40.741 0.00 0.00 36.03 3.16
3787 3929 6.428159 GCAATAGAGAGTTTGGAAGAGAAACA 59.572 38.462 0.00 0.00 36.03 2.83
3788 3930 6.652900 AGCAATAGAGAGTTTGGAAGAGAAAC 59.347 38.462 0.00 0.00 34.15 2.78
3789 3931 6.773638 AGCAATAGAGAGTTTGGAAGAGAAA 58.226 36.000 0.00 0.00 0.00 2.52
3790 3932 6.365970 AGCAATAGAGAGTTTGGAAGAGAA 57.634 37.500 0.00 0.00 0.00 2.87
3791 3933 6.365970 AAGCAATAGAGAGTTTGGAAGAGA 57.634 37.500 0.00 0.00 0.00 3.10
3792 3934 6.429385 ACAAAGCAATAGAGAGTTTGGAAGAG 59.571 38.462 0.00 0.00 33.33 2.85
3793 3935 6.205464 CACAAAGCAATAGAGAGTTTGGAAGA 59.795 38.462 0.00 0.00 33.33 2.87
3794 3936 6.376978 CACAAAGCAATAGAGAGTTTGGAAG 58.623 40.000 0.00 0.00 33.33 3.46
3795 3937 5.241506 CCACAAAGCAATAGAGAGTTTGGAA 59.758 40.000 0.00 0.00 33.33 3.53
3796 3938 4.761739 CCACAAAGCAATAGAGAGTTTGGA 59.238 41.667 0.00 0.00 33.33 3.53
3797 3939 4.761739 TCCACAAAGCAATAGAGAGTTTGG 59.238 41.667 0.00 0.00 33.33 3.28
3798 3940 5.947228 TCCACAAAGCAATAGAGAGTTTG 57.053 39.130 0.00 0.00 34.85 2.93
3799 3941 5.049405 CGTTCCACAAAGCAATAGAGAGTTT 60.049 40.000 0.00 0.00 0.00 2.66
3800 3942 4.452455 CGTTCCACAAAGCAATAGAGAGTT 59.548 41.667 0.00 0.00 0.00 3.01
3801 3943 3.997021 CGTTCCACAAAGCAATAGAGAGT 59.003 43.478 0.00 0.00 0.00 3.24
3802 3944 3.372206 CCGTTCCACAAAGCAATAGAGAG 59.628 47.826 0.00 0.00 0.00 3.20
3803 3945 3.244422 ACCGTTCCACAAAGCAATAGAGA 60.244 43.478 0.00 0.00 0.00 3.10
3804 3946 3.074412 ACCGTTCCACAAAGCAATAGAG 58.926 45.455 0.00 0.00 0.00 2.43
3805 3947 3.071479 GACCGTTCCACAAAGCAATAGA 58.929 45.455 0.00 0.00 0.00 1.98
3806 3948 3.074412 AGACCGTTCCACAAAGCAATAG 58.926 45.455 0.00 0.00 0.00 1.73
3807 3949 2.811431 CAGACCGTTCCACAAAGCAATA 59.189 45.455 0.00 0.00 0.00 1.90
3808 3950 1.608590 CAGACCGTTCCACAAAGCAAT 59.391 47.619 0.00 0.00 0.00 3.56
3809 3951 1.021202 CAGACCGTTCCACAAAGCAA 58.979 50.000 0.00 0.00 0.00 3.91
3810 3952 0.179234 TCAGACCGTTCCACAAAGCA 59.821 50.000 0.00 0.00 0.00 3.91
3811 3953 1.264288 CTTCAGACCGTTCCACAAAGC 59.736 52.381 0.00 0.00 0.00 3.51
3812 3954 2.561569 ACTTCAGACCGTTCCACAAAG 58.438 47.619 0.00 0.00 0.00 2.77
3813 3955 2.702592 ACTTCAGACCGTTCCACAAA 57.297 45.000 0.00 0.00 0.00 2.83
3814 3956 2.431419 TGTACTTCAGACCGTTCCACAA 59.569 45.455 0.00 0.00 0.00 3.33
3815 3957 2.033372 TGTACTTCAGACCGTTCCACA 58.967 47.619 0.00 0.00 0.00 4.17
3816 3958 2.798847 GTTGTACTTCAGACCGTTCCAC 59.201 50.000 0.00 0.00 0.00 4.02
3817 3959 2.696707 AGTTGTACTTCAGACCGTTCCA 59.303 45.455 0.00 0.00 0.00 3.53
3818 3960 3.057734 CAGTTGTACTTCAGACCGTTCC 58.942 50.000 0.00 0.00 0.00 3.62
3819 3961 3.714391 ACAGTTGTACTTCAGACCGTTC 58.286 45.455 0.00 0.00 0.00 3.95
3820 3962 3.814005 ACAGTTGTACTTCAGACCGTT 57.186 42.857 0.00 0.00 0.00 4.44
3821 3963 4.234530 GTACAGTTGTACTTCAGACCGT 57.765 45.455 13.72 0.00 45.47 4.83
3870 4012 7.548075 CCATTGCTTCTGATTCTGCTTTTATTT 59.452 33.333 0.00 0.00 0.00 1.40
3872 4014 6.570692 CCATTGCTTCTGATTCTGCTTTTAT 58.429 36.000 0.00 0.00 0.00 1.40
3873 4015 5.622914 GCCATTGCTTCTGATTCTGCTTTTA 60.623 40.000 0.00 0.00 33.53 1.52
3874 4016 4.817517 CCATTGCTTCTGATTCTGCTTTT 58.182 39.130 0.00 0.00 0.00 2.27
3877 4019 1.749634 GCCATTGCTTCTGATTCTGCT 59.250 47.619 0.00 0.00 33.53 4.24
3887 4029 1.670967 GCTTGTTCAGGCCATTGCTTC 60.671 52.381 5.01 0.00 37.74 3.86
3890 4032 0.108945 GAGCTTGTTCAGGCCATTGC 60.109 55.000 5.01 0.00 0.00 3.56
3904 4046 2.776536 AGGTATCCATTGAGCAGAGCTT 59.223 45.455 0.00 0.00 39.88 3.74
3920 4062 0.690411 AGCAGAGCAGCTGGAGGTAT 60.690 55.000 17.12 0.00 44.66 2.73
3921 4063 0.033109 TAGCAGAGCAGCTGGAGGTA 60.033 55.000 17.12 0.00 46.11 3.08
3922 4064 0.690411 ATAGCAGAGCAGCTGGAGGT 60.690 55.000 17.12 0.00 46.11 3.85
3923 4065 0.469070 AATAGCAGAGCAGCTGGAGG 59.531 55.000 17.12 0.00 46.11 4.30
3924 4066 1.413445 AGAATAGCAGAGCAGCTGGAG 59.587 52.381 17.12 0.00 46.11 3.86
3925 4067 1.138464 CAGAATAGCAGAGCAGCTGGA 59.862 52.381 17.12 0.00 46.11 3.86
3929 4071 1.497223 CCGCAGAATAGCAGAGCAGC 61.497 60.000 0.00 0.00 0.00 5.25
3950 4097 2.910737 CCCCAAGCAGCCTTGAGGA 61.911 63.158 0.06 0.00 46.67 3.71
3954 4101 2.362120 CCTCCCCAAGCAGCCTTG 60.362 66.667 0.00 0.00 46.38 3.61
3955 4102 3.665971 CCCTCCCCAAGCAGCCTT 61.666 66.667 0.00 0.00 0.00 4.35
3963 4110 2.531685 CAGGTGTCCCCTCCCCAA 60.532 66.667 0.00 0.00 43.86 4.12
3982 4129 3.683847 GCTCCATCTTTGTGATAGGCAGT 60.684 47.826 0.00 0.00 33.36 4.40
4000 4147 2.363147 AGTCTCGGGTGGAGCTCC 60.363 66.667 26.78 26.78 42.82 4.70
4010 4157 2.502492 ATGGGATGGCGAGTCTCGG 61.502 63.158 23.09 5.92 40.84 4.63
4031 4180 4.021719 CACTCCAGCATGTCCAATTCTTTT 60.022 41.667 0.00 0.00 0.00 2.27
4103 4252 1.310216 GCCATCGTACACCCCAAACC 61.310 60.000 0.00 0.00 0.00 3.27
4104 4253 1.310216 GGCCATCGTACACCCCAAAC 61.310 60.000 0.00 0.00 0.00 2.93
4105 4254 1.001887 GGCCATCGTACACCCCAAA 60.002 57.895 0.00 0.00 0.00 3.28
4106 4255 1.567208 ATGGCCATCGTACACCCCAA 61.567 55.000 14.09 0.00 0.00 4.12
4107 4256 1.567208 AATGGCCATCGTACACCCCA 61.567 55.000 21.08 0.00 0.00 4.96
4108 4257 0.395173 AAATGGCCATCGTACACCCC 60.395 55.000 21.08 0.00 0.00 4.95
4109 4258 1.470051 AAAATGGCCATCGTACACCC 58.530 50.000 21.08 0.00 0.00 4.61
4110 4259 3.004315 CCATAAAATGGCCATCGTACACC 59.996 47.826 21.08 0.00 44.70 4.16
4111 4260 4.223320 CCATAAAATGGCCATCGTACAC 57.777 45.455 21.08 0.00 44.70 2.90
4123 4272 8.252417 TCTTGATGAATGACAACCCATAAAATG 58.748 33.333 0.00 0.00 0.00 2.32
4124 4273 8.365060 TCTTGATGAATGACAACCCATAAAAT 57.635 30.769 0.00 0.00 0.00 1.82
4125 4274 7.669304 TCTCTTGATGAATGACAACCCATAAAA 59.331 33.333 0.00 0.00 0.00 1.52
4126 4275 7.174413 TCTCTTGATGAATGACAACCCATAAA 58.826 34.615 0.00 0.00 0.00 1.40
4127 4276 6.720309 TCTCTTGATGAATGACAACCCATAA 58.280 36.000 0.00 0.00 0.00 1.90
4128 4277 6.312141 TCTCTTGATGAATGACAACCCATA 57.688 37.500 0.00 0.00 0.00 2.74
4129 4278 5.183530 TCTCTTGATGAATGACAACCCAT 57.816 39.130 0.00 0.00 0.00 4.00
4130 4279 4.639078 TCTCTTGATGAATGACAACCCA 57.361 40.909 0.00 0.00 0.00 4.51
4131 4280 5.964958 TTTCTCTTGATGAATGACAACCC 57.035 39.130 0.00 0.00 0.00 4.11
4132 4281 6.385033 CCTTTTCTCTTGATGAATGACAACC 58.615 40.000 0.00 0.00 0.00 3.77
4133 4282 5.860716 GCCTTTTCTCTTGATGAATGACAAC 59.139 40.000 0.00 0.00 0.00 3.32
4134 4283 5.535783 TGCCTTTTCTCTTGATGAATGACAA 59.464 36.000 0.00 0.00 0.00 3.18
4135 4284 5.048504 GTGCCTTTTCTCTTGATGAATGACA 60.049 40.000 0.00 0.00 0.00 3.58
4136 4285 5.048504 TGTGCCTTTTCTCTTGATGAATGAC 60.049 40.000 0.00 0.00 0.00 3.06
4137 4286 5.072055 TGTGCCTTTTCTCTTGATGAATGA 58.928 37.500 0.00 0.00 0.00 2.57
4138 4287 5.381174 TGTGCCTTTTCTCTTGATGAATG 57.619 39.130 0.00 0.00 0.00 2.67
4139 4288 5.105473 CCATGTGCCTTTTCTCTTGATGAAT 60.105 40.000 0.00 0.00 0.00 2.57
4140 4289 4.219070 CCATGTGCCTTTTCTCTTGATGAA 59.781 41.667 0.00 0.00 0.00 2.57
4141 4290 3.760151 CCATGTGCCTTTTCTCTTGATGA 59.240 43.478 0.00 0.00 0.00 2.92
4142 4291 3.760151 TCCATGTGCCTTTTCTCTTGATG 59.240 43.478 0.00 0.00 0.00 3.07
4143 4292 4.038271 TCCATGTGCCTTTTCTCTTGAT 57.962 40.909 0.00 0.00 0.00 2.57
4144 4293 3.507162 TCCATGTGCCTTTTCTCTTGA 57.493 42.857 0.00 0.00 0.00 3.02
4145 4294 4.796038 AATCCATGTGCCTTTTCTCTTG 57.204 40.909 0.00 0.00 0.00 3.02
4146 4295 5.813513 AAAATCCATGTGCCTTTTCTCTT 57.186 34.783 0.00 0.00 0.00 2.85
4147 4296 5.813513 AAAAATCCATGTGCCTTTTCTCT 57.186 34.783 0.00 0.00 0.00 3.10
4171 4320 1.871039 CTCGAGCCTTCGTTCCAAAAA 59.129 47.619 0.00 0.00 46.72 1.94
4172 4321 1.069513 TCTCGAGCCTTCGTTCCAAAA 59.930 47.619 7.81 0.00 46.72 2.44
4173 4322 0.677288 TCTCGAGCCTTCGTTCCAAA 59.323 50.000 7.81 0.00 46.72 3.28
4174 4323 0.677288 TTCTCGAGCCTTCGTTCCAA 59.323 50.000 7.81 0.00 46.72 3.53
4175 4324 0.677288 TTTCTCGAGCCTTCGTTCCA 59.323 50.000 7.81 0.00 46.72 3.53
4176 4325 1.351153 CTTTCTCGAGCCTTCGTTCC 58.649 55.000 7.81 0.00 46.72 3.62
4177 4326 1.351153 CCTTTCTCGAGCCTTCGTTC 58.649 55.000 7.81 0.00 46.72 3.95
4178 4327 0.037232 CCCTTTCTCGAGCCTTCGTT 60.037 55.000 7.81 0.00 46.72 3.85
4179 4328 1.592223 CCCTTTCTCGAGCCTTCGT 59.408 57.895 7.81 0.00 46.72 3.85
4181 4330 1.450491 GGCCCTTTCTCGAGCCTTC 60.450 63.158 7.81 0.00 42.34 3.46
4182 4331 2.671682 GGCCCTTTCTCGAGCCTT 59.328 61.111 7.81 0.00 42.34 4.35
4183 4332 3.403558 GGGCCCTTTCTCGAGCCT 61.404 66.667 17.04 0.00 45.07 4.58
4184 4333 4.840005 CGGGCCCTTTCTCGAGCC 62.840 72.222 22.43 4.89 44.99 4.70
4185 4334 3.771160 TCGGGCCCTTTCTCGAGC 61.771 66.667 22.43 0.00 0.00 5.03
4186 4335 1.889530 AAGTCGGGCCCTTTCTCGAG 61.890 60.000 22.43 5.93 32.09 4.04
4187 4336 1.477685 AAAGTCGGGCCCTTTCTCGA 61.478 55.000 22.43 7.96 0.00 4.04
4188 4337 1.003718 AAAGTCGGGCCCTTTCTCG 60.004 57.895 22.43 5.17 0.00 4.04
4189 4338 0.036306 TCAAAGTCGGGCCCTTTCTC 59.964 55.000 22.43 5.32 29.89 2.87
4190 4339 0.476771 TTCAAAGTCGGGCCCTTTCT 59.523 50.000 22.43 12.29 29.89 2.52
4191 4340 1.545841 ATTCAAAGTCGGGCCCTTTC 58.454 50.000 22.43 9.97 29.89 2.62
4192 4341 2.009681 AATTCAAAGTCGGGCCCTTT 57.990 45.000 22.43 11.29 32.48 3.11
4193 4342 2.823747 GTTAATTCAAAGTCGGGCCCTT 59.176 45.455 22.43 4.16 0.00 3.95
4194 4343 2.224917 TGTTAATTCAAAGTCGGGCCCT 60.225 45.455 22.43 0.00 0.00 5.19
4195 4344 2.164338 TGTTAATTCAAAGTCGGGCCC 58.836 47.619 13.57 13.57 0.00 5.80
4196 4345 3.926821 TTGTTAATTCAAAGTCGGGCC 57.073 42.857 0.00 0.00 0.00 5.80
4204 4353 5.694006 CGGTTGATGGCTTTGTTAATTCAAA 59.306 36.000 0.00 0.00 36.18 2.69
4205 4354 5.226396 CGGTTGATGGCTTTGTTAATTCAA 58.774 37.500 0.00 0.00 0.00 2.69
4206 4355 4.321601 CCGGTTGATGGCTTTGTTAATTCA 60.322 41.667 0.00 0.00 0.00 2.57
4207 4356 4.173256 CCGGTTGATGGCTTTGTTAATTC 58.827 43.478 0.00 0.00 0.00 2.17
4208 4357 4.186856 CCGGTTGATGGCTTTGTTAATT 57.813 40.909 0.00 0.00 0.00 1.40
4209 4358 3.866883 CCGGTTGATGGCTTTGTTAAT 57.133 42.857 0.00 0.00 0.00 1.40
4219 4368 0.182537 TAATCCTGGCCGGTTGATGG 59.817 55.000 11.58 0.00 0.00 3.51
4220 4369 1.308998 GTAATCCTGGCCGGTTGATG 58.691 55.000 11.58 0.00 0.00 3.07
4221 4370 0.916086 TGTAATCCTGGCCGGTTGAT 59.084 50.000 11.58 4.00 0.00 2.57
4222 4371 0.035820 GTGTAATCCTGGCCGGTTGA 60.036 55.000 11.58 1.27 0.00 3.18
4223 4372 0.322098 TGTGTAATCCTGGCCGGTTG 60.322 55.000 11.58 0.00 0.00 3.77
4224 4373 0.402504 TTGTGTAATCCTGGCCGGTT 59.597 50.000 11.58 1.23 0.00 4.44
4225 4374 0.035439 CTTGTGTAATCCTGGCCGGT 60.035 55.000 11.58 0.00 0.00 5.28
4226 4375 0.748005 CCTTGTGTAATCCTGGCCGG 60.748 60.000 3.88 3.88 0.00 6.13
4227 4376 1.376609 GCCTTGTGTAATCCTGGCCG 61.377 60.000 0.00 0.00 34.81 6.13
4228 4377 2.493547 GCCTTGTGTAATCCTGGCC 58.506 57.895 0.00 0.00 34.81 5.36
4229 4378 0.323360 TGGCCTTGTGTAATCCTGGC 60.323 55.000 3.32 0.00 39.61 4.85
4230 4379 1.463674 GTGGCCTTGTGTAATCCTGG 58.536 55.000 3.32 0.00 0.00 4.45
4231 4380 1.271871 TGGTGGCCTTGTGTAATCCTG 60.272 52.381 3.32 0.00 0.00 3.86
4232 4381 1.072266 TGGTGGCCTTGTGTAATCCT 58.928 50.000 3.32 0.00 0.00 3.24
4233 4382 1.818674 CTTGGTGGCCTTGTGTAATCC 59.181 52.381 3.32 0.00 0.00 3.01
4234 4383 1.202348 GCTTGGTGGCCTTGTGTAATC 59.798 52.381 3.32 0.00 0.00 1.75
4235 4384 1.256812 GCTTGGTGGCCTTGTGTAAT 58.743 50.000 3.32 0.00 0.00 1.89
4236 4385 0.106469 TGCTTGGTGGCCTTGTGTAA 60.106 50.000 3.32 0.00 0.00 2.41
4237 4386 0.112218 ATGCTTGGTGGCCTTGTGTA 59.888 50.000 3.32 0.00 0.00 2.90
4238 4387 1.152483 ATGCTTGGTGGCCTTGTGT 60.152 52.632 3.32 0.00 0.00 3.72
4239 4388 1.180456 TCATGCTTGGTGGCCTTGTG 61.180 55.000 3.32 0.00 0.00 3.33
4240 4389 0.896940 CTCATGCTTGGTGGCCTTGT 60.897 55.000 3.32 0.00 0.00 3.16
4241 4390 1.888018 CTCATGCTTGGTGGCCTTG 59.112 57.895 3.32 0.00 0.00 3.61
4242 4391 1.980772 GCTCATGCTTGGTGGCCTT 60.981 57.895 3.32 0.00 36.03 4.35
4243 4392 2.362120 GCTCATGCTTGGTGGCCT 60.362 61.111 3.32 0.00 36.03 5.19
4244 4393 3.818787 CGCTCATGCTTGGTGGCC 61.819 66.667 0.00 0.00 36.97 5.36
4245 4394 2.747460 TCGCTCATGCTTGGTGGC 60.747 61.111 0.00 2.16 36.97 5.01
4246 4395 2.401766 GGTCGCTCATGCTTGGTGG 61.402 63.158 0.00 0.00 36.97 4.61
4247 4396 2.743752 CGGTCGCTCATGCTTGGTG 61.744 63.158 0.00 0.00 36.97 4.17
4248 4397 2.434884 CGGTCGCTCATGCTTGGT 60.435 61.111 0.00 0.00 36.97 3.67
4249 4398 1.298157 TTTCGGTCGCTCATGCTTGG 61.298 55.000 0.00 0.00 36.97 3.61
4250 4399 0.095935 CTTTCGGTCGCTCATGCTTG 59.904 55.000 0.00 0.00 36.97 4.01
4251 4400 0.037326 TCTTTCGGTCGCTCATGCTT 60.037 50.000 0.00 0.00 36.97 3.91
4252 4401 0.176680 ATCTTTCGGTCGCTCATGCT 59.823 50.000 0.00 0.00 36.97 3.79
4253 4402 1.523095 GTATCTTTCGGTCGCTCATGC 59.477 52.381 0.00 0.00 0.00 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.