Multiple sequence alignment - TraesCS3B01G360100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G360100 | chr3B | 100.000 | 2807 | 0 | 0 | 1 | 2807 | 571883952 | 571886758 | 0.000000e+00 | 5184.0 |
1 | TraesCS3B01G360100 | chr3A | 90.159 | 1443 | 93 | 17 | 550 | 1973 | 574913578 | 574914990 | 0.000000e+00 | 1832.0 |
2 | TraesCS3B01G360100 | chr3A | 85.745 | 463 | 38 | 10 | 2235 | 2692 | 574915115 | 574915554 | 5.480000e-127 | 464.0 |
3 | TraesCS3B01G360100 | chr3A | 85.714 | 308 | 40 | 3 | 89 | 396 | 574912909 | 574913212 | 3.490000e-84 | 322.0 |
4 | TraesCS3B01G360100 | chr3A | 87.821 | 156 | 18 | 1 | 1815 | 1970 | 574928350 | 574928504 | 6.180000e-42 | 182.0 |
5 | TraesCS3B01G360100 | chr3A | 93.651 | 63 | 4 | 0 | 1 | 63 | 574912848 | 574912910 | 8.280000e-16 | 95.3 |
6 | TraesCS3B01G360100 | chr3D | 92.331 | 1304 | 74 | 8 | 581 | 1860 | 436176054 | 436177355 | 0.000000e+00 | 1831.0 |
7 | TraesCS3B01G360100 | chr3D | 91.466 | 539 | 36 | 5 | 2270 | 2807 | 436179543 | 436180072 | 0.000000e+00 | 732.0 |
8 | TraesCS3B01G360100 | chr3D | 88.321 | 137 | 13 | 3 | 1834 | 1970 | 436214012 | 436214145 | 8.050000e-36 | 161.0 |
9 | TraesCS3B01G360100 | chr3D | 94.737 | 95 | 4 | 1 | 1888 | 1981 | 436179290 | 436179384 | 2.250000e-31 | 147.0 |
10 | TraesCS3B01G360100 | chr3D | 91.667 | 48 | 4 | 0 | 1852 | 1899 | 436177760 | 436177807 | 1.800000e-07 | 67.6 |
11 | TraesCS3B01G360100 | chr7B | 87.500 | 48 | 6 | 0 | 2175 | 2222 | 568427368 | 568427415 | 3.910000e-04 | 56.5 |
12 | TraesCS3B01G360100 | chr1B | 100.000 | 28 | 0 | 0 | 2175 | 2202 | 645548449 | 645548476 | 5.000000e-03 | 52.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G360100 | chr3B | 571883952 | 571886758 | 2806 | False | 5184.000 | 5184 | 100.00000 | 1 | 2807 | 1 | chr3B.!!$F1 | 2806 |
1 | TraesCS3B01G360100 | chr3A | 574912848 | 574915554 | 2706 | False | 678.325 | 1832 | 88.81725 | 1 | 2692 | 4 | chr3A.!!$F2 | 2691 |
2 | TraesCS3B01G360100 | chr3D | 436176054 | 436180072 | 4018 | False | 694.400 | 1831 | 92.55025 | 581 | 2807 | 4 | chr3D.!!$F2 | 2226 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
925 | 1241 | 0.172803 | GCCCCGATCGATATAAGCGT | 59.827 | 55.0 | 18.66 | 0.0 | 0.0 | 5.07 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1818 | 2141 | 0.109226 | ACGAAGTACTCTTCCGCAGC | 60.109 | 55.0 | 0.0 | 0.0 | 45.02 | 5.25 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
63 | 64 | 1.254975 | TTCGAGACCCTGCGGATCAA | 61.255 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
64 | 65 | 1.519455 | CGAGACCCTGCGGATCAAC | 60.519 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
65 | 66 | 1.596934 | GAGACCCTGCGGATCAACA | 59.403 | 57.895 | 0.00 | 0.00 | 0.00 | 3.33 |
66 | 67 | 0.179000 | GAGACCCTGCGGATCAACAT | 59.821 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
67 | 68 | 0.179000 | AGACCCTGCGGATCAACATC | 59.821 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
68 | 69 | 0.815615 | GACCCTGCGGATCAACATCC | 60.816 | 60.000 | 0.00 | 0.00 | 45.04 | 3.51 |
79 | 80 | 4.348863 | GATCAACATCCAGGCATCTACT | 57.651 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
80 | 81 | 3.827008 | TCAACATCCAGGCATCTACTC | 57.173 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
81 | 82 | 3.106827 | TCAACATCCAGGCATCTACTCA | 58.893 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
82 | 83 | 3.519107 | TCAACATCCAGGCATCTACTCAA | 59.481 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
83 | 84 | 4.019411 | TCAACATCCAGGCATCTACTCAAA | 60.019 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
84 | 85 | 3.878778 | ACATCCAGGCATCTACTCAAAC | 58.121 | 45.455 | 0.00 | 0.00 | 0.00 | 2.93 |
85 | 86 | 2.672961 | TCCAGGCATCTACTCAAACG | 57.327 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
86 | 87 | 1.009829 | CCAGGCATCTACTCAAACGC | 58.990 | 55.000 | 0.00 | 0.00 | 0.00 | 4.84 |
87 | 88 | 1.675714 | CCAGGCATCTACTCAAACGCA | 60.676 | 52.381 | 0.00 | 0.00 | 0.00 | 5.24 |
88 | 89 | 1.394917 | CAGGCATCTACTCAAACGCAC | 59.605 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
89 | 90 | 1.001974 | AGGCATCTACTCAAACGCACA | 59.998 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
94 | 95 | 4.641954 | CATCTACTCAAACGCACATGTTC | 58.358 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
96 | 97 | 3.740832 | TCTACTCAAACGCACATGTTCAG | 59.259 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
107 | 108 | 3.415212 | CACATGTTCAGAGATTGGTGGT | 58.585 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
112 | 113 | 3.882888 | TGTTCAGAGATTGGTGGTTTGAC | 59.117 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
120 | 121 | 4.823989 | AGATTGGTGGTTTGACAAGAGAAG | 59.176 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
123 | 124 | 4.199310 | TGGTGGTTTGACAAGAGAAGAAG | 58.801 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
124 | 125 | 4.200092 | GGTGGTTTGACAAGAGAAGAAGT | 58.800 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
131 | 132 | 4.119862 | TGACAAGAGAAGAAGTTTCACCG | 58.880 | 43.478 | 0.00 | 0.00 | 0.00 | 4.94 |
143 | 144 | 2.298163 | AGTTTCACCGGACGTATCAAGT | 59.702 | 45.455 | 9.46 | 0.00 | 0.00 | 3.16 |
156 | 157 | 3.791887 | CGTATCAAGTGTGGATTCGACTC | 59.208 | 47.826 | 0.43 | 0.00 | 37.63 | 3.36 |
167 | 168 | 4.624024 | GTGGATTCGACTCGTTTGTGATTA | 59.376 | 41.667 | 0.00 | 0.00 | 0.00 | 1.75 |
178 | 179 | 3.723835 | CGTTTGTGATTAGTACCGCTTGC | 60.724 | 47.826 | 0.00 | 0.00 | 0.00 | 4.01 |
201 | 202 | 1.815003 | GTTGTGGAAGCAGAGGAATGG | 59.185 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
202 | 203 | 1.067295 | TGTGGAAGCAGAGGAATGGT | 58.933 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
206 | 207 | 2.119495 | GGAAGCAGAGGAATGGTAGGA | 58.881 | 52.381 | 0.00 | 0.00 | 0.00 | 2.94 |
211 | 212 | 3.525199 | AGCAGAGGAATGGTAGGATGTTT | 59.475 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
214 | 215 | 6.064717 | GCAGAGGAATGGTAGGATGTTTAAT | 58.935 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
218 | 219 | 8.875168 | AGAGGAATGGTAGGATGTTTAATAGAG | 58.125 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
224 | 225 | 9.784531 | ATGGTAGGATGTTTAATAGAGTTCATG | 57.215 | 33.333 | 0.00 | 0.00 | 0.00 | 3.07 |
238 | 239 | 5.271598 | AGAGTTCATGAGAAGAGATCACCT | 58.728 | 41.667 | 0.00 | 0.00 | 33.63 | 4.00 |
268 | 269 | 2.158623 | TGTTGAGCAGGTGTTTCTGGAT | 60.159 | 45.455 | 0.00 | 0.00 | 35.43 | 3.41 |
271 | 272 | 2.158623 | TGAGCAGGTGTTTCTGGATGTT | 60.159 | 45.455 | 0.00 | 0.00 | 35.43 | 2.71 |
272 | 273 | 2.887152 | GAGCAGGTGTTTCTGGATGTTT | 59.113 | 45.455 | 0.00 | 0.00 | 35.43 | 2.83 |
280 | 281 | 2.558359 | GTTTCTGGATGTTTGGGACTGG | 59.442 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
282 | 283 | 1.630369 | TCTGGATGTTTGGGACTGGAG | 59.370 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
286 | 287 | 0.779997 | ATGTTTGGGACTGGAGGCTT | 59.220 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
303 | 304 | 1.673033 | GCTTGCTGGCTTCGAAGTAGA | 60.673 | 52.381 | 25.24 | 9.46 | 0.00 | 2.59 |
314 | 315 | 6.098409 | TGGCTTCGAAGTAGAAGGATTAGATT | 59.902 | 38.462 | 25.24 | 0.00 | 45.65 | 2.40 |
327 | 328 | 7.340743 | AGAAGGATTAGATTCTTTCGTGAGAGA | 59.659 | 37.037 | 0.00 | 0.00 | 43.69 | 3.10 |
329 | 330 | 6.605594 | AGGATTAGATTCTTTCGTGAGAGAGT | 59.394 | 38.462 | 0.00 | 0.00 | 42.50 | 3.24 |
330 | 331 | 6.695278 | GGATTAGATTCTTTCGTGAGAGAGTG | 59.305 | 42.308 | 0.00 | 0.00 | 42.50 | 3.51 |
331 | 332 | 6.819397 | TTAGATTCTTTCGTGAGAGAGTGA | 57.181 | 37.500 | 0.00 | 0.00 | 42.50 | 3.41 |
332 | 333 | 5.054390 | AGATTCTTTCGTGAGAGAGTGAC | 57.946 | 43.478 | 0.00 | 0.00 | 42.50 | 3.67 |
333 | 334 | 4.764823 | AGATTCTTTCGTGAGAGAGTGACT | 59.235 | 41.667 | 0.00 | 0.00 | 42.50 | 3.41 |
337 | 338 | 3.833545 | TTCGTGAGAGAGTGACTTAGC | 57.166 | 47.619 | 0.00 | 0.00 | 43.69 | 3.09 |
342 | 343 | 2.232452 | TGAGAGAGTGACTTAGCCTTGC | 59.768 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
356 | 357 | 1.133790 | GCCTTGCTTAGCTGATGTTGG | 59.866 | 52.381 | 5.60 | 0.00 | 0.00 | 3.77 |
360 | 361 | 2.426522 | TGCTTAGCTGATGTTGGTGTC | 58.573 | 47.619 | 5.60 | 0.00 | 0.00 | 3.67 |
361 | 362 | 2.038952 | TGCTTAGCTGATGTTGGTGTCT | 59.961 | 45.455 | 5.60 | 0.00 | 0.00 | 3.41 |
370 | 371 | 3.505680 | TGATGTTGGTGTCTGGTTTATGC | 59.494 | 43.478 | 0.00 | 0.00 | 0.00 | 3.14 |
371 | 372 | 1.876799 | TGTTGGTGTCTGGTTTATGCG | 59.123 | 47.619 | 0.00 | 0.00 | 0.00 | 4.73 |
385 | 386 | 3.775661 | TTATGCGAGTCGAGATGTTCA | 57.224 | 42.857 | 18.61 | 2.66 | 0.00 | 3.18 |
389 | 390 | 2.263077 | GCGAGTCGAGATGTTCACATT | 58.737 | 47.619 | 18.61 | 0.00 | 36.57 | 2.71 |
396 | 397 | 4.213270 | GTCGAGATGTTCACATTTTGGTCA | 59.787 | 41.667 | 0.00 | 0.00 | 36.57 | 4.02 |
397 | 398 | 4.452114 | TCGAGATGTTCACATTTTGGTCAG | 59.548 | 41.667 | 0.00 | 0.00 | 36.57 | 3.51 |
401 | 694 | 2.964464 | TGTTCACATTTTGGTCAGGCAT | 59.036 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
421 | 714 | 8.299570 | CAGGCATCTTGTAATTAAACTTTCTGT | 58.700 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
456 | 749 | 6.911484 | ATTTTTCTTTCTCAAATACGCACG | 57.089 | 33.333 | 0.00 | 0.00 | 0.00 | 5.34 |
457 | 750 | 5.412526 | TTTTCTTTCTCAAATACGCACGT | 57.587 | 34.783 | 0.00 | 0.00 | 0.00 | 4.49 |
458 | 751 | 4.383774 | TTCTTTCTCAAATACGCACGTG | 57.616 | 40.909 | 12.28 | 12.28 | 0.00 | 4.49 |
459 | 752 | 3.386486 | TCTTTCTCAAATACGCACGTGT | 58.614 | 40.909 | 18.38 | 0.00 | 0.00 | 4.49 |
460 | 753 | 3.427528 | TCTTTCTCAAATACGCACGTGTC | 59.572 | 43.478 | 18.38 | 8.63 | 0.00 | 3.67 |
462 | 755 | 2.954316 | TCTCAAATACGCACGTGTCAT | 58.046 | 42.857 | 18.38 | 5.16 | 0.00 | 3.06 |
463 | 756 | 3.322369 | TCTCAAATACGCACGTGTCATT | 58.678 | 40.909 | 18.38 | 11.00 | 0.00 | 2.57 |
464 | 757 | 3.743911 | TCTCAAATACGCACGTGTCATTT | 59.256 | 39.130 | 18.38 | 15.90 | 0.00 | 2.32 |
465 | 758 | 4.924462 | TCTCAAATACGCACGTGTCATTTA | 59.076 | 37.500 | 18.38 | 2.04 | 0.00 | 1.40 |
466 | 759 | 5.579119 | TCTCAAATACGCACGTGTCATTTAT | 59.421 | 36.000 | 18.38 | 4.31 | 0.00 | 1.40 |
467 | 760 | 6.091577 | TCTCAAATACGCACGTGTCATTTATT | 59.908 | 34.615 | 18.38 | 9.77 | 0.00 | 1.40 |
468 | 761 | 7.275999 | TCTCAAATACGCACGTGTCATTTATTA | 59.724 | 33.333 | 18.38 | 8.25 | 0.00 | 0.98 |
469 | 762 | 7.911343 | TCAAATACGCACGTGTCATTTATTAT | 58.089 | 30.769 | 18.38 | 0.28 | 0.00 | 1.28 |
470 | 763 | 9.032420 | TCAAATACGCACGTGTCATTTATTATA | 57.968 | 29.630 | 18.38 | 3.20 | 0.00 | 0.98 |
471 | 764 | 9.301606 | CAAATACGCACGTGTCATTTATTATAG | 57.698 | 33.333 | 18.38 | 4.31 | 0.00 | 1.31 |
472 | 765 | 8.806177 | AATACGCACGTGTCATTTATTATAGA | 57.194 | 30.769 | 18.38 | 0.00 | 0.00 | 1.98 |
473 | 766 | 8.806177 | ATACGCACGTGTCATTTATTATAGAA | 57.194 | 30.769 | 18.38 | 0.00 | 0.00 | 2.10 |
474 | 767 | 7.161829 | ACGCACGTGTCATTTATTATAGAAG | 57.838 | 36.000 | 18.38 | 0.00 | 0.00 | 2.85 |
475 | 768 | 6.976349 | ACGCACGTGTCATTTATTATAGAAGA | 59.024 | 34.615 | 18.38 | 0.00 | 0.00 | 2.87 |
476 | 769 | 7.490079 | ACGCACGTGTCATTTATTATAGAAGAA | 59.510 | 33.333 | 18.38 | 0.00 | 0.00 | 2.52 |
477 | 770 | 8.325282 | CGCACGTGTCATTTATTATAGAAGAAA | 58.675 | 33.333 | 18.38 | 0.00 | 30.73 | 2.52 |
478 | 771 | 9.638300 | GCACGTGTCATTTATTATAGAAGAAAG | 57.362 | 33.333 | 18.38 | 0.00 | 29.73 | 2.62 |
480 | 773 | 9.326413 | ACGTGTCATTTATTATAGAAGAAAGGG | 57.674 | 33.333 | 2.51 | 0.00 | 30.53 | 3.95 |
481 | 774 | 8.774586 | CGTGTCATTTATTATAGAAGAAAGGGG | 58.225 | 37.037 | 2.51 | 0.00 | 30.53 | 4.79 |
482 | 775 | 9.847224 | GTGTCATTTATTATAGAAGAAAGGGGA | 57.153 | 33.333 | 2.51 | 0.00 | 30.53 | 4.81 |
500 | 793 | 3.828921 | GGGATAAGTACCCCAAATCCAC | 58.171 | 50.000 | 0.34 | 0.00 | 42.24 | 4.02 |
501 | 794 | 3.203487 | GGGATAAGTACCCCAAATCCACA | 59.797 | 47.826 | 0.34 | 0.00 | 42.24 | 4.17 |
502 | 795 | 4.461198 | GGATAAGTACCCCAAATCCACAG | 58.539 | 47.826 | 0.00 | 0.00 | 36.83 | 3.66 |
503 | 796 | 4.079958 | GGATAAGTACCCCAAATCCACAGT | 60.080 | 45.833 | 0.00 | 0.00 | 36.83 | 3.55 |
504 | 797 | 3.895704 | AAGTACCCCAAATCCACAGTT | 57.104 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
505 | 798 | 6.353255 | GGATAAGTACCCCAAATCCACAGTTA | 60.353 | 42.308 | 0.00 | 0.00 | 36.83 | 2.24 |
506 | 799 | 4.296621 | AGTACCCCAAATCCACAGTTAC | 57.703 | 45.455 | 0.00 | 0.00 | 0.00 | 2.50 |
507 | 800 | 3.653836 | AGTACCCCAAATCCACAGTTACA | 59.346 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
508 | 801 | 3.603965 | ACCCCAAATCCACAGTTACAA | 57.396 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
509 | 802 | 3.496331 | ACCCCAAATCCACAGTTACAAG | 58.504 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
510 | 803 | 3.117284 | ACCCCAAATCCACAGTTACAAGT | 60.117 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
511 | 804 | 3.506067 | CCCCAAATCCACAGTTACAAGTC | 59.494 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
512 | 805 | 4.398319 | CCCAAATCCACAGTTACAAGTCT | 58.602 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
513 | 806 | 4.455877 | CCCAAATCCACAGTTACAAGTCTC | 59.544 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
514 | 807 | 4.455877 | CCAAATCCACAGTTACAAGTCTCC | 59.544 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
515 | 808 | 5.308825 | CAAATCCACAGTTACAAGTCTCCT | 58.691 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
516 | 809 | 6.464222 | CAAATCCACAGTTACAAGTCTCCTA | 58.536 | 40.000 | 0.00 | 0.00 | 0.00 | 2.94 |
517 | 810 | 6.875972 | AATCCACAGTTACAAGTCTCCTAT | 57.124 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
518 | 811 | 7.973048 | AATCCACAGTTACAAGTCTCCTATA | 57.027 | 36.000 | 0.00 | 0.00 | 0.00 | 1.31 |
519 | 812 | 7.973048 | ATCCACAGTTACAAGTCTCCTATAA | 57.027 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
520 | 813 | 7.786046 | TCCACAGTTACAAGTCTCCTATAAA | 57.214 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
521 | 814 | 8.375493 | TCCACAGTTACAAGTCTCCTATAAAT | 57.625 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
522 | 815 | 9.483489 | TCCACAGTTACAAGTCTCCTATAAATA | 57.517 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
532 | 825 | 9.088512 | CAAGTCTCCTATAAATATATGTTCCGC | 57.911 | 37.037 | 0.00 | 0.00 | 0.00 | 5.54 |
533 | 826 | 7.783042 | AGTCTCCTATAAATATATGTTCCGCC | 58.217 | 38.462 | 0.00 | 0.00 | 0.00 | 6.13 |
534 | 827 | 7.399191 | AGTCTCCTATAAATATATGTTCCGCCA | 59.601 | 37.037 | 0.00 | 0.00 | 0.00 | 5.69 |
535 | 828 | 8.204836 | GTCTCCTATAAATATATGTTCCGCCAT | 58.795 | 37.037 | 0.00 | 0.00 | 0.00 | 4.40 |
536 | 829 | 8.768397 | TCTCCTATAAATATATGTTCCGCCATT | 58.232 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
537 | 830 | 8.958119 | TCCTATAAATATATGTTCCGCCATTC | 57.042 | 34.615 | 0.00 | 0.00 | 0.00 | 2.67 |
538 | 831 | 7.709182 | TCCTATAAATATATGTTCCGCCATTCG | 59.291 | 37.037 | 0.00 | 0.00 | 38.08 | 3.34 |
539 | 832 | 4.419522 | AAATATATGTTCCGCCATTCGC | 57.580 | 40.909 | 0.00 | 0.00 | 36.73 | 4.70 |
548 | 841 | 3.706140 | GCCATTCGCGTACTCCTG | 58.294 | 61.111 | 5.77 | 0.00 | 0.00 | 3.86 |
549 | 842 | 1.141019 | GCCATTCGCGTACTCCTGA | 59.859 | 57.895 | 5.77 | 0.00 | 0.00 | 3.86 |
552 | 845 | 1.927174 | CCATTCGCGTACTCCTGAAAG | 59.073 | 52.381 | 5.77 | 0.00 | 0.00 | 2.62 |
556 | 849 | 3.374220 | TCGCGTACTCCTGAAAGAAAA | 57.626 | 42.857 | 5.77 | 0.00 | 34.07 | 2.29 |
559 | 852 | 3.120991 | CGCGTACTCCTGAAAGAAAACTG | 60.121 | 47.826 | 0.00 | 0.00 | 34.07 | 3.16 |
649 | 955 | 2.264480 | CCATCTGGTGTTCGCCGA | 59.736 | 61.111 | 0.00 | 0.00 | 0.00 | 5.54 |
760 | 1072 | 4.803426 | GCACGCTCTGTCCCTCGG | 62.803 | 72.222 | 0.00 | 0.00 | 0.00 | 4.63 |
804 | 1116 | 2.930019 | CCACAGCAGTCCTCCCCA | 60.930 | 66.667 | 0.00 | 0.00 | 0.00 | 4.96 |
813 | 1125 | 3.246112 | TCCTCCCCAACCACGTGG | 61.246 | 66.667 | 32.83 | 32.83 | 42.17 | 4.94 |
883 | 1195 | 2.022718 | AGCAAACTCTGGAGTCCTCT | 57.977 | 50.000 | 11.33 | 0.00 | 41.58 | 3.69 |
925 | 1241 | 0.172803 | GCCCCGATCGATATAAGCGT | 59.827 | 55.000 | 18.66 | 0.00 | 0.00 | 5.07 |
989 | 1309 | 7.591421 | TGAATCTCTATACCCATAACGACAA | 57.409 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1107 | 1427 | 2.436646 | CTTGATGCCGCGTCCCTT | 60.437 | 61.111 | 10.12 | 0.00 | 0.00 | 3.95 |
1479 | 1799 | 1.081641 | CGTGAGTGACCGTAACGCT | 60.082 | 57.895 | 0.00 | 0.00 | 0.00 | 5.07 |
1728 | 2051 | 0.474660 | AGAGGCTGGTGGAGAAGGTT | 60.475 | 55.000 | 0.00 | 0.00 | 0.00 | 3.50 |
1779 | 2102 | 4.790962 | AGCGTCGACGAGGGGCTA | 62.791 | 66.667 | 39.74 | 0.00 | 43.02 | 3.93 |
1780 | 2103 | 4.549516 | GCGTCGACGAGGGGCTAC | 62.550 | 72.222 | 39.74 | 16.64 | 43.02 | 3.58 |
1808 | 2131 | 4.707030 | TGCAGCATTTCCTCTTGTAATG | 57.293 | 40.909 | 0.00 | 0.00 | 33.49 | 1.90 |
1816 | 2139 | 5.794687 | TTTCCTCTTGTAATGCGTGTATG | 57.205 | 39.130 | 0.00 | 0.00 | 0.00 | 2.39 |
1817 | 2140 | 4.465632 | TCCTCTTGTAATGCGTGTATGT | 57.534 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
1818 | 2141 | 4.180817 | TCCTCTTGTAATGCGTGTATGTG | 58.819 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
1819 | 2142 | 3.242413 | CCTCTTGTAATGCGTGTATGTGC | 60.242 | 47.826 | 0.00 | 0.00 | 0.00 | 4.57 |
1820 | 2143 | 3.595173 | TCTTGTAATGCGTGTATGTGCT | 58.405 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
1821 | 2144 | 3.370672 | TCTTGTAATGCGTGTATGTGCTG | 59.629 | 43.478 | 0.00 | 0.00 | 0.00 | 4.41 |
1822 | 2145 | 1.396648 | TGTAATGCGTGTATGTGCTGC | 59.603 | 47.619 | 0.00 | 0.00 | 0.00 | 5.25 |
1823 | 2146 | 0.649993 | TAATGCGTGTATGTGCTGCG | 59.350 | 50.000 | 0.00 | 0.00 | 0.00 | 5.18 |
1824 | 2147 | 1.980951 | AATGCGTGTATGTGCTGCGG | 61.981 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
1825 | 2148 | 2.813474 | GCGTGTATGTGCTGCGGA | 60.813 | 61.111 | 0.00 | 0.00 | 0.00 | 5.54 |
1826 | 2149 | 2.387445 | GCGTGTATGTGCTGCGGAA | 61.387 | 57.895 | 0.00 | 0.00 | 0.00 | 4.30 |
1827 | 2150 | 1.709760 | CGTGTATGTGCTGCGGAAG | 59.290 | 57.895 | 0.00 | 0.00 | 0.00 | 3.46 |
1828 | 2151 | 0.735978 | CGTGTATGTGCTGCGGAAGA | 60.736 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
1829 | 2152 | 1.002366 | GTGTATGTGCTGCGGAAGAG | 58.998 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1830 | 2153 | 0.608130 | TGTATGTGCTGCGGAAGAGT | 59.392 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
1831 | 2154 | 1.822371 | TGTATGTGCTGCGGAAGAGTA | 59.178 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
1832 | 2155 | 2.194271 | GTATGTGCTGCGGAAGAGTAC | 58.806 | 52.381 | 0.00 | 0.00 | 0.00 | 2.73 |
1833 | 2156 | 0.898320 | ATGTGCTGCGGAAGAGTACT | 59.102 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
1834 | 2157 | 0.679505 | TGTGCTGCGGAAGAGTACTT | 59.320 | 50.000 | 0.00 | 0.00 | 39.24 | 2.24 |
1850 | 2173 | 0.674895 | ACTTCGTGAAGATGGGCTGC | 60.675 | 55.000 | 16.10 | 0.00 | 40.79 | 5.25 |
1882 | 2646 | 7.422399 | TGGTTTTGTTTTAGCTTATCTGTGTC | 58.578 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
1956 | 4215 | 2.035704 | ACTGCTCAGTCCATGATCGATC | 59.964 | 50.000 | 18.72 | 18.72 | 36.92 | 3.69 |
1981 | 4240 | 3.738282 | GTGAGCGTAGGATCAATCACATC | 59.262 | 47.826 | 4.74 | 0.00 | 40.82 | 3.06 |
1982 | 4241 | 3.384467 | TGAGCGTAGGATCAATCACATCA | 59.616 | 43.478 | 0.00 | 0.00 | 35.24 | 3.07 |
1983 | 4242 | 3.722147 | AGCGTAGGATCAATCACATCAC | 58.278 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
2003 | 4303 | 0.324275 | CCGACAAATCCAACCCCCAT | 60.324 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2005 | 4305 | 1.615651 | CGACAAATCCAACCCCCATCA | 60.616 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
2017 | 4317 | 0.831288 | CCCCATCACCCTGTTTTGCA | 60.831 | 55.000 | 0.00 | 0.00 | 0.00 | 4.08 |
2018 | 4318 | 0.318120 | CCCATCACCCTGTTTTGCAC | 59.682 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2019 | 4319 | 1.331214 | CCATCACCCTGTTTTGCACT | 58.669 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2021 | 4321 | 2.890311 | CCATCACCCTGTTTTGCACTTA | 59.110 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
2023 | 4323 | 3.290948 | TCACCCTGTTTTGCACTTAGT | 57.709 | 42.857 | 0.00 | 0.00 | 0.00 | 2.24 |
2024 | 4324 | 3.211045 | TCACCCTGTTTTGCACTTAGTC | 58.789 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
2025 | 4325 | 2.032030 | CACCCTGTTTTGCACTTAGTCG | 60.032 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2026 | 4326 | 2.158871 | ACCCTGTTTTGCACTTAGTCGA | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
2027 | 4327 | 2.875933 | CCCTGTTTTGCACTTAGTCGAA | 59.124 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
2028 | 4328 | 3.303791 | CCCTGTTTTGCACTTAGTCGAAC | 60.304 | 47.826 | 0.00 | 0.00 | 0.00 | 3.95 |
2029 | 4329 | 3.560068 | CCTGTTTTGCACTTAGTCGAACT | 59.440 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
2030 | 4330 | 4.035208 | CCTGTTTTGCACTTAGTCGAACTT | 59.965 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
2031 | 4331 | 5.448632 | CCTGTTTTGCACTTAGTCGAACTTT | 60.449 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
2032 | 4332 | 5.328691 | TGTTTTGCACTTAGTCGAACTTTG | 58.671 | 37.500 | 0.00 | 0.00 | 0.00 | 2.77 |
2033 | 4333 | 5.122554 | TGTTTTGCACTTAGTCGAACTTTGA | 59.877 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2034 | 4334 | 4.789095 | TTGCACTTAGTCGAACTTTGAC | 57.211 | 40.909 | 1.24 | 1.24 | 36.60 | 3.18 |
2035 | 4335 | 3.128349 | TGCACTTAGTCGAACTTTGACC | 58.872 | 45.455 | 5.63 | 0.00 | 37.04 | 4.02 |
2036 | 4336 | 2.155155 | GCACTTAGTCGAACTTTGACCG | 59.845 | 50.000 | 5.63 | 0.00 | 37.04 | 4.79 |
2037 | 4337 | 3.635331 | CACTTAGTCGAACTTTGACCGA | 58.365 | 45.455 | 5.63 | 0.00 | 37.04 | 4.69 |
2038 | 4338 | 3.669122 | CACTTAGTCGAACTTTGACCGAG | 59.331 | 47.826 | 5.63 | 6.67 | 37.04 | 4.63 |
2039 | 4339 | 3.567164 | ACTTAGTCGAACTTTGACCGAGA | 59.433 | 43.478 | 12.92 | 0.00 | 37.04 | 4.04 |
2040 | 4340 | 2.418983 | AGTCGAACTTTGACCGAGAC | 57.581 | 50.000 | 5.63 | 0.00 | 37.04 | 3.36 |
2041 | 4341 | 1.679680 | AGTCGAACTTTGACCGAGACA | 59.320 | 47.619 | 5.63 | 0.00 | 37.04 | 3.41 |
2042 | 4342 | 2.100252 | AGTCGAACTTTGACCGAGACAA | 59.900 | 45.455 | 5.63 | 0.00 | 37.04 | 3.18 |
2043 | 4343 | 2.861935 | GTCGAACTTTGACCGAGACAAA | 59.138 | 45.455 | 0.00 | 0.00 | 36.15 | 2.83 |
2044 | 4344 | 3.307782 | GTCGAACTTTGACCGAGACAAAA | 59.692 | 43.478 | 0.00 | 0.00 | 36.91 | 2.44 |
2045 | 4345 | 3.307782 | TCGAACTTTGACCGAGACAAAAC | 59.692 | 43.478 | 0.00 | 0.00 | 36.91 | 2.43 |
2046 | 4346 | 3.308866 | CGAACTTTGACCGAGACAAAACT | 59.691 | 43.478 | 0.00 | 0.00 | 36.91 | 2.66 |
2047 | 4347 | 4.550255 | CGAACTTTGACCGAGACAAAACTC | 60.550 | 45.833 | 0.00 | 0.00 | 36.91 | 3.01 |
2048 | 4348 | 3.203716 | ACTTTGACCGAGACAAAACTCC | 58.796 | 45.455 | 0.00 | 0.00 | 36.91 | 3.85 |
2049 | 4349 | 3.118371 | ACTTTGACCGAGACAAAACTCCT | 60.118 | 43.478 | 0.00 | 0.00 | 36.91 | 3.69 |
2050 | 4350 | 3.553828 | TTGACCGAGACAAAACTCCTT | 57.446 | 42.857 | 0.00 | 0.00 | 33.83 | 3.36 |
2051 | 4351 | 3.107642 | TGACCGAGACAAAACTCCTTC | 57.892 | 47.619 | 0.00 | 0.00 | 33.83 | 3.46 |
2052 | 4352 | 2.224209 | TGACCGAGACAAAACTCCTTCC | 60.224 | 50.000 | 0.00 | 0.00 | 33.83 | 3.46 |
2053 | 4353 | 1.071857 | ACCGAGACAAAACTCCTTCCC | 59.928 | 52.381 | 0.00 | 0.00 | 33.83 | 3.97 |
2054 | 4354 | 1.071699 | CCGAGACAAAACTCCTTCCCA | 59.928 | 52.381 | 0.00 | 0.00 | 33.83 | 4.37 |
2055 | 4355 | 2.143925 | CGAGACAAAACTCCTTCCCAC | 58.856 | 52.381 | 0.00 | 0.00 | 33.83 | 4.61 |
2056 | 4356 | 2.484770 | CGAGACAAAACTCCTTCCCACA | 60.485 | 50.000 | 0.00 | 0.00 | 33.83 | 4.17 |
2057 | 4357 | 2.879026 | GAGACAAAACTCCTTCCCACAC | 59.121 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2058 | 4358 | 2.509964 | AGACAAAACTCCTTCCCACACT | 59.490 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
2059 | 4359 | 3.053619 | AGACAAAACTCCTTCCCACACTT | 60.054 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
2060 | 4360 | 3.699538 | GACAAAACTCCTTCCCACACTTT | 59.300 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
2061 | 4361 | 3.447229 | ACAAAACTCCTTCCCACACTTTG | 59.553 | 43.478 | 0.00 | 0.00 | 0.00 | 2.77 |
2062 | 4362 | 3.662759 | AAACTCCTTCCCACACTTTGA | 57.337 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
2063 | 4363 | 2.938956 | ACTCCTTCCCACACTTTGAG | 57.061 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2064 | 4364 | 1.202818 | ACTCCTTCCCACACTTTGAGC | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
2065 | 4365 | 0.843309 | TCCTTCCCACACTTTGAGCA | 59.157 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2066 | 4366 | 1.214175 | TCCTTCCCACACTTTGAGCAA | 59.786 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
2067 | 4367 | 2.031120 | CCTTCCCACACTTTGAGCAAA | 58.969 | 47.619 | 0.00 | 0.00 | 0.00 | 3.68 |
2068 | 4368 | 2.430332 | CCTTCCCACACTTTGAGCAAAA | 59.570 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
2081 | 4381 | 3.141398 | TGAGCAAAAGGTGTAGCTTCAG | 58.859 | 45.455 | 0.00 | 0.00 | 37.48 | 3.02 |
2082 | 4382 | 3.142174 | GAGCAAAAGGTGTAGCTTCAGT | 58.858 | 45.455 | 0.00 | 0.00 | 37.48 | 3.41 |
2091 | 4391 | 5.621193 | AGGTGTAGCTTCAGTAATTGTGTT | 58.379 | 37.500 | 0.00 | 0.00 | 0.00 | 3.32 |
2092 | 4392 | 5.470098 | AGGTGTAGCTTCAGTAATTGTGTTG | 59.530 | 40.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2093 | 4393 | 5.334879 | GGTGTAGCTTCAGTAATTGTGTTGG | 60.335 | 44.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2094 | 4394 | 4.759693 | TGTAGCTTCAGTAATTGTGTTGGG | 59.240 | 41.667 | 0.00 | 0.00 | 0.00 | 4.12 |
2095 | 4395 | 2.558359 | AGCTTCAGTAATTGTGTTGGGC | 59.442 | 45.455 | 0.00 | 0.00 | 0.00 | 5.36 |
2125 | 4426 | 7.444629 | TGATTCACAAGAATTCTCCTTTCTG | 57.555 | 36.000 | 8.78 | 4.73 | 44.30 | 3.02 |
2132 | 4433 | 3.054802 | AGAATTCTCCTTTCTGTGCGGAT | 60.055 | 43.478 | 0.88 | 0.00 | 32.30 | 4.18 |
2133 | 4434 | 4.162320 | AGAATTCTCCTTTCTGTGCGGATA | 59.838 | 41.667 | 0.88 | 0.00 | 32.30 | 2.59 |
2134 | 4435 | 3.973206 | TTCTCCTTTCTGTGCGGATAA | 57.027 | 42.857 | 0.00 | 0.00 | 0.00 | 1.75 |
2135 | 4436 | 4.487714 | TTCTCCTTTCTGTGCGGATAAT | 57.512 | 40.909 | 0.00 | 0.00 | 0.00 | 1.28 |
2151 | 4452 | 6.714810 | TGCGGATAATTAATAATGGAGCAGTT | 59.285 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
2177 | 4478 | 5.856126 | TGGAAACATCTCATCAAACGTAC | 57.144 | 39.130 | 0.00 | 0.00 | 33.40 | 3.67 |
2182 | 4483 | 5.407407 | ACATCTCATCAAACGTACTTCCT | 57.593 | 39.130 | 0.00 | 0.00 | 0.00 | 3.36 |
2184 | 4485 | 4.451629 | TCTCATCAAACGTACTTCCTCC | 57.548 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
2185 | 4486 | 3.119602 | TCTCATCAAACGTACTTCCTCCG | 60.120 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
2186 | 4487 | 1.659098 | CATCAAACGTACTTCCTCCGC | 59.341 | 52.381 | 0.00 | 0.00 | 0.00 | 5.54 |
2187 | 4488 | 0.037975 | TCAAACGTACTTCCTCCGCC | 60.038 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2188 | 4489 | 1.017701 | CAAACGTACTTCCTCCGCCC | 61.018 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2191 | 4492 | 2.703798 | CGTACTTCCTCCGCCCGAA | 61.704 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
2194 | 4495 | 0.906775 | TACTTCCTCCGCCCGAAAAT | 59.093 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2196 | 4497 | 1.296727 | CTTCCTCCGCCCGAAAATAC | 58.703 | 55.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2197 | 4498 | 0.906775 | TTCCTCCGCCCGAAAATACT | 59.093 | 50.000 | 0.00 | 0.00 | 0.00 | 2.12 |
2199 | 4500 | 2.109774 | TCCTCCGCCCGAAAATACTTA | 58.890 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
2200 | 4501 | 2.701951 | TCCTCCGCCCGAAAATACTTAT | 59.298 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
2201 | 4502 | 3.064931 | CCTCCGCCCGAAAATACTTATC | 58.935 | 50.000 | 0.00 | 0.00 | 0.00 | 1.75 |
2203 | 4504 | 4.315803 | CTCCGCCCGAAAATACTTATCAT | 58.684 | 43.478 | 0.00 | 0.00 | 0.00 | 2.45 |
2204 | 4505 | 4.312443 | TCCGCCCGAAAATACTTATCATC | 58.688 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
2205 | 4506 | 4.062293 | CCGCCCGAAAATACTTATCATCA | 58.938 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
2206 | 4507 | 4.513692 | CCGCCCGAAAATACTTATCATCAA | 59.486 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
2207 | 4508 | 5.008217 | CCGCCCGAAAATACTTATCATCAAA | 59.992 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2208 | 4509 | 6.459024 | CCGCCCGAAAATACTTATCATCAAAA | 60.459 | 38.462 | 0.00 | 0.00 | 0.00 | 2.44 |
2209 | 4510 | 6.413818 | CGCCCGAAAATACTTATCATCAAAAC | 59.586 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
2210 | 4511 | 7.254852 | GCCCGAAAATACTTATCATCAAAACA | 58.745 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
2211 | 4512 | 7.757624 | GCCCGAAAATACTTATCATCAAAACAA | 59.242 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
2212 | 4513 | 9.632807 | CCCGAAAATACTTATCATCAAAACAAA | 57.367 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
2264 | 4565 | 4.040445 | ACGGTCAAATCAACAAACCAAG | 57.960 | 40.909 | 0.00 | 0.00 | 0.00 | 3.61 |
2265 | 4566 | 2.794350 | CGGTCAAATCAACAAACCAAGC | 59.206 | 45.455 | 0.00 | 0.00 | 0.00 | 4.01 |
2396 | 4722 | 5.585390 | CACATCTGGCATCATCCTTAAAAC | 58.415 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
2504 | 4830 | 4.346730 | ACCATGCAATCATCCAAAGAAGA | 58.653 | 39.130 | 0.00 | 0.00 | 0.00 | 2.87 |
2594 | 4922 | 6.088824 | GCACAGACCATTTAACTTGATCTTG | 58.911 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2597 | 4925 | 6.998074 | ACAGACCATTTAACTTGATCTTGACA | 59.002 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
2733 | 5061 | 9.880157 | AATAAATGCAGAATCACTAAGCAAAAT | 57.120 | 25.926 | 0.00 | 0.00 | 38.85 | 1.82 |
2735 | 5063 | 5.963176 | TGCAGAATCACTAAGCAAAATCA | 57.037 | 34.783 | 0.00 | 0.00 | 31.42 | 2.57 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
14 | 15 | 2.688446 | CCCACACTTCTCTAGCATACGA | 59.312 | 50.000 | 0.00 | 0.00 | 0.00 | 3.43 |
15 | 16 | 2.688446 | TCCCACACTTCTCTAGCATACG | 59.312 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
63 | 64 | 3.679917 | CGTTTGAGTAGATGCCTGGATGT | 60.680 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
64 | 65 | 2.868583 | CGTTTGAGTAGATGCCTGGATG | 59.131 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
65 | 66 | 2.743183 | GCGTTTGAGTAGATGCCTGGAT | 60.743 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
66 | 67 | 1.405526 | GCGTTTGAGTAGATGCCTGGA | 60.406 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
67 | 68 | 1.009829 | GCGTTTGAGTAGATGCCTGG | 58.990 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
68 | 69 | 1.394917 | GTGCGTTTGAGTAGATGCCTG | 59.605 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
69 | 70 | 1.001974 | TGTGCGTTTGAGTAGATGCCT | 59.998 | 47.619 | 0.00 | 0.00 | 0.00 | 4.75 |
70 | 71 | 1.438651 | TGTGCGTTTGAGTAGATGCC | 58.561 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
71 | 72 | 2.416547 | ACATGTGCGTTTGAGTAGATGC | 59.583 | 45.455 | 0.00 | 0.00 | 32.33 | 3.91 |
72 | 73 | 4.152223 | TGAACATGTGCGTTTGAGTAGATG | 59.848 | 41.667 | 0.00 | 0.00 | 34.58 | 2.90 |
73 | 74 | 4.314961 | TGAACATGTGCGTTTGAGTAGAT | 58.685 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
74 | 75 | 3.723260 | TGAACATGTGCGTTTGAGTAGA | 58.277 | 40.909 | 0.00 | 0.00 | 0.00 | 2.59 |
75 | 76 | 3.740832 | TCTGAACATGTGCGTTTGAGTAG | 59.259 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
76 | 77 | 3.723260 | TCTGAACATGTGCGTTTGAGTA | 58.277 | 40.909 | 0.00 | 0.00 | 0.00 | 2.59 |
77 | 78 | 2.545526 | CTCTGAACATGTGCGTTTGAGT | 59.454 | 45.455 | 0.00 | 0.00 | 31.21 | 3.41 |
78 | 79 | 2.802247 | TCTCTGAACATGTGCGTTTGAG | 59.198 | 45.455 | 0.00 | 4.46 | 34.19 | 3.02 |
79 | 80 | 2.832563 | TCTCTGAACATGTGCGTTTGA | 58.167 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
80 | 81 | 3.818961 | ATCTCTGAACATGTGCGTTTG | 57.181 | 42.857 | 0.00 | 0.00 | 0.00 | 2.93 |
81 | 82 | 3.058016 | CCAATCTCTGAACATGTGCGTTT | 60.058 | 43.478 | 0.00 | 0.00 | 0.00 | 3.60 |
82 | 83 | 2.485426 | CCAATCTCTGAACATGTGCGTT | 59.515 | 45.455 | 0.00 | 0.00 | 0.00 | 4.84 |
83 | 84 | 2.079158 | CCAATCTCTGAACATGTGCGT | 58.921 | 47.619 | 0.00 | 0.00 | 0.00 | 5.24 |
84 | 85 | 2.079158 | ACCAATCTCTGAACATGTGCG | 58.921 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
85 | 86 | 2.163010 | CCACCAATCTCTGAACATGTGC | 59.837 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
86 | 87 | 3.415212 | ACCACCAATCTCTGAACATGTG | 58.585 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
87 | 88 | 3.795688 | ACCACCAATCTCTGAACATGT | 57.204 | 42.857 | 0.00 | 0.00 | 0.00 | 3.21 |
88 | 89 | 4.520111 | TCAAACCACCAATCTCTGAACATG | 59.480 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
89 | 90 | 4.520492 | GTCAAACCACCAATCTCTGAACAT | 59.480 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
94 | 95 | 4.136796 | TCTTGTCAAACCACCAATCTCTG | 58.863 | 43.478 | 0.00 | 0.00 | 0.00 | 3.35 |
96 | 97 | 4.389374 | TCTCTTGTCAAACCACCAATCTC | 58.611 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
107 | 108 | 5.064707 | CGGTGAAACTTCTTCTCTTGTCAAA | 59.935 | 40.000 | 0.00 | 0.00 | 36.74 | 2.69 |
112 | 113 | 3.495001 | GTCCGGTGAAACTTCTTCTCTTG | 59.505 | 47.826 | 0.00 | 0.00 | 36.74 | 3.02 |
120 | 121 | 2.950433 | TGATACGTCCGGTGAAACTTC | 58.050 | 47.619 | 0.00 | 0.00 | 36.74 | 3.01 |
123 | 124 | 2.410730 | CACTTGATACGTCCGGTGAAAC | 59.589 | 50.000 | 0.00 | 0.00 | 31.72 | 2.78 |
124 | 125 | 2.036217 | ACACTTGATACGTCCGGTGAAA | 59.964 | 45.455 | 0.00 | 0.00 | 33.24 | 2.69 |
131 | 132 | 2.858344 | CGAATCCACACTTGATACGTCC | 59.142 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
143 | 144 | 2.131972 | CACAAACGAGTCGAATCCACA | 58.868 | 47.619 | 21.50 | 0.00 | 0.00 | 4.17 |
156 | 157 | 3.723835 | GCAAGCGGTACTAATCACAAACG | 60.724 | 47.826 | 0.00 | 0.00 | 0.00 | 3.60 |
167 | 168 | 0.944311 | CACAACGAGCAAGCGGTACT | 60.944 | 55.000 | 0.00 | 0.00 | 35.12 | 2.73 |
178 | 179 | 0.318441 | TCCTCTGCTTCCACAACGAG | 59.682 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
211 | 212 | 8.855110 | GGTGATCTCTTCTCATGAACTCTATTA | 58.145 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
214 | 215 | 6.430864 | AGGTGATCTCTTCTCATGAACTCTA | 58.569 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
218 | 219 | 4.161189 | TGGAGGTGATCTCTTCTCATGAAC | 59.839 | 45.833 | 6.82 | 0.00 | 42.10 | 3.18 |
224 | 225 | 3.513515 | AGTTGTGGAGGTGATCTCTTCTC | 59.486 | 47.826 | 6.82 | 0.77 | 42.10 | 2.87 |
227 | 228 | 3.392616 | ACAAGTTGTGGAGGTGATCTCTT | 59.607 | 43.478 | 7.96 | 0.00 | 42.10 | 2.85 |
238 | 239 | 1.064758 | ACCTGCTCAACAAGTTGTGGA | 60.065 | 47.619 | 12.58 | 12.58 | 41.16 | 4.02 |
268 | 269 | 0.178992 | CAAGCCTCCAGTCCCAAACA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
271 | 272 | 2.156098 | AGCAAGCCTCCAGTCCCAA | 61.156 | 57.895 | 0.00 | 0.00 | 0.00 | 4.12 |
272 | 273 | 2.530151 | AGCAAGCCTCCAGTCCCA | 60.530 | 61.111 | 0.00 | 0.00 | 0.00 | 4.37 |
280 | 281 | 1.642952 | CTTCGAAGCCAGCAAGCCTC | 61.643 | 60.000 | 13.09 | 0.00 | 0.00 | 4.70 |
282 | 283 | 0.673644 | TACTTCGAAGCCAGCAAGCC | 60.674 | 55.000 | 24.86 | 0.00 | 0.00 | 4.35 |
286 | 287 | 1.066858 | CCTTCTACTTCGAAGCCAGCA | 60.067 | 52.381 | 24.86 | 11.61 | 39.21 | 4.41 |
296 | 297 | 9.026074 | CACGAAAGAATCTAATCCTTCTACTTC | 57.974 | 37.037 | 0.00 | 0.00 | 31.60 | 3.01 |
297 | 298 | 8.750298 | TCACGAAAGAATCTAATCCTTCTACTT | 58.250 | 33.333 | 0.00 | 0.00 | 31.60 | 2.24 |
298 | 299 | 8.294954 | TCACGAAAGAATCTAATCCTTCTACT | 57.705 | 34.615 | 0.00 | 0.00 | 31.60 | 2.57 |
303 | 304 | 7.123547 | ACTCTCTCACGAAAGAATCTAATCCTT | 59.876 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
314 | 315 | 4.083217 | GCTAAGTCACTCTCTCACGAAAGA | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 2.52 |
327 | 328 | 2.569404 | AGCTAAGCAAGGCTAAGTCACT | 59.431 | 45.455 | 0.00 | 0.00 | 38.25 | 3.41 |
329 | 330 | 2.567169 | TCAGCTAAGCAAGGCTAAGTCA | 59.433 | 45.455 | 0.00 | 0.00 | 38.25 | 3.41 |
330 | 331 | 3.252974 | TCAGCTAAGCAAGGCTAAGTC | 57.747 | 47.619 | 0.00 | 0.00 | 38.25 | 3.01 |
331 | 332 | 3.054802 | ACATCAGCTAAGCAAGGCTAAGT | 60.055 | 43.478 | 0.00 | 0.00 | 38.25 | 2.24 |
332 | 333 | 3.539604 | ACATCAGCTAAGCAAGGCTAAG | 58.460 | 45.455 | 0.00 | 0.00 | 38.25 | 2.18 |
333 | 334 | 3.634397 | ACATCAGCTAAGCAAGGCTAA | 57.366 | 42.857 | 0.00 | 0.00 | 38.25 | 3.09 |
337 | 338 | 2.163010 | CACCAACATCAGCTAAGCAAGG | 59.837 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
342 | 343 | 3.005554 | CCAGACACCAACATCAGCTAAG | 58.994 | 50.000 | 0.00 | 0.00 | 0.00 | 2.18 |
356 | 357 | 1.654105 | CGACTCGCATAAACCAGACAC | 59.346 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
360 | 361 | 2.561733 | TCTCGACTCGCATAAACCAG | 57.438 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
361 | 362 | 2.165641 | ACATCTCGACTCGCATAAACCA | 59.834 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
370 | 371 | 4.434725 | CCAAAATGTGAACATCTCGACTCG | 60.435 | 45.833 | 0.00 | 0.00 | 35.10 | 4.18 |
371 | 372 | 4.452455 | ACCAAAATGTGAACATCTCGACTC | 59.548 | 41.667 | 0.00 | 0.00 | 35.10 | 3.36 |
385 | 386 | 3.233507 | ACAAGATGCCTGACCAAAATGT | 58.766 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
389 | 390 | 7.232534 | AGTTTAATTACAAGATGCCTGACCAAA | 59.767 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
396 | 397 | 8.409358 | ACAGAAAGTTTAATTACAAGATGCCT | 57.591 | 30.769 | 0.00 | 0.00 | 0.00 | 4.75 |
397 | 398 | 8.515414 | AGACAGAAAGTTTAATTACAAGATGCC | 58.485 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
430 | 723 | 9.061610 | CGTGCGTATTTGAGAAAGAAAAATATT | 57.938 | 29.630 | 0.00 | 0.00 | 30.72 | 1.28 |
435 | 728 | 5.201910 | CACGTGCGTATTTGAGAAAGAAAA | 58.798 | 37.500 | 0.82 | 0.00 | 0.00 | 2.29 |
437 | 730 | 3.805422 | ACACGTGCGTATTTGAGAAAGAA | 59.195 | 39.130 | 17.22 | 0.00 | 0.00 | 2.52 |
438 | 731 | 3.386486 | ACACGTGCGTATTTGAGAAAGA | 58.614 | 40.909 | 17.22 | 0.00 | 0.00 | 2.52 |
439 | 732 | 3.183574 | TGACACGTGCGTATTTGAGAAAG | 59.816 | 43.478 | 17.22 | 0.00 | 0.00 | 2.62 |
440 | 733 | 3.124560 | TGACACGTGCGTATTTGAGAAA | 58.875 | 40.909 | 17.22 | 0.00 | 0.00 | 2.52 |
441 | 734 | 2.745102 | TGACACGTGCGTATTTGAGAA | 58.255 | 42.857 | 17.22 | 0.00 | 0.00 | 2.87 |
442 | 735 | 2.425578 | TGACACGTGCGTATTTGAGA | 57.574 | 45.000 | 17.22 | 0.00 | 0.00 | 3.27 |
443 | 736 | 3.722555 | AATGACACGTGCGTATTTGAG | 57.277 | 42.857 | 17.22 | 0.00 | 0.00 | 3.02 |
444 | 737 | 5.788055 | ATAAATGACACGTGCGTATTTGA | 57.212 | 34.783 | 23.93 | 14.24 | 0.00 | 2.69 |
445 | 738 | 9.301606 | CTATAATAAATGACACGTGCGTATTTG | 57.698 | 33.333 | 23.93 | 10.75 | 0.00 | 2.32 |
446 | 739 | 9.251792 | TCTATAATAAATGACACGTGCGTATTT | 57.748 | 29.630 | 17.22 | 19.85 | 0.00 | 1.40 |
447 | 740 | 8.806177 | TCTATAATAAATGACACGTGCGTATT | 57.194 | 30.769 | 17.22 | 10.85 | 0.00 | 1.89 |
448 | 741 | 8.806177 | TTCTATAATAAATGACACGTGCGTAT | 57.194 | 30.769 | 17.22 | 4.63 | 0.00 | 3.06 |
449 | 742 | 8.130469 | TCTTCTATAATAAATGACACGTGCGTA | 58.870 | 33.333 | 17.22 | 2.00 | 0.00 | 4.42 |
450 | 743 | 6.976349 | TCTTCTATAATAAATGACACGTGCGT | 59.024 | 34.615 | 17.22 | 7.18 | 0.00 | 5.24 |
451 | 744 | 7.389603 | TCTTCTATAATAAATGACACGTGCG | 57.610 | 36.000 | 17.22 | 0.00 | 0.00 | 5.34 |
452 | 745 | 9.638300 | CTTTCTTCTATAATAAATGACACGTGC | 57.362 | 33.333 | 17.22 | 9.30 | 0.00 | 5.34 |
454 | 747 | 9.326413 | CCCTTTCTTCTATAATAAATGACACGT | 57.674 | 33.333 | 0.00 | 0.00 | 0.00 | 4.49 |
455 | 748 | 8.774586 | CCCCTTTCTTCTATAATAAATGACACG | 58.225 | 37.037 | 0.00 | 0.00 | 0.00 | 4.49 |
456 | 749 | 9.847224 | TCCCCTTTCTTCTATAATAAATGACAC | 57.153 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
465 | 758 | 9.113797 | GGGTACTTATCCCCTTTCTTCTATAAT | 57.886 | 37.037 | 0.00 | 0.00 | 39.08 | 1.28 |
466 | 759 | 8.502047 | GGGTACTTATCCCCTTTCTTCTATAA | 57.498 | 38.462 | 0.00 | 0.00 | 39.08 | 0.98 |
480 | 773 | 4.079958 | ACTGTGGATTTGGGGTACTTATCC | 60.080 | 45.833 | 0.00 | 0.00 | 36.22 | 2.59 |
481 | 774 | 5.112129 | ACTGTGGATTTGGGGTACTTATC | 57.888 | 43.478 | 0.00 | 0.00 | 0.00 | 1.75 |
482 | 775 | 5.530176 | AACTGTGGATTTGGGGTACTTAT | 57.470 | 39.130 | 0.00 | 0.00 | 0.00 | 1.73 |
483 | 776 | 5.310068 | TGTAACTGTGGATTTGGGGTACTTA | 59.690 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
484 | 777 | 3.895704 | AACTGTGGATTTGGGGTACTT | 57.104 | 42.857 | 0.00 | 0.00 | 0.00 | 2.24 |
485 | 778 | 3.653836 | TGTAACTGTGGATTTGGGGTACT | 59.346 | 43.478 | 0.00 | 0.00 | 0.00 | 2.73 |
486 | 779 | 4.023726 | TGTAACTGTGGATTTGGGGTAC | 57.976 | 45.455 | 0.00 | 0.00 | 0.00 | 3.34 |
487 | 780 | 4.105057 | ACTTGTAACTGTGGATTTGGGGTA | 59.895 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
488 | 781 | 3.117284 | ACTTGTAACTGTGGATTTGGGGT | 60.117 | 43.478 | 0.00 | 0.00 | 0.00 | 4.95 |
489 | 782 | 3.496331 | ACTTGTAACTGTGGATTTGGGG | 58.504 | 45.455 | 0.00 | 0.00 | 0.00 | 4.96 |
490 | 783 | 4.398319 | AGACTTGTAACTGTGGATTTGGG | 58.602 | 43.478 | 0.00 | 0.00 | 0.00 | 4.12 |
491 | 784 | 4.455877 | GGAGACTTGTAACTGTGGATTTGG | 59.544 | 45.833 | 0.00 | 0.00 | 0.00 | 3.28 |
492 | 785 | 5.308825 | AGGAGACTTGTAACTGTGGATTTG | 58.691 | 41.667 | 0.00 | 0.00 | 37.44 | 2.32 |
493 | 786 | 5.568620 | AGGAGACTTGTAACTGTGGATTT | 57.431 | 39.130 | 0.00 | 0.00 | 37.44 | 2.17 |
494 | 787 | 6.875972 | ATAGGAGACTTGTAACTGTGGATT | 57.124 | 37.500 | 0.00 | 0.00 | 43.67 | 3.01 |
495 | 788 | 7.973048 | TTATAGGAGACTTGTAACTGTGGAT | 57.027 | 36.000 | 0.00 | 0.00 | 43.67 | 3.41 |
496 | 789 | 7.786046 | TTTATAGGAGACTTGTAACTGTGGA | 57.214 | 36.000 | 0.00 | 0.00 | 43.67 | 4.02 |
506 | 799 | 9.088512 | GCGGAACATATATTTATAGGAGACTTG | 57.911 | 37.037 | 0.00 | 0.00 | 43.67 | 3.16 |
507 | 800 | 8.258708 | GGCGGAACATATATTTATAGGAGACTT | 58.741 | 37.037 | 0.00 | 0.00 | 43.67 | 3.01 |
509 | 802 | 7.553334 | TGGCGGAACATATATTTATAGGAGAC | 58.447 | 38.462 | 0.00 | 0.00 | 0.00 | 3.36 |
510 | 803 | 7.727578 | TGGCGGAACATATATTTATAGGAGA | 57.272 | 36.000 | 0.00 | 0.00 | 0.00 | 3.71 |
511 | 804 | 8.964476 | AATGGCGGAACATATATTTATAGGAG | 57.036 | 34.615 | 0.00 | 0.00 | 0.00 | 3.69 |
512 | 805 | 7.709182 | CGAATGGCGGAACATATATTTATAGGA | 59.291 | 37.037 | 0.00 | 0.00 | 36.03 | 2.94 |
513 | 806 | 7.518370 | GCGAATGGCGGAACATATATTTATAGG | 60.518 | 40.741 | 0.00 | 0.00 | 41.29 | 2.57 |
514 | 807 | 7.345192 | GCGAATGGCGGAACATATATTTATAG | 58.655 | 38.462 | 0.00 | 0.00 | 41.29 | 1.31 |
515 | 808 | 7.241663 | GCGAATGGCGGAACATATATTTATA | 57.758 | 36.000 | 0.00 | 0.00 | 41.29 | 0.98 |
516 | 809 | 6.119144 | GCGAATGGCGGAACATATATTTAT | 57.881 | 37.500 | 0.00 | 0.00 | 41.29 | 1.40 |
517 | 810 | 5.539582 | GCGAATGGCGGAACATATATTTA | 57.460 | 39.130 | 0.00 | 0.00 | 41.29 | 1.40 |
518 | 811 | 4.419522 | GCGAATGGCGGAACATATATTT | 57.580 | 40.909 | 0.00 | 0.00 | 41.29 | 1.40 |
531 | 824 | 0.459585 | TTCAGGAGTACGCGAATGGC | 60.460 | 55.000 | 15.93 | 0.00 | 38.69 | 4.40 |
532 | 825 | 1.927174 | CTTTCAGGAGTACGCGAATGG | 59.073 | 52.381 | 15.93 | 0.00 | 0.00 | 3.16 |
533 | 826 | 2.876091 | TCTTTCAGGAGTACGCGAATG | 58.124 | 47.619 | 15.93 | 1.67 | 0.00 | 2.67 |
534 | 827 | 3.587797 | TTCTTTCAGGAGTACGCGAAT | 57.412 | 42.857 | 15.93 | 0.00 | 0.00 | 3.34 |
535 | 828 | 3.374220 | TTTCTTTCAGGAGTACGCGAA | 57.626 | 42.857 | 15.93 | 0.00 | 0.00 | 4.70 |
536 | 829 | 3.054878 | GTTTTCTTTCAGGAGTACGCGA | 58.945 | 45.455 | 15.93 | 0.00 | 0.00 | 5.87 |
537 | 830 | 3.057734 | AGTTTTCTTTCAGGAGTACGCG | 58.942 | 45.455 | 3.53 | 3.53 | 0.00 | 6.01 |
538 | 831 | 4.056050 | TCAGTTTTCTTTCAGGAGTACGC | 58.944 | 43.478 | 0.00 | 0.00 | 0.00 | 4.42 |
539 | 832 | 6.419771 | GTTTCAGTTTTCTTTCAGGAGTACG | 58.580 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
540 | 833 | 6.511282 | CGGTTTCAGTTTTCTTTCAGGAGTAC | 60.511 | 42.308 | 0.00 | 0.00 | 0.00 | 2.73 |
541 | 834 | 5.526111 | CGGTTTCAGTTTTCTTTCAGGAGTA | 59.474 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
542 | 835 | 4.335594 | CGGTTTCAGTTTTCTTTCAGGAGT | 59.664 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
543 | 836 | 4.261197 | CCGGTTTCAGTTTTCTTTCAGGAG | 60.261 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
544 | 837 | 3.630312 | CCGGTTTCAGTTTTCTTTCAGGA | 59.370 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
545 | 838 | 3.795488 | GCCGGTTTCAGTTTTCTTTCAGG | 60.795 | 47.826 | 1.90 | 0.00 | 0.00 | 3.86 |
546 | 839 | 3.372060 | GCCGGTTTCAGTTTTCTTTCAG | 58.628 | 45.455 | 1.90 | 0.00 | 0.00 | 3.02 |
547 | 840 | 2.223386 | CGCCGGTTTCAGTTTTCTTTCA | 60.223 | 45.455 | 1.90 | 0.00 | 0.00 | 2.69 |
548 | 841 | 2.223409 | ACGCCGGTTTCAGTTTTCTTTC | 60.223 | 45.455 | 1.90 | 0.00 | 0.00 | 2.62 |
549 | 842 | 1.746787 | ACGCCGGTTTCAGTTTTCTTT | 59.253 | 42.857 | 1.90 | 0.00 | 0.00 | 2.52 |
552 | 845 | 1.397567 | CGTACGCCGGTTTCAGTTTTC | 60.398 | 52.381 | 0.52 | 0.00 | 0.00 | 2.29 |
649 | 955 | 3.056322 | GGTGGTCATCTGTACCTACGTTT | 60.056 | 47.826 | 0.00 | 0.00 | 37.91 | 3.60 |
883 | 1195 | 1.676746 | CGTACGATTCAGGAGAGGGA | 58.323 | 55.000 | 10.44 | 0.00 | 0.00 | 4.20 |
925 | 1241 | 4.753877 | CGACAGTCCGCGCTCGAA | 62.754 | 66.667 | 5.56 | 0.00 | 38.10 | 3.71 |
989 | 1309 | 3.762992 | CGCGCATGTGTTCGACGT | 61.763 | 61.111 | 8.75 | 0.00 | 0.00 | 4.34 |
1270 | 1590 | 0.944311 | GAGTGGAACAGCGCGAAGAA | 60.944 | 55.000 | 12.10 | 0.00 | 41.80 | 2.52 |
1680 | 2003 | 2.114625 | ACCTCGACCACGACCTCA | 59.885 | 61.111 | 0.00 | 0.00 | 43.81 | 3.86 |
1728 | 2051 | 1.373435 | CAACAACACCCCGAGCCTA | 59.627 | 57.895 | 0.00 | 0.00 | 0.00 | 3.93 |
1779 | 2102 | 2.939103 | GAGGAAATGCTGCAAGTATCGT | 59.061 | 45.455 | 6.36 | 4.45 | 38.77 | 3.73 |
1780 | 2103 | 3.201290 | AGAGGAAATGCTGCAAGTATCG | 58.799 | 45.455 | 6.36 | 0.00 | 38.77 | 2.92 |
1808 | 2131 | 2.296692 | CTTCCGCAGCACATACACGC | 62.297 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1816 | 2139 | 1.351153 | GAAGTACTCTTCCGCAGCAC | 58.649 | 55.000 | 0.00 | 0.00 | 42.85 | 4.40 |
1817 | 2140 | 0.109272 | CGAAGTACTCTTCCGCAGCA | 60.109 | 55.000 | 0.00 | 0.00 | 45.02 | 4.41 |
1818 | 2141 | 0.109226 | ACGAAGTACTCTTCCGCAGC | 60.109 | 55.000 | 0.00 | 0.00 | 45.02 | 5.25 |
1819 | 2142 | 1.199327 | TCACGAAGTACTCTTCCGCAG | 59.801 | 52.381 | 0.00 | 0.00 | 45.02 | 5.18 |
1820 | 2143 | 1.241165 | TCACGAAGTACTCTTCCGCA | 58.759 | 50.000 | 0.00 | 0.00 | 45.02 | 5.69 |
1821 | 2144 | 2.095364 | TCTTCACGAAGTACTCTTCCGC | 60.095 | 50.000 | 6.68 | 0.00 | 45.02 | 5.54 |
1822 | 2145 | 3.826236 | TCTTCACGAAGTACTCTTCCG | 57.174 | 47.619 | 6.68 | 0.60 | 45.02 | 4.30 |
1823 | 2146 | 4.425520 | CCATCTTCACGAAGTACTCTTCC | 58.574 | 47.826 | 6.68 | 0.00 | 45.02 | 3.46 |
1824 | 2147 | 4.425520 | CCCATCTTCACGAAGTACTCTTC | 58.574 | 47.826 | 6.68 | 0.00 | 41.61 | 2.87 |
1825 | 2148 | 3.368531 | GCCCATCTTCACGAAGTACTCTT | 60.369 | 47.826 | 6.68 | 0.00 | 41.61 | 2.85 |
1826 | 2149 | 2.166664 | GCCCATCTTCACGAAGTACTCT | 59.833 | 50.000 | 6.68 | 0.00 | 41.61 | 3.24 |
1827 | 2150 | 2.166664 | AGCCCATCTTCACGAAGTACTC | 59.833 | 50.000 | 6.68 | 0.00 | 41.61 | 2.59 |
1828 | 2151 | 2.093973 | CAGCCCATCTTCACGAAGTACT | 60.094 | 50.000 | 6.68 | 0.00 | 41.61 | 2.73 |
1829 | 2152 | 2.271800 | CAGCCCATCTTCACGAAGTAC | 58.728 | 52.381 | 6.68 | 0.00 | 41.61 | 2.73 |
1830 | 2153 | 1.405526 | GCAGCCCATCTTCACGAAGTA | 60.406 | 52.381 | 6.68 | 0.00 | 41.61 | 2.24 |
1832 | 2155 | 0.392193 | AGCAGCCCATCTTCACGAAG | 60.392 | 55.000 | 0.08 | 0.08 | 39.71 | 3.79 |
1833 | 2156 | 0.674581 | CAGCAGCCCATCTTCACGAA | 60.675 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1834 | 2157 | 1.078918 | CAGCAGCCCATCTTCACGA | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
1835 | 2158 | 2.110967 | CCAGCAGCCCATCTTCACG | 61.111 | 63.158 | 0.00 | 0.00 | 0.00 | 4.35 |
1836 | 2159 | 2.413142 | GCCAGCAGCCCATCTTCAC | 61.413 | 63.158 | 0.00 | 0.00 | 34.35 | 3.18 |
1837 | 2160 | 2.044650 | GCCAGCAGCCCATCTTCA | 60.045 | 61.111 | 0.00 | 0.00 | 34.35 | 3.02 |
1850 | 2173 | 3.066380 | GCTAAAACAAAACCATGGCCAG | 58.934 | 45.455 | 13.05 | 0.00 | 0.00 | 4.85 |
1882 | 2646 | 3.120923 | GGTTACAACACGAACACGTATGG | 60.121 | 47.826 | 0.00 | 0.00 | 38.51 | 2.74 |
1956 | 4215 | 3.492383 | GTGATTGATCCTACGCTCACATG | 59.508 | 47.826 | 0.00 | 0.00 | 34.57 | 3.21 |
1964 | 4223 | 3.393800 | GGGTGATGTGATTGATCCTACG | 58.606 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1981 | 4240 | 1.248101 | GGGGTTGGATTTGTCGGGTG | 61.248 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
1982 | 4241 | 1.076014 | GGGGTTGGATTTGTCGGGT | 59.924 | 57.895 | 0.00 | 0.00 | 0.00 | 5.28 |
1983 | 4242 | 1.680989 | GGGGGTTGGATTTGTCGGG | 60.681 | 63.158 | 0.00 | 0.00 | 0.00 | 5.14 |
2003 | 4303 | 3.211045 | GACTAAGTGCAAAACAGGGTGA | 58.789 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
2005 | 4305 | 2.158871 | TCGACTAAGTGCAAAACAGGGT | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
2017 | 4317 | 3.567164 | TCTCGGTCAAAGTTCGACTAAGT | 59.433 | 43.478 | 0.00 | 0.00 | 33.73 | 2.24 |
2018 | 4318 | 3.913163 | GTCTCGGTCAAAGTTCGACTAAG | 59.087 | 47.826 | 0.00 | 0.00 | 33.73 | 2.18 |
2019 | 4319 | 3.316029 | TGTCTCGGTCAAAGTTCGACTAA | 59.684 | 43.478 | 0.00 | 0.00 | 33.73 | 2.24 |
2021 | 4321 | 1.679680 | TGTCTCGGTCAAAGTTCGACT | 59.320 | 47.619 | 0.00 | 0.00 | 33.73 | 4.18 |
2023 | 4323 | 2.875087 | TTGTCTCGGTCAAAGTTCGA | 57.125 | 45.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2024 | 4324 | 3.308866 | AGTTTTGTCTCGGTCAAAGTTCG | 59.691 | 43.478 | 0.00 | 0.00 | 36.40 | 3.95 |
2025 | 4325 | 4.260661 | GGAGTTTTGTCTCGGTCAAAGTTC | 60.261 | 45.833 | 0.00 | 0.00 | 36.40 | 3.01 |
2026 | 4326 | 3.626217 | GGAGTTTTGTCTCGGTCAAAGTT | 59.374 | 43.478 | 0.00 | 0.00 | 36.40 | 2.66 |
2027 | 4327 | 3.118371 | AGGAGTTTTGTCTCGGTCAAAGT | 60.118 | 43.478 | 0.00 | 0.00 | 36.40 | 2.66 |
2028 | 4328 | 3.467803 | AGGAGTTTTGTCTCGGTCAAAG | 58.532 | 45.455 | 0.00 | 0.00 | 36.40 | 2.77 |
2029 | 4329 | 3.553828 | AGGAGTTTTGTCTCGGTCAAA | 57.446 | 42.857 | 0.00 | 0.00 | 35.52 | 2.69 |
2030 | 4330 | 3.463944 | GAAGGAGTTTTGTCTCGGTCAA | 58.536 | 45.455 | 0.00 | 0.00 | 35.52 | 3.18 |
2031 | 4331 | 2.224209 | GGAAGGAGTTTTGTCTCGGTCA | 60.224 | 50.000 | 0.00 | 0.00 | 35.52 | 4.02 |
2032 | 4332 | 2.414806 | GGAAGGAGTTTTGTCTCGGTC | 58.585 | 52.381 | 0.00 | 0.00 | 35.52 | 4.79 |
2033 | 4333 | 1.071857 | GGGAAGGAGTTTTGTCTCGGT | 59.928 | 52.381 | 0.00 | 0.00 | 35.52 | 4.69 |
2034 | 4334 | 1.071699 | TGGGAAGGAGTTTTGTCTCGG | 59.928 | 52.381 | 0.00 | 0.00 | 35.52 | 4.63 |
2035 | 4335 | 2.143925 | GTGGGAAGGAGTTTTGTCTCG | 58.856 | 52.381 | 0.00 | 0.00 | 35.52 | 4.04 |
2036 | 4336 | 2.879026 | GTGTGGGAAGGAGTTTTGTCTC | 59.121 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2037 | 4337 | 2.509964 | AGTGTGGGAAGGAGTTTTGTCT | 59.490 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
2038 | 4338 | 2.932261 | AGTGTGGGAAGGAGTTTTGTC | 58.068 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
2039 | 4339 | 3.382083 | AAGTGTGGGAAGGAGTTTTGT | 57.618 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
2040 | 4340 | 3.699038 | TCAAAGTGTGGGAAGGAGTTTTG | 59.301 | 43.478 | 0.00 | 0.00 | 0.00 | 2.44 |
2041 | 4341 | 3.954258 | CTCAAAGTGTGGGAAGGAGTTTT | 59.046 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
2042 | 4342 | 3.555966 | CTCAAAGTGTGGGAAGGAGTTT | 58.444 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
2043 | 4343 | 2.749800 | GCTCAAAGTGTGGGAAGGAGTT | 60.750 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2044 | 4344 | 1.202818 | GCTCAAAGTGTGGGAAGGAGT | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
2045 | 4345 | 1.202806 | TGCTCAAAGTGTGGGAAGGAG | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
2046 | 4346 | 0.843309 | TGCTCAAAGTGTGGGAAGGA | 59.157 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2047 | 4347 | 1.691196 | TTGCTCAAAGTGTGGGAAGG | 58.309 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2048 | 4348 | 3.491447 | CCTTTTGCTCAAAGTGTGGGAAG | 60.491 | 47.826 | 7.81 | 0.00 | 40.51 | 3.46 |
2049 | 4349 | 2.430332 | CCTTTTGCTCAAAGTGTGGGAA | 59.570 | 45.455 | 7.81 | 0.00 | 40.51 | 3.97 |
2050 | 4350 | 2.031120 | CCTTTTGCTCAAAGTGTGGGA | 58.969 | 47.619 | 7.81 | 0.00 | 40.51 | 4.37 |
2051 | 4351 | 1.756538 | ACCTTTTGCTCAAAGTGTGGG | 59.243 | 47.619 | 7.81 | 0.00 | 40.51 | 4.61 |
2052 | 4352 | 2.166254 | ACACCTTTTGCTCAAAGTGTGG | 59.834 | 45.455 | 20.25 | 13.14 | 42.35 | 4.17 |
2053 | 4353 | 3.508744 | ACACCTTTTGCTCAAAGTGTG | 57.491 | 42.857 | 15.16 | 16.25 | 42.98 | 3.82 |
2054 | 4354 | 3.066760 | GCTACACCTTTTGCTCAAAGTGT | 59.933 | 43.478 | 18.09 | 18.09 | 40.51 | 3.55 |
2055 | 4355 | 3.316308 | AGCTACACCTTTTGCTCAAAGTG | 59.684 | 43.478 | 11.01 | 11.01 | 40.51 | 3.16 |
2056 | 4356 | 3.555966 | AGCTACACCTTTTGCTCAAAGT | 58.444 | 40.909 | 7.81 | 0.00 | 40.51 | 2.66 |
2057 | 4357 | 4.036734 | TGAAGCTACACCTTTTGCTCAAAG | 59.963 | 41.667 | 0.00 | 2.80 | 41.64 | 2.77 |
2058 | 4358 | 3.951037 | TGAAGCTACACCTTTTGCTCAAA | 59.049 | 39.130 | 0.00 | 0.00 | 34.38 | 2.69 |
2059 | 4359 | 3.550820 | TGAAGCTACACCTTTTGCTCAA | 58.449 | 40.909 | 0.00 | 0.00 | 34.38 | 3.02 |
2060 | 4360 | 3.141398 | CTGAAGCTACACCTTTTGCTCA | 58.859 | 45.455 | 0.00 | 0.00 | 34.38 | 4.26 |
2061 | 4361 | 3.142174 | ACTGAAGCTACACCTTTTGCTC | 58.858 | 45.455 | 0.00 | 0.00 | 34.38 | 4.26 |
2062 | 4362 | 3.214696 | ACTGAAGCTACACCTTTTGCT | 57.785 | 42.857 | 0.00 | 0.00 | 37.37 | 3.91 |
2063 | 4363 | 5.629079 | ATTACTGAAGCTACACCTTTTGC | 57.371 | 39.130 | 0.00 | 0.00 | 0.00 | 3.68 |
2064 | 4364 | 6.857964 | CACAATTACTGAAGCTACACCTTTTG | 59.142 | 38.462 | 0.00 | 0.00 | 0.00 | 2.44 |
2065 | 4365 | 6.546034 | ACACAATTACTGAAGCTACACCTTTT | 59.454 | 34.615 | 0.00 | 0.00 | 0.00 | 2.27 |
2066 | 4366 | 6.062095 | ACACAATTACTGAAGCTACACCTTT | 58.938 | 36.000 | 0.00 | 0.00 | 0.00 | 3.11 |
2067 | 4367 | 5.621193 | ACACAATTACTGAAGCTACACCTT | 58.379 | 37.500 | 0.00 | 0.00 | 0.00 | 3.50 |
2068 | 4368 | 5.228945 | ACACAATTACTGAAGCTACACCT | 57.771 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
2069 | 4369 | 5.334879 | CCAACACAATTACTGAAGCTACACC | 60.335 | 44.000 | 0.00 | 0.00 | 0.00 | 4.16 |
2070 | 4370 | 5.334879 | CCCAACACAATTACTGAAGCTACAC | 60.335 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2071 | 4371 | 4.759693 | CCCAACACAATTACTGAAGCTACA | 59.240 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
2072 | 4372 | 4.379499 | GCCCAACACAATTACTGAAGCTAC | 60.379 | 45.833 | 0.00 | 0.00 | 0.00 | 3.58 |
2073 | 4373 | 3.756434 | GCCCAACACAATTACTGAAGCTA | 59.244 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
2074 | 4374 | 2.558359 | GCCCAACACAATTACTGAAGCT | 59.442 | 45.455 | 0.00 | 0.00 | 0.00 | 3.74 |
2075 | 4375 | 2.295909 | TGCCCAACACAATTACTGAAGC | 59.704 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2076 | 4376 | 4.487948 | CATGCCCAACACAATTACTGAAG | 58.512 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
2081 | 4381 | 2.995258 | CAAGCATGCCCAACACAATTAC | 59.005 | 45.455 | 15.66 | 0.00 | 0.00 | 1.89 |
2082 | 4382 | 2.896044 | TCAAGCATGCCCAACACAATTA | 59.104 | 40.909 | 15.66 | 0.00 | 0.00 | 1.40 |
2091 | 4391 | 1.546923 | CTTGTGAATCAAGCATGCCCA | 59.453 | 47.619 | 15.66 | 0.00 | 45.37 | 5.36 |
2092 | 4392 | 2.288961 | CTTGTGAATCAAGCATGCCC | 57.711 | 50.000 | 15.66 | 0.00 | 45.37 | 5.36 |
2116 | 4417 | 6.867662 | ATTAATTATCCGCACAGAAAGGAG | 57.132 | 37.500 | 0.00 | 0.00 | 37.49 | 3.69 |
2123 | 4424 | 6.149308 | TGCTCCATTATTAATTATCCGCACAG | 59.851 | 38.462 | 0.00 | 0.00 | 0.00 | 3.66 |
2125 | 4426 | 6.149474 | ACTGCTCCATTATTAATTATCCGCAC | 59.851 | 38.462 | 0.00 | 0.00 | 0.00 | 5.34 |
2132 | 4433 | 9.639563 | TCCATCAAACTGCTCCATTATTAATTA | 57.360 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
2133 | 4434 | 8.537728 | TCCATCAAACTGCTCCATTATTAATT | 57.462 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
2134 | 4435 | 8.537728 | TTCCATCAAACTGCTCCATTATTAAT | 57.462 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
2135 | 4436 | 7.953005 | TTCCATCAAACTGCTCCATTATTAA | 57.047 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2164 | 4465 | 3.179830 | CGGAGGAAGTACGTTTGATGAG | 58.820 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2165 | 4466 | 2.673043 | GCGGAGGAAGTACGTTTGATGA | 60.673 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2169 | 4470 | 1.017701 | GGGCGGAGGAAGTACGTTTG | 61.018 | 60.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2170 | 4471 | 1.294459 | GGGCGGAGGAAGTACGTTT | 59.706 | 57.895 | 0.00 | 0.00 | 0.00 | 3.60 |
2171 | 4472 | 2.976356 | GGGCGGAGGAAGTACGTT | 59.024 | 61.111 | 0.00 | 0.00 | 0.00 | 3.99 |
2172 | 4473 | 3.446570 | CGGGCGGAGGAAGTACGT | 61.447 | 66.667 | 0.00 | 0.00 | 0.00 | 3.57 |
2173 | 4474 | 2.216750 | TTTCGGGCGGAGGAAGTACG | 62.217 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
2175 | 4476 | 0.906775 | ATTTTCGGGCGGAGGAAGTA | 59.093 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2176 | 4477 | 0.906775 | TATTTTCGGGCGGAGGAAGT | 59.093 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2177 | 4478 | 1.134491 | AGTATTTTCGGGCGGAGGAAG | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
2182 | 4483 | 3.823281 | TGATAAGTATTTTCGGGCGGA | 57.177 | 42.857 | 0.00 | 0.00 | 0.00 | 5.54 |
2184 | 4485 | 5.666969 | TTGATGATAAGTATTTTCGGGCG | 57.333 | 39.130 | 0.00 | 0.00 | 0.00 | 6.13 |
2185 | 4486 | 7.254852 | TGTTTTGATGATAAGTATTTTCGGGC | 58.745 | 34.615 | 0.00 | 0.00 | 0.00 | 6.13 |
2186 | 4487 | 9.632807 | TTTGTTTTGATGATAAGTATTTTCGGG | 57.367 | 29.630 | 0.00 | 0.00 | 0.00 | 5.14 |
2218 | 4519 | 9.575783 | GTCTCGACTTGAACTAAATAGATTTCT | 57.424 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
2219 | 4520 | 8.525071 | CGTCTCGACTTGAACTAAATAGATTTC | 58.475 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
2220 | 4521 | 7.488471 | CCGTCTCGACTTGAACTAAATAGATTT | 59.512 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
2221 | 4522 | 6.973474 | CCGTCTCGACTTGAACTAAATAGATT | 59.027 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
2222 | 4523 | 6.095160 | ACCGTCTCGACTTGAACTAAATAGAT | 59.905 | 38.462 | 0.00 | 0.00 | 0.00 | 1.98 |
2223 | 4524 | 5.413833 | ACCGTCTCGACTTGAACTAAATAGA | 59.586 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2224 | 4525 | 5.638783 | ACCGTCTCGACTTGAACTAAATAG | 58.361 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
2225 | 4526 | 5.181811 | TGACCGTCTCGACTTGAACTAAATA | 59.818 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2226 | 4527 | 4.022589 | TGACCGTCTCGACTTGAACTAAAT | 60.023 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
2227 | 4528 | 3.316029 | TGACCGTCTCGACTTGAACTAAA | 59.684 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
2228 | 4529 | 2.880268 | TGACCGTCTCGACTTGAACTAA | 59.120 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
2229 | 4530 | 2.497138 | TGACCGTCTCGACTTGAACTA | 58.503 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
2230 | 4531 | 1.315690 | TGACCGTCTCGACTTGAACT | 58.684 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2231 | 4532 | 2.129823 | TTGACCGTCTCGACTTGAAC | 57.870 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2232 | 4533 | 2.875087 | TTTGACCGTCTCGACTTGAA | 57.125 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2233 | 4534 | 2.295070 | TGATTTGACCGTCTCGACTTGA | 59.705 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
2355 | 4681 | 9.276590 | CCAGATGTGCTCATGAATAAATTAGTA | 57.723 | 33.333 | 5.89 | 0.00 | 34.06 | 1.82 |
2361 | 4687 | 4.271661 | TGCCAGATGTGCTCATGAATAAA | 58.728 | 39.130 | 5.89 | 0.00 | 34.06 | 1.40 |
2396 | 4722 | 7.040755 | CCTCCTATCTAATCTAGTCATATGGCG | 60.041 | 44.444 | 0.74 | 0.00 | 0.00 | 5.69 |
2457 | 4783 | 1.798223 | TGTCGAAATGCTTCTCCGTTG | 59.202 | 47.619 | 0.00 | 0.00 | 0.00 | 4.10 |
2504 | 4830 | 6.276847 | TGTTTTGCGAACCATCTTTGTTATT | 58.723 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2594 | 4922 | 3.739300 | TCTTGGAAGACGTCGAAAATGTC | 59.261 | 43.478 | 10.46 | 0.00 | 43.19 | 3.06 |
2710 | 5038 | 7.380536 | TGATTTTGCTTAGTGATTCTGCATTT | 58.619 | 30.769 | 0.00 | 0.00 | 33.50 | 2.32 |
2711 | 5039 | 6.927416 | TGATTTTGCTTAGTGATTCTGCATT | 58.073 | 32.000 | 0.00 | 0.00 | 33.50 | 3.56 |
2712 | 5040 | 6.519679 | TGATTTTGCTTAGTGATTCTGCAT | 57.480 | 33.333 | 0.00 | 0.00 | 33.50 | 3.96 |
2713 | 5041 | 5.963176 | TGATTTTGCTTAGTGATTCTGCA | 57.037 | 34.783 | 0.00 | 0.00 | 0.00 | 4.41 |
2727 | 5055 | 9.683069 | TTTCTTCAGAAGTTCTTATGATTTTGC | 57.317 | 29.630 | 10.09 | 0.00 | 35.21 | 3.68 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.