Multiple sequence alignment - TraesCS3B01G358300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G358300 chr3B 100.000 6878 0 0 1 6878 571140870 571147747 0.000000e+00 12702.0
1 TraesCS3B01G358300 chr3A 89.467 3076 234 46 807 3816 573976246 573979297 0.000000e+00 3803.0
2 TraesCS3B01G358300 chr3A 92.217 1105 73 12 5131 6227 573984900 573985999 0.000000e+00 1552.0
3 TraesCS3B01G358300 chr3A 88.582 1051 93 12 3808 4834 573979464 573980511 0.000000e+00 1251.0
4 TraesCS3B01G358300 chr3A 90.328 579 26 13 6311 6878 573989217 573989776 0.000000e+00 732.0
5 TraesCS3B01G358300 chr3A 90.698 215 13 3 4918 5128 573984582 573984793 5.250000e-71 279.0
6 TraesCS3B01G358300 chr3D 94.769 2447 99 8 2708 5128 435123378 435125821 0.000000e+00 3783.0
7 TraesCS3B01G358300 chr3D 93.615 1253 64 5 807 2054 435120704 435121945 0.000000e+00 1857.0
8 TraesCS3B01G358300 chr3D 91.595 1166 71 17 5123 6272 435125912 435127066 0.000000e+00 1585.0
9 TraesCS3B01G358300 chr3D 95.092 652 26 3 2064 2714 435122507 435123153 0.000000e+00 1022.0
10 TraesCS3B01G358300 chr3D 91.939 521 26 8 6374 6878 435127273 435127793 0.000000e+00 715.0
11 TraesCS3B01G358300 chr3D 89.451 237 22 3 353 587 435120240 435120475 5.220000e-76 296.0
12 TraesCS3B01G358300 chr3D 94.382 89 4 1 694 781 923116 923028 1.200000e-27 135.0
13 TraesCS3B01G358300 chr3D 93.182 44 3 0 6271 6314 435127135 435127178 1.600000e-06 65.8
14 TraesCS3B01G358300 chr1A 100.000 78 0 0 704 781 85040812 85040735 2.000000e-30 145.0
15 TraesCS3B01G358300 chrUn 98.734 79 1 0 703 781 67634455 67634377 2.590000e-29 141.0
16 TraesCS3B01G358300 chr5D 98.734 79 1 0 703 781 347656198 347656120 2.590000e-29 141.0
17 TraesCS3B01G358300 chr5D 98.734 79 1 0 703 781 502881711 502881633 2.590000e-29 141.0
18 TraesCS3B01G358300 chr5D 94.382 89 4 1 694 781 225253180 225253268 1.200000e-27 135.0
19 TraesCS3B01G358300 chr1D 98.734 79 1 0 703 781 135048039 135048117 2.590000e-29 141.0
20 TraesCS3B01G358300 chr7D 94.186 86 4 1 697 781 19976598 19976513 5.600000e-26 130.0
21 TraesCS3B01G358300 chr1B 86.777 121 9 7 697 812 513248503 513248385 2.010000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G358300 chr3B 571140870 571147747 6877 False 12702.000000 12702 100.000000 1 6878 1 chr3B.!!$F1 6877
1 TraesCS3B01G358300 chr3A 573976246 573980511 4265 False 2527.000000 3803 89.024500 807 4834 2 chr3A.!!$F1 4027
2 TraesCS3B01G358300 chr3A 573984582 573989776 5194 False 854.333333 1552 91.081000 4918 6878 3 chr3A.!!$F2 1960
3 TraesCS3B01G358300 chr3D 435120240 435127793 7553 False 1331.971429 3783 92.806143 353 6878 7 chr3D.!!$F1 6525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
228 229 0.034477 ATCACCATTTGTCCCCCGTC 60.034 55.0 0.0 0.0 0.00 4.79 F
783 813 0.104144 TTTTGGGACAGAGGGAGGGA 60.104 55.0 0.0 0.0 42.39 4.20 F
1440 1557 0.395312 TCAAAAGGGTCCGTGGTCTC 59.605 55.0 0.0 0.0 0.00 3.36 F
1441 1558 0.605589 CAAAAGGGTCCGTGGTCTCC 60.606 60.0 0.0 0.0 0.00 3.71 F
2511 3207 0.596577 TTCTTCGTGACGGGTCTCAG 59.403 55.0 4.7 0.0 0.00 3.35 F
4031 5161 0.891373 TGCTCTACCTCTGTGCTCAC 59.109 55.0 0.0 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1644 1771 0.178975 ACGCCCCTCAAAATGTGGAA 60.179 50.0 0.21 0.0 33.04 3.53 R
1777 1919 0.451783 CTTAACCTGCGATGCAACCC 59.548 55.0 0.00 0.0 38.41 4.11 R
2502 3198 0.613777 AGGCCTTTTACTGAGACCCG 59.386 55.0 0.00 0.0 0.00 5.28 R
3185 4131 0.741927 CGATGTGTGCAGCAGGATGA 60.742 55.0 0.00 0.0 39.69 2.92 R
4070 5221 1.039785 CCTGCCATCGAGACTGGAGA 61.040 60.0 7.74 0.0 35.70 3.71 R
5986 7247 0.249398 AGAGAGCCGCCGTACAAAAT 59.751 50.0 0.00 0.0 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.875080 CGTCACCAAACCGAATTCTC 57.125 50.000 3.52 0.00 0.00 2.87
20 21 1.463444 CGTCACCAAACCGAATTCTCC 59.537 52.381 3.52 0.00 0.00 3.71
21 22 2.500229 GTCACCAAACCGAATTCTCCA 58.500 47.619 3.52 0.00 0.00 3.86
22 23 3.081804 GTCACCAAACCGAATTCTCCAT 58.918 45.455 3.52 0.00 0.00 3.41
23 24 3.127030 GTCACCAAACCGAATTCTCCATC 59.873 47.826 3.52 0.00 0.00 3.51
24 25 3.081061 CACCAAACCGAATTCTCCATCA 58.919 45.455 3.52 0.00 0.00 3.07
25 26 3.081804 ACCAAACCGAATTCTCCATCAC 58.918 45.455 3.52 0.00 0.00 3.06
26 27 2.095853 CCAAACCGAATTCTCCATCACG 59.904 50.000 3.52 0.00 0.00 4.35
27 28 2.742053 CAAACCGAATTCTCCATCACGT 59.258 45.455 3.52 0.00 0.00 4.49
28 29 2.295253 ACCGAATTCTCCATCACGTC 57.705 50.000 3.52 0.00 0.00 4.34
29 30 1.200483 CCGAATTCTCCATCACGTCG 58.800 55.000 3.52 0.00 0.00 5.12
30 31 1.200483 CGAATTCTCCATCACGTCGG 58.800 55.000 3.52 0.00 0.00 4.79
31 32 1.571919 GAATTCTCCATCACGTCGGG 58.428 55.000 0.00 0.00 0.00 5.14
32 33 0.902531 AATTCTCCATCACGTCGGGT 59.097 50.000 0.00 0.00 0.00 5.28
33 34 0.902531 ATTCTCCATCACGTCGGGTT 59.097 50.000 0.00 0.00 0.00 4.11
34 35 0.682852 TTCTCCATCACGTCGGGTTT 59.317 50.000 0.00 0.00 0.00 3.27
35 36 1.548081 TCTCCATCACGTCGGGTTTA 58.452 50.000 0.00 0.00 0.00 2.01
36 37 1.475280 TCTCCATCACGTCGGGTTTAG 59.525 52.381 0.00 0.00 0.00 1.85
37 38 0.533491 TCCATCACGTCGGGTTTAGG 59.467 55.000 0.00 0.00 0.00 2.69
38 39 0.248289 CCATCACGTCGGGTTTAGGT 59.752 55.000 0.00 0.00 0.00 3.08
39 40 1.477700 CCATCACGTCGGGTTTAGGTA 59.522 52.381 0.00 0.00 0.00 3.08
40 41 2.101917 CCATCACGTCGGGTTTAGGTAT 59.898 50.000 0.00 0.00 0.00 2.73
41 42 3.378339 CATCACGTCGGGTTTAGGTATC 58.622 50.000 0.00 0.00 0.00 2.24
42 43 1.750778 TCACGTCGGGTTTAGGTATCC 59.249 52.381 0.00 0.00 0.00 2.59
43 44 1.114627 ACGTCGGGTTTAGGTATCCC 58.885 55.000 0.00 0.00 37.98 3.85
44 45 0.390492 CGTCGGGTTTAGGTATCCCC 59.610 60.000 0.00 0.00 38.09 4.81
45 46 0.761187 GTCGGGTTTAGGTATCCCCC 59.239 60.000 0.00 0.00 38.09 5.40
47 48 3.245732 GGGTTTAGGTATCCCCCGA 57.754 57.895 0.00 0.00 35.52 5.14
48 49 1.738474 GGGTTTAGGTATCCCCCGAT 58.262 55.000 0.00 0.00 35.52 4.18
49 50 1.627329 GGGTTTAGGTATCCCCCGATC 59.373 57.143 0.00 0.00 35.52 3.69
50 51 2.617658 GGTTTAGGTATCCCCCGATCT 58.382 52.381 0.00 0.00 0.00 2.75
51 52 2.302157 GGTTTAGGTATCCCCCGATCTG 59.698 54.545 0.00 0.00 0.00 2.90
52 53 3.236896 GTTTAGGTATCCCCCGATCTGA 58.763 50.000 0.00 0.00 0.00 3.27
53 54 3.838903 GTTTAGGTATCCCCCGATCTGAT 59.161 47.826 0.00 0.00 0.00 2.90
54 55 2.239681 AGGTATCCCCCGATCTGATC 57.760 55.000 7.60 7.60 0.00 2.92
55 56 1.196012 GGTATCCCCCGATCTGATCC 58.804 60.000 11.84 0.00 0.00 3.36
56 57 1.552486 GGTATCCCCCGATCTGATCCA 60.552 57.143 11.84 0.00 0.00 3.41
57 58 1.827969 GTATCCCCCGATCTGATCCAG 59.172 57.143 11.84 4.01 0.00 3.86
58 59 0.489117 ATCCCCCGATCTGATCCAGA 59.511 55.000 11.84 0.00 44.99 3.86
65 66 1.970639 ATCTGATCCAGATCCGCCG 59.029 57.895 5.22 0.00 46.83 6.46
66 67 0.540597 ATCTGATCCAGATCCGCCGA 60.541 55.000 5.22 0.00 46.83 5.54
67 68 0.755327 TCTGATCCAGATCCGCCGAA 60.755 55.000 5.22 0.00 35.39 4.30
68 69 0.319383 CTGATCCAGATCCGCCGAAG 60.319 60.000 5.22 0.00 37.02 3.79
69 70 1.666234 GATCCAGATCCGCCGAAGC 60.666 63.158 0.00 0.00 31.76 3.86
82 83 2.668550 GAAGCGGCCGAACCACTT 60.669 61.111 33.48 22.25 43.71 3.16
83 84 2.966309 GAAGCGGCCGAACCACTTG 61.966 63.158 33.48 0.00 41.02 3.16
84 85 3.767630 AAGCGGCCGAACCACTTGT 62.768 57.895 33.48 0.00 39.42 3.16
85 86 3.723348 GCGGCCGAACCACTTGTC 61.723 66.667 33.48 2.06 39.03 3.18
86 87 2.030562 CGGCCGAACCACTTGTCT 59.969 61.111 24.07 0.00 39.03 3.41
87 88 2.027625 CGGCCGAACCACTTGTCTC 61.028 63.158 24.07 0.00 39.03 3.36
88 89 1.671379 GGCCGAACCACTTGTCTCC 60.671 63.158 0.00 0.00 38.86 3.71
89 90 2.027625 GCCGAACCACTTGTCTCCG 61.028 63.158 0.00 0.00 0.00 4.63
90 91 1.663739 CCGAACCACTTGTCTCCGA 59.336 57.895 0.00 0.00 0.00 4.55
91 92 0.246635 CCGAACCACTTGTCTCCGAT 59.753 55.000 0.00 0.00 0.00 4.18
92 93 1.630148 CGAACCACTTGTCTCCGATC 58.370 55.000 0.00 0.00 0.00 3.69
93 94 1.630148 GAACCACTTGTCTCCGATCG 58.370 55.000 8.51 8.51 0.00 3.69
94 95 0.389948 AACCACTTGTCTCCGATCGC 60.390 55.000 10.32 0.00 0.00 4.58
95 96 1.874019 CCACTTGTCTCCGATCGCG 60.874 63.158 10.32 0.00 37.24 5.87
110 111 2.188469 GCGGTGGCGATCCCTTTA 59.812 61.111 0.00 0.00 0.00 1.85
111 112 1.887707 GCGGTGGCGATCCCTTTAG 60.888 63.158 0.00 0.00 0.00 1.85
112 113 1.520666 CGGTGGCGATCCCTTTAGT 59.479 57.895 0.00 0.00 0.00 2.24
113 114 0.810031 CGGTGGCGATCCCTTTAGTG 60.810 60.000 0.00 0.00 0.00 2.74
114 115 1.095807 GGTGGCGATCCCTTTAGTGC 61.096 60.000 0.00 0.00 0.00 4.40
115 116 1.095807 GTGGCGATCCCTTTAGTGCC 61.096 60.000 0.00 0.00 42.76 5.01
116 117 1.887707 GGCGATCCCTTTAGTGCCG 60.888 63.158 0.00 0.00 32.14 5.69
117 118 2.534903 GCGATCCCTTTAGTGCCGC 61.535 63.158 0.00 0.00 0.00 6.53
118 119 1.887707 CGATCCCTTTAGTGCCGCC 60.888 63.158 0.00 0.00 0.00 6.13
119 120 1.887707 GATCCCTTTAGTGCCGCCG 60.888 63.158 0.00 0.00 0.00 6.46
120 121 3.400599 ATCCCTTTAGTGCCGCCGG 62.401 63.158 0.00 0.00 0.00 6.13
137 138 4.819761 GCGGCGACCTCAGATGCA 62.820 66.667 12.98 0.00 0.00 3.96
138 139 2.887568 CGGCGACCTCAGATGCAC 60.888 66.667 0.00 0.00 0.00 4.57
139 140 2.512515 GGCGACCTCAGATGCACC 60.513 66.667 0.00 0.00 0.00 5.01
140 141 2.265739 GCGACCTCAGATGCACCA 59.734 61.111 0.00 0.00 0.00 4.17
141 142 2.103042 GCGACCTCAGATGCACCAC 61.103 63.158 0.00 0.00 0.00 4.16
142 143 1.293179 CGACCTCAGATGCACCACA 59.707 57.895 0.00 0.00 0.00 4.17
143 144 0.320683 CGACCTCAGATGCACCACAA 60.321 55.000 0.00 0.00 0.00 3.33
144 145 1.446907 GACCTCAGATGCACCACAAG 58.553 55.000 0.00 0.00 0.00 3.16
145 146 1.002430 GACCTCAGATGCACCACAAGA 59.998 52.381 0.00 0.00 0.00 3.02
146 147 1.002888 ACCTCAGATGCACCACAAGAG 59.997 52.381 0.00 0.00 0.00 2.85
147 148 1.678123 CCTCAGATGCACCACAAGAGG 60.678 57.143 0.00 1.80 38.63 3.69
148 149 1.277273 CTCAGATGCACCACAAGAGGA 59.723 52.381 0.00 0.00 0.00 3.71
149 150 1.277273 TCAGATGCACCACAAGAGGAG 59.723 52.381 0.00 0.00 0.00 3.69
150 151 0.617413 AGATGCACCACAAGAGGAGG 59.383 55.000 0.00 0.00 0.00 4.30
151 152 0.326264 GATGCACCACAAGAGGAGGT 59.674 55.000 0.00 0.00 35.65 3.85
152 153 0.773644 ATGCACCACAAGAGGAGGTT 59.226 50.000 0.00 0.00 32.15 3.50
153 154 0.108585 TGCACCACAAGAGGAGGTTC 59.891 55.000 0.00 0.00 32.15 3.62
154 155 0.606673 GCACCACAAGAGGAGGTTCC 60.607 60.000 0.00 0.00 36.58 3.62
155 156 0.320771 CACCACAAGAGGAGGTTCCG 60.321 60.000 0.00 0.00 42.75 4.30
156 157 1.296715 CCACAAGAGGAGGTTCCGG 59.703 63.158 0.00 0.00 42.75 5.14
157 158 1.481056 CCACAAGAGGAGGTTCCGGT 61.481 60.000 0.00 0.00 42.75 5.28
158 159 0.320771 CACAAGAGGAGGTTCCGGTG 60.321 60.000 0.00 0.00 42.75 4.94
159 160 1.296715 CAAGAGGAGGTTCCGGTGG 59.703 63.158 0.00 0.00 42.75 4.61
160 161 1.157751 AAGAGGAGGTTCCGGTGGA 59.842 57.895 0.00 0.00 42.75 4.02
161 162 0.905337 AAGAGGAGGTTCCGGTGGAG 60.905 60.000 0.00 0.00 42.75 3.86
162 163 2.284699 AGGAGGTTCCGGTGGAGG 60.285 66.667 0.00 0.00 42.75 4.30
163 164 4.097361 GGAGGTTCCGGTGGAGGC 62.097 72.222 0.00 0.00 31.21 4.70
164 165 4.452733 GAGGTTCCGGTGGAGGCG 62.453 72.222 0.00 0.00 31.21 5.52
166 167 4.754667 GGTTCCGGTGGAGGCGAC 62.755 72.222 0.00 0.00 31.21 5.19
167 168 3.998672 GTTCCGGTGGAGGCGACA 61.999 66.667 0.00 0.00 31.21 4.35
168 169 3.691342 TTCCGGTGGAGGCGACAG 61.691 66.667 0.00 0.00 31.21 3.51
210 211 3.790437 CTCAGCGCCCCTCACCAT 61.790 66.667 2.29 0.00 0.00 3.55
211 212 3.746949 CTCAGCGCCCCTCACCATC 62.747 68.421 2.29 0.00 0.00 3.51
212 213 4.100084 CAGCGCCCCTCACCATCA 62.100 66.667 2.29 0.00 0.00 3.07
213 214 4.101448 AGCGCCCCTCACCATCAC 62.101 66.667 2.29 0.00 0.00 3.06
215 216 3.716195 CGCCCCTCACCATCACCA 61.716 66.667 0.00 0.00 0.00 4.17
216 217 3.010144 GCCCCTCACCATCACCAT 58.990 61.111 0.00 0.00 0.00 3.55
217 218 1.307647 GCCCCTCACCATCACCATT 59.692 57.895 0.00 0.00 0.00 3.16
218 219 0.324645 GCCCCTCACCATCACCATTT 60.325 55.000 0.00 0.00 0.00 2.32
219 220 1.477553 CCCCTCACCATCACCATTTG 58.522 55.000 0.00 0.00 0.00 2.32
220 221 1.272648 CCCCTCACCATCACCATTTGT 60.273 52.381 0.00 0.00 0.00 2.83
221 222 2.094675 CCCTCACCATCACCATTTGTC 58.905 52.381 0.00 0.00 0.00 3.18
222 223 2.094675 CCTCACCATCACCATTTGTCC 58.905 52.381 0.00 0.00 0.00 4.02
223 224 2.094675 CTCACCATCACCATTTGTCCC 58.905 52.381 0.00 0.00 0.00 4.46
224 225 1.185315 CACCATCACCATTTGTCCCC 58.815 55.000 0.00 0.00 0.00 4.81
225 226 0.041090 ACCATCACCATTTGTCCCCC 59.959 55.000 0.00 0.00 0.00 5.40
226 227 1.037030 CCATCACCATTTGTCCCCCG 61.037 60.000 0.00 0.00 0.00 5.73
227 228 0.323360 CATCACCATTTGTCCCCCGT 60.323 55.000 0.00 0.00 0.00 5.28
228 229 0.034477 ATCACCATTTGTCCCCCGTC 60.034 55.000 0.00 0.00 0.00 4.79
229 230 2.038269 CACCATTTGTCCCCCGTCG 61.038 63.158 0.00 0.00 0.00 5.12
230 231 2.349755 CCATTTGTCCCCCGTCGT 59.650 61.111 0.00 0.00 0.00 4.34
231 232 1.193462 ACCATTTGTCCCCCGTCGTA 61.193 55.000 0.00 0.00 0.00 3.43
232 233 0.741927 CCATTTGTCCCCCGTCGTAC 60.742 60.000 0.00 0.00 0.00 3.67
233 234 0.248289 CATTTGTCCCCCGTCGTACT 59.752 55.000 0.00 0.00 0.00 2.73
234 235 0.533951 ATTTGTCCCCCGTCGTACTC 59.466 55.000 0.00 0.00 0.00 2.59
235 236 1.535204 TTTGTCCCCCGTCGTACTCC 61.535 60.000 0.00 0.00 0.00 3.85
236 237 3.143515 GTCCCCCGTCGTACTCCC 61.144 72.222 0.00 0.00 0.00 4.30
237 238 3.341629 TCCCCCGTCGTACTCCCT 61.342 66.667 0.00 0.00 0.00 4.20
238 239 2.832201 CCCCCGTCGTACTCCCTC 60.832 72.222 0.00 0.00 0.00 4.30
239 240 3.207669 CCCCGTCGTACTCCCTCG 61.208 72.222 0.00 0.00 0.00 4.63
240 241 2.437359 CCCGTCGTACTCCCTCGT 60.437 66.667 0.00 0.00 0.00 4.18
241 242 2.467826 CCCGTCGTACTCCCTCGTC 61.468 68.421 0.00 0.00 0.00 4.20
242 243 1.742880 CCGTCGTACTCCCTCGTCA 60.743 63.158 0.00 0.00 0.00 4.35
243 244 1.423056 CGTCGTACTCCCTCGTCAC 59.577 63.158 0.00 0.00 0.00 3.67
244 245 1.423056 GTCGTACTCCCTCGTCACG 59.577 63.158 0.00 0.00 0.00 4.35
245 246 1.004560 TCGTACTCCCTCGTCACGT 60.005 57.895 0.00 0.00 34.39 4.49
246 247 0.603707 TCGTACTCCCTCGTCACGTT 60.604 55.000 0.00 0.00 34.39 3.99
247 248 0.179205 CGTACTCCCTCGTCACGTTC 60.179 60.000 0.00 0.00 0.00 3.95
248 249 0.179205 GTACTCCCTCGTCACGTTCG 60.179 60.000 0.00 3.87 0.00 3.95
249 250 1.300971 TACTCCCTCGTCACGTTCGG 61.301 60.000 0.00 0.00 0.00 4.30
250 251 2.281692 TCCCTCGTCACGTTCGGA 60.282 61.111 0.00 0.00 0.00 4.55
251 252 1.654954 CTCCCTCGTCACGTTCGGAT 61.655 60.000 0.00 0.00 0.00 4.18
252 253 1.516386 CCCTCGTCACGTTCGGATG 60.516 63.158 0.00 0.00 0.00 3.51
253 254 1.516386 CCTCGTCACGTTCGGATGG 60.516 63.158 0.00 6.60 0.00 3.51
254 255 2.126228 TCGTCACGTTCGGATGGC 60.126 61.111 0.00 0.00 0.00 4.40
255 256 2.126071 CGTCACGTTCGGATGGCT 60.126 61.111 0.00 0.00 0.00 4.75
256 257 2.158959 CGTCACGTTCGGATGGCTC 61.159 63.158 0.00 0.00 0.00 4.70
257 258 2.158959 GTCACGTTCGGATGGCTCG 61.159 63.158 0.00 0.00 0.00 5.03
258 259 2.126071 CACGTTCGGATGGCTCGT 60.126 61.111 0.00 0.00 35.12 4.18
259 260 1.138036 CACGTTCGGATGGCTCGTA 59.862 57.895 0.00 0.00 33.49 3.43
260 261 0.866061 CACGTTCGGATGGCTCGTAG 60.866 60.000 0.00 0.00 33.49 3.51
261 262 1.310933 ACGTTCGGATGGCTCGTAGT 61.311 55.000 0.00 0.00 33.04 2.73
262 263 0.866061 CGTTCGGATGGCTCGTAGTG 60.866 60.000 0.00 0.00 0.00 2.74
263 264 0.527817 GTTCGGATGGCTCGTAGTGG 60.528 60.000 0.00 0.00 0.00 4.00
264 265 0.968901 TTCGGATGGCTCGTAGTGGT 60.969 55.000 0.00 0.00 0.00 4.16
265 266 0.107066 TCGGATGGCTCGTAGTGGTA 60.107 55.000 0.00 0.00 0.00 3.25
266 267 0.742505 CGGATGGCTCGTAGTGGTAA 59.257 55.000 0.00 0.00 0.00 2.85
267 268 1.535437 CGGATGGCTCGTAGTGGTAAC 60.535 57.143 0.00 0.00 0.00 2.50
285 286 7.026631 TGGTAACATTTTCTTCACTGTCAAG 57.973 36.000 0.00 0.00 46.17 3.02
286 287 6.601613 TGGTAACATTTTCTTCACTGTCAAGT 59.398 34.615 0.00 0.00 46.17 3.16
287 288 7.122055 TGGTAACATTTTCTTCACTGTCAAGTT 59.878 33.333 0.00 0.00 46.17 2.66
288 289 8.617809 GGTAACATTTTCTTCACTGTCAAGTTA 58.382 33.333 0.00 0.00 32.98 2.24
289 290 9.651718 GTAACATTTTCTTCACTGTCAAGTTAG 57.348 33.333 0.00 0.00 32.98 2.34
290 291 7.264373 ACATTTTCTTCACTGTCAAGTTAGG 57.736 36.000 0.00 0.00 32.98 2.69
291 292 5.751243 TTTTCTTCACTGTCAAGTTAGGC 57.249 39.130 0.00 0.00 32.98 3.93
292 293 4.689612 TTCTTCACTGTCAAGTTAGGCT 57.310 40.909 0.00 0.00 32.98 4.58
293 294 5.801531 TTCTTCACTGTCAAGTTAGGCTA 57.198 39.130 0.00 0.00 32.98 3.93
294 295 5.801531 TCTTCACTGTCAAGTTAGGCTAA 57.198 39.130 2.04 2.04 32.98 3.09
295 296 6.169557 TCTTCACTGTCAAGTTAGGCTAAA 57.830 37.500 8.86 0.00 32.98 1.85
296 297 6.588204 TCTTCACTGTCAAGTTAGGCTAAAA 58.412 36.000 8.86 0.00 32.98 1.52
297 298 6.482308 TCTTCACTGTCAAGTTAGGCTAAAAC 59.518 38.462 8.86 0.00 32.98 2.43
298 299 4.748102 TCACTGTCAAGTTAGGCTAAAACG 59.252 41.667 8.86 0.26 32.98 3.60
299 300 4.510340 CACTGTCAAGTTAGGCTAAAACGT 59.490 41.667 8.86 0.00 32.98 3.99
300 301 4.748600 ACTGTCAAGTTAGGCTAAAACGTC 59.251 41.667 8.86 0.00 30.14 4.34
301 302 4.952460 TGTCAAGTTAGGCTAAAACGTCT 58.048 39.130 8.86 0.00 32.00 4.18
302 303 4.748102 TGTCAAGTTAGGCTAAAACGTCTG 59.252 41.667 8.86 1.76 32.00 3.51
303 304 4.986659 GTCAAGTTAGGCTAAAACGTCTGA 59.013 41.667 8.86 3.97 32.00 3.27
304 305 5.638234 GTCAAGTTAGGCTAAAACGTCTGAT 59.362 40.000 8.86 0.00 32.00 2.90
305 306 5.637810 TCAAGTTAGGCTAAAACGTCTGATG 59.362 40.000 8.86 0.00 32.00 3.07
306 307 4.504858 AGTTAGGCTAAAACGTCTGATGG 58.495 43.478 8.86 0.00 32.00 3.51
307 308 1.739067 AGGCTAAAACGTCTGATGGC 58.261 50.000 1.43 0.00 0.00 4.40
308 309 1.003118 AGGCTAAAACGTCTGATGGCA 59.997 47.619 1.43 0.00 0.00 4.92
309 310 1.810151 GGCTAAAACGTCTGATGGCAA 59.190 47.619 1.43 0.00 0.00 4.52
310 311 2.423538 GGCTAAAACGTCTGATGGCAAT 59.576 45.455 1.43 0.00 0.00 3.56
311 312 3.119495 GGCTAAAACGTCTGATGGCAATT 60.119 43.478 1.43 0.00 0.00 2.32
312 313 4.098416 GCTAAAACGTCTGATGGCAATTC 58.902 43.478 1.43 0.00 0.00 2.17
313 314 4.379394 GCTAAAACGTCTGATGGCAATTCA 60.379 41.667 1.43 0.00 0.00 2.57
314 315 4.789012 AAAACGTCTGATGGCAATTCAT 57.211 36.364 1.43 0.00 0.00 2.57
315 316 4.361451 AAACGTCTGATGGCAATTCATC 57.639 40.909 1.43 1.13 42.72 2.92
316 317 1.935873 ACGTCTGATGGCAATTCATCG 59.064 47.619 1.43 2.99 44.68 3.84
317 318 1.935873 CGTCTGATGGCAATTCATCGT 59.064 47.619 0.00 0.00 44.68 3.73
318 319 3.123050 CGTCTGATGGCAATTCATCGTA 58.877 45.455 0.00 0.00 44.68 3.43
319 320 3.060272 CGTCTGATGGCAATTCATCGTAC 60.060 47.826 0.00 3.46 44.68 3.67
320 321 4.122776 GTCTGATGGCAATTCATCGTACT 58.877 43.478 0.00 0.00 44.68 2.73
321 322 5.289595 GTCTGATGGCAATTCATCGTACTA 58.710 41.667 0.00 0.00 44.68 1.82
322 323 5.403766 GTCTGATGGCAATTCATCGTACTAG 59.596 44.000 0.00 0.00 44.68 2.57
323 324 5.301805 TCTGATGGCAATTCATCGTACTAGA 59.698 40.000 0.00 0.00 44.68 2.43
324 325 5.912892 TGATGGCAATTCATCGTACTAGAA 58.087 37.500 0.00 0.00 44.68 2.10
325 326 5.985530 TGATGGCAATTCATCGTACTAGAAG 59.014 40.000 0.00 0.00 44.68 2.85
326 327 4.119862 TGGCAATTCATCGTACTAGAAGC 58.880 43.478 0.00 0.00 0.00 3.86
327 328 3.495001 GGCAATTCATCGTACTAGAAGCC 59.505 47.826 0.00 0.00 0.00 4.35
328 329 4.119862 GCAATTCATCGTACTAGAAGCCA 58.880 43.478 0.00 0.00 0.00 4.75
329 330 4.752101 GCAATTCATCGTACTAGAAGCCAT 59.248 41.667 0.00 0.00 0.00 4.40
330 331 5.926542 GCAATTCATCGTACTAGAAGCCATA 59.073 40.000 0.00 0.00 0.00 2.74
331 332 6.128795 GCAATTCATCGTACTAGAAGCCATAC 60.129 42.308 0.00 0.00 0.00 2.39
332 333 6.650427 ATTCATCGTACTAGAAGCCATACA 57.350 37.500 0.00 0.00 0.00 2.29
333 334 6.650427 TTCATCGTACTAGAAGCCATACAT 57.350 37.500 0.00 0.00 0.00 2.29
334 335 6.013842 TCATCGTACTAGAAGCCATACATG 57.986 41.667 0.00 0.00 0.00 3.21
371 372 3.489731 ATGACAAGCATGCCGTCG 58.510 55.556 24.77 11.28 35.42 5.12
380 381 1.745115 CATGCCGTCGGGACATGTT 60.745 57.895 18.55 0.00 40.21 2.71
388 389 3.496884 CCGTCGGGACATGTTTAATATGG 59.503 47.826 2.34 0.00 34.06 2.74
420 421 1.258445 AAGCTCTCGTCACGGGGAAT 61.258 55.000 0.00 0.00 0.00 3.01
421 422 1.519455 GCTCTCGTCACGGGGAATG 60.519 63.158 0.00 0.00 0.00 2.67
424 425 1.375396 CTCGTCACGGGGAATGCAA 60.375 57.895 0.00 0.00 0.00 4.08
451 453 6.203915 GGTGAAATGGTTTTGTAATTTGGACC 59.796 38.462 0.00 0.00 0.00 4.46
464 466 0.464735 TTGGACCCACGGTTCACAAG 60.465 55.000 0.00 0.00 41.52 3.16
470 472 1.810151 CCCACGGTTCACAAGGTATTG 59.190 52.381 0.00 0.00 42.46 1.90
473 475 2.156891 CACGGTTCACAAGGTATTGTCG 59.843 50.000 0.00 0.00 46.90 4.35
474 476 2.224113 ACGGTTCACAAGGTATTGTCGT 60.224 45.455 0.00 1.30 46.90 4.34
480 482 6.854381 GGTTCACAAGGTATTGTCGTTTAAAG 59.146 38.462 0.00 0.00 46.90 1.85
536 538 6.643770 TCCATACGTCTCAAACTAGTGAAAAC 59.356 38.462 0.00 0.00 0.00 2.43
537 539 6.128634 CCATACGTCTCAAACTAGTGAAAACC 60.129 42.308 0.00 0.00 0.00 3.27
539 541 3.497262 CGTCTCAAACTAGTGAAAACCCC 59.503 47.826 0.00 0.00 0.00 4.95
545 548 5.534654 TCAAACTAGTGAAAACCCCATCAAG 59.465 40.000 0.00 0.00 0.00 3.02
563 566 4.574892 TCAAGACTTCGTGATGGCAATAA 58.425 39.130 0.00 0.00 29.71 1.40
578 581 3.119388 GGCAATAAGTGACACACATGCAT 60.119 43.478 20.02 0.00 36.74 3.96
579 582 4.487948 GCAATAAGTGACACACATGCATT 58.512 39.130 8.59 0.00 36.74 3.56
601 628 1.532007 TGCCAACGTAAGCCTTTAACG 59.468 47.619 7.21 0.00 45.62 3.18
642 672 9.038072 TCCTTTAATAACTTATTTTTGTCCCCC 57.962 33.333 0.00 0.00 0.00 5.40
643 673 7.977293 CCTTTAATAACTTATTTTTGTCCCCCG 59.023 37.037 0.00 0.00 0.00 5.73
644 674 4.994907 ATAACTTATTTTTGTCCCCCGC 57.005 40.909 0.00 0.00 0.00 6.13
645 675 2.296073 ACTTATTTTTGTCCCCCGCA 57.704 45.000 0.00 0.00 0.00 5.69
646 676 2.599677 ACTTATTTTTGTCCCCCGCAA 58.400 42.857 0.00 0.00 0.00 4.85
647 677 2.966516 ACTTATTTTTGTCCCCCGCAAA 59.033 40.909 0.00 0.00 34.47 3.68
648 678 3.006430 ACTTATTTTTGTCCCCCGCAAAG 59.994 43.478 0.00 0.00 37.18 2.77
649 679 1.710816 ATTTTTGTCCCCCGCAAAGA 58.289 45.000 0.00 0.00 37.18 2.52
650 680 1.486211 TTTTTGTCCCCCGCAAAGAA 58.514 45.000 0.00 0.00 37.18 2.52
651 681 1.486211 TTTTGTCCCCCGCAAAGAAA 58.514 45.000 0.00 0.00 37.18 2.52
652 682 1.486211 TTTGTCCCCCGCAAAGAAAA 58.514 45.000 0.00 0.00 32.75 2.29
653 683 1.486211 TTGTCCCCCGCAAAGAAAAA 58.514 45.000 0.00 0.00 0.00 1.94
654 684 0.747852 TGTCCCCCGCAAAGAAAAAC 59.252 50.000 0.00 0.00 0.00 2.43
655 685 1.037493 GTCCCCCGCAAAGAAAAACT 58.963 50.000 0.00 0.00 0.00 2.66
656 686 1.411246 GTCCCCCGCAAAGAAAAACTT 59.589 47.619 0.00 0.00 40.98 2.66
657 687 2.624364 GTCCCCCGCAAAGAAAAACTTA 59.376 45.455 0.00 0.00 37.93 2.24
658 688 3.257375 GTCCCCCGCAAAGAAAAACTTAT 59.743 43.478 0.00 0.00 37.93 1.73
659 689 3.898741 TCCCCCGCAAAGAAAAACTTATT 59.101 39.130 0.00 0.00 37.93 1.40
660 690 4.345547 TCCCCCGCAAAGAAAAACTTATTT 59.654 37.500 0.00 0.00 37.93 1.40
661 691 5.060506 CCCCCGCAAAGAAAAACTTATTTT 58.939 37.500 0.00 0.00 39.81 1.82
663 693 6.426327 CCCCGCAAAGAAAAACTTATTTTTG 58.574 36.000 2.63 0.00 45.89 2.44
664 694 6.258947 CCCCGCAAAGAAAAACTTATTTTTGA 59.741 34.615 2.63 0.00 45.89 2.69
665 695 7.344441 CCCGCAAAGAAAAACTTATTTTTGAG 58.656 34.615 2.63 0.00 45.89 3.02
666 696 7.223777 CCCGCAAAGAAAAACTTATTTTTGAGA 59.776 33.333 2.63 0.00 45.89 3.27
667 697 8.268738 CCGCAAAGAAAAACTTATTTTTGAGAG 58.731 33.333 2.63 0.00 45.89 3.20
673 703 3.101643 ACTTATTTTTGAGAGGGGGCC 57.898 47.619 0.00 0.00 0.00 5.80
674 704 2.292257 ACTTATTTTTGAGAGGGGGCCC 60.292 50.000 15.76 15.76 0.00 5.80
683 713 3.100111 AGGGGGCCCTTTGATGAC 58.900 61.111 24.38 2.24 45.70 3.06
689 719 2.040412 GGGGCCCTTTGATGACTATAGG 59.960 54.545 24.38 0.00 0.00 2.57
691 721 3.908103 GGGCCCTTTGATGACTATAGGTA 59.092 47.826 17.04 0.00 0.00 3.08
693 723 4.347000 GGCCCTTTGATGACTATAGGTACA 59.653 45.833 4.43 2.13 0.00 2.90
697 727 8.154856 GCCCTTTGATGACTATAGGTACATTTA 58.845 37.037 4.43 0.00 0.00 1.40
708 738 8.810041 ACTATAGGTACATTTAATAACCCTCCG 58.190 37.037 4.43 0.00 32.10 4.63
710 740 5.922053 AGGTACATTTAATAACCCTCCGTC 58.078 41.667 0.00 0.00 32.10 4.79
711 741 5.059161 GGTACATTTAATAACCCTCCGTCC 58.941 45.833 0.00 0.00 0.00 4.79
713 743 3.524380 ACATTTAATAACCCTCCGTCCCA 59.476 43.478 0.00 0.00 0.00 4.37
714 744 4.167307 ACATTTAATAACCCTCCGTCCCAT 59.833 41.667 0.00 0.00 0.00 4.00
715 745 5.370289 ACATTTAATAACCCTCCGTCCCATA 59.630 40.000 0.00 0.00 0.00 2.74
716 746 5.972327 TTTAATAACCCTCCGTCCCATAA 57.028 39.130 0.00 0.00 0.00 1.90
717 747 6.518516 TTTAATAACCCTCCGTCCCATAAT 57.481 37.500 0.00 0.00 0.00 1.28
718 748 7.630005 TTTAATAACCCTCCGTCCCATAATA 57.370 36.000 0.00 0.00 0.00 0.98
719 749 7.817910 TTAATAACCCTCCGTCCCATAATAT 57.182 36.000 0.00 0.00 0.00 1.28
720 750 8.914213 TTAATAACCCTCCGTCCCATAATATA 57.086 34.615 0.00 0.00 0.00 0.86
721 751 7.817910 AATAACCCTCCGTCCCATAATATAA 57.182 36.000 0.00 0.00 0.00 0.98
722 752 5.757099 AACCCTCCGTCCCATAATATAAG 57.243 43.478 0.00 0.00 0.00 1.73
723 753 5.019657 ACCCTCCGTCCCATAATATAAGA 57.980 43.478 0.00 0.00 0.00 2.10
724 754 5.408824 ACCCTCCGTCCCATAATATAAGAA 58.591 41.667 0.00 0.00 0.00 2.52
725 755 5.247792 ACCCTCCGTCCCATAATATAAGAAC 59.752 44.000 0.00 0.00 0.00 3.01
726 756 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
727 757 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
728 758 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
729 759 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
730 760 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
731 761 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
732 762 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
733 763 8.605746 CGTCCCATAATATAAGAACGTTTTTGA 58.394 33.333 13.87 2.81 0.00 2.69
747 777 9.485206 AGAACGTTTTTGATATTAGTGTAGTGT 57.515 29.630 0.46 0.00 0.00 3.55
775 805 7.989416 AAACGTTCTTATATTTTGGGACAGA 57.011 32.000 0.00 0.00 42.39 3.41
776 806 7.611213 AACGTTCTTATATTTTGGGACAGAG 57.389 36.000 0.00 0.00 42.39 3.35
777 807 6.113411 ACGTTCTTATATTTTGGGACAGAGG 58.887 40.000 0.00 0.00 42.39 3.69
778 808 5.527582 CGTTCTTATATTTTGGGACAGAGGG 59.472 44.000 0.00 0.00 42.39 4.30
779 809 6.631766 CGTTCTTATATTTTGGGACAGAGGGA 60.632 42.308 0.00 0.00 42.39 4.20
780 810 6.500589 TCTTATATTTTGGGACAGAGGGAG 57.499 41.667 0.00 0.00 42.39 4.30
781 811 5.369699 TCTTATATTTTGGGACAGAGGGAGG 59.630 44.000 0.00 0.00 42.39 4.30
782 812 1.002857 ATTTTGGGACAGAGGGAGGG 58.997 55.000 0.00 0.00 42.39 4.30
783 813 0.104144 TTTTGGGACAGAGGGAGGGA 60.104 55.000 0.00 0.00 42.39 4.20
784 814 0.547712 TTTGGGACAGAGGGAGGGAG 60.548 60.000 0.00 0.00 42.39 4.30
795 825 5.375956 ACAGAGGGAGGGAGTAGTGATTATA 59.624 44.000 0.00 0.00 0.00 0.98
920 1032 2.653953 TACATTAAGCCGGCCCGCTC 62.654 60.000 26.15 0.00 38.44 5.03
921 1033 4.910585 ATTAAGCCGGCCCGCTCG 62.911 66.667 26.15 0.00 38.44 5.03
1314 1431 0.410270 AAGGAGAGTTCGGAGAGGGT 59.590 55.000 0.00 0.00 38.43 4.34
1435 1552 1.359848 CGAGATCAAAAGGGTCCGTG 58.640 55.000 0.00 0.00 0.00 4.94
1436 1553 1.739067 GAGATCAAAAGGGTCCGTGG 58.261 55.000 0.00 0.00 0.00 4.94
1437 1554 1.003233 GAGATCAAAAGGGTCCGTGGT 59.997 52.381 0.00 0.00 0.00 4.16
1438 1555 1.003233 AGATCAAAAGGGTCCGTGGTC 59.997 52.381 0.00 0.00 0.00 4.02
1439 1556 1.003233 GATCAAAAGGGTCCGTGGTCT 59.997 52.381 0.00 0.00 0.00 3.85
1440 1557 0.395312 TCAAAAGGGTCCGTGGTCTC 59.605 55.000 0.00 0.00 0.00 3.36
1441 1558 0.605589 CAAAAGGGTCCGTGGTCTCC 60.606 60.000 0.00 0.00 0.00 3.71
1474 1595 4.591321 TTTCTCCTGGGTTGCATTATCT 57.409 40.909 0.00 0.00 0.00 1.98
1484 1605 5.104151 TGGGTTGCATTATCTGGATGAGTTA 60.104 40.000 0.00 0.00 0.00 2.24
1529 1650 3.181451 GGATGTGATATCAGGTGCTGGAA 60.181 47.826 5.42 0.00 31.51 3.53
1562 1683 4.282496 AGAACAGAGATATGACCTTCGGT 58.718 43.478 0.00 0.00 39.44 4.69
1608 1735 9.227777 GTTACTTATTTTTCTGTGGATAGTGGT 57.772 33.333 0.00 0.00 0.00 4.16
1611 1738 7.827729 ACTTATTTTTCTGTGGATAGTGGTACC 59.172 37.037 4.43 4.43 0.00 3.34
1621 1748 1.330234 TAGTGGTACCAACTGCGTCA 58.670 50.000 18.31 0.00 0.00 4.35
1633 1760 1.002900 ACTGCGTCAATTGTTTCCGTG 60.003 47.619 5.13 4.84 0.00 4.94
1644 1771 6.485313 TCAATTGTTTCCGTGTCAGTAGAATT 59.515 34.615 5.13 0.00 0.00 2.17
1645 1772 6.877611 ATTGTTTCCGTGTCAGTAGAATTT 57.122 33.333 0.00 0.00 0.00 1.82
1661 1793 3.261643 AGAATTTCCACATTTTGAGGGGC 59.738 43.478 0.00 0.00 0.00 5.80
1673 1806 4.715130 AGGGGCGTCCACAGGCTA 62.715 66.667 9.07 0.00 38.24 3.93
1695 1828 3.118665 AGGAGTTTGCATGCTGTTTTTGT 60.119 39.130 20.33 0.00 0.00 2.83
1732 1873 1.915141 CTGGACCTTGGAGTTTGCAT 58.085 50.000 0.00 0.00 0.00 3.96
1746 1887 4.959723 AGTTTGCATGTTTGTATTTGCCT 58.040 34.783 0.00 0.00 34.20 4.75
1761 1903 7.380536 TGTATTTGCCTACGAGAACTTAGAAA 58.619 34.615 0.00 0.00 0.00 2.52
1762 1904 8.038944 TGTATTTGCCTACGAGAACTTAGAAAT 58.961 33.333 0.00 0.00 0.00 2.17
1820 1962 4.342862 AACTATCATGATTGAGGACCCG 57.657 45.455 21.64 0.66 34.73 5.28
1960 2102 7.223971 TCGCAGATGTGTACAAGTTAATATTCC 59.776 37.037 0.00 0.00 0.00 3.01
1999 2141 1.873591 GTGAATTGTTGCTCGGTGACT 59.126 47.619 0.00 0.00 0.00 3.41
2023 2165 9.857656 ACTAACATTTCATCCATCTGTAATGAT 57.142 29.630 9.45 2.38 36.54 2.45
2027 2169 4.541973 TCATCCATCTGTAATGATCCGG 57.458 45.455 0.00 0.00 0.00 5.14
2075 2769 8.559536 GTCTAGCTATGCTACATTTAAAATGCA 58.440 33.333 0.00 0.00 40.44 3.96
2079 2773 7.492344 AGCTATGCTACATTTAAAATGCAAACC 59.508 33.333 0.00 4.37 36.99 3.27
2186 2881 8.564574 TCCAGTTGTAACATAAGAAATTGTGTC 58.435 33.333 0.00 0.00 0.00 3.67
2469 3165 5.263599 TGGCAACATAACATCTTTCTGGAT 58.736 37.500 0.00 0.00 46.17 3.41
2497 3193 8.758633 TGAACAGCTTGTTATAGTAGTTCTTC 57.241 34.615 0.00 0.00 41.28 2.87
2498 3194 7.541091 TGAACAGCTTGTTATAGTAGTTCTTCG 59.459 37.037 0.00 0.00 41.28 3.79
2502 3198 7.008447 CAGCTTGTTATAGTAGTTCTTCGTGAC 59.992 40.741 0.00 0.00 0.00 3.67
2511 3207 0.596577 TTCTTCGTGACGGGTCTCAG 59.403 55.000 4.70 0.00 0.00 3.35
2538 3234 8.478775 AAAAGGCCTCATTAGTTAAAGTTCTT 57.521 30.769 5.23 0.00 0.00 2.52
2582 3278 5.956068 TCATTAGCACTGTTAATGTTGCA 57.044 34.783 19.41 4.02 38.83 4.08
2627 3323 3.700038 ACTACTGTTCTGAAGATACCCGG 59.300 47.826 0.00 0.00 0.00 5.73
2854 3778 2.543777 TCTGTTTACTTTCTGCCGCT 57.456 45.000 0.00 0.00 0.00 5.52
2882 3806 4.084011 TGACAAACACATGACCATCTCA 57.916 40.909 0.00 0.00 0.00 3.27
3063 3995 3.620488 GATTGCTTGTATGAACCTGGGA 58.380 45.455 0.00 0.00 0.00 4.37
3064 3996 3.737559 TTGCTTGTATGAACCTGGGAT 57.262 42.857 0.00 0.00 0.00 3.85
3155 4101 1.555075 CCTTGCTGGTAGTGCCTTCTA 59.445 52.381 0.00 0.00 38.35 2.10
3185 4131 2.268730 GCTGCTGCTTTTATCGCTTT 57.731 45.000 8.53 0.00 36.03 3.51
3240 4186 5.012664 TGGCACTTAAAAGACTGAGGTATGA 59.987 40.000 0.00 0.00 0.00 2.15
3241 4187 5.938125 GGCACTTAAAAGACTGAGGTATGAA 59.062 40.000 0.00 0.00 0.00 2.57
3252 4199 7.175104 AGACTGAGGTATGAAAGGCAAATAAA 58.825 34.615 0.00 0.00 0.00 1.40
3452 4402 7.835822 TGCAAGTAAACAAGCCATACAATAAT 58.164 30.769 0.00 0.00 0.00 1.28
3478 4428 4.396790 GGAAATAGCACAATCCGGTTAACA 59.603 41.667 8.10 0.00 0.00 2.41
3492 4442 3.363426 CGGTTAACATTTTGTTGATGGCG 59.637 43.478 8.10 0.00 41.30 5.69
3498 4448 3.002144 ACATTTTGTTGATGGCGTTTTGC 59.998 39.130 0.00 0.00 45.38 3.68
3570 4522 1.344438 ACTGTGAGCCGAACTTCATGA 59.656 47.619 0.00 0.00 0.00 3.07
3662 4614 6.128336 GGTCTATGCTCACAATCTTATGCATC 60.128 42.308 0.19 0.00 40.82 3.91
3684 4637 5.168569 TCGGTATCAACACTTCAGATTCAC 58.831 41.667 0.00 0.00 0.00 3.18
3689 4642 2.802247 CAACACTTCAGATTCACGCTGA 59.198 45.455 0.00 0.00 40.41 4.26
3782 4735 1.271379 CATGCATGCACTGAAACCTGT 59.729 47.619 25.37 0.00 0.00 4.00
3835 4963 4.407296 GGACTTGATGGATCCTAGTTCTGT 59.593 45.833 14.23 3.39 0.00 3.41
4031 5161 0.891373 TGCTCTACCTCTGTGCTCAC 59.109 55.000 0.00 0.00 0.00 3.51
4036 5166 4.007644 CCTCTGTGCTCACCGCCA 62.008 66.667 0.00 0.00 38.05 5.69
4064 5215 3.996032 GCTCTTTAAGCGATGACACTTG 58.004 45.455 0.00 0.00 42.21 3.16
4070 5221 1.597742 AGCGATGACACTTGCAACTT 58.402 45.000 0.00 0.00 0.00 2.66
4079 5230 2.171448 ACACTTGCAACTTCTCCAGTCT 59.829 45.455 0.00 0.00 32.94 3.24
4125 5276 1.236628 CAGCTGCTTCTTGTTGAGCT 58.763 50.000 0.00 0.00 40.67 4.09
4190 5341 4.151258 CACCTAATGTGCTCAACAACAG 57.849 45.455 0.00 0.00 43.61 3.16
4238 5389 7.739825 ACAGTAGCCATCATAGATGTTGTAAT 58.260 34.615 6.29 0.00 0.00 1.89
4320 5471 5.776716 ACTGGTGAATTTCCTTGATCAATGT 59.223 36.000 8.96 0.00 0.00 2.71
4480 5632 3.245990 TCTGATATCAAATGCTGCGAACG 59.754 43.478 6.90 0.00 0.00 3.95
4492 5644 2.665519 GCTGCGAACGTTGATTCACAAT 60.666 45.455 5.00 0.00 40.76 2.71
4588 5740 5.656416 AGAGAATAACTTGAGAGTCTCCCAG 59.344 44.000 17.57 14.85 34.21 4.45
4609 5761 7.124750 TCCCAGACATATATACATGACATCCTG 59.875 40.741 0.00 0.00 0.00 3.86
4647 5799 7.398904 GCCTAGGACCTTGATCTCTCTTAATAT 59.601 40.741 14.75 0.00 0.00 1.28
4803 5955 3.642141 ACAACCACCCTGATTTTCTTGT 58.358 40.909 0.00 0.00 0.00 3.16
4846 5998 1.533625 TGCCACTGCCTTGATGTAAC 58.466 50.000 0.00 0.00 36.33 2.50
4867 6019 4.806330 ACGTACTAACATCCACAACTGAG 58.194 43.478 0.00 0.00 0.00 3.35
4876 6028 5.728471 ACATCCACAACTGAGAAGTGATAG 58.272 41.667 9.81 3.24 35.33 2.08
4897 6049 4.423625 GGTGATAACCAGCTACCTTCAT 57.576 45.455 0.00 0.00 40.01 2.57
4916 6068 7.066284 ACCTTCATAGCACATGATAAGAAACAC 59.934 37.037 0.00 0.00 0.00 3.32
4920 6072 5.283060 AGCACATGATAAGAAACACGAAC 57.717 39.130 0.00 0.00 0.00 3.95
5142 6400 9.931698 TTCTATTTTCCTCCAGTCTATGTAGTA 57.068 33.333 0.00 0.00 0.00 1.82
5161 6419 5.483685 AGTATGGTCAGCTTTCACTGTTA 57.516 39.130 0.00 0.00 38.84 2.41
5170 6428 4.631813 CAGCTTTCACTGTTATCTGGGTAC 59.368 45.833 0.00 0.00 32.78 3.34
5187 6445 0.325860 TACTACGGGGCCAGTTCCAT 60.326 55.000 16.12 0.91 0.00 3.41
5196 6454 1.824230 GGCCAGTTCCATTGTTATGCA 59.176 47.619 0.00 0.00 0.00 3.96
5265 6525 4.149221 CGTTTTAACCCGGCTTTCATTTTC 59.851 41.667 0.00 0.00 0.00 2.29
5343 6603 1.382522 ATGCAAAGGCCACAGATACG 58.617 50.000 5.01 0.00 40.13 3.06
5463 6723 1.003580 CCATCAGCAGTGGTAAGGTGT 59.996 52.381 0.00 0.00 34.97 4.16
5497 6757 9.248291 CAGTATATTCCATAAATTTGTTGTGGC 57.752 33.333 0.00 0.00 0.00 5.01
5551 6811 4.447054 TGCGTATGGCTTGATTTTGTTTTG 59.553 37.500 0.00 0.00 44.05 2.44
5622 6882 2.275318 GCTCTGTATCTGTTGACAGCC 58.725 52.381 6.27 0.00 42.35 4.85
5744 7004 6.870971 TTTCTTGTAAAGCCGAGTTACAAT 57.129 33.333 14.51 0.00 45.56 2.71
5749 7009 0.321298 AAGCCGAGTTACAATGCCGT 60.321 50.000 0.00 0.00 0.00 5.68
5767 7027 1.613437 CGTTGAATGAGCACCCCTTTT 59.387 47.619 0.00 0.00 0.00 2.27
5866 7126 8.533569 AAAAGGAAAAGGTCTTGAAGTATTGA 57.466 30.769 0.00 0.00 0.00 2.57
5948 7209 2.546795 GCCATATCTCCCTGTGAAGTCG 60.547 54.545 0.00 0.00 0.00 4.18
5986 7247 5.278907 CCACCAATTGCTCAACATTTCTGTA 60.279 40.000 0.00 0.00 33.36 2.74
5987 7248 6.392354 CACCAATTGCTCAACATTTCTGTAT 58.608 36.000 0.00 0.00 33.36 2.29
6017 7282 0.808060 GGCTCTCTCGCTTACCTTGC 60.808 60.000 0.00 0.00 0.00 4.01
6050 7315 8.989653 ACTTCTAGTCTACTATTGTTTTCTGC 57.010 34.615 0.00 0.00 0.00 4.26
6073 7338 4.426416 CGTCCATGAGACCGTAATGTAAA 58.574 43.478 0.00 0.00 43.08 2.01
6113 7378 6.183360 ACGGTATGCTGTACATGTAGTTATGT 60.183 38.462 5.62 0.00 43.34 2.29
6165 7439 3.829886 TTCTATTGTGAAAAGGCTGCG 57.170 42.857 0.00 0.00 0.00 5.18
6208 7482 5.440610 AGAGCGTATTTGAATCCTGGAAAT 58.559 37.500 0.00 0.00 0.00 2.17
6225 7499 4.572795 TGGAAATTTTCTTCCCGCAAAAAC 59.427 37.500 8.93 0.00 43.78 2.43
6226 7500 4.572795 GGAAATTTTCTTCCCGCAAAAACA 59.427 37.500 8.93 0.00 39.26 2.83
6231 7505 5.476752 TTTCTTCCCGCAAAAACAAAATG 57.523 34.783 0.00 0.00 0.00 2.32
6299 7672 5.903810 ACAGTATCCTTTCTACGGACATTC 58.096 41.667 0.00 0.00 32.41 2.67
6344 10833 0.169672 GTAGCAAGCACGTAGGACGA 59.830 55.000 5.94 0.00 46.05 4.20
6400 10898 0.740737 AGCTGACCACAGTTTTGCAC 59.259 50.000 0.00 0.00 45.04 4.57
6423 10925 3.007398 AGAAAGAACAGCAGATTCGACCT 59.993 43.478 0.00 0.00 0.00 3.85
6424 10926 3.409026 AAGAACAGCAGATTCGACCTT 57.591 42.857 0.00 0.00 0.00 3.50
6437 10939 3.401033 TCGACCTTGCAGATTTGAAGA 57.599 42.857 0.00 0.00 0.00 2.87
6473 10983 1.381056 AACAGGCCCAACAGCACAA 60.381 52.632 0.00 0.00 0.00 3.33
6475 10985 2.906897 AGGCCCAACAGCACAACG 60.907 61.111 0.00 0.00 0.00 4.10
6501 11011 3.607422 TGAAGACAACAACGCAAGATG 57.393 42.857 0.00 0.00 46.71 2.90
6640 11151 2.276309 CTCCATTCCAGGCCTCCCAC 62.276 65.000 0.00 0.00 0.00 4.61
6682 11196 1.284657 GTGTGGCAGACGATGATGAG 58.715 55.000 0.00 0.00 0.00 2.90
6688 11202 1.269517 GCAGACGATGATGAGGAGGAC 60.270 57.143 0.00 0.00 0.00 3.85
6694 11208 1.885887 GATGATGAGGAGGACGAGGAG 59.114 57.143 0.00 0.00 0.00 3.69
6699 11213 1.340211 TGAGGAGGACGAGGAGAAGAC 60.340 57.143 0.00 0.00 0.00 3.01
6798 11312 0.673333 TCAAGCAACGCGTCCATCAT 60.673 50.000 14.44 0.00 0.00 2.45
6839 11353 4.379243 ACAGGTTCGGCAGCGAGG 62.379 66.667 0.00 0.00 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.463444 GGAGAATTCGGTTTGGTGACG 59.537 52.381 0.00 0.00 0.00 4.35
1 2 2.500229 TGGAGAATTCGGTTTGGTGAC 58.500 47.619 0.00 0.00 0.00 3.67
2 3 2.940994 TGGAGAATTCGGTTTGGTGA 57.059 45.000 0.00 0.00 0.00 4.02
3 4 3.081061 TGATGGAGAATTCGGTTTGGTG 58.919 45.455 0.00 0.00 0.00 4.17
4 5 3.081804 GTGATGGAGAATTCGGTTTGGT 58.918 45.455 0.00 0.00 0.00 3.67
5 6 2.095853 CGTGATGGAGAATTCGGTTTGG 59.904 50.000 0.00 0.00 0.00 3.28
6 7 2.742053 ACGTGATGGAGAATTCGGTTTG 59.258 45.455 0.00 0.00 0.00 2.93
7 8 3.000727 GACGTGATGGAGAATTCGGTTT 58.999 45.455 0.00 0.00 0.00 3.27
8 9 2.618053 GACGTGATGGAGAATTCGGTT 58.382 47.619 0.00 0.00 0.00 4.44
9 10 1.469251 CGACGTGATGGAGAATTCGGT 60.469 52.381 0.00 0.00 0.00 4.69
10 11 1.200483 CGACGTGATGGAGAATTCGG 58.800 55.000 0.00 0.00 0.00 4.30
11 12 1.200483 CCGACGTGATGGAGAATTCG 58.800 55.000 0.00 0.00 0.00 3.34
12 13 1.134788 ACCCGACGTGATGGAGAATTC 60.135 52.381 0.00 0.00 0.00 2.17
13 14 0.902531 ACCCGACGTGATGGAGAATT 59.097 50.000 0.00 0.00 0.00 2.17
14 15 0.902531 AACCCGACGTGATGGAGAAT 59.097 50.000 0.00 0.00 0.00 2.40
15 16 0.682852 AAACCCGACGTGATGGAGAA 59.317 50.000 0.00 0.00 0.00 2.87
16 17 1.475280 CTAAACCCGACGTGATGGAGA 59.525 52.381 0.00 0.00 0.00 3.71
17 18 1.470979 CCTAAACCCGACGTGATGGAG 60.471 57.143 0.00 0.00 0.00 3.86
18 19 0.533491 CCTAAACCCGACGTGATGGA 59.467 55.000 0.00 0.00 0.00 3.41
19 20 0.248289 ACCTAAACCCGACGTGATGG 59.752 55.000 0.00 0.00 0.00 3.51
20 21 2.945447 TACCTAAACCCGACGTGATG 57.055 50.000 0.00 0.00 0.00 3.07
21 22 2.363359 GGATACCTAAACCCGACGTGAT 59.637 50.000 0.00 0.00 0.00 3.06
22 23 1.750778 GGATACCTAAACCCGACGTGA 59.249 52.381 0.00 0.00 0.00 4.35
23 24 2.214387 GGATACCTAAACCCGACGTG 57.786 55.000 0.00 0.00 0.00 4.49
33 34 7.816876 CTGGATCAGATCGGGGGATACCTAA 62.817 52.000 4.23 0.00 46.01 2.69
34 35 6.415127 CTGGATCAGATCGGGGGATACCTA 62.415 54.167 4.23 0.00 46.01 3.08
35 36 5.743543 CTGGATCAGATCGGGGGATACCT 62.744 56.522 4.23 0.00 46.01 3.08
36 37 3.477198 CTGGATCAGATCGGGGGATACC 61.477 59.091 4.23 0.00 46.03 2.73
37 38 1.827969 CTGGATCAGATCGGGGGATAC 59.172 57.143 4.23 0.00 32.44 2.24
38 39 1.716503 TCTGGATCAGATCGGGGGATA 59.283 52.381 4.23 0.00 35.39 2.59
39 40 0.489117 TCTGGATCAGATCGGGGGAT 59.511 55.000 4.23 0.00 35.39 3.85
40 41 0.489117 ATCTGGATCAGATCGGGGGA 59.511 55.000 4.23 0.93 46.83 4.81
41 42 3.079480 ATCTGGATCAGATCGGGGG 57.921 57.895 4.23 0.00 46.83 5.40
48 49 0.755327 TTCGGCGGATCTGGATCAGA 60.755 55.000 7.21 0.00 44.99 3.27
49 50 0.319383 CTTCGGCGGATCTGGATCAG 60.319 60.000 7.21 9.14 39.54 2.90
50 51 1.742146 CTTCGGCGGATCTGGATCA 59.258 57.895 7.21 0.00 39.54 2.92
51 52 1.666234 GCTTCGGCGGATCTGGATC 60.666 63.158 7.21 2.24 37.11 3.36
52 53 2.423446 GCTTCGGCGGATCTGGAT 59.577 61.111 7.21 0.00 0.00 3.41
69 70 2.027625 GAGACAAGTGGTTCGGCCG 61.028 63.158 22.12 22.12 41.21 6.13
70 71 1.671379 GGAGACAAGTGGTTCGGCC 60.671 63.158 0.00 0.00 37.90 6.13
71 72 2.027625 CGGAGACAAGTGGTTCGGC 61.028 63.158 0.00 0.00 0.00 5.54
72 73 0.246635 ATCGGAGACAAGTGGTTCGG 59.753 55.000 0.00 0.00 42.51 4.30
73 74 1.630148 GATCGGAGACAAGTGGTTCG 58.370 55.000 0.00 0.00 42.51 3.95
74 75 1.630148 CGATCGGAGACAAGTGGTTC 58.370 55.000 7.38 0.00 42.51 3.62
75 76 0.389948 GCGATCGGAGACAAGTGGTT 60.390 55.000 18.30 0.00 42.51 3.67
76 77 1.215647 GCGATCGGAGACAAGTGGT 59.784 57.895 18.30 0.00 42.51 4.16
77 78 1.874019 CGCGATCGGAGACAAGTGG 60.874 63.158 18.30 0.00 42.51 4.00
78 79 3.680525 CGCGATCGGAGACAAGTG 58.319 61.111 18.30 0.00 42.51 3.16
93 94 1.887707 CTAAAGGGATCGCCACCGC 60.888 63.158 6.09 0.00 35.15 5.68
94 95 0.810031 CACTAAAGGGATCGCCACCG 60.810 60.000 6.09 0.00 35.15 4.94
95 96 1.095807 GCACTAAAGGGATCGCCACC 61.096 60.000 6.09 0.00 35.15 4.61
96 97 1.095807 GGCACTAAAGGGATCGCCAC 61.096 60.000 6.09 0.00 39.38 5.01
97 98 1.223487 GGCACTAAAGGGATCGCCA 59.777 57.895 6.09 0.00 39.38 5.69
98 99 1.887707 CGGCACTAAAGGGATCGCC 60.888 63.158 6.09 0.00 36.16 5.54
99 100 2.534903 GCGGCACTAAAGGGATCGC 61.535 63.158 0.54 0.54 35.12 4.58
100 101 1.887707 GGCGGCACTAAAGGGATCG 60.888 63.158 3.07 0.00 0.00 3.69
101 102 1.887707 CGGCGGCACTAAAGGGATC 60.888 63.158 10.53 0.00 0.00 3.36
102 103 2.189521 CGGCGGCACTAAAGGGAT 59.810 61.111 10.53 0.00 0.00 3.85
103 104 4.090588 CCGGCGGCACTAAAGGGA 62.091 66.667 15.42 0.00 0.00 4.20
120 121 4.819761 TGCATCTGAGGTCGCCGC 62.820 66.667 0.00 0.00 0.00 6.53
121 122 2.887568 GTGCATCTGAGGTCGCCG 60.888 66.667 0.00 0.00 0.00 6.46
122 123 2.512515 GGTGCATCTGAGGTCGCC 60.513 66.667 0.00 1.82 0.00 5.54
123 124 2.103042 GTGGTGCATCTGAGGTCGC 61.103 63.158 0.00 0.00 0.00 5.19
124 125 0.320683 TTGTGGTGCATCTGAGGTCG 60.321 55.000 0.00 0.00 0.00 4.79
125 126 1.002430 TCTTGTGGTGCATCTGAGGTC 59.998 52.381 0.00 0.00 0.00 3.85
126 127 1.002888 CTCTTGTGGTGCATCTGAGGT 59.997 52.381 0.00 0.00 0.00 3.85
127 128 1.678123 CCTCTTGTGGTGCATCTGAGG 60.678 57.143 12.06 12.06 35.12 3.86
128 129 1.277273 TCCTCTTGTGGTGCATCTGAG 59.723 52.381 0.00 0.96 0.00 3.35
129 130 1.277273 CTCCTCTTGTGGTGCATCTGA 59.723 52.381 0.00 0.00 0.00 3.27
130 131 1.678123 CCTCCTCTTGTGGTGCATCTG 60.678 57.143 0.00 0.00 0.00 2.90
131 132 0.617413 CCTCCTCTTGTGGTGCATCT 59.383 55.000 0.00 0.00 0.00 2.90
132 133 0.326264 ACCTCCTCTTGTGGTGCATC 59.674 55.000 0.00 0.00 39.36 3.91
133 134 0.773644 AACCTCCTCTTGTGGTGCAT 59.226 50.000 0.00 0.00 39.92 3.96
134 135 0.108585 GAACCTCCTCTTGTGGTGCA 59.891 55.000 0.00 0.00 39.92 4.57
135 136 0.606673 GGAACCTCCTCTTGTGGTGC 60.607 60.000 0.00 0.00 39.92 5.01
136 137 0.320771 CGGAACCTCCTCTTGTGGTG 60.321 60.000 0.00 0.00 39.92 4.17
137 138 1.481056 CCGGAACCTCCTCTTGTGGT 61.481 60.000 0.00 0.00 42.62 4.16
138 139 1.296715 CCGGAACCTCCTCTTGTGG 59.703 63.158 0.00 0.00 33.30 4.17
139 140 0.320771 CACCGGAACCTCCTCTTGTG 60.321 60.000 9.46 0.00 33.30 3.33
140 141 1.481056 CCACCGGAACCTCCTCTTGT 61.481 60.000 9.46 0.00 33.30 3.16
141 142 1.192146 TCCACCGGAACCTCCTCTTG 61.192 60.000 9.46 0.00 33.30 3.02
142 143 0.905337 CTCCACCGGAACCTCCTCTT 60.905 60.000 9.46 0.00 33.30 2.85
143 144 1.305381 CTCCACCGGAACCTCCTCT 60.305 63.158 9.46 0.00 33.30 3.69
144 145 2.359967 CCTCCACCGGAACCTCCTC 61.360 68.421 9.46 0.00 33.30 3.71
145 146 2.284699 CCTCCACCGGAACCTCCT 60.285 66.667 9.46 0.00 33.30 3.69
146 147 4.097361 GCCTCCACCGGAACCTCC 62.097 72.222 9.46 0.00 0.00 4.30
147 148 4.452733 CGCCTCCACCGGAACCTC 62.453 72.222 9.46 0.00 0.00 3.85
149 150 4.754667 GTCGCCTCCACCGGAACC 62.755 72.222 9.46 0.00 0.00 3.62
150 151 3.934391 CTGTCGCCTCCACCGGAAC 62.934 68.421 9.46 0.00 0.00 3.62
151 152 3.691342 CTGTCGCCTCCACCGGAA 61.691 66.667 9.46 0.00 0.00 4.30
193 194 3.746949 GATGGTGAGGGGCGCTGAG 62.747 68.421 9.52 0.00 0.00 3.35
194 195 3.785859 GATGGTGAGGGGCGCTGA 61.786 66.667 9.52 0.00 0.00 4.26
195 196 4.100084 TGATGGTGAGGGGCGCTG 62.100 66.667 9.52 0.00 0.00 5.18
196 197 4.101448 GTGATGGTGAGGGGCGCT 62.101 66.667 7.64 2.69 0.00 5.92
198 199 2.556840 AATGGTGATGGTGAGGGGCG 62.557 60.000 0.00 0.00 0.00 6.13
199 200 0.324645 AAATGGTGATGGTGAGGGGC 60.325 55.000 0.00 0.00 0.00 5.80
200 201 1.272648 ACAAATGGTGATGGTGAGGGG 60.273 52.381 0.00 0.00 0.00 4.79
201 202 2.094675 GACAAATGGTGATGGTGAGGG 58.905 52.381 0.00 0.00 0.00 4.30
202 203 2.094675 GGACAAATGGTGATGGTGAGG 58.905 52.381 0.00 0.00 0.00 3.86
203 204 2.094675 GGGACAAATGGTGATGGTGAG 58.905 52.381 0.00 0.00 0.00 3.51
204 205 1.272425 GGGGACAAATGGTGATGGTGA 60.272 52.381 0.00 0.00 0.00 4.02
205 206 1.185315 GGGGACAAATGGTGATGGTG 58.815 55.000 0.00 0.00 0.00 4.17
206 207 0.041090 GGGGGACAAATGGTGATGGT 59.959 55.000 0.00 0.00 0.00 3.55
207 208 1.037030 CGGGGGACAAATGGTGATGG 61.037 60.000 0.00 0.00 0.00 3.51
208 209 0.323360 ACGGGGGACAAATGGTGATG 60.323 55.000 0.00 0.00 0.00 3.07
209 210 0.034477 GACGGGGGACAAATGGTGAT 60.034 55.000 0.00 0.00 0.00 3.06
210 211 1.377229 GACGGGGGACAAATGGTGA 59.623 57.895 0.00 0.00 0.00 4.02
211 212 2.038269 CGACGGGGGACAAATGGTG 61.038 63.158 0.00 0.00 0.00 4.17
212 213 1.193462 TACGACGGGGGACAAATGGT 61.193 55.000 0.00 0.00 0.00 3.55
213 214 0.741927 GTACGACGGGGGACAAATGG 60.742 60.000 0.00 0.00 0.00 3.16
214 215 0.248289 AGTACGACGGGGGACAAATG 59.752 55.000 0.00 0.00 0.00 2.32
215 216 0.533951 GAGTACGACGGGGGACAAAT 59.466 55.000 0.00 0.00 0.00 2.32
216 217 1.535204 GGAGTACGACGGGGGACAAA 61.535 60.000 0.00 0.00 0.00 2.83
217 218 1.978617 GGAGTACGACGGGGGACAA 60.979 63.158 0.00 0.00 0.00 3.18
218 219 2.361610 GGAGTACGACGGGGGACA 60.362 66.667 0.00 0.00 0.00 4.02
219 220 3.143515 GGGAGTACGACGGGGGAC 61.144 72.222 0.00 0.00 0.00 4.46
220 221 3.341629 AGGGAGTACGACGGGGGA 61.342 66.667 0.00 0.00 0.00 4.81
221 222 2.832201 GAGGGAGTACGACGGGGG 60.832 72.222 0.00 0.00 0.00 5.40
222 223 3.207669 CGAGGGAGTACGACGGGG 61.208 72.222 0.00 0.00 0.00 5.73
223 224 2.437359 ACGAGGGAGTACGACGGG 60.437 66.667 0.00 0.00 0.00 5.28
224 225 1.742880 TGACGAGGGAGTACGACGG 60.743 63.158 0.00 0.00 0.00 4.79
225 226 1.423056 GTGACGAGGGAGTACGACG 59.577 63.158 0.00 0.00 0.00 5.12
226 227 1.294659 ACGTGACGAGGGAGTACGAC 61.295 60.000 13.70 0.00 38.08 4.34
227 228 0.603707 AACGTGACGAGGGAGTACGA 60.604 55.000 13.70 0.00 38.08 3.43
228 229 0.179205 GAACGTGACGAGGGAGTACG 60.179 60.000 13.70 0.00 40.30 3.67
229 230 0.179205 CGAACGTGACGAGGGAGTAC 60.179 60.000 13.70 0.00 0.00 2.73
230 231 1.300971 CCGAACGTGACGAGGGAGTA 61.301 60.000 13.70 0.00 0.00 2.59
231 232 2.623915 CCGAACGTGACGAGGGAGT 61.624 63.158 13.70 0.00 0.00 3.85
232 233 1.654954 ATCCGAACGTGACGAGGGAG 61.655 60.000 13.70 0.00 0.00 4.30
233 234 1.676635 ATCCGAACGTGACGAGGGA 60.677 57.895 13.70 14.98 0.00 4.20
234 235 1.516386 CATCCGAACGTGACGAGGG 60.516 63.158 13.70 9.69 0.00 4.30
235 236 1.516386 CCATCCGAACGTGACGAGG 60.516 63.158 13.70 12.14 0.00 4.63
236 237 2.158959 GCCATCCGAACGTGACGAG 61.159 63.158 13.70 2.20 0.00 4.18
237 238 2.126228 GCCATCCGAACGTGACGA 60.126 61.111 13.70 0.00 0.00 4.20
238 239 2.126071 AGCCATCCGAACGTGACG 60.126 61.111 2.24 2.24 0.00 4.35
239 240 2.158959 CGAGCCATCCGAACGTGAC 61.159 63.158 0.00 0.00 0.00 3.67
240 241 1.307355 TACGAGCCATCCGAACGTGA 61.307 55.000 0.00 0.00 38.18 4.35
241 242 0.866061 CTACGAGCCATCCGAACGTG 60.866 60.000 0.00 0.00 38.18 4.49
242 243 1.310933 ACTACGAGCCATCCGAACGT 61.311 55.000 0.00 0.00 40.23 3.99
243 244 0.866061 CACTACGAGCCATCCGAACG 60.866 60.000 0.00 0.00 0.00 3.95
244 245 0.527817 CCACTACGAGCCATCCGAAC 60.528 60.000 0.00 0.00 0.00 3.95
245 246 0.968901 ACCACTACGAGCCATCCGAA 60.969 55.000 0.00 0.00 0.00 4.30
246 247 0.107066 TACCACTACGAGCCATCCGA 60.107 55.000 0.00 0.00 0.00 4.55
247 248 0.742505 TTACCACTACGAGCCATCCG 59.257 55.000 0.00 0.00 0.00 4.18
248 249 1.479323 TGTTACCACTACGAGCCATCC 59.521 52.381 0.00 0.00 0.00 3.51
249 250 2.953466 TGTTACCACTACGAGCCATC 57.047 50.000 0.00 0.00 0.00 3.51
250 251 3.906720 AATGTTACCACTACGAGCCAT 57.093 42.857 0.00 0.00 0.00 4.40
251 252 3.688694 AAATGTTACCACTACGAGCCA 57.311 42.857 0.00 0.00 0.00 4.75
252 253 4.251268 AGAAAATGTTACCACTACGAGCC 58.749 43.478 0.00 0.00 0.00 4.70
253 254 5.407387 TGAAGAAAATGTTACCACTACGAGC 59.593 40.000 0.00 0.00 0.00 5.03
254 255 6.645415 AGTGAAGAAAATGTTACCACTACGAG 59.355 38.462 0.00 0.00 32.39 4.18
255 256 6.422701 CAGTGAAGAAAATGTTACCACTACGA 59.577 38.462 0.00 0.00 32.81 3.43
256 257 6.202188 ACAGTGAAGAAAATGTTACCACTACG 59.798 38.462 0.00 0.00 32.81 3.51
257 258 7.225931 TGACAGTGAAGAAAATGTTACCACTAC 59.774 37.037 0.00 0.00 32.81 2.73
258 259 7.276658 TGACAGTGAAGAAAATGTTACCACTA 58.723 34.615 0.00 0.00 32.81 2.74
259 260 6.119536 TGACAGTGAAGAAAATGTTACCACT 58.880 36.000 0.00 0.00 34.17 4.00
260 261 6.371809 TGACAGTGAAGAAAATGTTACCAC 57.628 37.500 0.00 0.00 0.00 4.16
261 262 6.601613 ACTTGACAGTGAAGAAAATGTTACCA 59.398 34.615 6.78 0.00 0.00 3.25
262 263 7.027778 ACTTGACAGTGAAGAAAATGTTACC 57.972 36.000 6.78 0.00 0.00 2.85
263 264 9.651718 CTAACTTGACAGTGAAGAAAATGTTAC 57.348 33.333 6.78 0.00 31.60 2.50
264 265 8.836413 CCTAACTTGACAGTGAAGAAAATGTTA 58.164 33.333 6.78 0.00 31.60 2.41
265 266 7.682021 GCCTAACTTGACAGTGAAGAAAATGTT 60.682 37.037 6.78 0.00 31.60 2.71
266 267 6.238759 GCCTAACTTGACAGTGAAGAAAATGT 60.239 38.462 6.78 0.00 31.60 2.71
267 268 6.016777 AGCCTAACTTGACAGTGAAGAAAATG 60.017 38.462 6.78 0.00 31.60 2.32
268 269 6.064717 AGCCTAACTTGACAGTGAAGAAAAT 58.935 36.000 6.78 0.00 31.60 1.82
269 270 5.437060 AGCCTAACTTGACAGTGAAGAAAA 58.563 37.500 6.78 0.00 31.60 2.29
270 271 5.036117 AGCCTAACTTGACAGTGAAGAAA 57.964 39.130 6.78 0.00 31.60 2.52
271 272 4.689612 AGCCTAACTTGACAGTGAAGAA 57.310 40.909 6.78 0.00 31.60 2.52
272 273 5.801531 TTAGCCTAACTTGACAGTGAAGA 57.198 39.130 6.78 0.00 31.60 2.87
273 274 6.564125 CGTTTTAGCCTAACTTGACAGTGAAG 60.564 42.308 0.00 0.00 31.60 3.02
274 275 5.235616 CGTTTTAGCCTAACTTGACAGTGAA 59.764 40.000 0.00 0.00 31.60 3.18
275 276 4.748102 CGTTTTAGCCTAACTTGACAGTGA 59.252 41.667 0.00 0.00 31.60 3.41
276 277 4.510340 ACGTTTTAGCCTAACTTGACAGTG 59.490 41.667 0.00 0.00 31.60 3.66
277 278 4.700700 ACGTTTTAGCCTAACTTGACAGT 58.299 39.130 0.00 0.00 33.11 3.55
278 279 4.989168 AGACGTTTTAGCCTAACTTGACAG 59.011 41.667 0.00 0.00 0.00 3.51
279 280 4.748102 CAGACGTTTTAGCCTAACTTGACA 59.252 41.667 0.00 0.00 0.00 3.58
280 281 4.986659 TCAGACGTTTTAGCCTAACTTGAC 59.013 41.667 0.00 0.00 0.00 3.18
281 282 5.204409 TCAGACGTTTTAGCCTAACTTGA 57.796 39.130 0.00 0.00 0.00 3.02
282 283 5.163854 CCATCAGACGTTTTAGCCTAACTTG 60.164 44.000 0.00 0.00 0.00 3.16
283 284 4.935808 CCATCAGACGTTTTAGCCTAACTT 59.064 41.667 0.00 0.00 0.00 2.66
284 285 4.504858 CCATCAGACGTTTTAGCCTAACT 58.495 43.478 0.00 0.00 0.00 2.24
285 286 3.063588 GCCATCAGACGTTTTAGCCTAAC 59.936 47.826 0.00 0.00 0.00 2.34
286 287 3.267483 GCCATCAGACGTTTTAGCCTAA 58.733 45.455 0.00 0.00 0.00 2.69
287 288 2.235155 TGCCATCAGACGTTTTAGCCTA 59.765 45.455 0.00 0.00 0.00 3.93
288 289 1.003118 TGCCATCAGACGTTTTAGCCT 59.997 47.619 0.00 0.00 0.00 4.58
289 290 1.448985 TGCCATCAGACGTTTTAGCC 58.551 50.000 0.00 0.00 0.00 3.93
290 291 3.764885 ATTGCCATCAGACGTTTTAGC 57.235 42.857 0.00 0.00 0.00 3.09
291 292 5.295431 TGAATTGCCATCAGACGTTTTAG 57.705 39.130 0.00 0.00 0.00 1.85
292 293 5.447144 CGATGAATTGCCATCAGACGTTTTA 60.447 40.000 7.63 0.00 42.21 1.52
293 294 4.672542 CGATGAATTGCCATCAGACGTTTT 60.673 41.667 7.63 0.00 42.21 2.43
294 295 3.181507 CGATGAATTGCCATCAGACGTTT 60.182 43.478 7.63 0.00 42.21 3.60
295 296 2.352651 CGATGAATTGCCATCAGACGTT 59.647 45.455 7.63 0.00 42.21 3.99
296 297 1.935873 CGATGAATTGCCATCAGACGT 59.064 47.619 7.63 0.00 42.21 4.34
297 298 1.935873 ACGATGAATTGCCATCAGACG 59.064 47.619 7.63 0.00 42.21 4.18
298 299 4.122776 AGTACGATGAATTGCCATCAGAC 58.877 43.478 7.63 4.85 42.21 3.51
299 300 4.406648 AGTACGATGAATTGCCATCAGA 57.593 40.909 7.63 0.00 42.21 3.27
300 301 5.532557 TCTAGTACGATGAATTGCCATCAG 58.467 41.667 7.63 3.85 42.21 2.90
301 302 5.529581 TCTAGTACGATGAATTGCCATCA 57.470 39.130 7.63 0.00 42.21 3.07
302 303 5.107298 GCTTCTAGTACGATGAATTGCCATC 60.107 44.000 0.00 0.00 39.52 3.51
303 304 4.752101 GCTTCTAGTACGATGAATTGCCAT 59.248 41.667 0.00 0.00 0.00 4.40
304 305 4.119862 GCTTCTAGTACGATGAATTGCCA 58.880 43.478 0.00 0.00 0.00 4.92
305 306 3.495001 GGCTTCTAGTACGATGAATTGCC 59.505 47.826 0.00 10.48 0.00 4.52
306 307 4.119862 TGGCTTCTAGTACGATGAATTGC 58.880 43.478 0.00 0.00 0.00 3.56
307 308 6.923508 TGTATGGCTTCTAGTACGATGAATTG 59.076 38.462 0.00 0.00 0.00 2.32
308 309 7.050970 TGTATGGCTTCTAGTACGATGAATT 57.949 36.000 0.00 0.00 0.00 2.17
309 310 6.650427 TGTATGGCTTCTAGTACGATGAAT 57.350 37.500 0.00 0.00 0.00 2.57
310 311 6.447162 CATGTATGGCTTCTAGTACGATGAA 58.553 40.000 0.00 0.00 0.00 2.57
311 312 5.048013 CCATGTATGGCTTCTAGTACGATGA 60.048 44.000 0.00 0.00 41.75 2.92
312 313 5.164233 CCATGTATGGCTTCTAGTACGATG 58.836 45.833 0.00 0.00 41.75 3.84
313 314 4.220821 CCCATGTATGGCTTCTAGTACGAT 59.779 45.833 5.35 0.00 46.70 3.73
314 315 3.572682 CCCATGTATGGCTTCTAGTACGA 59.427 47.826 5.35 0.00 46.70 3.43
315 316 3.572682 TCCCATGTATGGCTTCTAGTACG 59.427 47.826 5.35 0.00 46.70 3.67
316 317 5.246203 TGATCCCATGTATGGCTTCTAGTAC 59.754 44.000 5.35 0.00 46.70 2.73
317 318 5.402630 TGATCCCATGTATGGCTTCTAGTA 58.597 41.667 5.35 0.00 46.70 1.82
318 319 4.234550 TGATCCCATGTATGGCTTCTAGT 58.765 43.478 5.35 0.00 46.70 2.57
319 320 4.897509 TGATCCCATGTATGGCTTCTAG 57.102 45.455 5.35 0.00 46.70 2.43
320 321 5.848286 ATTGATCCCATGTATGGCTTCTA 57.152 39.130 5.35 2.55 46.70 2.10
321 322 4.736611 ATTGATCCCATGTATGGCTTCT 57.263 40.909 5.35 0.00 46.70 2.85
322 323 5.316167 TGTATTGATCCCATGTATGGCTTC 58.684 41.667 5.35 5.16 46.70 3.86
323 324 5.323382 TGTATTGATCCCATGTATGGCTT 57.677 39.130 5.35 0.00 46.70 4.35
324 325 4.999469 TGTATTGATCCCATGTATGGCT 57.001 40.909 5.35 0.00 46.70 4.75
325 326 5.012239 ACATGTATTGATCCCATGTATGGC 58.988 41.667 12.81 0.00 45.36 4.40
326 327 6.479006 AGACATGTATTGATCCCATGTATGG 58.521 40.000 13.87 3.85 46.70 2.74
327 328 7.120285 GGAAGACATGTATTGATCCCATGTATG 59.880 40.741 11.08 7.55 46.70 2.39
328 329 7.170965 GGAAGACATGTATTGATCCCATGTAT 58.829 38.462 11.08 10.13 46.70 2.29
329 330 6.101005 TGGAAGACATGTATTGATCCCATGTA 59.899 38.462 11.08 0.00 46.70 2.29
331 332 5.379187 TGGAAGACATGTATTGATCCCATG 58.621 41.667 11.08 9.09 41.31 3.66
332 333 5.651612 TGGAAGACATGTATTGATCCCAT 57.348 39.130 11.08 0.00 0.00 4.00
333 334 5.651612 ATGGAAGACATGTATTGATCCCA 57.348 39.130 11.08 11.76 38.70 4.37
370 371 3.818773 GACCCCATATTAAACATGTCCCG 59.181 47.826 0.00 0.00 0.00 5.14
371 372 5.061721 AGACCCCATATTAAACATGTCCC 57.938 43.478 0.00 0.00 0.00 4.46
380 381 7.514721 AGCTTCGAAATTAGACCCCATATTAA 58.485 34.615 0.00 0.00 0.00 1.40
412 413 2.671619 CACCGTTGCATTCCCCGT 60.672 61.111 0.00 0.00 0.00 5.28
413 414 1.519751 TTTCACCGTTGCATTCCCCG 61.520 55.000 0.00 0.00 0.00 5.73
420 421 2.093973 ACAAAACCATTTCACCGTTGCA 60.094 40.909 0.00 0.00 0.00 4.08
421 422 2.545731 ACAAAACCATTTCACCGTTGC 58.454 42.857 0.00 0.00 0.00 4.17
424 425 5.755861 CCAAATTACAAAACCATTTCACCGT 59.244 36.000 0.00 0.00 0.00 4.83
451 453 2.482721 GACAATACCTTGTGAACCGTGG 59.517 50.000 0.00 0.00 45.57 4.94
464 466 8.674607 AGATCCATTTCTTTAAACGACAATACC 58.325 33.333 0.00 0.00 0.00 2.73
470 472 7.129109 TGTGAGATCCATTTCTTTAAACGAC 57.871 36.000 0.00 0.00 0.00 4.34
499 501 5.057843 AGACGTATGGAGAGGGTTGTATA 57.942 43.478 0.00 0.00 0.00 1.47
536 538 2.283298 CATCACGAAGTCTTGATGGGG 58.717 52.381 16.24 0.00 44.21 4.96
539 541 2.349590 TGCCATCACGAAGTCTTGATG 58.650 47.619 16.81 16.81 46.16 3.07
545 548 3.932710 TCACTTATTGCCATCACGAAGTC 59.067 43.478 0.00 0.00 41.61 3.01
579 582 2.257691 TAAAGGCTTACGTTGGCACA 57.742 45.000 14.99 0.17 0.00 4.57
630 660 1.710816 TCTTTGCGGGGGACAAAAAT 58.289 45.000 0.00 0.00 36.63 1.82
637 667 1.783071 AAGTTTTTCTTTGCGGGGGA 58.217 45.000 0.00 0.00 31.57 4.81
638 668 3.953712 ATAAGTTTTTCTTTGCGGGGG 57.046 42.857 0.00 0.00 37.56 5.40
639 669 6.258947 TCAAAAATAAGTTTTTCTTTGCGGGG 59.741 34.615 0.00 0.00 43.69 5.73
640 670 7.223777 TCTCAAAAATAAGTTTTTCTTTGCGGG 59.776 33.333 0.00 0.00 43.69 6.13
641 671 8.125728 TCTCAAAAATAAGTTTTTCTTTGCGG 57.874 30.769 0.00 0.00 43.69 5.69
642 672 8.268738 CCTCTCAAAAATAAGTTTTTCTTTGCG 58.731 33.333 0.00 0.00 43.69 4.85
643 673 8.551205 CCCTCTCAAAAATAAGTTTTTCTTTGC 58.449 33.333 0.00 0.00 43.69 3.68
644 674 9.045223 CCCCTCTCAAAAATAAGTTTTTCTTTG 57.955 33.333 0.00 0.00 43.69 2.77
645 675 8.210946 CCCCCTCTCAAAAATAAGTTTTTCTTT 58.789 33.333 0.00 0.00 43.69 2.52
646 676 7.689313 GCCCCCTCTCAAAAATAAGTTTTTCTT 60.689 37.037 0.00 0.00 43.69 2.52
647 677 6.239600 GCCCCCTCTCAAAAATAAGTTTTTCT 60.240 38.462 0.00 0.00 43.69 2.52
648 678 5.932303 GCCCCCTCTCAAAAATAAGTTTTTC 59.068 40.000 0.00 0.00 43.69 2.29
649 679 5.221843 GGCCCCCTCTCAAAAATAAGTTTTT 60.222 40.000 0.00 0.00 45.78 1.94
650 680 4.286032 GGCCCCCTCTCAAAAATAAGTTTT 59.714 41.667 0.00 0.00 40.16 2.43
651 681 3.838317 GGCCCCCTCTCAAAAATAAGTTT 59.162 43.478 0.00 0.00 0.00 2.66
652 682 3.441101 GGCCCCCTCTCAAAAATAAGTT 58.559 45.455 0.00 0.00 0.00 2.66
653 683 2.292257 GGGCCCCCTCTCAAAAATAAGT 60.292 50.000 12.23 0.00 0.00 2.24
654 684 2.023984 AGGGCCCCCTCTCAAAAATAAG 60.024 50.000 21.43 0.00 44.43 1.73
655 685 2.007636 AGGGCCCCCTCTCAAAAATAA 58.992 47.619 21.43 0.00 44.43 1.40
656 686 1.693799 AGGGCCCCCTCTCAAAAATA 58.306 50.000 21.43 0.00 44.43 1.40
657 687 2.503147 AGGGCCCCCTCTCAAAAAT 58.497 52.632 21.43 0.00 44.43 1.82
658 688 4.034625 AGGGCCCCCTCTCAAAAA 57.965 55.556 21.43 0.00 44.43 1.94
667 697 0.853530 ATAGTCATCAAAGGGCCCCC 59.146 55.000 21.43 0.00 0.00 5.40
683 713 8.810041 ACGGAGGGTTATTAAATGTACCTATAG 58.190 37.037 0.00 0.00 0.00 1.31
689 719 5.059161 GGGACGGAGGGTTATTAAATGTAC 58.941 45.833 0.00 0.00 0.00 2.90
691 721 3.524380 TGGGACGGAGGGTTATTAAATGT 59.476 43.478 0.00 0.00 0.00 2.71
693 723 6.518516 TTATGGGACGGAGGGTTATTAAAT 57.481 37.500 0.00 0.00 0.00 1.40
697 727 7.681168 TCTTATATTATGGGACGGAGGGTTATT 59.319 37.037 0.00 0.00 0.00 1.40
698 728 7.194050 TCTTATATTATGGGACGGAGGGTTAT 58.806 38.462 0.00 0.00 0.00 1.89
699 729 6.564099 TCTTATATTATGGGACGGAGGGTTA 58.436 40.000 0.00 0.00 0.00 2.85
700 730 5.408824 TCTTATATTATGGGACGGAGGGTT 58.591 41.667 0.00 0.00 0.00 4.11
703 733 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
704 734 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
706 736 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
707 737 8.605746 TCAAAAACGTTCTTATATTATGGGACG 58.394 33.333 0.00 9.33 0.00 4.79
721 751 9.485206 ACACTACACTAATATCAAAAACGTTCT 57.515 29.630 0.00 0.00 0.00 3.01
749 779 8.852135 TCTGTCCCAAAATATAAGAACGTTTTT 58.148 29.630 9.22 9.22 0.00 1.94
750 780 8.398878 TCTGTCCCAAAATATAAGAACGTTTT 57.601 30.769 0.46 0.00 0.00 2.43
751 781 7.120726 CCTCTGTCCCAAAATATAAGAACGTTT 59.879 37.037 0.46 0.00 0.00 3.60
752 782 6.598064 CCTCTGTCCCAAAATATAAGAACGTT 59.402 38.462 0.00 0.00 0.00 3.99
753 783 6.113411 CCTCTGTCCCAAAATATAAGAACGT 58.887 40.000 0.00 0.00 0.00 3.99
754 784 5.527582 CCCTCTGTCCCAAAATATAAGAACG 59.472 44.000 0.00 0.00 0.00 3.95
755 785 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
756 786 6.126478 CCTCCCTCTGTCCCAAAATATAAGAA 60.126 42.308 0.00 0.00 0.00 2.52
757 787 5.369699 CCTCCCTCTGTCCCAAAATATAAGA 59.630 44.000 0.00 0.00 0.00 2.10
758 788 5.456763 CCCTCCCTCTGTCCCAAAATATAAG 60.457 48.000 0.00 0.00 0.00 1.73
759 789 4.415512 CCCTCCCTCTGTCCCAAAATATAA 59.584 45.833 0.00 0.00 0.00 0.98
760 790 3.980698 CCCTCCCTCTGTCCCAAAATATA 59.019 47.826 0.00 0.00 0.00 0.86
761 791 2.785857 CCCTCCCTCTGTCCCAAAATAT 59.214 50.000 0.00 0.00 0.00 1.28
762 792 2.205342 CCCTCCCTCTGTCCCAAAATA 58.795 52.381 0.00 0.00 0.00 1.40
763 793 1.002857 CCCTCCCTCTGTCCCAAAAT 58.997 55.000 0.00 0.00 0.00 1.82
764 794 0.104144 TCCCTCCCTCTGTCCCAAAA 60.104 55.000 0.00 0.00 0.00 2.44
765 795 0.547712 CTCCCTCCCTCTGTCCCAAA 60.548 60.000 0.00 0.00 0.00 3.28
766 796 1.081092 CTCCCTCCCTCTGTCCCAA 59.919 63.158 0.00 0.00 0.00 4.12
767 797 0.854039 TACTCCCTCCCTCTGTCCCA 60.854 60.000 0.00 0.00 0.00 4.37
768 798 0.105913 CTACTCCCTCCCTCTGTCCC 60.106 65.000 0.00 0.00 0.00 4.46
769 799 0.632294 ACTACTCCCTCCCTCTGTCC 59.368 60.000 0.00 0.00 0.00 4.02
770 800 1.285373 TCACTACTCCCTCCCTCTGTC 59.715 57.143 0.00 0.00 0.00 3.51
771 801 1.383963 TCACTACTCCCTCCCTCTGT 58.616 55.000 0.00 0.00 0.00 3.41
772 802 2.765689 ATCACTACTCCCTCCCTCTG 57.234 55.000 0.00 0.00 0.00 3.35
773 803 6.744802 ATATAATCACTACTCCCTCCCTCT 57.255 41.667 0.00 0.00 0.00 3.69
774 804 7.800300 AAATATAATCACTACTCCCTCCCTC 57.200 40.000 0.00 0.00 0.00 4.30
775 805 9.860393 AATAAATATAATCACTACTCCCTCCCT 57.140 33.333 0.00 0.00 0.00 4.20
825 937 2.093783 GTCCGAACAACTTGGCGATAAG 59.906 50.000 7.60 0.00 0.00 1.73
1260 1377 2.043852 TCGGAGACTCCAGGCTCC 60.044 66.667 21.49 17.70 45.73 4.70
1314 1431 1.474330 TAATCGGCAGCTCAGAGTCA 58.526 50.000 0.00 0.00 0.00 3.41
1320 1437 1.203758 TCGAAGTTAATCGGCAGCTCA 59.796 47.619 0.00 0.00 42.92 4.26
1394 1511 1.409427 GTATGTTCTCCAGGTCCTCGG 59.591 57.143 0.00 0.00 0.00 4.63
1435 1552 2.869101 AAAAGAAGAGGCTGGAGACC 57.131 50.000 0.00 0.00 0.00 3.85
1436 1553 4.000325 GAGAAAAAGAAGAGGCTGGAGAC 59.000 47.826 0.00 0.00 0.00 3.36
1437 1554 3.008485 GGAGAAAAAGAAGAGGCTGGAGA 59.992 47.826 0.00 0.00 0.00 3.71
1438 1555 3.008923 AGGAGAAAAAGAAGAGGCTGGAG 59.991 47.826 0.00 0.00 0.00 3.86
1439 1556 2.982488 AGGAGAAAAAGAAGAGGCTGGA 59.018 45.455 0.00 0.00 0.00 3.86
1440 1557 3.080319 CAGGAGAAAAAGAAGAGGCTGG 58.920 50.000 0.00 0.00 0.00 4.85
1441 1558 3.080319 CCAGGAGAAAAAGAAGAGGCTG 58.920 50.000 0.00 0.00 0.00 4.85
1590 1711 5.570205 TGGTACCACTATCCACAGAAAAA 57.430 39.130 11.60 0.00 0.00 1.94
1621 1748 6.877611 AATTCTACTGACACGGAAACAATT 57.122 33.333 0.00 0.00 0.00 2.32
1633 1760 7.308435 CCTCAAAATGTGGAAATTCTACTGAC 58.692 38.462 10.71 0.00 33.04 3.51
1644 1771 0.178975 ACGCCCCTCAAAATGTGGAA 60.179 50.000 0.21 0.00 33.04 3.53
1645 1772 0.608035 GACGCCCCTCAAAATGTGGA 60.608 55.000 0.21 0.00 33.04 4.02
1661 1793 0.608640 AAACTCCTAGCCTGTGGACG 59.391 55.000 0.00 0.00 0.00 4.79
1673 1806 3.118665 ACAAAAACAGCATGCAAACTCCT 60.119 39.130 21.98 0.00 42.53 3.69
1695 1828 1.807165 GCAACGAGAGCTGCGATCA 60.807 57.895 12.04 0.00 43.86 2.92
1732 1873 5.302360 AGTTCTCGTAGGCAAATACAAACA 58.698 37.500 0.00 0.00 0.00 2.83
1761 1903 4.938226 TGCAACCCGAAAGAAAACAAAAAT 59.062 33.333 0.00 0.00 0.00 1.82
1762 1904 4.315803 TGCAACCCGAAAGAAAACAAAAA 58.684 34.783 0.00 0.00 0.00 1.94
1772 1914 1.135315 CTGCGATGCAACCCGAAAG 59.865 57.895 10.10 3.84 38.41 2.62
1777 1919 0.451783 CTTAACCTGCGATGCAACCC 59.548 55.000 0.00 0.00 38.41 4.11
1778 1920 1.165270 ACTTAACCTGCGATGCAACC 58.835 50.000 0.00 0.00 38.41 3.77
1820 1962 6.680378 GCAGTCTCTTCCTTTCTACATCTCTC 60.680 46.154 0.00 0.00 0.00 3.20
1932 2074 3.660501 AACTTGTACACATCTGCGAGA 57.339 42.857 0.00 0.00 0.00 4.04
1967 2109 5.065090 AGCAACAATTCACAAAAGGAAAAGC 59.935 36.000 0.00 0.00 0.00 3.51
1999 2141 9.288576 GGATCATTACAGATGGATGAAATGTTA 57.711 33.333 0.00 0.00 33.89 2.41
2027 2169 5.997385 ACAACAAAATATCCGGATATTCGC 58.003 37.500 37.69 0.00 41.66 4.70
2075 2769 4.220602 CAGGTAGCATAGCCTTTTTGGTTT 59.779 41.667 0.00 0.00 40.68 3.27
2079 2773 3.427161 GCAGGTAGCATAGCCTTTTTG 57.573 47.619 0.00 0.00 44.79 2.44
2334 3030 9.195411 TGACATGAATTATCAACTTTTGAAAGC 57.805 29.630 0.00 0.00 43.95 3.51
2469 3165 8.148351 AGAACTACTATAACAAGCTGTTCAACA 58.852 33.333 8.40 0.00 40.22 3.33
2497 3193 2.325761 CTTTTACTGAGACCCGTCACG 58.674 52.381 0.00 0.00 0.00 4.35
2498 3194 2.685100 CCTTTTACTGAGACCCGTCAC 58.315 52.381 0.00 0.00 0.00 3.67
2502 3198 0.613777 AGGCCTTTTACTGAGACCCG 59.386 55.000 0.00 0.00 0.00 5.28
2511 3207 9.011095 AGAACTTTAACTAATGAGGCCTTTTAC 57.989 33.333 6.77 0.00 0.00 2.01
2538 3234 2.158971 TGCATGCCGAAGCTATTAGACA 60.159 45.455 16.68 0.00 40.80 3.41
2582 3278 6.777580 AGTTATCCTGTTGTGAATCAAGGTTT 59.222 34.615 0.00 0.00 36.66 3.27
2627 3323 3.421728 AATCCCCCTAGCTTGCCGC 62.422 63.158 0.00 0.00 39.57 6.53
2714 3638 7.037586 AGGTCCAAGACATTCACTATAAAAGGA 60.038 37.037 0.00 0.00 33.68 3.36
2826 3750 6.039382 GGCAGAAAGTAAACAGAAAAGAGGAA 59.961 38.462 0.00 0.00 0.00 3.36
2882 3806 3.666345 AGAAGACTAGGGTGGTCGTAT 57.334 47.619 0.00 0.00 38.58 3.06
2915 3847 1.659794 GCAGTGGCAATTTGGTCGT 59.340 52.632 0.00 0.00 40.72 4.34
3063 3995 6.206634 CCAACGTTTCAATAGTGGGCATATAT 59.793 38.462 0.00 0.00 0.00 0.86
3064 3996 5.529430 CCAACGTTTCAATAGTGGGCATATA 59.471 40.000 0.00 0.00 0.00 0.86
3126 4072 2.161855 CTACCAGCAAGGCAATTCACA 58.838 47.619 0.00 0.00 43.14 3.58
3155 4101 3.768633 GCAGCAGCTATGGTACAGT 57.231 52.632 0.00 0.00 39.23 3.55
3185 4131 0.741927 CGATGTGTGCAGCAGGATGA 60.742 55.000 0.00 0.00 39.69 2.92
3240 4186 7.335171 GGATTTCTTGCTCATTTATTTGCCTTT 59.665 33.333 0.00 0.00 0.00 3.11
3241 4187 6.820152 GGATTTCTTGCTCATTTATTTGCCTT 59.180 34.615 0.00 0.00 0.00 4.35
3252 4199 3.197766 TCCTGTACGGATTTCTTGCTCAT 59.802 43.478 2.31 0.00 36.69 2.90
3347 4296 5.419239 ACAGAGAAGGAAGGAGAATTCAG 57.581 43.478 8.44 0.00 0.00 3.02
3452 4402 2.775384 ACCGGATTGTGCTATTTCCCTA 59.225 45.455 9.46 0.00 0.00 3.53
3478 4428 3.465871 AGCAAAACGCCATCAACAAAAT 58.534 36.364 0.00 0.00 44.04 1.82
3492 4442 7.867403 TCTCAAGTATGATTGGAAAAGCAAAAC 59.133 33.333 0.00 0.00 34.37 2.43
3498 4448 7.452880 TGGTTCTCAAGTATGATTGGAAAAG 57.547 36.000 0.00 0.00 34.37 2.27
3529 4479 2.160205 GCCCAAGTGAAAGTAGGGAAC 58.840 52.381 0.00 0.00 42.25 3.62
3570 4522 4.077982 TGGGAGTAAGGAGATGGATTAGGT 60.078 45.833 0.00 0.00 0.00 3.08
3662 4614 4.031765 CGTGAATCTGAAGTGTTGATACCG 59.968 45.833 0.00 0.00 0.00 4.02
3697 4650 7.622967 GACAAACAATTGGCATAGAGCAGGG 62.623 48.000 10.83 0.00 44.50 4.45
3782 4735 6.603201 CCAGAATAAAGATAAAACTCCCTGCA 59.397 38.462 0.00 0.00 0.00 4.41
3794 4747 8.089625 TCAAGTCCATGTCCAGAATAAAGATA 57.910 34.615 0.00 0.00 0.00 1.98
4064 5215 2.266554 CATCGAGACTGGAGAAGTTGC 58.733 52.381 0.00 0.00 40.07 4.17
4070 5221 1.039785 CCTGCCATCGAGACTGGAGA 61.040 60.000 7.74 0.00 35.70 3.71
4102 5253 2.615447 CTCAACAAGAAGCAGCTGTTGA 59.385 45.455 20.78 20.78 44.13 3.18
4125 5276 2.974148 CAAGCAGTGGCAGCGACA 60.974 61.111 10.50 0.00 44.61 4.35
4217 5368 8.432013 ACAAGATTACAACATCTATGATGGCTA 58.568 33.333 11.55 0.00 35.21 3.93
4238 5389 4.795268 CAACACGAGCTTAGTCTACAAGA 58.205 43.478 0.00 0.00 0.00 3.02
4342 5493 1.203287 TGTGCTTCATCGAGTCTCTGG 59.797 52.381 0.00 0.00 0.00 3.86
4402 5554 7.255590 CCAAGAAAATGTCACAAAGGATACACT 60.256 37.037 0.00 0.00 41.41 3.55
4480 5632 4.485163 GCAGTTACCCATTGTGAATCAAC 58.515 43.478 0.00 0.00 38.97 3.18
4492 5644 4.740922 CAGCATGGCAGTTACCCA 57.259 55.556 0.00 0.00 36.66 4.51
4533 5685 2.177669 CCATGTCTAACCCAATCCCCAT 59.822 50.000 0.00 0.00 0.00 4.00
4534 5686 1.568597 CCATGTCTAACCCAATCCCCA 59.431 52.381 0.00 0.00 0.00 4.96
4609 5761 4.615513 AGGTCCTAGGCATCCACTATATC 58.384 47.826 2.96 0.00 0.00 1.63
4717 5869 4.540824 CAGCAAGTAAACAGAAAGGAAGC 58.459 43.478 0.00 0.00 0.00 3.86
4753 5905 0.108520 GCAGATGGCCATGTGTTTGG 60.109 55.000 35.55 16.89 39.94 3.28
4846 5998 5.055642 TCTCAGTTGTGGATGTTAGTACG 57.944 43.478 0.00 0.00 0.00 3.67
4867 6019 5.283457 AGCTGGTTATCACCTATCACTTC 57.717 43.478 0.00 0.00 44.61 3.01
4876 6028 3.906720 TGAAGGTAGCTGGTTATCACC 57.093 47.619 0.00 0.00 44.56 4.02
4897 6049 6.090763 CAGTTCGTGTTTCTTATCATGTGCTA 59.909 38.462 0.00 0.00 0.00 3.49
4958 6110 7.171678 GTCTGATCTGTTTGCAGGGTAATATAC 59.828 40.741 0.00 0.00 42.78 1.47
5081 6237 5.464057 CAGTGTTACCTTTACATCAACGTCA 59.536 40.000 0.00 0.00 0.00 4.35
5084 6240 6.721571 ATCAGTGTTACCTTTACATCAACG 57.278 37.500 0.00 0.00 0.00 4.10
5121 6277 6.901300 ACCATACTACATAGACTGGAGGAAAA 59.099 38.462 14.40 0.00 40.52 2.29
5128 6379 4.830046 AGCTGACCATACTACATAGACTGG 59.170 45.833 0.00 8.86 35.78 4.00
5133 6391 6.699204 CAGTGAAAGCTGACCATACTACATAG 59.301 42.308 0.00 0.00 38.70 2.23
5142 6400 4.940046 CAGATAACAGTGAAAGCTGACCAT 59.060 41.667 0.00 0.00 39.62 3.55
5161 6419 1.458967 GGCCCCGTAGTACCCAGAT 60.459 63.158 0.00 0.00 0.00 2.90
5170 6428 0.748005 CAATGGAACTGGCCCCGTAG 60.748 60.000 0.00 0.00 0.00 3.51
5187 6445 3.319405 ACAAAATGGGACGTGCATAACAA 59.681 39.130 9.96 0.00 0.00 2.83
5196 6454 6.657541 ACAGAAATACATACAAAATGGGACGT 59.342 34.615 0.00 0.00 0.00 4.34
5254 6514 6.642131 TGCACACAGAATTAGAAAATGAAAGC 59.358 34.615 0.00 0.00 0.00 3.51
5343 6603 1.380246 TGCCACAGGATCAATGCCC 60.380 57.895 0.00 0.00 0.00 5.36
5497 6757 6.198687 TGAAATGCTTTCGACTGTTTTACAG 58.801 36.000 5.33 5.33 45.64 2.74
5551 6811 1.609208 ACATGGCTGAAAGTGGTGAC 58.391 50.000 0.00 0.00 35.30 3.67
5622 6882 7.445402 ACCGATATTCCAATAATGACAGGAAAG 59.555 37.037 0.00 0.00 42.83 2.62
5744 7004 1.971167 GGGTGCTCATTCAACGGCA 60.971 57.895 0.00 0.00 0.00 5.69
5866 7126 8.575649 TCAACTTTCAGTTTCCTAGAAAAAGT 57.424 30.769 0.00 0.00 36.03 2.66
5967 7228 8.891671 ACAAAATACAGAAATGTTGAGCAATT 57.108 26.923 0.00 0.00 30.05 2.32
5986 7247 0.249398 AGAGAGCCGCCGTACAAAAT 59.751 50.000 0.00 0.00 0.00 1.82
5987 7248 0.389426 GAGAGAGCCGCCGTACAAAA 60.389 55.000 0.00 0.00 0.00 2.44
6050 7315 1.136305 ACATTACGGTCTCATGGACGG 59.864 52.381 15.49 15.49 45.35 4.79
6073 7338 6.479001 CAGCATACCGTAGCAGTTTAACTTAT 59.521 38.462 0.00 0.00 0.00 1.73
6138 7411 6.306356 CAGCCTTTTCACAATAGAAAATCACG 59.694 38.462 2.75 0.00 44.01 4.35
6165 7439 1.211190 CAAGAGAAGCTTTGCCGGC 59.789 57.895 22.73 22.73 33.60 6.13
6178 7452 5.814705 AGGATTCAAATACGCTCTTCAAGAG 59.185 40.000 10.38 10.38 45.04 2.85
6208 7482 5.163713 CCATTTTGTTTTTGCGGGAAGAAAA 60.164 36.000 4.23 4.23 34.11 2.29
6299 7672 7.992180 AAGCGGCATTATTGAAAATCTTAAG 57.008 32.000 1.45 0.00 0.00 1.85
6344 10833 4.576053 TGCGCATGAGCTAGTATTTCAAAT 59.424 37.500 22.25 0.00 39.10 2.32
6400 10898 3.124297 GGTCGAATCTGCTGTTCTTTCTG 59.876 47.826 0.00 0.00 0.00 3.02
6423 10925 1.888512 GCCACCTCTTCAAATCTGCAA 59.111 47.619 0.00 0.00 0.00 4.08
6424 10926 1.202915 TGCCACCTCTTCAAATCTGCA 60.203 47.619 0.00 0.00 0.00 4.41
6437 10939 3.958860 GACCTGCCAGTGCCACCT 61.959 66.667 0.00 0.00 36.33 4.00
6473 10983 2.284150 CGTTGTTGTCTTCATGTCACGT 59.716 45.455 0.00 0.00 0.00 4.49
6475 10985 2.031560 TGCGTTGTTGTCTTCATGTCAC 59.968 45.455 0.00 0.00 0.00 3.67
6501 11011 2.126424 GGTGGAGAGCACGTCGAC 60.126 66.667 5.18 5.18 0.00 4.20
6502 11012 1.532604 AATGGTGGAGAGCACGTCGA 61.533 55.000 0.00 0.00 30.78 4.20
6640 11151 0.179150 CTCCTCTCTTGAAGGACGCG 60.179 60.000 3.53 3.53 0.00 6.01
6682 11196 1.385528 GAGTCTTCTCCTCGTCCTCC 58.614 60.000 0.00 0.00 34.87 4.30
6781 11295 0.391661 AGATGATGGACGCGTTGCTT 60.392 50.000 15.53 0.31 0.00 3.91
6798 11312 3.818787 GCGCCGACTTCCCGTAGA 61.819 66.667 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.