Multiple sequence alignment - TraesCS3B01G353200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G353200 chr3B 100.000 4442 0 0 1 4442 563392333 563396774 0.000000e+00 8203
1 TraesCS3B01G353200 chr3B 83.033 389 56 5 4063 4442 6675248 6674861 1.180000e-90 344
2 TraesCS3B01G353200 chr3B 84.932 146 19 3 256 398 225173321 225173176 1.290000e-30 145
3 TraesCS3B01G353200 chr3D 94.323 3558 137 31 401 3914 431287384 431283848 0.000000e+00 5391
4 TraesCS3B01G353200 chr3D 86.389 529 51 10 3916 4437 431283354 431282840 3.880000e-155 558
5 TraesCS3B01G353200 chr3D 84.713 157 20 4 245 398 153507157 153507002 2.140000e-33 154
6 TraesCS3B01G353200 chr3A 93.837 3229 125 33 401 3610 568663086 568666259 0.000000e+00 4793
7 TraesCS3B01G353200 chr3A 86.007 536 47 14 3914 4442 568666900 568667414 2.340000e-152 549
8 TraesCS3B01G353200 chr3A 94.118 306 12 4 3609 3912 568666316 568666617 1.130000e-125 460
9 TraesCS3B01G353200 chr1A 83.304 563 83 7 2595 3147 510829743 510829182 3.960000e-140 508
10 TraesCS3B01G353200 chr7D 85.641 390 44 9 4062 4442 603664602 603664216 2.490000e-107 399
11 TraesCS3B01G353200 chr7D 79.545 176 32 4 222 395 45633345 45633172 6.030000e-24 122
12 TraesCS3B01G353200 chr7A 87.774 319 37 2 4126 4442 628641853 628642171 5.430000e-99 372
13 TraesCS3B01G353200 chr5B 83.290 389 56 4 4062 4442 679764222 679763835 2.540000e-92 350
14 TraesCS3B01G353200 chr5B 82.955 176 21 6 222 395 556139234 556139066 2.770000e-32 150
15 TraesCS3B01G353200 chr5D 82.821 390 58 6 4062 4442 55048119 55048508 1.530000e-89 340
16 TraesCS3B01G353200 chr6B 82.353 391 59 6 4061 4441 17365947 17366337 9.210000e-87 331
17 TraesCS3B01G353200 chr4D 81.728 405 65 5 4045 4440 304577712 304577308 3.310000e-86 329
18 TraesCS3B01G353200 chrUn 84.358 179 20 6 219 395 88784734 88784906 7.640000e-38 169
19 TraesCS3B01G353200 chrUn 78.495 186 35 5 2880 3063 18059527 18059709 2.810000e-22 117
20 TraesCS3B01G353200 chr4A 84.571 175 21 5 222 392 646311833 646312005 7.640000e-38 169
21 TraesCS3B01G353200 chr6A 84.358 179 19 5 222 398 169514948 169514777 2.750000e-37 167
22 TraesCS3B01G353200 chr2D 83.237 173 25 4 222 393 23479679 23479848 5.950000e-34 156
23 TraesCS3B01G353200 chr2A 86.301 146 16 3 251 393 746983240 746983384 5.950000e-34 156


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G353200 chr3B 563392333 563396774 4441 False 8203.0 8203 100.000000 1 4442 1 chr3B.!!$F1 4441
1 TraesCS3B01G353200 chr3D 431282840 431287384 4544 True 2974.5 5391 90.356000 401 4437 2 chr3D.!!$R2 4036
2 TraesCS3B01G353200 chr3A 568663086 568667414 4328 False 1934.0 4793 91.320667 401 4442 3 chr3A.!!$F1 4041
3 TraesCS3B01G353200 chr1A 510829182 510829743 561 True 508.0 508 83.304000 2595 3147 1 chr1A.!!$R1 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
310 311 0.100503 AAGTTGCCGTGCTTCACAAC 59.899 50.0 0.00 0.00 42.08 3.32 F
1557 1595 0.029567 TCGCGCAATGGTTCGTTTTT 59.970 45.0 8.75 0.00 0.00 1.94 F
2483 2521 0.037882 CAGGTATGGCTCGATCGCAT 60.038 55.0 11.09 10.91 0.00 4.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2273 2311 0.536460 GGTTGAGGTTCAGGCCGAAA 60.536 55.0 10.87 0.35 34.69 3.46 R
3100 3147 0.107312 CTGAAGTAGCTGGCCTGCAT 60.107 55.0 32.96 20.91 34.99 3.96 R
4198 4819 0.036164 GTCACCATACACCTGGCACA 59.964 55.0 0.00 0.00 40.15 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.691409 TAGGAAAGATGAGTTGCGGG 57.309 50.000 0.00 0.00 0.00 6.13
21 22 0.693049 AGGAAAGATGAGTTGCGGGT 59.307 50.000 0.00 0.00 0.00 5.28
22 23 1.087501 GGAAAGATGAGTTGCGGGTC 58.912 55.000 0.00 0.00 0.00 4.46
23 24 1.087501 GAAAGATGAGTTGCGGGTCC 58.912 55.000 0.00 0.00 0.00 4.46
24 25 0.400213 AAAGATGAGTTGCGGGTCCA 59.600 50.000 0.00 0.00 0.00 4.02
25 26 0.400213 AAGATGAGTTGCGGGTCCAA 59.600 50.000 0.00 0.00 0.00 3.53
26 27 0.400213 AGATGAGTTGCGGGTCCAAA 59.600 50.000 0.00 0.00 0.00 3.28
27 28 0.521735 GATGAGTTGCGGGTCCAAAC 59.478 55.000 0.00 0.00 0.00 2.93
28 29 1.234615 ATGAGTTGCGGGTCCAAACG 61.235 55.000 0.00 0.00 0.00 3.60
29 30 1.890510 GAGTTGCGGGTCCAAACGT 60.891 57.895 0.00 0.00 0.00 3.99
30 31 0.600782 GAGTTGCGGGTCCAAACGTA 60.601 55.000 0.00 0.00 0.00 3.57
31 32 0.601841 AGTTGCGGGTCCAAACGTAG 60.602 55.000 0.00 0.00 0.00 3.51
32 33 1.962306 TTGCGGGTCCAAACGTAGC 60.962 57.895 0.00 0.00 0.00 3.58
33 34 2.357760 GCGGGTCCAAACGTAGCA 60.358 61.111 0.00 0.00 0.00 3.49
34 35 1.743995 GCGGGTCCAAACGTAGCAT 60.744 57.895 0.00 0.00 0.00 3.79
35 36 1.303091 GCGGGTCCAAACGTAGCATT 61.303 55.000 0.00 0.00 0.00 3.56
36 37 1.161843 CGGGTCCAAACGTAGCATTT 58.838 50.000 0.00 0.00 0.00 2.32
37 38 1.135803 CGGGTCCAAACGTAGCATTTG 60.136 52.381 0.00 0.00 36.90 2.32
38 39 2.156098 GGGTCCAAACGTAGCATTTGA 58.844 47.619 0.00 0.00 39.01 2.69
39 40 2.161609 GGGTCCAAACGTAGCATTTGAG 59.838 50.000 0.00 0.00 39.01 3.02
40 41 3.071479 GGTCCAAACGTAGCATTTGAGA 58.929 45.455 0.00 0.00 39.01 3.27
41 42 3.125316 GGTCCAAACGTAGCATTTGAGAG 59.875 47.826 0.00 0.00 39.01 3.20
42 43 3.746492 GTCCAAACGTAGCATTTGAGAGT 59.254 43.478 0.00 0.00 39.01 3.24
43 44 4.213482 GTCCAAACGTAGCATTTGAGAGTT 59.787 41.667 0.00 0.00 39.01 3.01
44 45 4.451096 TCCAAACGTAGCATTTGAGAGTTC 59.549 41.667 0.00 0.00 39.01 3.01
45 46 4.213270 CCAAACGTAGCATTTGAGAGTTCA 59.787 41.667 0.00 0.00 39.01 3.18
46 47 5.377358 CAAACGTAGCATTTGAGAGTTCAG 58.623 41.667 0.00 0.00 39.01 3.02
47 48 4.258702 ACGTAGCATTTGAGAGTTCAGT 57.741 40.909 0.00 0.00 34.15 3.41
48 49 4.632153 ACGTAGCATTTGAGAGTTCAGTT 58.368 39.130 0.00 0.00 34.15 3.16
49 50 5.057149 ACGTAGCATTTGAGAGTTCAGTTT 58.943 37.500 0.00 0.00 34.15 2.66
50 51 5.177696 ACGTAGCATTTGAGAGTTCAGTTTC 59.822 40.000 0.00 0.00 34.15 2.78
51 52 5.177511 CGTAGCATTTGAGAGTTCAGTTTCA 59.822 40.000 0.00 0.00 34.15 2.69
52 53 5.429957 AGCATTTGAGAGTTCAGTTTCAC 57.570 39.130 0.00 0.00 34.15 3.18
53 54 4.883585 AGCATTTGAGAGTTCAGTTTCACA 59.116 37.500 0.00 0.00 34.15 3.58
54 55 5.533903 AGCATTTGAGAGTTCAGTTTCACAT 59.466 36.000 0.00 0.00 34.15 3.21
55 56 5.855395 GCATTTGAGAGTTCAGTTTCACATC 59.145 40.000 0.00 0.00 34.15 3.06
56 57 6.513884 GCATTTGAGAGTTCAGTTTCACATCA 60.514 38.462 0.00 0.00 34.15 3.07
57 58 5.991328 TTGAGAGTTCAGTTTCACATCAC 57.009 39.130 0.00 0.00 34.15 3.06
58 59 5.022282 TGAGAGTTCAGTTTCACATCACA 57.978 39.130 0.00 0.00 0.00 3.58
59 60 5.614308 TGAGAGTTCAGTTTCACATCACAT 58.386 37.500 0.00 0.00 0.00 3.21
60 61 5.467735 TGAGAGTTCAGTTTCACATCACATG 59.532 40.000 0.00 0.00 0.00 3.21
61 62 4.214971 AGAGTTCAGTTTCACATCACATGC 59.785 41.667 0.00 0.00 0.00 4.06
62 63 3.254166 AGTTCAGTTTCACATCACATGCC 59.746 43.478 0.00 0.00 0.00 4.40
63 64 2.861274 TCAGTTTCACATCACATGCCA 58.139 42.857 0.00 0.00 0.00 4.92
64 65 2.553602 TCAGTTTCACATCACATGCCAC 59.446 45.455 0.00 0.00 0.00 5.01
65 66 2.293955 CAGTTTCACATCACATGCCACA 59.706 45.455 0.00 0.00 0.00 4.17
66 67 3.057104 CAGTTTCACATCACATGCCACAT 60.057 43.478 0.00 0.00 0.00 3.21
67 68 3.575256 AGTTTCACATCACATGCCACATT 59.425 39.130 0.00 0.00 0.00 2.71
68 69 3.853831 TTCACATCACATGCCACATTC 57.146 42.857 0.00 0.00 0.00 2.67
69 70 1.738908 TCACATCACATGCCACATTCG 59.261 47.619 0.00 0.00 0.00 3.34
70 71 1.469703 CACATCACATGCCACATTCGT 59.530 47.619 0.00 0.00 0.00 3.85
71 72 2.095110 CACATCACATGCCACATTCGTT 60.095 45.455 0.00 0.00 0.00 3.85
72 73 2.557924 ACATCACATGCCACATTCGTTT 59.442 40.909 0.00 0.00 0.00 3.60
73 74 3.005684 ACATCACATGCCACATTCGTTTT 59.994 39.130 0.00 0.00 0.00 2.43
74 75 3.281341 TCACATGCCACATTCGTTTTC 57.719 42.857 0.00 0.00 0.00 2.29
75 76 1.978097 CACATGCCACATTCGTTTTCG 59.022 47.619 0.00 0.00 45.64 3.46
76 77 1.068610 ACATGCCACATTCGTTTTCGG 60.069 47.619 0.00 0.00 44.25 4.30
77 78 0.525761 ATGCCACATTCGTTTTCGGG 59.474 50.000 0.00 0.00 44.25 5.14
78 79 1.443702 GCCACATTCGTTTTCGGGC 60.444 57.895 0.00 0.00 44.25 6.13
79 80 1.953017 CCACATTCGTTTTCGGGCA 59.047 52.632 0.00 0.00 44.25 5.36
80 81 0.525761 CCACATTCGTTTTCGGGCAT 59.474 50.000 0.00 0.00 44.25 4.40
81 82 1.740585 CCACATTCGTTTTCGGGCATA 59.259 47.619 0.00 0.00 44.25 3.14
82 83 2.162608 CCACATTCGTTTTCGGGCATAA 59.837 45.455 0.00 0.00 44.25 1.90
83 84 3.425404 CACATTCGTTTTCGGGCATAAG 58.575 45.455 0.00 0.00 44.25 1.73
84 85 3.078837 ACATTCGTTTTCGGGCATAAGT 58.921 40.909 0.00 0.00 44.25 2.24
85 86 4.093703 CACATTCGTTTTCGGGCATAAGTA 59.906 41.667 0.00 0.00 44.25 2.24
86 87 4.331717 ACATTCGTTTTCGGGCATAAGTAG 59.668 41.667 0.00 0.00 44.25 2.57
87 88 3.598019 TCGTTTTCGGGCATAAGTAGT 57.402 42.857 0.00 0.00 44.25 2.73
88 89 3.929094 TCGTTTTCGGGCATAAGTAGTT 58.071 40.909 0.00 0.00 44.25 2.24
89 90 5.070770 TCGTTTTCGGGCATAAGTAGTTA 57.929 39.130 0.00 0.00 44.25 2.24
90 91 5.477510 TCGTTTTCGGGCATAAGTAGTTAA 58.522 37.500 0.00 0.00 44.25 2.01
91 92 5.348451 TCGTTTTCGGGCATAAGTAGTTAAC 59.652 40.000 0.00 0.00 44.25 2.01
92 93 5.446340 CGTTTTCGGGCATAAGTAGTTAACC 60.446 44.000 0.88 0.00 39.94 2.85
93 94 3.825143 TCGGGCATAAGTAGTTAACCC 57.175 47.619 16.72 16.72 36.12 4.11
94 95 3.106054 TCGGGCATAAGTAGTTAACCCA 58.894 45.455 22.52 12.47 38.01 4.51
95 96 3.712733 TCGGGCATAAGTAGTTAACCCAT 59.287 43.478 22.52 0.00 38.01 4.00
96 97 4.164604 TCGGGCATAAGTAGTTAACCCATT 59.835 41.667 22.52 0.00 38.01 3.16
97 98 4.885325 CGGGCATAAGTAGTTAACCCATTT 59.115 41.667 22.52 0.00 38.01 2.32
98 99 5.220970 CGGGCATAAGTAGTTAACCCATTTG 60.221 44.000 22.52 9.62 38.01 2.32
99 100 5.068591 GGGCATAAGTAGTTAACCCATTTGG 59.931 44.000 19.85 0.00 38.02 3.28
116 117 7.592885 CCATTTGGGTAAGAAGAATGATCAT 57.407 36.000 1.18 1.18 31.15 2.45
117 118 7.655490 CCATTTGGGTAAGAAGAATGATCATC 58.345 38.462 9.06 2.96 31.15 2.92
118 119 7.255730 CCATTTGGGTAAGAAGAATGATCATCC 60.256 40.741 9.06 0.00 31.15 3.51
119 120 6.581388 TTGGGTAAGAAGAATGATCATCCT 57.419 37.500 9.06 0.00 0.00 3.24
120 121 5.933617 TGGGTAAGAAGAATGATCATCCTG 58.066 41.667 9.06 0.00 0.00 3.86
121 122 4.759183 GGGTAAGAAGAATGATCATCCTGC 59.241 45.833 9.06 0.00 0.00 4.85
122 123 4.450419 GGTAAGAAGAATGATCATCCTGCG 59.550 45.833 9.06 0.00 0.00 5.18
123 124 3.834489 AGAAGAATGATCATCCTGCGT 57.166 42.857 9.06 0.00 0.00 5.24
124 125 4.148128 AGAAGAATGATCATCCTGCGTT 57.852 40.909 9.06 0.00 0.00 4.84
125 126 5.282055 AGAAGAATGATCATCCTGCGTTA 57.718 39.130 9.06 0.00 0.00 3.18
126 127 5.674525 AGAAGAATGATCATCCTGCGTTAA 58.325 37.500 9.06 0.00 0.00 2.01
127 128 6.115446 AGAAGAATGATCATCCTGCGTTAAA 58.885 36.000 9.06 0.00 0.00 1.52
128 129 5.741388 AGAATGATCATCCTGCGTTAAAC 57.259 39.130 9.06 0.00 0.00 2.01
129 130 4.576463 AGAATGATCATCCTGCGTTAAACC 59.424 41.667 9.06 0.00 0.00 3.27
130 131 3.627395 TGATCATCCTGCGTTAAACCT 57.373 42.857 0.00 0.00 0.00 3.50
131 132 3.270027 TGATCATCCTGCGTTAAACCTG 58.730 45.455 0.00 0.00 0.00 4.00
132 133 2.851263 TCATCCTGCGTTAAACCTGT 57.149 45.000 0.00 0.00 0.00 4.00
133 134 3.134574 TCATCCTGCGTTAAACCTGTT 57.865 42.857 0.00 0.00 0.00 3.16
134 135 3.482436 TCATCCTGCGTTAAACCTGTTT 58.518 40.909 0.45 0.45 36.63 2.83
135 136 3.886505 TCATCCTGCGTTAAACCTGTTTT 59.113 39.130 0.00 0.00 34.23 2.43
136 137 3.974871 TCCTGCGTTAAACCTGTTTTC 57.025 42.857 0.00 0.00 34.23 2.29
137 138 2.288458 TCCTGCGTTAAACCTGTTTTCG 59.712 45.455 0.00 7.83 34.23 3.46
138 139 2.603652 CCTGCGTTAAACCTGTTTTCGG 60.604 50.000 15.84 0.00 34.23 4.30
146 147 3.944871 CCTGTTTTCGGGCATATGC 57.055 52.632 19.79 19.79 39.73 3.14
147 148 1.392589 CCTGTTTTCGGGCATATGCT 58.607 50.000 26.12 0.00 39.73 3.79
148 149 1.334869 CCTGTTTTCGGGCATATGCTC 59.665 52.381 26.12 22.39 39.73 4.26
149 150 1.334869 CTGTTTTCGGGCATATGCTCC 59.665 52.381 26.12 22.46 38.61 4.70
154 155 4.683432 GGGCATATGCTCCGAGAC 57.317 61.111 26.12 8.36 41.70 3.36
155 156 1.748403 GGGCATATGCTCCGAGACA 59.252 57.895 26.12 0.00 41.70 3.41
156 157 0.106708 GGGCATATGCTCCGAGACAA 59.893 55.000 26.12 0.00 41.70 3.18
157 158 1.271054 GGGCATATGCTCCGAGACAAT 60.271 52.381 26.12 0.00 41.70 2.71
158 159 2.498167 GGCATATGCTCCGAGACAATT 58.502 47.619 26.12 0.00 41.70 2.32
159 160 2.225019 GGCATATGCTCCGAGACAATTG 59.775 50.000 26.12 3.24 41.70 2.32
160 161 2.874701 GCATATGCTCCGAGACAATTGT 59.125 45.455 20.64 11.78 38.21 2.71
161 162 4.058124 GCATATGCTCCGAGACAATTGTA 58.942 43.478 20.64 0.00 38.21 2.41
162 163 4.151335 GCATATGCTCCGAGACAATTGTAG 59.849 45.833 20.64 6.00 38.21 2.74
163 164 5.532557 CATATGCTCCGAGACAATTGTAGA 58.467 41.667 11.95 5.58 0.00 2.59
164 165 3.953712 TGCTCCGAGACAATTGTAGAA 57.046 42.857 11.95 0.00 0.00 2.10
165 166 4.471904 TGCTCCGAGACAATTGTAGAAT 57.528 40.909 11.95 0.00 0.00 2.40
166 167 4.183865 TGCTCCGAGACAATTGTAGAATG 58.816 43.478 11.95 2.15 0.00 2.67
167 168 3.557595 GCTCCGAGACAATTGTAGAATGG 59.442 47.826 11.95 9.45 0.00 3.16
168 169 4.759782 CTCCGAGACAATTGTAGAATGGT 58.240 43.478 11.95 0.00 0.00 3.55
169 170 5.681437 GCTCCGAGACAATTGTAGAATGGTA 60.681 44.000 11.95 0.43 0.00 3.25
170 171 5.657474 TCCGAGACAATTGTAGAATGGTAC 58.343 41.667 11.95 0.00 0.00 3.34
171 172 4.809426 CCGAGACAATTGTAGAATGGTACC 59.191 45.833 11.95 4.43 0.00 3.34
172 173 5.416083 CGAGACAATTGTAGAATGGTACCA 58.584 41.667 18.99 18.99 0.00 3.25
173 174 5.291128 CGAGACAATTGTAGAATGGTACCAC 59.709 44.000 19.09 5.43 0.00 4.16
174 175 6.374417 AGACAATTGTAGAATGGTACCACT 57.626 37.500 19.09 13.60 0.00 4.00
175 176 6.407202 AGACAATTGTAGAATGGTACCACTC 58.593 40.000 19.09 17.21 0.00 3.51
176 177 6.013725 AGACAATTGTAGAATGGTACCACTCA 60.014 38.462 24.36 12.80 0.00 3.41
177 178 6.173339 ACAATTGTAGAATGGTACCACTCAG 58.827 40.000 24.36 8.01 0.00 3.35
178 179 6.013725 ACAATTGTAGAATGGTACCACTCAGA 60.014 38.462 24.36 9.77 0.00 3.27
179 180 6.814954 ATTGTAGAATGGTACCACTCAGAT 57.185 37.500 24.36 7.43 0.00 2.90
180 181 5.854010 TGTAGAATGGTACCACTCAGATC 57.146 43.478 24.36 12.42 0.00 2.75
181 182 4.338400 TGTAGAATGGTACCACTCAGATCG 59.662 45.833 24.36 0.00 0.00 3.69
182 183 2.695666 AGAATGGTACCACTCAGATCGG 59.304 50.000 24.36 0.00 0.00 4.18
183 184 1.414158 ATGGTACCACTCAGATCGGG 58.586 55.000 19.09 0.00 0.00 5.14
184 185 0.686441 TGGTACCACTCAGATCGGGG 60.686 60.000 11.60 0.00 0.00 5.73
185 186 1.400530 GGTACCACTCAGATCGGGGG 61.401 65.000 7.15 0.43 0.00 5.40
186 187 0.396695 GTACCACTCAGATCGGGGGA 60.397 60.000 10.76 0.00 0.00 4.81
187 188 0.337082 TACCACTCAGATCGGGGGAA 59.663 55.000 10.76 0.00 0.00 3.97
188 189 0.978146 ACCACTCAGATCGGGGGAAG 60.978 60.000 10.76 0.00 0.00 3.46
189 190 0.978146 CCACTCAGATCGGGGGAAGT 60.978 60.000 0.00 0.00 0.00 3.01
190 191 1.688311 CCACTCAGATCGGGGGAAGTA 60.688 57.143 0.00 0.00 0.00 2.24
191 192 2.320781 CACTCAGATCGGGGGAAGTAT 58.679 52.381 0.00 0.00 0.00 2.12
192 193 2.700897 CACTCAGATCGGGGGAAGTATT 59.299 50.000 0.00 0.00 0.00 1.89
193 194 3.895656 CACTCAGATCGGGGGAAGTATTA 59.104 47.826 0.00 0.00 0.00 0.98
194 195 4.528596 CACTCAGATCGGGGGAAGTATTAT 59.471 45.833 0.00 0.00 0.00 1.28
195 196 5.715279 CACTCAGATCGGGGGAAGTATTATA 59.285 44.000 0.00 0.00 0.00 0.98
196 197 5.715753 ACTCAGATCGGGGGAAGTATTATAC 59.284 44.000 0.00 0.00 0.00 1.47
197 198 5.900437 TCAGATCGGGGGAAGTATTATACT 58.100 41.667 0.00 0.00 41.73 2.12
216 217 8.990163 TTATACTTCCCAAATGATAAGTTCCC 57.010 34.615 0.00 0.00 34.23 3.97
217 218 4.610333 ACTTCCCAAATGATAAGTTCCCC 58.390 43.478 0.00 0.00 0.00 4.81
218 219 4.045334 ACTTCCCAAATGATAAGTTCCCCA 59.955 41.667 0.00 0.00 0.00 4.96
219 220 4.898014 TCCCAAATGATAAGTTCCCCAT 57.102 40.909 0.00 0.00 0.00 4.00
220 221 4.545678 TCCCAAATGATAAGTTCCCCATG 58.454 43.478 0.00 0.00 0.00 3.66
221 222 4.016666 TCCCAAATGATAAGTTCCCCATGT 60.017 41.667 0.00 0.00 0.00 3.21
222 223 4.716287 CCCAAATGATAAGTTCCCCATGTT 59.284 41.667 0.00 0.00 0.00 2.71
223 224 5.189539 CCCAAATGATAAGTTCCCCATGTTT 59.810 40.000 0.00 0.00 0.00 2.83
224 225 6.382570 CCCAAATGATAAGTTCCCCATGTTTA 59.617 38.462 0.00 0.00 0.00 2.01
225 226 7.264947 CCAAATGATAAGTTCCCCATGTTTAC 58.735 38.462 0.00 0.00 0.00 2.01
226 227 7.093552 CCAAATGATAAGTTCCCCATGTTTACA 60.094 37.037 0.00 0.00 0.00 2.41
227 228 8.310382 CAAATGATAAGTTCCCCATGTTTACAA 58.690 33.333 0.00 0.00 0.00 2.41
228 229 6.827586 TGATAAGTTCCCCATGTTTACAAC 57.172 37.500 0.00 0.00 0.00 3.32
229 230 6.548321 TGATAAGTTCCCCATGTTTACAACT 58.452 36.000 0.00 0.00 0.00 3.16
230 231 7.691213 TGATAAGTTCCCCATGTTTACAACTA 58.309 34.615 0.00 0.00 0.00 2.24
231 232 8.164733 TGATAAGTTCCCCATGTTTACAACTAA 58.835 33.333 0.00 0.00 0.00 2.24
232 233 8.943594 ATAAGTTCCCCATGTTTACAACTAAA 57.056 30.769 0.00 0.00 0.00 1.85
233 234 7.663043 AAGTTCCCCATGTTTACAACTAAAA 57.337 32.000 0.00 0.00 0.00 1.52
234 235 7.849322 AGTTCCCCATGTTTACAACTAAAAT 57.151 32.000 0.00 0.00 0.00 1.82
235 236 8.257602 AGTTCCCCATGTTTACAACTAAAATT 57.742 30.769 0.00 0.00 0.00 1.82
236 237 8.147704 AGTTCCCCATGTTTACAACTAAAATTG 58.852 33.333 0.00 0.00 35.59 2.32
237 238 6.459923 TCCCCATGTTTACAACTAAAATTGC 58.540 36.000 0.00 0.00 32.47 3.56
238 239 5.641636 CCCCATGTTTACAACTAAAATTGCC 59.358 40.000 0.00 0.00 32.47 4.52
239 240 6.226787 CCCATGTTTACAACTAAAATTGCCA 58.773 36.000 0.00 0.00 32.47 4.92
240 241 6.878389 CCCATGTTTACAACTAAAATTGCCAT 59.122 34.615 0.00 0.00 32.47 4.40
241 242 7.064490 CCCATGTTTACAACTAAAATTGCCATC 59.936 37.037 0.00 0.00 32.47 3.51
242 243 7.818930 CCATGTTTACAACTAAAATTGCCATCT 59.181 33.333 0.00 0.00 32.47 2.90
243 244 8.649841 CATGTTTACAACTAAAATTGCCATCTG 58.350 33.333 0.00 0.00 32.47 2.90
244 245 7.946207 TGTTTACAACTAAAATTGCCATCTGA 58.054 30.769 0.00 0.00 32.47 3.27
245 246 8.417106 TGTTTACAACTAAAATTGCCATCTGAA 58.583 29.630 0.00 0.00 32.47 3.02
246 247 9.255304 GTTTACAACTAAAATTGCCATCTGAAA 57.745 29.630 0.00 0.00 32.47 2.69
247 248 9.823647 TTTACAACTAAAATTGCCATCTGAAAA 57.176 25.926 0.00 0.00 32.47 2.29
248 249 9.823647 TTACAACTAAAATTGCCATCTGAAAAA 57.176 25.926 0.00 0.00 32.47 1.94
274 275 9.776158 AAAAACGAAACCCAAAAATATTGAAAC 57.224 25.926 0.00 0.00 0.00 2.78
275 276 8.725405 AAACGAAACCCAAAAATATTGAAACT 57.275 26.923 0.00 0.00 0.00 2.66
276 277 8.725405 AACGAAACCCAAAAATATTGAAACTT 57.275 26.923 0.00 0.00 0.00 2.66
277 278 8.137210 ACGAAACCCAAAAATATTGAAACTTG 57.863 30.769 0.00 0.00 0.00 3.16
278 279 7.766738 ACGAAACCCAAAAATATTGAAACTTGT 59.233 29.630 0.00 0.00 0.00 3.16
279 280 8.272866 CGAAACCCAAAAATATTGAAACTTGTC 58.727 33.333 0.00 0.00 0.00 3.18
280 281 8.445275 AAACCCAAAAATATTGAAACTTGTCC 57.555 30.769 0.00 0.00 0.00 4.02
281 282 6.530120 ACCCAAAAATATTGAAACTTGTCCC 58.470 36.000 0.00 0.00 0.00 4.46
282 283 5.937540 CCCAAAAATATTGAAACTTGTCCCC 59.062 40.000 0.00 0.00 0.00 4.81
283 284 5.937540 CCAAAAATATTGAAACTTGTCCCCC 59.062 40.000 0.00 0.00 0.00 5.40
284 285 6.465035 CCAAAAATATTGAAACTTGTCCCCCA 60.465 38.462 0.00 0.00 0.00 4.96
285 286 6.755542 AAAATATTGAAACTTGTCCCCCAA 57.244 33.333 0.00 0.00 0.00 4.12
286 287 6.755542 AAATATTGAAACTTGTCCCCCAAA 57.244 33.333 0.00 0.00 31.20 3.28
287 288 5.738619 ATATTGAAACTTGTCCCCCAAAC 57.261 39.130 0.00 0.00 31.20 2.93
288 289 2.534042 TGAAACTTGTCCCCCAAACA 57.466 45.000 0.00 0.00 31.20 2.83
289 290 2.821437 TGAAACTTGTCCCCCAAACAA 58.179 42.857 0.00 0.00 35.44 2.83
290 291 3.173965 TGAAACTTGTCCCCCAAACAAA 58.826 40.909 0.00 0.00 36.27 2.83
291 292 3.583086 TGAAACTTGTCCCCCAAACAAAA 59.417 39.130 0.00 0.00 36.27 2.44
292 293 4.041691 TGAAACTTGTCCCCCAAACAAAAA 59.958 37.500 0.00 0.00 36.27 1.94
293 294 3.904800 ACTTGTCCCCCAAACAAAAAG 57.095 42.857 0.00 0.00 36.27 2.27
294 295 3.178046 ACTTGTCCCCCAAACAAAAAGT 58.822 40.909 0.00 0.00 36.27 2.66
295 296 3.585289 ACTTGTCCCCCAAACAAAAAGTT 59.415 39.130 0.00 0.00 43.89 2.66
296 297 3.618690 TGTCCCCCAAACAAAAAGTTG 57.381 42.857 0.00 0.00 41.19 3.16
297 298 2.285083 GTCCCCCAAACAAAAAGTTGC 58.715 47.619 0.00 0.00 41.19 4.17
298 299 1.210722 TCCCCCAAACAAAAAGTTGCC 59.789 47.619 0.00 0.00 41.19 4.52
299 300 1.294857 CCCCAAACAAAAAGTTGCCG 58.705 50.000 0.00 0.00 41.19 5.69
300 301 1.406205 CCCCAAACAAAAAGTTGCCGT 60.406 47.619 0.00 0.00 41.19 5.68
301 302 1.663135 CCCAAACAAAAAGTTGCCGTG 59.337 47.619 0.00 0.00 41.19 4.94
302 303 1.061857 CCAAACAAAAAGTTGCCGTGC 59.938 47.619 0.00 0.00 41.19 5.34
303 304 1.999024 CAAACAAAAAGTTGCCGTGCT 59.001 42.857 0.00 0.00 41.19 4.40
304 305 2.378445 AACAAAAAGTTGCCGTGCTT 57.622 40.000 0.00 0.00 39.49 3.91
305 306 1.921243 ACAAAAAGTTGCCGTGCTTC 58.079 45.000 0.00 0.00 38.39 3.86
306 307 1.203523 ACAAAAAGTTGCCGTGCTTCA 59.796 42.857 0.00 0.00 38.39 3.02
307 308 1.587946 CAAAAAGTTGCCGTGCTTCAC 59.412 47.619 0.00 0.00 0.00 3.18
308 309 0.814457 AAAAGTTGCCGTGCTTCACA 59.186 45.000 0.00 0.00 33.40 3.58
309 310 0.814457 AAAGTTGCCGTGCTTCACAA 59.186 45.000 0.00 0.00 33.40 3.33
310 311 0.100503 AAGTTGCCGTGCTTCACAAC 59.899 50.000 0.00 0.00 42.08 3.32
311 312 0.748005 AGTTGCCGTGCTTCACAACT 60.748 50.000 9.10 9.10 45.86 3.16
312 313 0.941542 GTTGCCGTGCTTCACAACTA 59.058 50.000 0.00 0.00 39.39 2.24
313 314 1.332375 GTTGCCGTGCTTCACAACTAA 59.668 47.619 0.00 0.00 39.39 2.24
314 315 1.669604 TGCCGTGCTTCACAACTAAA 58.330 45.000 0.00 0.00 33.40 1.85
315 316 1.601903 TGCCGTGCTTCACAACTAAAG 59.398 47.619 0.00 0.00 33.40 1.85
316 317 1.602377 GCCGTGCTTCACAACTAAAGT 59.398 47.619 0.00 0.00 33.40 2.66
317 318 2.032924 GCCGTGCTTCACAACTAAAGTT 59.967 45.455 0.00 0.00 39.12 2.66
332 333 7.703058 AACTAAAGTTGTCATCCCCAAATAG 57.297 36.000 0.00 0.00 36.80 1.73
333 334 5.652452 ACTAAAGTTGTCATCCCCAAATAGC 59.348 40.000 0.00 0.00 0.00 2.97
334 335 4.322057 AAGTTGTCATCCCCAAATAGCT 57.678 40.909 0.00 0.00 0.00 3.32
335 336 5.450818 AAGTTGTCATCCCCAAATAGCTA 57.549 39.130 0.00 0.00 0.00 3.32
336 337 5.450818 AGTTGTCATCCCCAAATAGCTAA 57.549 39.130 0.00 0.00 0.00 3.09
337 338 5.826643 AGTTGTCATCCCCAAATAGCTAAA 58.173 37.500 0.00 0.00 0.00 1.85
338 339 5.888161 AGTTGTCATCCCCAAATAGCTAAAG 59.112 40.000 0.00 0.00 0.00 1.85
339 340 5.450818 TGTCATCCCCAAATAGCTAAAGT 57.549 39.130 0.00 0.00 0.00 2.66
340 341 5.826643 TGTCATCCCCAAATAGCTAAAGTT 58.173 37.500 0.00 0.00 0.00 2.66
341 342 5.652014 TGTCATCCCCAAATAGCTAAAGTTG 59.348 40.000 0.00 2.94 0.00 3.16
342 343 4.644685 TCATCCCCAAATAGCTAAAGTTGC 59.355 41.667 0.00 0.00 0.00 4.17
343 344 3.361786 TCCCCAAATAGCTAAAGTTGCC 58.638 45.455 0.00 0.00 0.00 4.52
344 345 3.096092 CCCCAAATAGCTAAAGTTGCCA 58.904 45.455 0.00 0.00 0.00 4.92
345 346 3.706086 CCCCAAATAGCTAAAGTTGCCAT 59.294 43.478 0.00 0.00 0.00 4.40
346 347 4.892934 CCCCAAATAGCTAAAGTTGCCATA 59.107 41.667 0.00 0.00 0.00 2.74
347 348 5.362430 CCCCAAATAGCTAAAGTTGCCATAA 59.638 40.000 0.00 0.00 0.00 1.90
348 349 6.127196 CCCCAAATAGCTAAAGTTGCCATAAA 60.127 38.462 0.00 0.00 0.00 1.40
349 350 7.327214 CCCAAATAGCTAAAGTTGCCATAAAA 58.673 34.615 0.00 0.00 0.00 1.52
350 351 7.821846 CCCAAATAGCTAAAGTTGCCATAAAAA 59.178 33.333 0.00 0.00 0.00 1.94
367 368 3.643159 AAAAAGTCAGGACGGAATTGC 57.357 42.857 0.00 0.00 36.20 3.56
368 369 2.568623 AAAGTCAGGACGGAATTGCT 57.431 45.000 0.00 0.00 36.20 3.91
369 370 2.568623 AAGTCAGGACGGAATTGCTT 57.431 45.000 0.00 0.00 36.20 3.91
370 371 2.100605 AGTCAGGACGGAATTGCTTC 57.899 50.000 0.00 0.00 36.20 3.86
371 372 0.721718 GTCAGGACGGAATTGCTTCG 59.278 55.000 0.00 0.00 31.75 3.79
372 373 0.320374 TCAGGACGGAATTGCTTCGT 59.680 50.000 0.00 0.00 31.75 3.85
373 374 0.443869 CAGGACGGAATTGCTTCGTG 59.556 55.000 10.78 10.78 31.75 4.35
374 375 1.134694 GGACGGAATTGCTTCGTGC 59.865 57.895 0.00 0.00 43.25 5.34
375 376 1.134694 GACGGAATTGCTTCGTGCC 59.865 57.895 0.00 0.00 42.00 5.01
376 377 1.573829 GACGGAATTGCTTCGTGCCA 61.574 55.000 0.00 0.00 42.00 4.92
377 378 1.154225 CGGAATTGCTTCGTGCCAC 60.154 57.895 0.00 0.00 42.00 5.01
378 379 1.851021 CGGAATTGCTTCGTGCCACA 61.851 55.000 0.00 0.00 42.00 4.17
379 380 0.387239 GGAATTGCTTCGTGCCACAC 60.387 55.000 0.00 0.00 42.00 3.82
380 381 0.310543 GAATTGCTTCGTGCCACACA 59.689 50.000 0.00 0.00 42.00 3.72
381 382 0.961019 AATTGCTTCGTGCCACACAT 59.039 45.000 0.00 0.00 42.00 3.21
382 383 0.241749 ATTGCTTCGTGCCACACATG 59.758 50.000 0.00 0.00 42.00 3.21
383 384 1.100463 TTGCTTCGTGCCACACATGT 61.100 50.000 0.00 0.00 42.00 3.21
384 385 1.081906 GCTTCGTGCCACACATGTG 60.082 57.895 24.25 24.25 45.23 3.21
395 396 3.476295 CACACATGTGGCACTTATCAC 57.524 47.619 28.64 0.00 42.10 3.06
396 397 2.076100 ACACATGTGGCACTTATCACG 58.924 47.619 28.64 2.85 36.74 4.35
397 398 1.398041 CACATGTGGCACTTATCACGG 59.602 52.381 18.51 2.13 36.74 4.94
398 399 1.277842 ACATGTGGCACTTATCACGGA 59.722 47.619 19.83 0.00 36.74 4.69
399 400 2.290008 ACATGTGGCACTTATCACGGAA 60.290 45.455 19.83 0.00 36.74 4.30
400 401 1.803334 TGTGGCACTTATCACGGAAC 58.197 50.000 19.83 0.00 36.74 3.62
401 402 1.070914 TGTGGCACTTATCACGGAACA 59.929 47.619 19.83 0.00 36.74 3.18
402 403 1.463444 GTGGCACTTATCACGGAACAC 59.537 52.381 11.13 0.00 0.00 3.32
427 428 5.582689 AATAAAGCAGACTAATGGCCAAC 57.417 39.130 10.96 0.00 0.00 3.77
438 439 7.502226 CAGACTAATGGCCAACCTAATCAAATA 59.498 37.037 10.96 0.00 36.63 1.40
529 530 3.005554 CGAACAGCTCAAATCATCACCT 58.994 45.455 0.00 0.00 0.00 4.00
689 693 1.968017 CACATGCAAGCGGACTGGT 60.968 57.895 0.00 0.00 0.00 4.00
782 786 4.074970 ACAAATGTCAGACCTGGCTAAAG 58.925 43.478 3.16 0.00 35.92 1.85
971 978 5.596361 ACACAATTGACAACCCATGAGTAAA 59.404 36.000 13.59 0.00 0.00 2.01
972 979 6.097554 ACACAATTGACAACCCATGAGTAAAA 59.902 34.615 13.59 0.00 0.00 1.52
1090 1098 1.065854 CGAACCTGGGCTCAGAAATCT 60.066 52.381 17.43 0.00 43.49 2.40
1095 1103 2.504996 CCTGGGCTCAGAAATCTTCTCT 59.495 50.000 17.43 0.00 43.49 3.10
1111 1121 1.815613 TCTCTAGCAGAGTCACACAGC 59.184 52.381 11.37 0.00 42.83 4.40
1116 1126 3.314331 AGAGTCACACAGCCCCCG 61.314 66.667 0.00 0.00 0.00 5.73
1213 1223 3.345737 CGAGGCGCTTGACTTCATA 57.654 52.632 7.64 0.00 0.00 2.15
1378 1388 2.478890 CGTCCCGCTCGTGACCTAT 61.479 63.158 0.00 0.00 0.00 2.57
1435 1445 2.105128 GACACCTCGCCGATCCTG 59.895 66.667 0.00 0.00 0.00 3.86
1478 1488 3.998913 TCCTCACAAGGTATGCATGAA 57.001 42.857 10.16 0.00 43.82 2.57
1479 1489 3.877559 TCCTCACAAGGTATGCATGAAG 58.122 45.455 10.16 0.00 43.82 3.02
1480 1490 3.264193 TCCTCACAAGGTATGCATGAAGT 59.736 43.478 10.16 0.00 43.82 3.01
1504 1518 2.809446 TGTACTCATGTGCATACTCGC 58.191 47.619 0.00 0.00 33.97 5.03
1519 1533 1.838568 CTCGCGGACATGCATGGATG 61.839 60.000 29.41 24.00 34.15 3.51
1557 1595 0.029567 TCGCGCAATGGTTCGTTTTT 59.970 45.000 8.75 0.00 0.00 1.94
1839 1877 2.340809 CGTACACGAGCCCCAACA 59.659 61.111 0.00 0.00 43.02 3.33
1949 1987 2.431260 GTGTTCGCGTCGGGCTTA 60.431 61.111 5.77 0.00 40.44 3.09
1952 1990 1.735559 GTTCGCGTCGGGCTTACTT 60.736 57.895 5.77 0.00 40.44 2.24
2206 2244 0.461870 GCCATGTCGCAGTACATCCA 60.462 55.000 0.00 0.00 38.01 3.41
2231 2269 3.818787 GAGTTCTACGGCGGCGGA 61.819 66.667 35.05 27.54 0.00 5.54
2270 2308 0.388134 TGTACGCTTCTTCGGAGTGC 60.388 55.000 0.00 0.00 0.00 4.40
2273 2311 0.818296 ACGCTTCTTCGGAGTGCTAT 59.182 50.000 9.13 0.00 0.00 2.97
2300 2338 0.850100 TGAACCTCAACCCCATGTGT 59.150 50.000 0.00 0.00 0.00 3.72
2312 2350 2.125269 ATGTGTAAGCCCGGCGAC 60.125 61.111 9.30 7.15 0.00 5.19
2476 2514 3.976339 CCTTCTCAGGTATGGCTCG 57.024 57.895 0.00 0.00 35.06 5.03
2483 2521 0.037882 CAGGTATGGCTCGATCGCAT 60.038 55.000 11.09 10.91 0.00 4.73
2491 2529 1.565305 GCTCGATCGCATCTTCAACT 58.435 50.000 11.09 0.00 0.00 3.16
2498 2536 4.317909 CGATCGCATCTTCAACTCATTCTG 60.318 45.833 0.26 0.00 0.00 3.02
2534 2572 2.289257 TGCCTCGATGATCTTATGCCTG 60.289 50.000 0.00 0.00 0.00 4.85
2535 2573 2.289320 GCCTCGATGATCTTATGCCTGT 60.289 50.000 0.00 0.00 0.00 4.00
2536 2574 3.324117 CCTCGATGATCTTATGCCTGTG 58.676 50.000 0.00 0.00 0.00 3.66
2537 2575 2.735663 CTCGATGATCTTATGCCTGTGC 59.264 50.000 0.00 0.00 38.26 4.57
2538 2576 2.366590 TCGATGATCTTATGCCTGTGCT 59.633 45.455 0.00 0.00 38.71 4.40
2539 2577 2.479275 CGATGATCTTATGCCTGTGCTG 59.521 50.000 0.00 0.00 38.71 4.41
2540 2578 2.336945 TGATCTTATGCCTGTGCTGG 57.663 50.000 0.00 0.00 38.71 4.85
2541 2579 1.839354 TGATCTTATGCCTGTGCTGGA 59.161 47.619 0.00 0.00 38.71 3.86
2542 2580 2.440627 TGATCTTATGCCTGTGCTGGAT 59.559 45.455 0.00 0.00 38.71 3.41
2543 2581 3.117776 TGATCTTATGCCTGTGCTGGATT 60.118 43.478 0.00 0.00 38.71 3.01
2544 2582 3.370840 TCTTATGCCTGTGCTGGATTT 57.629 42.857 0.00 0.00 38.71 2.17
2568 2606 5.856126 TTTAGCAAGACTAACATTGTCCG 57.144 39.130 0.00 0.00 40.63 4.79
2577 2615 3.682858 ACTAACATTGTCCGTGTGTATGC 59.317 43.478 0.00 0.00 0.00 3.14
2580 2618 1.933181 CATTGTCCGTGTGTATGCGAT 59.067 47.619 0.00 0.00 0.00 4.58
2581 2619 2.087501 TTGTCCGTGTGTATGCGATT 57.912 45.000 0.00 0.00 0.00 3.34
2982 3029 2.579787 GAGATCCGCGTGGTGTCG 60.580 66.667 16.01 0.00 36.30 4.35
3100 3147 2.676822 AGCTTCTGGACGCGAGGA 60.677 61.111 15.93 1.66 0.00 3.71
3147 3194 2.358619 CCAAAATGGAGCCCCGGA 59.641 61.111 0.73 0.00 40.96 5.14
3242 3304 1.264749 CGGGTTGGAGGAGGATGACA 61.265 60.000 0.00 0.00 0.00 3.58
3252 3314 2.240414 AGGAGGATGACAATGCATGACA 59.760 45.455 0.00 1.24 38.07 3.58
3459 3521 6.298361 ACTTTTATTAAACCACCACGTACCT 58.702 36.000 0.00 0.00 0.00 3.08
3539 3601 5.964477 TGGGAAAGGACTCAGTTATCTACAT 59.036 40.000 0.00 0.00 0.00 2.29
3799 3923 4.891992 ACAGGGTATAGCCACATACATC 57.108 45.455 22.59 0.00 39.65 3.06
3807 3931 1.160329 GCCACATACATCCGGAGCAC 61.160 60.000 11.34 0.00 0.00 4.40
3922 4537 1.469251 CCCCACCATGAACCCCTTT 59.531 57.895 0.00 0.00 0.00 3.11
3934 4549 5.333566 TGAACCCCTTTGAGAACCTTATT 57.666 39.130 0.00 0.00 0.00 1.40
3967 4582 5.499004 ACTCCACAAGCCTAATTAGAACA 57.501 39.130 14.28 0.00 0.00 3.18
3969 4584 5.013183 ACTCCACAAGCCTAATTAGAACACT 59.987 40.000 14.28 3.17 0.00 3.55
3970 4585 6.212791 ACTCCACAAGCCTAATTAGAACACTA 59.787 38.462 14.28 0.00 0.00 2.74
3972 4587 5.294552 CCACAAGCCTAATTAGAACACTAGC 59.705 44.000 14.28 6.77 0.00 3.42
3979 4594 0.970640 TTAGAACACTAGCGTGGGCA 59.029 50.000 0.00 0.00 45.50 5.36
3988 4603 3.880846 GCGTGGGCATGCTAGCAC 61.881 66.667 22.07 8.33 40.09 4.40
4008 4623 3.370978 CACGAGCGACAAAAGGAACATAT 59.629 43.478 0.00 0.00 0.00 1.78
4009 4624 3.617263 ACGAGCGACAAAAGGAACATATC 59.383 43.478 0.00 0.00 0.00 1.63
4028 4643 3.251016 TCCATCTACTCCCTCCATCTG 57.749 52.381 0.00 0.00 0.00 2.90
4053 4668 0.179108 GACTGCGCGATTAAGAGGGT 60.179 55.000 12.10 0.00 0.00 4.34
4056 4671 3.309675 CGCGATTAAGAGGGTGCG 58.690 61.111 0.00 0.00 39.57 5.34
4058 4673 1.082117 CGCGATTAAGAGGGTGCGTT 61.082 55.000 0.00 0.00 40.61 4.84
4060 4675 1.722011 CGATTAAGAGGGTGCGTTGT 58.278 50.000 0.00 0.00 0.00 3.32
4068 4683 1.166531 AGGGTGCGTTGTGAAGCTTC 61.167 55.000 19.89 19.89 0.00 3.86
4088 4703 1.393539 CGCTTTCTTACCGGTGTCATG 59.606 52.381 19.93 4.12 0.00 3.07
4111 4726 5.248248 TGGGACATGTCTAAGTCAAGATTCA 59.752 40.000 24.50 0.00 36.50 2.57
4137 4758 7.342799 ACAATGCATTGATAGGAAAGTTATGGT 59.657 33.333 38.99 12.95 40.14 3.55
4146 4767 1.130561 GAAAGTTATGGTGGCTGCGAC 59.869 52.381 6.21 6.21 0.00 5.19
4154 4775 2.031012 TGGCTGCGACTTGAGGTG 59.969 61.111 0.00 0.00 0.00 4.00
4166 4787 2.158957 ACTTGAGGTGTTGAAGCTTCGA 60.159 45.455 21.11 17.11 36.52 3.71
4169 4790 1.734465 GAGGTGTTGAAGCTTCGATGG 59.266 52.381 19.35 0.00 36.52 3.51
4198 4819 6.093219 GGCATATTAGATGCGATGAAGATTGT 59.907 38.462 5.72 0.00 45.41 2.71
4222 4843 2.814097 GCCAGGTGTATGGTGACTTGTT 60.814 50.000 0.00 0.00 42.75 2.83
4228 4849 3.815401 GTGTATGGTGACTTGTTTCAGCT 59.185 43.478 4.16 0.00 43.19 4.24
4266 4887 2.046507 CAGCACTGGAGGACTGCC 60.047 66.667 0.00 0.00 0.00 4.85
4281 4902 0.465287 CTGCCTTTTTGGTGGTGCTT 59.535 50.000 0.00 0.00 38.35 3.91
4287 4908 2.045561 TTTTGGTGGTGCTTCTCGAA 57.954 45.000 0.00 0.00 0.00 3.71
4291 4912 1.899814 TGGTGGTGCTTCTCGAATACT 59.100 47.619 0.00 0.00 0.00 2.12
4304 4925 5.116882 TCTCGAATACTGAGTCTCGATTCA 58.883 41.667 16.76 5.29 39.39 2.57
4310 4931 1.821753 CTGAGTCTCGATTCACAGGGT 59.178 52.381 0.00 0.00 0.00 4.34
4315 4936 5.221561 TGAGTCTCGATTCACAGGGTAAAAA 60.222 40.000 0.00 0.00 0.00 1.94
4406 5028 5.888982 TGGACTTTCTCTAGGTGAAAACT 57.111 39.130 11.14 2.84 33.70 2.66
4417 5039 7.233553 TCTCTAGGTGAAAACTCAAGATCTTCA 59.766 37.037 4.57 0.00 0.00 3.02
4424 5046 4.559862 AACTCAAGATCTTCAATCGGGT 57.440 40.909 4.57 0.00 0.00 5.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.304761 ACCCGCAACTCATCTTTCCTAA 59.695 45.455 0.00 0.00 0.00 2.69
1 2 1.906574 ACCCGCAACTCATCTTTCCTA 59.093 47.619 0.00 0.00 0.00 2.94
2 3 0.693049 ACCCGCAACTCATCTTTCCT 59.307 50.000 0.00 0.00 0.00 3.36
6 7 0.400213 TTGGACCCGCAACTCATCTT 59.600 50.000 0.00 0.00 0.00 2.40
7 8 0.400213 TTTGGACCCGCAACTCATCT 59.600 50.000 0.00 0.00 0.00 2.90
8 9 0.521735 GTTTGGACCCGCAACTCATC 59.478 55.000 0.00 0.00 0.00 2.92
9 10 1.234615 CGTTTGGACCCGCAACTCAT 61.235 55.000 0.00 0.00 0.00 2.90
10 11 1.890041 CGTTTGGACCCGCAACTCA 60.890 57.895 0.00 0.00 0.00 3.41
11 12 0.600782 TACGTTTGGACCCGCAACTC 60.601 55.000 0.00 0.00 0.00 3.01
12 13 0.601841 CTACGTTTGGACCCGCAACT 60.602 55.000 0.00 0.00 0.00 3.16
13 14 1.864176 CTACGTTTGGACCCGCAAC 59.136 57.895 0.00 0.00 0.00 4.17
14 15 1.962306 GCTACGTTTGGACCCGCAA 60.962 57.895 0.00 0.00 0.00 4.85
15 16 2.357760 GCTACGTTTGGACCCGCA 60.358 61.111 0.00 0.00 0.00 5.69
16 17 1.303091 AATGCTACGTTTGGACCCGC 61.303 55.000 0.00 0.00 0.00 6.13
17 18 1.135803 CAAATGCTACGTTTGGACCCG 60.136 52.381 0.00 0.00 33.91 5.28
18 19 2.156098 TCAAATGCTACGTTTGGACCC 58.844 47.619 11.27 0.00 37.22 4.46
19 20 3.071479 TCTCAAATGCTACGTTTGGACC 58.929 45.455 11.27 0.00 37.22 4.46
20 21 3.746492 ACTCTCAAATGCTACGTTTGGAC 59.254 43.478 11.27 0.00 37.22 4.02
21 22 4.002906 ACTCTCAAATGCTACGTTTGGA 57.997 40.909 11.27 7.49 37.22 3.53
22 23 4.213270 TGAACTCTCAAATGCTACGTTTGG 59.787 41.667 11.27 4.23 37.22 3.28
23 24 5.050091 ACTGAACTCTCAAATGCTACGTTTG 60.050 40.000 0.00 6.02 37.79 2.93
24 25 5.057149 ACTGAACTCTCAAATGCTACGTTT 58.943 37.500 0.00 0.00 0.00 3.60
25 26 4.632153 ACTGAACTCTCAAATGCTACGTT 58.368 39.130 0.00 0.00 0.00 3.99
26 27 4.258702 ACTGAACTCTCAAATGCTACGT 57.741 40.909 0.00 0.00 0.00 3.57
27 28 5.177511 TGAAACTGAACTCTCAAATGCTACG 59.822 40.000 0.00 0.00 0.00 3.51
28 29 6.017934 TGTGAAACTGAACTCTCAAATGCTAC 60.018 38.462 0.00 0.00 38.04 3.58
29 30 6.054941 TGTGAAACTGAACTCTCAAATGCTA 58.945 36.000 0.00 0.00 38.04 3.49
30 31 4.883585 TGTGAAACTGAACTCTCAAATGCT 59.116 37.500 0.00 0.00 38.04 3.79
31 32 5.173774 TGTGAAACTGAACTCTCAAATGC 57.826 39.130 0.00 0.00 38.04 3.56
32 33 6.854892 GTGATGTGAAACTGAACTCTCAAATG 59.145 38.462 0.00 0.00 38.04 2.32
33 34 6.543465 TGTGATGTGAAACTGAACTCTCAAAT 59.457 34.615 0.00 0.00 38.04 2.32
34 35 5.879777 TGTGATGTGAAACTGAACTCTCAAA 59.120 36.000 0.00 0.00 38.04 2.69
35 36 5.427378 TGTGATGTGAAACTGAACTCTCAA 58.573 37.500 0.00 0.00 38.04 3.02
36 37 5.022282 TGTGATGTGAAACTGAACTCTCA 57.978 39.130 0.00 0.00 38.04 3.27
37 38 5.616424 GCATGTGATGTGAAACTGAACTCTC 60.616 44.000 0.00 0.00 38.04 3.20
38 39 4.214971 GCATGTGATGTGAAACTGAACTCT 59.785 41.667 0.00 0.00 38.04 3.24
39 40 4.470462 GCATGTGATGTGAAACTGAACTC 58.530 43.478 0.00 0.00 38.04 3.01
40 41 3.254166 GGCATGTGATGTGAAACTGAACT 59.746 43.478 0.00 0.00 38.04 3.01
41 42 3.004629 TGGCATGTGATGTGAAACTGAAC 59.995 43.478 0.00 0.00 38.04 3.18
42 43 3.004629 GTGGCATGTGATGTGAAACTGAA 59.995 43.478 0.00 0.00 38.04 3.02
43 44 2.553602 GTGGCATGTGATGTGAAACTGA 59.446 45.455 0.00 0.00 38.04 3.41
44 45 2.293955 TGTGGCATGTGATGTGAAACTG 59.706 45.455 0.00 0.00 38.04 3.16
45 46 2.585330 TGTGGCATGTGATGTGAAACT 58.415 42.857 0.00 0.00 38.04 2.66
46 47 3.581024 ATGTGGCATGTGATGTGAAAC 57.419 42.857 0.00 0.00 37.35 2.78
47 48 3.366171 CGAATGTGGCATGTGATGTGAAA 60.366 43.478 0.00 0.00 0.00 2.69
48 49 2.162008 CGAATGTGGCATGTGATGTGAA 59.838 45.455 0.00 0.00 0.00 3.18
49 50 1.738908 CGAATGTGGCATGTGATGTGA 59.261 47.619 0.00 0.00 0.00 3.58
50 51 1.469703 ACGAATGTGGCATGTGATGTG 59.530 47.619 0.00 0.00 0.00 3.21
51 52 1.825090 ACGAATGTGGCATGTGATGT 58.175 45.000 0.00 0.00 0.00 3.06
52 53 2.925578 AACGAATGTGGCATGTGATG 57.074 45.000 0.00 0.00 0.00 3.07
53 54 3.670359 CGAAAACGAATGTGGCATGTGAT 60.670 43.478 0.00 0.00 0.00 3.06
54 55 2.350293 CGAAAACGAATGTGGCATGTGA 60.350 45.455 0.00 0.00 0.00 3.58
55 56 1.978097 CGAAAACGAATGTGGCATGTG 59.022 47.619 0.00 0.00 0.00 3.21
56 57 1.068610 CCGAAAACGAATGTGGCATGT 60.069 47.619 0.00 0.00 0.00 3.21
57 58 1.616620 CCGAAAACGAATGTGGCATG 58.383 50.000 0.00 0.00 0.00 4.06
58 59 0.525761 CCCGAAAACGAATGTGGCAT 59.474 50.000 0.00 0.00 0.00 4.40
59 60 1.953017 CCCGAAAACGAATGTGGCA 59.047 52.632 0.00 0.00 0.00 4.92
60 61 1.443702 GCCCGAAAACGAATGTGGC 60.444 57.895 0.00 0.00 0.00 5.01
61 62 0.525761 ATGCCCGAAAACGAATGTGG 59.474 50.000 0.00 0.00 0.00 4.17
62 63 3.119990 ACTTATGCCCGAAAACGAATGTG 60.120 43.478 0.00 0.00 0.00 3.21
63 64 3.078837 ACTTATGCCCGAAAACGAATGT 58.921 40.909 0.00 0.00 0.00 2.71
64 65 3.757745 ACTTATGCCCGAAAACGAATG 57.242 42.857 0.00 0.00 0.00 2.67
65 66 4.510571 ACTACTTATGCCCGAAAACGAAT 58.489 39.130 0.00 0.00 0.00 3.34
66 67 3.929094 ACTACTTATGCCCGAAAACGAA 58.071 40.909 0.00 0.00 0.00 3.85
67 68 3.598019 ACTACTTATGCCCGAAAACGA 57.402 42.857 0.00 0.00 0.00 3.85
68 69 5.446340 GGTTAACTACTTATGCCCGAAAACG 60.446 44.000 5.42 0.00 0.00 3.60
69 70 5.163723 GGGTTAACTACTTATGCCCGAAAAC 60.164 44.000 5.42 0.00 0.00 2.43
70 71 4.943093 GGGTTAACTACTTATGCCCGAAAA 59.057 41.667 5.42 0.00 0.00 2.29
71 72 4.019501 TGGGTTAACTACTTATGCCCGAAA 60.020 41.667 5.42 0.00 33.32 3.46
72 73 3.518705 TGGGTTAACTACTTATGCCCGAA 59.481 43.478 5.42 0.00 33.32 4.30
73 74 3.106054 TGGGTTAACTACTTATGCCCGA 58.894 45.455 5.42 0.00 33.32 5.14
74 75 3.547054 TGGGTTAACTACTTATGCCCG 57.453 47.619 5.42 0.00 33.32 6.13
75 76 5.068591 CCAAATGGGTTAACTACTTATGCCC 59.931 44.000 5.42 0.00 32.17 5.36
76 77 6.144078 CCAAATGGGTTAACTACTTATGCC 57.856 41.667 5.42 0.00 0.00 4.40
92 93 7.255730 GGATGATCATTCTTCTTACCCAAATGG 60.256 40.741 10.14 0.00 41.37 3.16
93 94 7.504911 AGGATGATCATTCTTCTTACCCAAATG 59.495 37.037 11.01 0.00 0.00 2.32
94 95 7.504911 CAGGATGATCATTCTTCTTACCCAAAT 59.495 37.037 14.27 0.00 39.69 2.32
95 96 6.830324 CAGGATGATCATTCTTCTTACCCAAA 59.170 38.462 14.27 0.00 39.69 3.28
96 97 6.359804 CAGGATGATCATTCTTCTTACCCAA 58.640 40.000 14.27 0.00 39.69 4.12
97 98 5.688500 GCAGGATGATCATTCTTCTTACCCA 60.689 44.000 14.27 0.00 39.69 4.51
98 99 4.759183 GCAGGATGATCATTCTTCTTACCC 59.241 45.833 14.27 5.04 39.69 3.69
99 100 4.450419 CGCAGGATGATCATTCTTCTTACC 59.550 45.833 14.27 5.76 39.69 2.85
100 101 5.053145 ACGCAGGATGATCATTCTTCTTAC 58.947 41.667 14.27 1.36 39.69 2.34
101 102 5.282055 ACGCAGGATGATCATTCTTCTTA 57.718 39.130 14.27 0.00 39.69 2.10
102 103 4.148128 ACGCAGGATGATCATTCTTCTT 57.852 40.909 14.27 0.00 39.69 2.52
103 104 3.834489 ACGCAGGATGATCATTCTTCT 57.166 42.857 14.27 5.07 39.69 2.85
104 105 5.991328 TTAACGCAGGATGATCATTCTTC 57.009 39.130 14.27 8.70 39.69 2.87
105 106 5.066505 GGTTTAACGCAGGATGATCATTCTT 59.933 40.000 14.27 2.47 39.69 2.52
106 107 4.576463 GGTTTAACGCAGGATGATCATTCT 59.424 41.667 11.01 11.01 39.69 2.40
107 108 4.576463 AGGTTTAACGCAGGATGATCATTC 59.424 41.667 10.14 7.94 39.69 2.67
108 109 4.336433 CAGGTTTAACGCAGGATGATCATT 59.664 41.667 10.14 0.00 39.69 2.57
109 110 3.879295 CAGGTTTAACGCAGGATGATCAT 59.121 43.478 8.25 8.25 39.69 2.45
110 111 3.270027 CAGGTTTAACGCAGGATGATCA 58.730 45.455 0.00 0.00 39.69 2.92
111 112 3.270877 ACAGGTTTAACGCAGGATGATC 58.729 45.455 0.00 0.00 39.69 2.92
112 113 3.350219 ACAGGTTTAACGCAGGATGAT 57.650 42.857 0.00 0.00 39.69 2.45
113 114 2.851263 ACAGGTTTAACGCAGGATGA 57.149 45.000 0.00 0.00 39.69 2.92
114 115 3.915437 AAACAGGTTTAACGCAGGATG 57.085 42.857 0.00 0.00 40.87 3.51
115 116 3.058501 CGAAAACAGGTTTAACGCAGGAT 60.059 43.478 0.00 0.00 31.63 3.24
116 117 2.288458 CGAAAACAGGTTTAACGCAGGA 59.712 45.455 0.00 0.00 31.63 3.86
117 118 2.603652 CCGAAAACAGGTTTAACGCAGG 60.604 50.000 14.37 3.78 34.10 4.85
118 119 2.603652 CCCGAAAACAGGTTTAACGCAG 60.604 50.000 14.37 7.81 34.10 5.18
119 120 1.334243 CCCGAAAACAGGTTTAACGCA 59.666 47.619 14.37 0.00 34.10 5.24
120 121 1.927268 GCCCGAAAACAGGTTTAACGC 60.927 52.381 14.37 5.27 34.10 4.84
121 122 1.334243 TGCCCGAAAACAGGTTTAACG 59.666 47.619 13.45 13.45 34.68 3.18
122 123 3.653539 ATGCCCGAAAACAGGTTTAAC 57.346 42.857 0.00 0.00 31.63 2.01
123 124 4.381079 GCATATGCCCGAAAACAGGTTTAA 60.381 41.667 17.26 0.00 34.31 1.52
124 125 3.129638 GCATATGCCCGAAAACAGGTTTA 59.870 43.478 17.26 0.00 34.31 2.01
125 126 2.094234 GCATATGCCCGAAAACAGGTTT 60.094 45.455 17.26 0.00 34.31 3.27
126 127 1.476488 GCATATGCCCGAAAACAGGTT 59.524 47.619 17.26 0.00 34.31 3.50
127 128 1.102978 GCATATGCCCGAAAACAGGT 58.897 50.000 17.26 0.00 34.31 4.00
128 129 1.334869 GAGCATATGCCCGAAAACAGG 59.665 52.381 23.96 0.00 43.38 4.00
129 130 1.334869 GGAGCATATGCCCGAAAACAG 59.665 52.381 23.96 0.00 43.38 3.16
130 131 1.388547 GGAGCATATGCCCGAAAACA 58.611 50.000 23.96 0.00 43.38 2.83
137 138 0.106708 TTGTCTCGGAGCATATGCCC 59.893 55.000 23.96 21.46 43.38 5.36
138 139 2.175878 ATTGTCTCGGAGCATATGCC 57.824 50.000 23.96 14.86 43.38 4.40
139 140 2.874701 ACAATTGTCTCGGAGCATATGC 59.125 45.455 20.36 20.36 42.49 3.14
140 141 5.532557 TCTACAATTGTCTCGGAGCATATG 58.467 41.667 15.85 0.00 0.00 1.78
141 142 5.791336 TCTACAATTGTCTCGGAGCATAT 57.209 39.130 15.85 0.00 0.00 1.78
142 143 5.592104 TTCTACAATTGTCTCGGAGCATA 57.408 39.130 15.85 0.00 0.00 3.14
143 144 4.471904 TTCTACAATTGTCTCGGAGCAT 57.528 40.909 15.85 0.00 0.00 3.79
144 145 3.953712 TTCTACAATTGTCTCGGAGCA 57.046 42.857 15.85 0.00 0.00 4.26
145 146 3.557595 CCATTCTACAATTGTCTCGGAGC 59.442 47.826 15.85 0.00 0.00 4.70
146 147 4.759782 ACCATTCTACAATTGTCTCGGAG 58.240 43.478 15.85 6.67 0.00 4.63
147 148 4.819105 ACCATTCTACAATTGTCTCGGA 57.181 40.909 15.85 6.85 0.00 4.55
148 149 4.809426 GGTACCATTCTACAATTGTCTCGG 59.191 45.833 15.85 11.92 0.00 4.63
149 150 5.291128 GTGGTACCATTCTACAATTGTCTCG 59.709 44.000 19.72 5.27 0.00 4.04
150 151 6.407202 AGTGGTACCATTCTACAATTGTCTC 58.593 40.000 19.72 0.00 0.00 3.36
151 152 6.013725 TGAGTGGTACCATTCTACAATTGTCT 60.014 38.462 30.68 14.25 34.39 3.41
152 153 6.170506 TGAGTGGTACCATTCTACAATTGTC 58.829 40.000 30.68 10.01 34.39 3.18
153 154 6.013725 TCTGAGTGGTACCATTCTACAATTGT 60.014 38.462 30.68 16.68 34.39 2.71
154 155 6.406370 TCTGAGTGGTACCATTCTACAATTG 58.594 40.000 30.68 15.48 34.39 2.32
155 156 6.620877 TCTGAGTGGTACCATTCTACAATT 57.379 37.500 30.68 5.92 34.39 2.32
156 157 6.461648 CGATCTGAGTGGTACCATTCTACAAT 60.462 42.308 30.68 20.24 34.39 2.71
157 158 5.163550 CGATCTGAGTGGTACCATTCTACAA 60.164 44.000 30.68 17.27 34.39 2.41
158 159 4.338400 CGATCTGAGTGGTACCATTCTACA 59.662 45.833 30.68 18.24 34.39 2.74
159 160 4.261656 CCGATCTGAGTGGTACCATTCTAC 60.262 50.000 30.68 19.64 34.39 2.59
160 161 3.889538 CCGATCTGAGTGGTACCATTCTA 59.110 47.826 30.68 21.61 34.39 2.10
161 162 2.695666 CCGATCTGAGTGGTACCATTCT 59.304 50.000 30.68 19.59 34.39 2.40
162 163 2.224066 CCCGATCTGAGTGGTACCATTC 60.224 54.545 26.20 26.20 33.96 2.67
163 164 1.762957 CCCGATCTGAGTGGTACCATT 59.237 52.381 19.72 14.90 0.00 3.16
164 165 1.414158 CCCGATCTGAGTGGTACCAT 58.586 55.000 19.72 7.23 0.00 3.55
165 166 0.686441 CCCCGATCTGAGTGGTACCA 60.686 60.000 11.60 11.60 0.00 3.25
166 167 1.400530 CCCCCGATCTGAGTGGTACC 61.401 65.000 4.43 4.43 0.00 3.34
167 168 0.396695 TCCCCCGATCTGAGTGGTAC 60.397 60.000 0.00 0.00 0.00 3.34
168 169 0.337082 TTCCCCCGATCTGAGTGGTA 59.663 55.000 0.00 0.00 0.00 3.25
169 170 0.978146 CTTCCCCCGATCTGAGTGGT 60.978 60.000 0.00 0.00 0.00 4.16
170 171 0.978146 ACTTCCCCCGATCTGAGTGG 60.978 60.000 0.00 0.00 0.00 4.00
171 172 1.776662 TACTTCCCCCGATCTGAGTG 58.223 55.000 0.00 0.00 0.00 3.51
172 173 2.777459 ATACTTCCCCCGATCTGAGT 57.223 50.000 0.00 0.00 0.00 3.41
173 174 5.952947 AGTATAATACTTCCCCCGATCTGAG 59.047 44.000 0.00 0.00 34.86 3.35
174 175 5.900437 AGTATAATACTTCCCCCGATCTGA 58.100 41.667 0.00 0.00 34.86 3.27
175 176 6.607004 AAGTATAATACTTCCCCCGATCTG 57.393 41.667 0.00 0.00 45.38 2.90
190 191 9.588096 GGGAACTTATCATTTGGGAAGTATAAT 57.412 33.333 0.00 0.00 31.96 1.28
191 192 8.002459 GGGGAACTTATCATTTGGGAAGTATAA 58.998 37.037 0.00 0.00 31.96 0.98
192 193 7.129660 TGGGGAACTTATCATTTGGGAAGTATA 59.870 37.037 0.00 0.00 31.96 1.47
193 194 6.068498 TGGGGAACTTATCATTTGGGAAGTAT 60.068 38.462 0.00 0.00 31.96 2.12
194 195 5.254267 TGGGGAACTTATCATTTGGGAAGTA 59.746 40.000 0.00 0.00 31.96 2.24
195 196 4.045334 TGGGGAACTTATCATTTGGGAAGT 59.955 41.667 0.00 0.00 33.60 3.01
196 197 4.609301 TGGGGAACTTATCATTTGGGAAG 58.391 43.478 0.00 0.00 0.00 3.46
197 198 4.683766 TGGGGAACTTATCATTTGGGAA 57.316 40.909 0.00 0.00 0.00 3.97
198 199 4.016666 ACATGGGGAACTTATCATTTGGGA 60.017 41.667 0.00 0.00 0.00 4.37
199 200 4.289245 ACATGGGGAACTTATCATTTGGG 58.711 43.478 0.00 0.00 0.00 4.12
200 201 5.937975 AACATGGGGAACTTATCATTTGG 57.062 39.130 0.00 0.00 0.00 3.28
201 202 7.835822 TGTAAACATGGGGAACTTATCATTTG 58.164 34.615 0.00 0.00 0.00 2.32
202 203 8.429237 TTGTAAACATGGGGAACTTATCATTT 57.571 30.769 0.00 0.00 0.00 2.32
221 222 9.823647 TTTTCAGATGGCAATTTTAGTTGTAAA 57.176 25.926 0.00 0.00 0.00 2.01
222 223 9.823647 TTTTTCAGATGGCAATTTTAGTTGTAA 57.176 25.926 0.00 0.00 0.00 2.41
248 249 9.776158 GTTTCAATATTTTTGGGTTTCGTTTTT 57.224 25.926 0.00 0.00 0.00 1.94
249 250 9.168451 AGTTTCAATATTTTTGGGTTTCGTTTT 57.832 25.926 0.00 0.00 0.00 2.43
250 251 8.725405 AGTTTCAATATTTTTGGGTTTCGTTT 57.275 26.923 0.00 0.00 0.00 3.60
251 252 8.608317 CAAGTTTCAATATTTTTGGGTTTCGTT 58.392 29.630 0.00 0.00 0.00 3.85
252 253 7.766738 ACAAGTTTCAATATTTTTGGGTTTCGT 59.233 29.630 0.00 0.00 0.00 3.85
253 254 8.137210 ACAAGTTTCAATATTTTTGGGTTTCG 57.863 30.769 0.00 0.00 0.00 3.46
254 255 8.556194 GGACAAGTTTCAATATTTTTGGGTTTC 58.444 33.333 0.00 0.00 0.00 2.78
255 256 7.500892 GGGACAAGTTTCAATATTTTTGGGTTT 59.499 33.333 0.00 0.00 0.00 3.27
256 257 6.995686 GGGACAAGTTTCAATATTTTTGGGTT 59.004 34.615 0.00 0.00 0.00 4.11
257 258 6.465178 GGGGACAAGTTTCAATATTTTTGGGT 60.465 38.462 0.00 0.00 0.00 4.51
258 259 5.937540 GGGGACAAGTTTCAATATTTTTGGG 59.062 40.000 0.00 0.00 0.00 4.12
259 260 5.937540 GGGGGACAAGTTTCAATATTTTTGG 59.062 40.000 0.00 0.00 0.00 3.28
260 261 6.529220 TGGGGGACAAGTTTCAATATTTTTG 58.471 36.000 0.00 0.00 0.00 2.44
261 262 6.755542 TGGGGGACAAGTTTCAATATTTTT 57.244 33.333 0.00 0.00 0.00 1.94
262 263 6.755542 TTGGGGGACAAGTTTCAATATTTT 57.244 33.333 0.00 0.00 33.18 1.82
263 264 6.100424 TGTTTGGGGGACAAGTTTCAATATTT 59.900 34.615 0.00 0.00 40.82 1.40
264 265 5.604650 TGTTTGGGGGACAAGTTTCAATATT 59.395 36.000 0.00 0.00 40.82 1.28
265 266 5.151454 TGTTTGGGGGACAAGTTTCAATAT 58.849 37.500 0.00 0.00 40.82 1.28
266 267 4.547671 TGTTTGGGGGACAAGTTTCAATA 58.452 39.130 0.00 0.00 40.82 1.90
267 268 3.379452 TGTTTGGGGGACAAGTTTCAAT 58.621 40.909 0.00 0.00 40.82 2.57
268 269 2.821437 TGTTTGGGGGACAAGTTTCAA 58.179 42.857 0.00 0.00 40.82 2.69
269 270 2.534042 TGTTTGGGGGACAAGTTTCA 57.466 45.000 0.00 0.00 40.82 2.69
270 271 3.897141 TTTGTTTGGGGGACAAGTTTC 57.103 42.857 0.00 0.00 40.82 2.78
271 272 4.042311 ACTTTTTGTTTGGGGGACAAGTTT 59.958 37.500 0.00 0.00 40.82 2.66
272 273 3.585289 ACTTTTTGTTTGGGGGACAAGTT 59.415 39.130 0.00 0.00 40.82 2.66
273 274 3.178046 ACTTTTTGTTTGGGGGACAAGT 58.822 40.909 0.00 0.00 40.82 3.16
274 275 3.904800 ACTTTTTGTTTGGGGGACAAG 57.095 42.857 0.00 0.00 40.82 3.16
275 276 3.870299 GCAACTTTTTGTTTGGGGGACAA 60.870 43.478 0.00 0.00 36.63 3.18
276 277 2.355209 GCAACTTTTTGTTTGGGGGACA 60.355 45.455 0.00 0.00 36.63 4.02
277 278 2.285083 GCAACTTTTTGTTTGGGGGAC 58.715 47.619 0.00 0.00 36.63 4.46
278 279 1.210722 GGCAACTTTTTGTTTGGGGGA 59.789 47.619 0.00 0.00 36.63 4.81
279 280 1.674359 GGCAACTTTTTGTTTGGGGG 58.326 50.000 0.00 0.00 36.63 5.40
280 281 1.294857 CGGCAACTTTTTGTTTGGGG 58.705 50.000 0.00 0.00 36.63 4.96
281 282 1.663135 CACGGCAACTTTTTGTTTGGG 59.337 47.619 0.00 0.00 36.63 4.12
282 283 1.061857 GCACGGCAACTTTTTGTTTGG 59.938 47.619 0.00 0.00 36.63 3.28
283 284 1.999024 AGCACGGCAACTTTTTGTTTG 59.001 42.857 0.00 0.00 36.63 2.93
284 285 2.378445 AGCACGGCAACTTTTTGTTT 57.622 40.000 0.00 0.00 36.63 2.83
285 286 2.267426 GAAGCACGGCAACTTTTTGTT 58.733 42.857 0.00 0.00 39.92 2.83
286 287 1.203523 TGAAGCACGGCAACTTTTTGT 59.796 42.857 0.00 0.00 34.90 2.83
287 288 1.587946 GTGAAGCACGGCAACTTTTTG 59.412 47.619 0.00 0.00 35.62 2.44
288 289 1.203523 TGTGAAGCACGGCAACTTTTT 59.796 42.857 0.00 0.00 37.14 1.94
289 290 0.814457 TGTGAAGCACGGCAACTTTT 59.186 45.000 0.00 0.00 37.14 2.27
290 291 0.814457 TTGTGAAGCACGGCAACTTT 59.186 45.000 0.00 0.00 37.14 2.66
291 292 0.100503 GTTGTGAAGCACGGCAACTT 59.899 50.000 0.00 0.00 38.41 2.66
292 293 0.748005 AGTTGTGAAGCACGGCAACT 60.748 50.000 9.78 9.78 44.36 3.16
293 294 0.941542 TAGTTGTGAAGCACGGCAAC 59.058 50.000 0.00 0.00 40.83 4.17
294 295 1.669604 TTAGTTGTGAAGCACGGCAA 58.330 45.000 0.00 0.00 37.14 4.52
295 296 1.601903 CTTTAGTTGTGAAGCACGGCA 59.398 47.619 0.00 0.00 37.14 5.69
296 297 1.602377 ACTTTAGTTGTGAAGCACGGC 59.398 47.619 0.00 0.00 37.14 5.68
297 298 3.963383 AACTTTAGTTGTGAAGCACGG 57.037 42.857 0.00 0.00 37.14 4.94
308 309 6.152831 GCTATTTGGGGATGACAACTTTAGTT 59.847 38.462 0.00 0.00 39.12 2.24
309 310 5.652452 GCTATTTGGGGATGACAACTTTAGT 59.348 40.000 0.00 0.00 0.00 2.24
310 311 5.888161 AGCTATTTGGGGATGACAACTTTAG 59.112 40.000 0.00 0.00 0.00 1.85
311 312 5.826643 AGCTATTTGGGGATGACAACTTTA 58.173 37.500 0.00 0.00 0.00 1.85
312 313 4.677182 AGCTATTTGGGGATGACAACTTT 58.323 39.130 0.00 0.00 0.00 2.66
313 314 4.322057 AGCTATTTGGGGATGACAACTT 57.678 40.909 0.00 0.00 0.00 2.66
314 315 5.450818 TTAGCTATTTGGGGATGACAACT 57.549 39.130 0.00 0.00 0.00 3.16
315 316 5.652452 ACTTTAGCTATTTGGGGATGACAAC 59.348 40.000 0.00 0.00 0.00 3.32
316 317 5.826643 ACTTTAGCTATTTGGGGATGACAA 58.173 37.500 0.00 0.00 0.00 3.18
317 318 5.450818 ACTTTAGCTATTTGGGGATGACA 57.549 39.130 0.00 0.00 0.00 3.58
318 319 5.450550 GCAACTTTAGCTATTTGGGGATGAC 60.451 44.000 0.00 0.00 0.00 3.06
319 320 4.644685 GCAACTTTAGCTATTTGGGGATGA 59.355 41.667 0.00 0.00 0.00 2.92
320 321 4.202151 GGCAACTTTAGCTATTTGGGGATG 60.202 45.833 0.00 0.00 0.00 3.51
321 322 3.960755 GGCAACTTTAGCTATTTGGGGAT 59.039 43.478 0.00 0.00 0.00 3.85
322 323 3.245443 TGGCAACTTTAGCTATTTGGGGA 60.245 43.478 0.00 0.00 37.61 4.81
323 324 3.096092 TGGCAACTTTAGCTATTTGGGG 58.904 45.455 0.00 0.00 37.61 4.96
324 325 6.463995 TTATGGCAACTTTAGCTATTTGGG 57.536 37.500 0.00 0.00 34.83 4.12
325 326 8.770438 TTTTTATGGCAACTTTAGCTATTTGG 57.230 30.769 0.00 0.00 34.83 3.28
347 348 3.222603 AGCAATTCCGTCCTGACTTTTT 58.777 40.909 0.00 0.00 0.00 1.94
348 349 2.863809 AGCAATTCCGTCCTGACTTTT 58.136 42.857 0.00 0.00 0.00 2.27
349 350 2.568623 AGCAATTCCGTCCTGACTTT 57.431 45.000 0.00 0.00 0.00 2.66
350 351 2.427506 GAAGCAATTCCGTCCTGACTT 58.572 47.619 0.00 0.00 0.00 3.01
351 352 1.673033 CGAAGCAATTCCGTCCTGACT 60.673 52.381 0.00 0.00 0.00 3.41
352 353 0.721718 CGAAGCAATTCCGTCCTGAC 59.278 55.000 0.00 0.00 0.00 3.51
353 354 0.320374 ACGAAGCAATTCCGTCCTGA 59.680 50.000 0.00 0.00 29.82 3.86
354 355 0.443869 CACGAAGCAATTCCGTCCTG 59.556 55.000 0.00 0.00 33.96 3.86
355 356 1.298859 GCACGAAGCAATTCCGTCCT 61.299 55.000 0.00 0.00 44.79 3.85
356 357 1.134694 GCACGAAGCAATTCCGTCC 59.865 57.895 0.00 0.00 44.79 4.79
357 358 4.745549 GCACGAAGCAATTCCGTC 57.254 55.556 0.00 0.00 44.79 4.79
366 367 1.081906 CACATGTGTGGCACGAAGC 60.082 57.895 18.03 3.88 42.10 3.86
375 376 2.159667 CGTGATAAGTGCCACATGTGTG 60.160 50.000 23.79 15.96 45.23 3.82
376 377 2.076100 CGTGATAAGTGCCACATGTGT 58.924 47.619 23.79 8.06 33.13 3.72
377 378 1.398041 CCGTGATAAGTGCCACATGTG 59.602 52.381 19.31 19.31 33.13 3.21
378 379 1.277842 TCCGTGATAAGTGCCACATGT 59.722 47.619 0.00 0.00 33.13 3.21
379 380 2.022764 TCCGTGATAAGTGCCACATG 57.977 50.000 0.00 0.00 33.13 3.21
380 381 2.290008 TGTTCCGTGATAAGTGCCACAT 60.290 45.455 0.00 0.00 33.13 3.21
381 382 1.070914 TGTTCCGTGATAAGTGCCACA 59.929 47.619 0.00 0.00 33.13 4.17
382 383 1.463444 GTGTTCCGTGATAAGTGCCAC 59.537 52.381 0.00 0.00 0.00 5.01
383 384 1.803334 GTGTTCCGTGATAAGTGCCA 58.197 50.000 0.00 0.00 0.00 4.92
384 385 0.719465 CGTGTTCCGTGATAAGTGCC 59.281 55.000 0.00 0.00 0.00 5.01
385 386 1.705256 TCGTGTTCCGTGATAAGTGC 58.295 50.000 0.00 0.00 37.94 4.40
386 387 4.921470 ATTTCGTGTTCCGTGATAAGTG 57.079 40.909 0.00 0.00 37.94 3.16
387 388 6.401796 GCTTTATTTCGTGTTCCGTGATAAGT 60.402 38.462 0.00 0.00 37.94 2.24
388 389 5.957796 GCTTTATTTCGTGTTCCGTGATAAG 59.042 40.000 0.00 0.00 37.94 1.73
389 390 5.408909 TGCTTTATTTCGTGTTCCGTGATAA 59.591 36.000 0.00 0.00 37.94 1.75
390 391 4.930405 TGCTTTATTTCGTGTTCCGTGATA 59.070 37.500 0.00 0.00 37.94 2.15
391 392 3.749088 TGCTTTATTTCGTGTTCCGTGAT 59.251 39.130 0.00 0.00 37.94 3.06
392 393 3.132160 TGCTTTATTTCGTGTTCCGTGA 58.868 40.909 0.00 0.00 37.94 4.35
393 394 3.185594 TCTGCTTTATTTCGTGTTCCGTG 59.814 43.478 0.00 0.00 37.94 4.94
394 395 3.185797 GTCTGCTTTATTTCGTGTTCCGT 59.814 43.478 0.00 0.00 37.94 4.69
395 396 3.432252 AGTCTGCTTTATTTCGTGTTCCG 59.568 43.478 0.00 0.00 38.13 4.30
396 397 6.476243 TTAGTCTGCTTTATTTCGTGTTCC 57.524 37.500 0.00 0.00 0.00 3.62
397 398 6.961554 CCATTAGTCTGCTTTATTTCGTGTTC 59.038 38.462 0.00 0.00 0.00 3.18
398 399 6.622896 GCCATTAGTCTGCTTTATTTCGTGTT 60.623 38.462 0.00 0.00 0.00 3.32
399 400 5.163754 GCCATTAGTCTGCTTTATTTCGTGT 60.164 40.000 0.00 0.00 0.00 4.49
400 401 5.266242 GCCATTAGTCTGCTTTATTTCGTG 58.734 41.667 0.00 0.00 0.00 4.35
401 402 4.335594 GGCCATTAGTCTGCTTTATTTCGT 59.664 41.667 0.00 0.00 0.00 3.85
402 403 4.335315 TGGCCATTAGTCTGCTTTATTTCG 59.665 41.667 0.00 0.00 0.00 3.46
403 404 5.835113 TGGCCATTAGTCTGCTTTATTTC 57.165 39.130 0.00 0.00 0.00 2.17
404 405 5.105351 GGTTGGCCATTAGTCTGCTTTATTT 60.105 40.000 6.09 0.00 34.09 1.40
438 439 5.235401 GTGCACGTTTCCACCATTTTTATTT 59.765 36.000 0.00 0.00 0.00 1.40
522 523 8.806429 TGTATAAAATGGCCATATAGGTGATG 57.194 34.615 21.15 0.00 40.61 3.07
529 530 8.864087 TGTGCAAATGTATAAAATGGCCATATA 58.136 29.630 21.15 15.79 0.00 0.86
689 693 4.513406 AGCTGGACCCGGAAAATAAATA 57.487 40.909 0.73 0.00 0.00 1.40
903 910 4.406649 TGGGCCTACTACTAACATTACACC 59.593 45.833 4.53 0.00 0.00 4.16
971 978 0.702316 GGGTGGTAATGGGGAGTGTT 59.298 55.000 0.00 0.00 0.00 3.32
972 979 0.476808 TGGGTGGTAATGGGGAGTGT 60.477 55.000 0.00 0.00 0.00 3.55
1090 1098 2.230025 GCTGTGTGACTCTGCTAGAGAA 59.770 50.000 16.81 5.23 45.07 2.87
1095 1103 1.544825 GGGGCTGTGTGACTCTGCTA 61.545 60.000 14.43 0.00 0.00 3.49
1116 1126 2.260869 ATGGCACCGCACTGTGAAC 61.261 57.895 12.86 0.00 38.55 3.18
1204 1214 2.414161 CGTGACGTGCTCTATGAAGTCA 60.414 50.000 0.00 0.00 36.43 3.41
1213 1223 3.973516 TTCGCCGTGACGTGCTCT 61.974 61.111 14.48 0.00 0.00 4.09
1316 1326 4.792804 GAGGGGGCTGCTGCTGAC 62.793 72.222 15.64 7.33 39.59 3.51
1378 1388 1.610673 GTCAGGCTGGAGGTCCTCA 60.611 63.158 20.72 6.09 36.82 3.86
1421 1431 3.148279 GGACAGGATCGGCGAGGT 61.148 66.667 17.22 10.82 0.00 3.85
1435 1445 2.514824 GAGATGGGCTTGCCGGAC 60.515 66.667 5.05 0.00 0.00 4.79
1519 1533 1.861575 GAGGCAAGTTAGCGCATAGAC 59.138 52.381 11.47 1.88 34.64 2.59
1557 1595 2.345991 GCCCGAGCTGGTACACAA 59.654 61.111 0.00 0.00 35.15 3.33
1592 1630 1.091771 CGATGGTCGGCATGAGCTTT 61.092 55.000 0.00 0.00 45.46 3.51
1839 1877 1.973281 CCACGCACAGAATGGCCTT 60.973 57.895 3.32 0.00 43.62 4.35
2206 2244 1.031029 GCCGTAGAACTCGAGGGTCT 61.031 60.000 18.41 19.73 45.19 3.85
2270 2308 2.678336 GTTGAGGTTCAGGCCGAAATAG 59.322 50.000 10.87 0.00 34.69 1.73
2273 2311 0.536460 GGTTGAGGTTCAGGCCGAAA 60.536 55.000 10.87 0.35 34.69 3.46
2312 2350 1.585521 GATGAGGGTGTACGCGACG 60.586 63.158 15.93 0.00 0.00 5.12
2417 2455 0.388520 CGTGACCGAGCTTCACATCA 60.389 55.000 15.46 1.31 43.09 3.07
2470 2508 0.175531 TTGAAGATGCGATCGAGCCA 59.824 50.000 21.57 7.94 36.02 4.75
2476 2514 4.569966 ACAGAATGAGTTGAAGATGCGATC 59.430 41.667 0.00 0.00 39.69 3.69
2483 2521 4.997395 GGCAGTTACAGAATGAGTTGAAGA 59.003 41.667 0.00 0.00 39.69 2.87
2491 2529 4.530710 ACGTTAGGCAGTTACAGAATGA 57.469 40.909 0.00 0.00 39.69 2.57
2498 2536 1.730612 GAGGCAACGTTAGGCAGTTAC 59.269 52.381 20.34 2.58 46.39 2.50
2544 2582 6.261381 ACGGACAATGTTAGTCTTGCTAAAAA 59.739 34.615 0.00 0.00 40.94 1.94
2555 2593 3.682858 GCATACACACGGACAATGTTAGT 59.317 43.478 0.00 0.00 0.00 2.24
2568 2606 4.436050 CCTGTGAAGAAATCGCATACACAC 60.436 45.833 0.00 0.00 46.90 3.82
2982 3029 1.219393 CTTCTCGAAGGTGCCCTCC 59.781 63.158 0.00 0.00 34.87 4.30
3087 3134 3.068064 TGCATCCTCGCGTCCAGA 61.068 61.111 5.77 0.00 33.35 3.86
3100 3147 0.107312 CTGAAGTAGCTGGCCTGCAT 60.107 55.000 32.96 20.91 34.99 3.96
3147 3194 2.365293 GGAGGTGTTCCATTGCTTGTTT 59.635 45.455 0.00 0.00 46.01 2.83
3211 3265 1.221840 CAACCCGTGAGCTGGCTAT 59.778 57.895 0.00 0.00 0.00 2.97
3252 3314 4.517832 AGTAACGCATTGATCATGATGCAT 59.482 37.500 24.86 17.56 46.87 3.96
3265 3327 0.909623 AGCCCCTACAGTAACGCATT 59.090 50.000 0.00 0.00 0.00 3.56
3402 3464 2.612212 AGTTCTACATAAAATGCGGCCG 59.388 45.455 24.05 24.05 0.00 6.13
3459 3521 4.592942 ACTATCTTTGGAATGCAGCTTGA 58.407 39.130 0.00 0.00 0.00 3.02
3592 3656 9.496873 TGAATAATCTAACAGTTTTTCTTCCGA 57.503 29.630 0.00 0.00 0.00 4.55
3593 3657 9.760660 CTGAATAATCTAACAGTTTTTCTTCCG 57.239 33.333 0.00 0.00 0.00 4.30
3737 3859 4.918588 ACTCAACCAATAAATCGGTTCCT 58.081 39.130 0.00 0.00 43.72 3.36
3738 3860 5.638596 AACTCAACCAATAAATCGGTTCC 57.361 39.130 0.00 0.00 43.72 3.62
3773 3897 6.588204 TGTATGTGGCTATACCCTGTAAAAG 58.412 40.000 9.07 0.00 37.83 2.27
3776 3900 5.247564 GGATGTATGTGGCTATACCCTGTAA 59.752 44.000 9.07 0.00 37.83 2.41
3799 3923 1.544691 ACTTGTACTAGTGTGCTCCGG 59.455 52.381 9.25 0.00 0.00 5.14
3807 3931 7.713942 ACCCAAAGAGTAAAACTTGTACTAGTG 59.286 37.037 10.78 0.00 31.88 2.74
3904 4028 0.904394 CAAAGGGGTTCATGGTGGGG 60.904 60.000 0.00 0.00 0.00 4.96
3908 4032 2.490902 GGTTCTCAAAGGGGTTCATGGT 60.491 50.000 0.00 0.00 0.00 3.55
3910 4034 3.160679 AGGTTCTCAAAGGGGTTCATG 57.839 47.619 0.00 0.00 0.00 3.07
3911 4035 3.903530 AAGGTTCTCAAAGGGGTTCAT 57.096 42.857 0.00 0.00 0.00 2.57
3912 4036 5.076873 CAATAAGGTTCTCAAAGGGGTTCA 58.923 41.667 0.00 0.00 0.00 3.18
3922 4537 8.635765 AGTTTTGATTAGCAATAAGGTTCTCA 57.364 30.769 0.00 0.00 36.15 3.27
3934 4549 3.255642 GGCTTGTGGAGTTTTGATTAGCA 59.744 43.478 0.00 0.00 0.00 3.49
3967 4582 3.628989 TAGCATGCCCACGCTAGT 58.371 55.556 15.66 0.00 39.70 2.57
3969 4584 2.108976 GCTAGCATGCCCACGCTA 59.891 61.111 15.66 0.00 39.70 4.26
3970 4585 4.100084 TGCTAGCATGCCCACGCT 62.100 61.111 14.93 0.00 42.34 5.07
3972 4587 3.566853 CGTGCTAGCATGCCCACG 61.567 66.667 29.02 29.02 43.83 4.94
3979 4594 0.389817 TTTGTCGCTCGTGCTAGCAT 60.390 50.000 22.51 0.00 42.91 3.79
3988 4603 3.001330 GGATATGTTCCTTTTGTCGCTCG 59.999 47.826 0.00 0.00 41.78 5.03
4008 4623 2.757950 GCAGATGGAGGGAGTAGATGGA 60.758 54.545 0.00 0.00 0.00 3.41
4009 4624 1.622811 GCAGATGGAGGGAGTAGATGG 59.377 57.143 0.00 0.00 0.00 3.51
4010 4625 1.271934 CGCAGATGGAGGGAGTAGATG 59.728 57.143 0.00 0.00 0.00 2.90
4011 4626 1.145945 TCGCAGATGGAGGGAGTAGAT 59.854 52.381 0.00 0.00 0.00 1.98
4012 4627 0.551396 TCGCAGATGGAGGGAGTAGA 59.449 55.000 0.00 0.00 0.00 2.59
4013 4628 1.403814 TTCGCAGATGGAGGGAGTAG 58.596 55.000 0.00 0.00 35.04 2.57
4014 4629 1.757118 CTTTCGCAGATGGAGGGAGTA 59.243 52.381 0.00 0.00 35.04 2.59
4015 4630 0.539051 CTTTCGCAGATGGAGGGAGT 59.461 55.000 0.00 0.00 35.04 3.85
4016 4631 0.826715 TCTTTCGCAGATGGAGGGAG 59.173 55.000 0.00 0.00 35.04 4.30
4017 4632 0.537188 GTCTTTCGCAGATGGAGGGA 59.463 55.000 0.00 0.00 35.04 4.20
4018 4633 0.539051 AGTCTTTCGCAGATGGAGGG 59.461 55.000 0.00 0.00 35.04 4.30
4019 4634 1.649664 CAGTCTTTCGCAGATGGAGG 58.350 55.000 0.00 0.00 35.04 4.30
4020 4635 1.005340 GCAGTCTTTCGCAGATGGAG 58.995 55.000 0.00 0.00 35.04 3.86
4021 4636 0.737367 CGCAGTCTTTCGCAGATGGA 60.737 55.000 0.00 0.00 35.04 3.41
4028 4643 0.368907 TTAATCGCGCAGTCTTTCGC 59.631 50.000 8.75 6.25 46.98 4.70
4088 4703 5.582665 GTGAATCTTGACTTAGACATGTCCC 59.417 44.000 22.21 7.42 32.67 4.46
4111 4726 7.342799 ACCATAACTTTCCTATCAATGCATTGT 59.657 33.333 32.67 23.45 38.84 2.71
4137 4758 2.031012 CACCTCAAGTCGCAGCCA 59.969 61.111 0.00 0.00 0.00 4.75
4146 4767 2.483876 TCGAAGCTTCAACACCTCAAG 58.516 47.619 25.47 5.86 0.00 3.02
4154 4775 1.740025 CCCTTCCATCGAAGCTTCAAC 59.260 52.381 25.47 0.05 43.66 3.18
4166 4787 3.264193 TCGCATCTAATATGCCCTTCCAT 59.736 43.478 4.50 0.00 41.71 3.41
4169 4790 4.507710 TCATCGCATCTAATATGCCCTTC 58.492 43.478 4.50 0.00 41.71 3.46
4175 4796 7.955864 CACACAATCTTCATCGCATCTAATATG 59.044 37.037 0.00 0.00 0.00 1.78
4179 4800 4.034394 GCACACAATCTTCATCGCATCTAA 59.966 41.667 0.00 0.00 0.00 2.10
4181 4802 2.353889 GCACACAATCTTCATCGCATCT 59.646 45.455 0.00 0.00 0.00 2.90
4198 4819 0.036164 GTCACCATACACCTGGCACA 59.964 55.000 0.00 0.00 40.15 4.57
4247 4868 3.067091 CAGTCCTCCAGTGCTGCT 58.933 61.111 0.00 0.00 0.00 4.24
4266 4887 1.946768 TCGAGAAGCACCACCAAAAAG 59.053 47.619 0.00 0.00 0.00 2.27
4281 4902 5.006844 GTGAATCGAGACTCAGTATTCGAGA 59.993 44.000 16.37 4.11 44.14 4.04
4287 4908 3.634448 CCCTGTGAATCGAGACTCAGTAT 59.366 47.826 16.55 0.00 0.00 2.12
4291 4912 1.924731 ACCCTGTGAATCGAGACTCA 58.075 50.000 2.82 0.00 0.00 3.41
4304 4925 3.408157 AACCTTGGGTTTTTACCCTGT 57.592 42.857 14.10 6.46 44.33 4.00
4324 4945 3.829601 CAGGTACAACCAATAAAGGCCAA 59.170 43.478 5.01 0.00 41.95 4.52
4406 5028 4.158949 TCGTTACCCGATTGAAGATCTTGA 59.841 41.667 14.00 0.14 41.60 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.