Multiple sequence alignment - TraesCS3B01G351600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G351600 chr3B 100.000 3626 0 0 1 3626 561546511 561542886 0.000000e+00 6697.0
1 TraesCS3B01G351600 chr3B 74.614 453 93 18 23 460 683837616 683837171 2.880000e-41 180.0
2 TraesCS3B01G351600 chr3B 81.340 209 32 4 265 466 716343135 716343343 2.900000e-36 163.0
3 TraesCS3B01G351600 chr3B 85.075 67 10 0 1388 1454 115248489 115248423 6.500000e-08 69.4
4 TraesCS3B01G351600 chr3D 94.150 2154 73 19 619 2757 429612131 429610016 0.000000e+00 3230.0
5 TraesCS3B01G351600 chr3D 91.023 557 29 7 2748 3283 429606641 429606085 0.000000e+00 732.0
6 TraesCS3B01G351600 chr3D 93.651 189 9 2 3438 3626 429606081 429605896 2.760000e-71 279.0
7 TraesCS3B01G351600 chr3A 95.532 1813 69 7 1389 3190 556455102 556456913 0.000000e+00 2889.0
8 TraesCS3B01G351600 chr3A 88.560 778 41 18 619 1390 556454206 556454941 0.000000e+00 900.0
9 TraesCS3B01G351600 chr3A 92.713 247 14 3 3205 3449 556457067 556457311 1.600000e-93 353.0
10 TraesCS3B01G351600 chr3A 92.179 179 11 2 3448 3626 556457472 556457647 2.160000e-62 250.0
11 TraesCS3B01G351600 chr3A 75.391 256 47 16 16 259 222359991 222360242 3.830000e-20 110.0
12 TraesCS3B01G351600 chr3A 85.263 95 13 1 1372 1466 639236780 639236687 2.980000e-16 97.1
13 TraesCS3B01G351600 chr5D 86.188 181 17 5 265 437 519092173 519091993 4.780000e-44 189.0
14 TraesCS3B01G351600 chr5D 80.159 252 45 4 2298 2548 55638811 55638564 2.220000e-42 183.0
15 TraesCS3B01G351600 chr5D 82.857 210 28 7 265 466 99351653 99351862 8.000000e-42 182.0
16 TraesCS3B01G351600 chr5D 84.615 182 22 4 265 441 319115309 319115489 3.720000e-40 176.0
17 TraesCS3B01G351600 chr5D 80.451 133 16 7 56 181 40098763 40098634 3.860000e-15 93.5
18 TraesCS3B01G351600 chr2A 77.381 336 56 15 130 447 654370600 654370267 8.000000e-42 182.0
19 TraesCS3B01G351600 chr2A 77.003 287 50 13 158 436 756923015 756923293 2.260000e-32 150.0
20 TraesCS3B01G351600 chr2A 83.200 125 19 2 56 179 89117334 89117211 2.960000e-21 113.0
21 TraesCS3B01G351600 chr2A 81.746 126 19 3 133 258 700970557 700970678 6.410000e-18 102.0
22 TraesCS3B01G351600 chr2A 84.058 69 11 0 1392 1460 237313128 237313196 2.340000e-07 67.6
23 TraesCS3B01G351600 chr5B 79.231 260 50 4 2298 2557 58428758 58429013 1.030000e-40 178.0
24 TraesCS3B01G351600 chr5B 81.553 206 28 8 265 460 384600954 384601159 1.040000e-35 161.0
25 TraesCS3B01G351600 chr5B 76.168 214 37 10 67 268 261184253 261184464 2.300000e-17 100.0
26 TraesCS3B01G351600 chr5B 81.250 128 21 2 134 259 684147159 684147033 2.300000e-17 100.0
27 TraesCS3B01G351600 chr6D 82.927 205 25 7 265 460 446423764 446423967 3.720000e-40 176.0
28 TraesCS3B01G351600 chr6D 84.058 69 11 0 1392 1460 221617458 221617390 2.340000e-07 67.6
29 TraesCS3B01G351600 chr7B 81.863 204 29 4 265 460 586655283 586655486 8.050000e-37 165.0
30 TraesCS3B01G351600 chr7B 100.000 28 0 0 1312 1339 729248552 729248579 7.000000e-03 52.8
31 TraesCS3B01G351600 chr6B 73.932 468 93 19 25 466 702186116 702185652 1.040000e-35 161.0
32 TraesCS3B01G351600 chr6B 74.179 457 78 26 28 460 332424918 332425358 1.740000e-33 154.0
33 TraesCS3B01G351600 chr2D 73.951 453 90 22 22 460 363476069 363476507 1.350000e-34 158.0
34 TraesCS3B01G351600 chr2D 83.582 67 11 0 1392 1458 300244078 300244144 3.020000e-06 63.9
35 TraesCS3B01G351600 chr1B 80.392 204 32 6 265 460 272877725 272877928 8.110000e-32 148.0
36 TraesCS3B01G351600 chr1B 74.274 241 50 10 29 259 100124112 100123874 1.390000e-14 91.6
37 TraesCS3B01G351600 chrUn 76.569 239 40 15 30 259 7639032 7639263 2.290000e-22 117.0
38 TraesCS3B01G351600 chrUn 100.000 28 0 0 1312 1339 266897011 266897038 7.000000e-03 52.8
39 TraesCS3B01G351600 chrUn 100.000 28 0 0 1312 1339 266905837 266905864 7.000000e-03 52.8
40 TraesCS3B01G351600 chr4A 79.141 163 31 3 29 189 549870078 549869917 3.830000e-20 110.0
41 TraesCS3B01G351600 chr2B 77.209 215 32 15 56 259 648907222 648907014 3.830000e-20 110.0
42 TraesCS3B01G351600 chr2B 76.774 155 29 5 31 179 694047117 694047270 3.000000e-11 80.5
43 TraesCS3B01G351600 chr7A 76.374 182 28 13 11 179 66450534 66450713 2.320000e-12 84.2
44 TraesCS3B01G351600 chr7D 83.333 72 12 0 1389 1460 310372601 310372672 2.340000e-07 67.6
45 TraesCS3B01G351600 chr4D 89.583 48 5 0 1392 1439 275519796 275519843 1.090000e-05 62.1
46 TraesCS3B01G351600 chr1A 84.746 59 3 5 1282 1339 375116866 375116813 2.000000e-03 54.7
47 TraesCS3B01G351600 chr1D 100.000 28 0 0 1312 1339 300722514 300722487 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G351600 chr3B 561542886 561546511 3625 True 6697.000000 6697 100.000000 1 3626 1 chr3B.!!$R2 3625
1 TraesCS3B01G351600 chr3D 429605896 429612131 6235 True 1413.666667 3230 92.941333 619 3626 3 chr3D.!!$R1 3007
2 TraesCS3B01G351600 chr3A 556454206 556457647 3441 False 1098.000000 2889 92.246000 619 3626 4 chr3A.!!$F2 3007

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
342 343 0.038983 TGACGCGAGAAATCCAACGA 60.039 50.0 15.93 0.00 0.00 3.85 F
492 493 0.179073 ATGATTTCAGGCCGGTCTCG 60.179 55.0 5.00 1.64 0.00 4.04 F
506 507 0.179097 GTCTCGAGCCTAGGCCTTTG 60.179 60.0 30.42 16.54 43.17 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2292 2471 0.038599 TGCTCACAATCTGCACCCAT 59.961 50.000 0.0 0.0 0.0 4.00 R
2535 2714 1.522806 GTCACCCTGCACACGAACA 60.523 57.895 0.0 0.0 0.0 3.18 R
2667 2846 3.469739 GAAGAGGAGGGAGTACTACGAG 58.530 54.545 0.0 0.0 0.0 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 7.681939 TTTTTACTTTCACGAGAGGCATAAT 57.318 32.000 0.00 0.00 0.00 1.28
56 57 7.681939 TTTTACTTTCACGAGAGGCATAATT 57.318 32.000 0.00 0.00 0.00 1.40
57 58 7.681939 TTTACTTTCACGAGAGGCATAATTT 57.318 32.000 0.00 0.00 0.00 1.82
58 59 5.551760 ACTTTCACGAGAGGCATAATTTG 57.448 39.130 0.00 0.00 0.00 2.32
86 87 3.686016 TGAGAGGCATGGTTTTACTTCC 58.314 45.455 0.00 0.00 0.00 3.46
87 88 2.678336 GAGAGGCATGGTTTTACTTCCG 59.322 50.000 0.00 0.00 0.00 4.30
88 89 1.743394 GAGGCATGGTTTTACTTCCGG 59.257 52.381 0.00 0.00 0.00 5.14
89 90 0.172578 GGCATGGTTTTACTTCCGGC 59.827 55.000 0.00 0.00 0.00 6.13
90 91 0.179174 GCATGGTTTTACTTCCGGCG 60.179 55.000 0.00 0.00 0.00 6.46
91 92 1.444836 CATGGTTTTACTTCCGGCGA 58.555 50.000 9.30 0.00 0.00 5.54
92 93 1.396996 CATGGTTTTACTTCCGGCGAG 59.603 52.381 9.30 0.00 0.00 5.03
93 94 0.680618 TGGTTTTACTTCCGGCGAGA 59.319 50.000 9.30 0.12 0.00 4.04
94 95 1.337447 TGGTTTTACTTCCGGCGAGAG 60.337 52.381 9.30 8.31 0.00 3.20
95 96 1.356938 GTTTTACTTCCGGCGAGAGG 58.643 55.000 9.30 7.23 0.00 3.69
96 97 0.971386 TTTTACTTCCGGCGAGAGGT 59.029 50.000 9.30 13.13 0.00 3.85
97 98 0.245539 TTTACTTCCGGCGAGAGGTG 59.754 55.000 9.30 1.52 0.00 4.00
98 99 2.221906 TTACTTCCGGCGAGAGGTGC 62.222 60.000 9.30 0.00 0.00 5.01
106 107 4.477975 CGAGAGGTGCGGTCGTCC 62.478 72.222 0.00 0.00 0.00 4.79
107 108 4.131088 GAGAGGTGCGGTCGTCCC 62.131 72.222 0.00 0.00 0.00 4.46
108 109 4.680537 AGAGGTGCGGTCGTCCCT 62.681 66.667 0.00 3.38 0.00 4.20
109 110 4.131088 GAGGTGCGGTCGTCCCTC 62.131 72.222 12.16 12.16 36.98 4.30
110 111 4.680537 AGGTGCGGTCGTCCCTCT 62.681 66.667 0.00 0.00 0.00 3.69
111 112 4.131088 GGTGCGGTCGTCCCTCTC 62.131 72.222 0.00 0.00 0.00 3.20
112 113 3.371063 GTGCGGTCGTCCCTCTCA 61.371 66.667 0.00 0.00 0.00 3.27
113 114 2.599281 TGCGGTCGTCCCTCTCAA 60.599 61.111 0.00 0.00 0.00 3.02
114 115 2.204461 TGCGGTCGTCCCTCTCAAA 61.204 57.895 0.00 0.00 0.00 2.69
115 116 1.005394 GCGGTCGTCCCTCTCAAAA 60.005 57.895 0.00 0.00 0.00 2.44
116 117 0.601841 GCGGTCGTCCCTCTCAAAAA 60.602 55.000 0.00 0.00 0.00 1.94
117 118 1.145803 CGGTCGTCCCTCTCAAAAAC 58.854 55.000 0.00 0.00 0.00 2.43
118 119 1.145803 GGTCGTCCCTCTCAAAAACG 58.854 55.000 0.00 0.00 34.80 3.60
119 120 1.269936 GGTCGTCCCTCTCAAAAACGA 60.270 52.381 0.00 0.00 39.77 3.85
120 121 2.476821 GTCGTCCCTCTCAAAAACGAA 58.523 47.619 0.00 0.00 43.13 3.85
121 122 2.867975 GTCGTCCCTCTCAAAAACGAAA 59.132 45.455 0.00 0.00 43.13 3.46
122 123 3.310501 GTCGTCCCTCTCAAAAACGAAAA 59.689 43.478 0.00 0.00 43.13 2.29
123 124 3.940221 TCGTCCCTCTCAAAAACGAAAAA 59.060 39.130 0.00 0.00 39.19 1.94
156 157 4.424061 TTTTCTTTCATGAGATGCACGG 57.576 40.909 0.00 0.00 0.00 4.94
157 158 2.768253 TCTTTCATGAGATGCACGGT 57.232 45.000 0.00 0.00 0.00 4.83
158 159 3.057969 TCTTTCATGAGATGCACGGTT 57.942 42.857 0.00 0.00 0.00 4.44
159 160 3.411446 TCTTTCATGAGATGCACGGTTT 58.589 40.909 0.00 0.00 0.00 3.27
160 161 3.820467 TCTTTCATGAGATGCACGGTTTT 59.180 39.130 0.00 0.00 0.00 2.43
161 162 3.557577 TTCATGAGATGCACGGTTTTG 57.442 42.857 0.00 0.00 0.00 2.44
162 163 1.199789 TCATGAGATGCACGGTTTTGC 59.800 47.619 0.00 0.00 43.31 3.68
163 164 1.200716 CATGAGATGCACGGTTTTGCT 59.799 47.619 0.00 0.00 43.41 3.91
164 165 1.317613 TGAGATGCACGGTTTTGCTT 58.682 45.000 0.00 0.00 43.41 3.91
165 166 1.680735 TGAGATGCACGGTTTTGCTTT 59.319 42.857 0.00 0.00 43.41 3.51
166 167 2.287547 TGAGATGCACGGTTTTGCTTTC 60.288 45.455 0.00 0.00 43.41 2.62
167 168 1.052287 GATGCACGGTTTTGCTTTCG 58.948 50.000 0.00 0.00 43.41 3.46
168 169 0.939106 ATGCACGGTTTTGCTTTCGC 60.939 50.000 0.00 0.00 43.41 4.70
169 170 2.635305 GCACGGTTTTGCTTTCGCG 61.635 57.895 0.00 0.00 39.59 5.87
170 171 1.010574 CACGGTTTTGCTTTCGCGA 60.011 52.632 3.71 3.71 39.65 5.87
171 172 0.991770 CACGGTTTTGCTTTCGCGAG 60.992 55.000 9.59 0.00 39.65 5.03
172 173 1.155424 ACGGTTTTGCTTTCGCGAGA 61.155 50.000 9.59 3.35 39.65 4.04
173 174 0.451135 CGGTTTTGCTTTCGCGAGAG 60.451 55.000 21.42 21.42 43.69 3.20
174 175 0.110192 GGTTTTGCTTTCGCGAGAGG 60.110 55.000 25.84 13.55 43.69 3.69
175 176 0.726118 GTTTTGCTTTCGCGAGAGGC 60.726 55.000 25.84 21.76 43.69 4.70
176 177 1.163420 TTTTGCTTTCGCGAGAGGCA 61.163 50.000 25.84 23.78 44.45 4.75
177 178 1.841663 TTTGCTTTCGCGAGAGGCAC 61.842 55.000 25.84 11.56 45.26 5.01
178 179 3.843240 GCTTTCGCGAGAGGCACG 61.843 66.667 25.84 3.72 43.84 5.34
179 180 2.126463 CTTTCGCGAGAGGCACGA 60.126 61.111 18.35 0.00 43.84 4.35
180 181 2.430244 TTTCGCGAGAGGCACGAC 60.430 61.111 9.59 0.00 43.84 4.34
181 182 2.804368 CTTTCGCGAGAGGCACGACT 62.804 60.000 18.35 0.00 43.84 4.18
182 183 2.416244 TTTCGCGAGAGGCACGACTT 62.416 55.000 9.59 0.00 43.84 3.01
183 184 2.416244 TTCGCGAGAGGCACGACTTT 62.416 55.000 9.59 0.00 43.84 2.66
184 185 2.720758 CGCGAGAGGCACGACTTTG 61.721 63.158 0.00 0.00 43.84 2.77
185 186 3.016474 GCGAGAGGCACGACTTTGC 62.016 63.158 0.00 0.00 42.87 3.68
186 187 1.373497 CGAGAGGCACGACTTTGCT 60.373 57.895 0.00 0.00 42.56 3.91
187 188 0.946221 CGAGAGGCACGACTTTGCTT 60.946 55.000 0.00 0.00 42.56 3.91
188 189 0.793250 GAGAGGCACGACTTTGCTTC 59.207 55.000 0.28 0.28 46.31 3.86
189 190 0.603975 AGAGGCACGACTTTGCTTCC 60.604 55.000 4.54 0.00 46.96 3.46
190 191 1.901650 GAGGCACGACTTTGCTTCCG 61.902 60.000 0.00 0.00 41.54 4.30
191 192 2.251642 GGCACGACTTTGCTTCCGT 61.252 57.895 0.00 0.00 42.56 4.69
194 195 2.900528 ACGACTTTGCTTCCGTGAG 58.099 52.632 0.00 0.00 33.69 3.51
195 196 0.387929 ACGACTTTGCTTCCGTGAGA 59.612 50.000 0.00 0.00 33.69 3.27
196 197 1.063806 CGACTTTGCTTCCGTGAGAG 58.936 55.000 0.00 0.00 0.00 3.20
197 198 1.433534 GACTTTGCTTCCGTGAGAGG 58.566 55.000 0.00 0.00 0.00 3.69
201 202 3.805267 GCTTCCGTGAGAGGCATG 58.195 61.111 0.00 0.00 46.54 4.06
207 208 2.686602 CGTGAGAGGCATGGATGTG 58.313 57.895 0.00 0.00 0.00 3.21
208 209 1.434622 CGTGAGAGGCATGGATGTGC 61.435 60.000 0.00 0.00 44.31 4.57
209 210 0.393402 GTGAGAGGCATGGATGTGCA 60.393 55.000 0.00 0.00 46.81 4.57
210 211 0.549469 TGAGAGGCATGGATGTGCAT 59.451 50.000 0.00 0.00 46.81 3.96
213 214 3.416253 AGGCATGGATGTGCATCTC 57.584 52.632 11.39 3.65 46.81 2.75
214 215 0.534427 AGGCATGGATGTGCATCTCG 60.534 55.000 11.39 2.90 46.81 4.04
215 216 0.533531 GGCATGGATGTGCATCTCGA 60.534 55.000 11.39 0.00 46.81 4.04
216 217 1.302366 GCATGGATGTGCATCTCGAA 58.698 50.000 11.39 0.00 44.43 3.71
217 218 1.672363 GCATGGATGTGCATCTCGAAA 59.328 47.619 11.39 0.00 44.43 3.46
218 219 2.097954 GCATGGATGTGCATCTCGAAAA 59.902 45.455 11.39 0.00 44.43 2.29
219 220 3.791122 GCATGGATGTGCATCTCGAAAAG 60.791 47.826 11.39 0.00 44.43 2.27
220 221 2.358957 TGGATGTGCATCTCGAAAAGG 58.641 47.619 11.39 0.00 37.92 3.11
221 222 1.672881 GGATGTGCATCTCGAAAAGGG 59.327 52.381 11.39 0.00 37.92 3.95
222 223 2.632377 GATGTGCATCTCGAAAAGGGA 58.368 47.619 5.02 0.00 35.04 4.20
223 224 2.559698 TGTGCATCTCGAAAAGGGAA 57.440 45.000 0.00 0.00 29.93 3.97
224 225 2.857483 TGTGCATCTCGAAAAGGGAAA 58.143 42.857 0.00 0.00 29.93 3.13
225 226 3.218453 TGTGCATCTCGAAAAGGGAAAA 58.782 40.909 0.00 0.00 29.93 2.29
226 227 3.634448 TGTGCATCTCGAAAAGGGAAAAA 59.366 39.130 0.00 0.00 29.93 1.94
257 258 9.796120 ATTTTATTTATTTTTCATTCCGCGAGA 57.204 25.926 8.23 0.00 0.00 4.04
258 259 8.835467 TTTATTTATTTTTCATTCCGCGAGAG 57.165 30.769 8.23 0.00 0.00 3.20
295 296 3.572604 AAAAACGTTCGTCAAAACCCA 57.427 38.095 0.00 0.00 0.00 4.51
296 297 3.786516 AAAACGTTCGTCAAAACCCAT 57.213 38.095 0.00 0.00 0.00 4.00
297 298 3.786516 AAACGTTCGTCAAAACCCATT 57.213 38.095 0.00 0.00 0.00 3.16
298 299 4.897025 AAACGTTCGTCAAAACCCATTA 57.103 36.364 0.00 0.00 0.00 1.90
299 300 4.897025 AACGTTCGTCAAAACCCATTAA 57.103 36.364 0.00 0.00 0.00 1.40
300 301 4.213596 ACGTTCGTCAAAACCCATTAAC 57.786 40.909 0.00 0.00 0.00 2.01
301 302 3.219981 CGTTCGTCAAAACCCATTAACG 58.780 45.455 0.00 0.00 33.79 3.18
302 303 3.303263 CGTTCGTCAAAACCCATTAACGT 60.303 43.478 0.00 0.00 35.14 3.99
303 304 3.881780 TCGTCAAAACCCATTAACGTG 57.118 42.857 0.00 0.00 34.03 4.49
304 305 2.548904 TCGTCAAAACCCATTAACGTGG 59.451 45.455 0.00 0.00 39.05 4.94
315 316 5.291293 CCATTAACGTGGGTCTAGTTTTG 57.709 43.478 0.00 0.00 35.55 2.44
316 317 4.998672 CCATTAACGTGGGTCTAGTTTTGA 59.001 41.667 0.00 0.00 35.55 2.69
317 318 5.470777 CCATTAACGTGGGTCTAGTTTTGAA 59.529 40.000 0.00 0.00 35.55 2.69
318 319 6.348213 CCATTAACGTGGGTCTAGTTTTGAAG 60.348 42.308 0.00 0.00 35.55 3.02
319 320 4.411256 AACGTGGGTCTAGTTTTGAAGA 57.589 40.909 0.00 0.00 0.00 2.87
320 321 4.618920 ACGTGGGTCTAGTTTTGAAGAT 57.381 40.909 0.00 0.00 0.00 2.40
321 322 4.566987 ACGTGGGTCTAGTTTTGAAGATC 58.433 43.478 0.00 0.00 0.00 2.75
322 323 4.283722 ACGTGGGTCTAGTTTTGAAGATCT 59.716 41.667 0.00 0.00 0.00 2.75
323 324 5.221661 ACGTGGGTCTAGTTTTGAAGATCTT 60.222 40.000 7.95 7.95 0.00 2.40
324 325 5.120830 CGTGGGTCTAGTTTTGAAGATCTTG 59.879 44.000 14.00 0.00 0.00 3.02
325 326 6.231211 GTGGGTCTAGTTTTGAAGATCTTGA 58.769 40.000 14.00 0.14 0.00 3.02
326 327 6.147985 GTGGGTCTAGTTTTGAAGATCTTGAC 59.852 42.308 14.00 10.81 34.07 3.18
327 328 5.348997 GGGTCTAGTTTTGAAGATCTTGACG 59.651 44.000 14.00 0.00 35.03 4.35
328 329 5.163943 GGTCTAGTTTTGAAGATCTTGACGC 60.164 44.000 14.00 0.00 35.03 5.19
329 330 3.795561 AGTTTTGAAGATCTTGACGCG 57.204 42.857 14.00 3.53 0.00 6.01
330 331 3.390135 AGTTTTGAAGATCTTGACGCGA 58.610 40.909 15.93 0.00 0.00 5.87
331 332 3.430218 AGTTTTGAAGATCTTGACGCGAG 59.570 43.478 15.93 0.00 0.00 5.03
332 333 3.297830 TTTGAAGATCTTGACGCGAGA 57.702 42.857 15.93 5.60 0.00 4.04
333 334 3.297830 TTGAAGATCTTGACGCGAGAA 57.702 42.857 15.93 3.40 0.00 2.87
334 335 3.297830 TGAAGATCTTGACGCGAGAAA 57.702 42.857 15.93 2.55 0.00 2.52
335 336 3.849911 TGAAGATCTTGACGCGAGAAAT 58.150 40.909 15.93 0.00 0.00 2.17
336 337 3.859961 TGAAGATCTTGACGCGAGAAATC 59.140 43.478 15.93 9.04 0.00 2.17
337 338 2.815478 AGATCTTGACGCGAGAAATCC 58.185 47.619 15.93 0.00 0.00 3.01
338 339 2.166459 AGATCTTGACGCGAGAAATCCA 59.834 45.455 15.93 0.00 0.00 3.41
339 340 2.448926 TCTTGACGCGAGAAATCCAA 57.551 45.000 15.93 4.16 0.00 3.53
340 341 2.066262 TCTTGACGCGAGAAATCCAAC 58.934 47.619 15.93 0.00 0.00 3.77
341 342 0.787787 TTGACGCGAGAAATCCAACG 59.212 50.000 15.93 0.00 0.00 4.10
342 343 0.038983 TGACGCGAGAAATCCAACGA 60.039 50.000 15.93 0.00 0.00 3.85
343 344 1.278238 GACGCGAGAAATCCAACGAT 58.722 50.000 15.93 0.00 0.00 3.73
344 345 0.999406 ACGCGAGAAATCCAACGATG 59.001 50.000 15.93 0.00 0.00 3.84
360 361 6.859715 CAACGATGGATTTGAGATTTGAAC 57.140 37.500 0.00 0.00 0.00 3.18
361 362 5.221891 ACGATGGATTTGAGATTTGAACG 57.778 39.130 0.00 0.00 0.00 3.95
362 363 4.031028 CGATGGATTTGAGATTTGAACGC 58.969 43.478 0.00 0.00 0.00 4.84
363 364 4.437255 CGATGGATTTGAGATTTGAACGCA 60.437 41.667 0.00 0.00 0.00 5.24
364 365 5.585390 GATGGATTTGAGATTTGAACGCAT 58.415 37.500 0.00 0.00 0.00 4.73
365 366 4.735985 TGGATTTGAGATTTGAACGCATG 58.264 39.130 0.00 0.00 0.00 4.06
366 367 4.107622 GGATTTGAGATTTGAACGCATGG 58.892 43.478 0.00 0.00 0.00 3.66
367 368 4.380867 GGATTTGAGATTTGAACGCATGGT 60.381 41.667 0.00 0.00 0.00 3.55
368 369 4.582701 TTTGAGATTTGAACGCATGGTT 57.417 36.364 0.00 0.00 42.96 3.67
369 370 4.582701 TTGAGATTTGAACGCATGGTTT 57.417 36.364 0.00 0.00 39.50 3.27
370 371 5.697473 TTGAGATTTGAACGCATGGTTTA 57.303 34.783 0.00 0.00 39.50 2.01
371 372 5.697473 TGAGATTTGAACGCATGGTTTAA 57.303 34.783 0.00 0.00 39.50 1.52
372 373 5.698832 TGAGATTTGAACGCATGGTTTAAG 58.301 37.500 0.00 0.00 39.50 1.85
373 374 5.471797 TGAGATTTGAACGCATGGTTTAAGA 59.528 36.000 0.00 0.00 39.50 2.10
374 375 5.942872 AGATTTGAACGCATGGTTTAAGAG 58.057 37.500 0.00 0.00 39.50 2.85
375 376 5.705441 AGATTTGAACGCATGGTTTAAGAGA 59.295 36.000 0.00 0.00 39.50 3.10
376 377 5.957842 TTTGAACGCATGGTTTAAGAGAT 57.042 34.783 0.00 0.00 39.50 2.75
377 378 7.552687 AGATTTGAACGCATGGTTTAAGAGATA 59.447 33.333 0.00 0.00 39.50 1.98
378 379 7.441890 TTTGAACGCATGGTTTAAGAGATAA 57.558 32.000 0.00 0.00 39.50 1.75
379 380 7.441890 TTGAACGCATGGTTTAAGAGATAAA 57.558 32.000 0.00 0.00 39.50 1.40
380 381 7.441890 TGAACGCATGGTTTAAGAGATAAAA 57.558 32.000 0.00 0.00 39.50 1.52
381 382 8.050778 TGAACGCATGGTTTAAGAGATAAAAT 57.949 30.769 0.00 0.00 39.50 1.82
382 383 7.967854 TGAACGCATGGTTTAAGAGATAAAATG 59.032 33.333 0.00 0.00 39.50 2.32
383 384 7.391148 ACGCATGGTTTAAGAGATAAAATGT 57.609 32.000 0.00 0.00 35.33 2.71
384 385 7.826690 ACGCATGGTTTAAGAGATAAAATGTT 58.173 30.769 0.00 0.00 35.33 2.71
385 386 8.303876 ACGCATGGTTTAAGAGATAAAATGTTT 58.696 29.630 0.00 0.00 35.33 2.83
386 387 9.139174 CGCATGGTTTAAGAGATAAAATGTTTT 57.861 29.630 0.00 0.00 35.33 2.43
434 435 6.619801 AAAAACTTCTAGATTGCGACAAGT 57.380 33.333 0.00 0.00 0.00 3.16
435 436 5.597813 AAACTTCTAGATTGCGACAAGTG 57.402 39.130 0.00 0.00 0.00 3.16
436 437 3.589988 ACTTCTAGATTGCGACAAGTGG 58.410 45.455 0.00 0.00 0.00 4.00
437 438 3.006967 ACTTCTAGATTGCGACAAGTGGT 59.993 43.478 0.00 0.00 0.00 4.16
438 439 2.959516 TCTAGATTGCGACAAGTGGTG 58.040 47.619 0.00 0.00 0.00 4.17
439 440 1.394917 CTAGATTGCGACAAGTGGTGC 59.605 52.381 0.00 0.00 0.00 5.01
440 441 0.534877 AGATTGCGACAAGTGGTGCA 60.535 50.000 0.00 0.00 33.65 4.57
441 442 0.523072 GATTGCGACAAGTGGTGCAT 59.477 50.000 0.00 0.00 34.86 3.96
442 443 1.737236 GATTGCGACAAGTGGTGCATA 59.263 47.619 0.00 0.00 34.86 3.14
443 444 1.819928 TTGCGACAAGTGGTGCATAT 58.180 45.000 0.00 0.00 34.86 1.78
444 445 1.085893 TGCGACAAGTGGTGCATATG 58.914 50.000 0.00 0.00 31.58 1.78
445 446 0.248215 GCGACAAGTGGTGCATATGC 60.248 55.000 21.09 21.09 42.50 3.14
459 460 4.078363 GCATATGCAACGTGTAACTTGT 57.922 40.909 22.84 0.00 41.59 3.16
460 461 4.472286 GCATATGCAACGTGTAACTTGTT 58.528 39.130 22.84 0.00 41.59 2.83
461 462 4.320690 GCATATGCAACGTGTAACTTGTTG 59.679 41.667 22.84 6.17 44.38 3.33
462 463 5.448438 CATATGCAACGTGTAACTTGTTGT 58.552 37.500 0.00 0.00 43.66 3.32
463 464 6.594886 CATATGCAACGTGTAACTTGTTGTA 58.405 36.000 0.00 7.63 43.66 2.41
464 465 4.941325 TGCAACGTGTAACTTGTTGTAA 57.059 36.364 10.70 0.45 43.66 2.41
465 466 4.649977 TGCAACGTGTAACTTGTTGTAAC 58.350 39.130 10.70 0.00 43.66 2.50
466 467 4.392445 TGCAACGTGTAACTTGTTGTAACT 59.608 37.500 10.70 0.00 43.66 2.24
467 468 4.959757 GCAACGTGTAACTTGTTGTAACTC 59.040 41.667 10.70 0.00 43.66 3.01
468 469 5.446206 GCAACGTGTAACTTGTTGTAACTCA 60.446 40.000 10.70 0.00 43.66 3.41
469 470 6.535811 CAACGTGTAACTTGTTGTAACTCAA 58.464 36.000 0.00 0.00 38.47 3.02
470 471 6.098367 ACGTGTAACTTGTTGTAACTCAAC 57.902 37.500 0.00 4.10 45.19 3.18
471 472 5.870978 ACGTGTAACTTGTTGTAACTCAACT 59.129 36.000 11.11 0.00 45.19 3.16
472 473 7.035004 ACGTGTAACTTGTTGTAACTCAACTA 58.965 34.615 11.11 4.08 45.19 2.24
473 474 7.545265 ACGTGTAACTTGTTGTAACTCAACTAA 59.455 33.333 11.11 4.65 45.19 2.24
474 475 8.545420 CGTGTAACTTGTTGTAACTCAACTAAT 58.455 33.333 11.11 0.00 45.19 1.73
484 485 7.377766 TGTAACTCAACTAATGATTTCAGGC 57.622 36.000 0.00 0.00 37.44 4.85
485 486 5.904362 AACTCAACTAATGATTTCAGGCC 57.096 39.130 0.00 0.00 37.44 5.19
486 487 3.941483 ACTCAACTAATGATTTCAGGCCG 59.059 43.478 0.00 0.00 37.44 6.13
487 488 3.278574 TCAACTAATGATTTCAGGCCGG 58.721 45.455 0.00 0.00 31.50 6.13
488 489 3.016736 CAACTAATGATTTCAGGCCGGT 58.983 45.455 1.90 0.00 0.00 5.28
489 490 2.919228 ACTAATGATTTCAGGCCGGTC 58.081 47.619 0.00 0.00 0.00 4.79
490 491 2.505819 ACTAATGATTTCAGGCCGGTCT 59.494 45.455 0.35 0.35 0.00 3.85
491 492 2.044123 AATGATTTCAGGCCGGTCTC 57.956 50.000 5.00 0.00 0.00 3.36
492 493 0.179073 ATGATTTCAGGCCGGTCTCG 60.179 55.000 5.00 1.64 0.00 4.04
493 494 1.254975 TGATTTCAGGCCGGTCTCGA 61.255 55.000 5.00 4.60 39.00 4.04
494 495 0.528684 GATTTCAGGCCGGTCTCGAG 60.529 60.000 5.00 5.93 39.00 4.04
495 496 2.579684 ATTTCAGGCCGGTCTCGAGC 62.580 60.000 5.00 2.69 39.00 5.03
499 500 3.597728 GGCCGGTCTCGAGCCTAG 61.598 72.222 19.30 13.29 44.02 3.02
500 501 3.597728 GCCGGTCTCGAGCCTAGG 61.598 72.222 19.30 3.67 39.00 3.02
501 502 3.597728 CCGGTCTCGAGCCTAGGC 61.598 72.222 27.19 27.19 39.00 3.93
502 503 3.597728 CGGTCTCGAGCCTAGGCC 61.598 72.222 30.42 19.75 43.17 5.19
503 504 2.123640 GGTCTCGAGCCTAGGCCT 60.124 66.667 30.42 17.37 43.17 5.19
504 505 1.758906 GGTCTCGAGCCTAGGCCTT 60.759 63.158 30.42 13.32 43.17 4.35
505 506 1.331399 GGTCTCGAGCCTAGGCCTTT 61.331 60.000 30.42 12.46 43.17 3.11
506 507 0.179097 GTCTCGAGCCTAGGCCTTTG 60.179 60.000 30.42 16.54 43.17 2.77
507 508 1.144936 CTCGAGCCTAGGCCTTTGG 59.855 63.158 30.42 15.72 43.17 3.28
508 509 2.190578 CGAGCCTAGGCCTTTGGG 59.809 66.667 30.42 12.80 43.17 4.12
536 537 2.847441 GGAACGGCCCTTCTATAAAGG 58.153 52.381 13.31 0.00 37.17 3.11
546 547 4.392940 CCTTCTATAAAGGGCTGACATGG 58.607 47.826 0.00 0.00 33.79 3.66
547 548 4.392940 CTTCTATAAAGGGCTGACATGGG 58.607 47.826 0.00 0.00 0.00 4.00
548 549 2.106511 TCTATAAAGGGCTGACATGGGC 59.893 50.000 0.00 0.00 0.00 5.36
571 572 1.228367 CCCATATGGCCAGGTCTGC 60.228 63.158 16.97 0.00 0.00 4.26
572 573 1.713005 CCCATATGGCCAGGTCTGCT 61.713 60.000 16.97 0.00 0.00 4.24
573 574 0.250640 CCATATGGCCAGGTCTGCTC 60.251 60.000 13.05 0.00 0.00 4.26
574 575 0.250640 CATATGGCCAGGTCTGCTCC 60.251 60.000 13.05 0.00 0.00 4.70
575 576 0.695462 ATATGGCCAGGTCTGCTCCA 60.695 55.000 13.05 10.84 36.59 3.86
576 577 1.340399 TATGGCCAGGTCTGCTCCAG 61.340 60.000 13.05 0.00 35.98 3.86
577 578 3.005539 GGCCAGGTCTGCTCCAGA 61.006 66.667 0.00 0.00 38.25 3.86
584 585 4.521559 TCTGCTCCAGACCGAGTT 57.478 55.556 0.00 0.00 35.39 3.01
585 586 2.746697 TCTGCTCCAGACCGAGTTT 58.253 52.632 0.00 0.00 35.39 2.66
586 587 1.048601 TCTGCTCCAGACCGAGTTTT 58.951 50.000 0.00 0.00 35.39 2.43
587 588 1.416401 TCTGCTCCAGACCGAGTTTTT 59.584 47.619 0.00 0.00 35.39 1.94
588 589 1.801178 CTGCTCCAGACCGAGTTTTTC 59.199 52.381 0.00 0.00 32.44 2.29
589 590 1.416401 TGCTCCAGACCGAGTTTTTCT 59.584 47.619 0.00 0.00 32.11 2.52
590 591 2.158813 TGCTCCAGACCGAGTTTTTCTT 60.159 45.455 0.00 0.00 32.11 2.52
591 592 2.879026 GCTCCAGACCGAGTTTTTCTTT 59.121 45.455 0.00 0.00 32.11 2.52
592 593 3.315470 GCTCCAGACCGAGTTTTTCTTTT 59.685 43.478 0.00 0.00 32.11 2.27
593 594 4.202020 GCTCCAGACCGAGTTTTTCTTTTT 60.202 41.667 0.00 0.00 32.11 1.94
594 595 5.494632 TCCAGACCGAGTTTTTCTTTTTC 57.505 39.130 0.00 0.00 0.00 2.29
595 596 5.190677 TCCAGACCGAGTTTTTCTTTTTCT 58.809 37.500 0.00 0.00 0.00 2.52
596 597 5.650703 TCCAGACCGAGTTTTTCTTTTTCTT 59.349 36.000 0.00 0.00 0.00 2.52
597 598 6.152154 TCCAGACCGAGTTTTTCTTTTTCTTT 59.848 34.615 0.00 0.00 0.00 2.52
598 599 6.472486 CCAGACCGAGTTTTTCTTTTTCTTTC 59.528 38.462 0.00 0.00 0.00 2.62
599 600 7.027161 CAGACCGAGTTTTTCTTTTTCTTTCA 58.973 34.615 0.00 0.00 0.00 2.69
600 601 7.218963 CAGACCGAGTTTTTCTTTTTCTTTCAG 59.781 37.037 0.00 0.00 0.00 3.02
601 602 7.120726 AGACCGAGTTTTTCTTTTTCTTTCAGA 59.879 33.333 0.00 0.00 0.00 3.27
602 603 7.599171 ACCGAGTTTTTCTTTTTCTTTCAGAA 58.401 30.769 0.00 0.00 31.28 3.02
603 604 7.541091 ACCGAGTTTTTCTTTTTCTTTCAGAAC 59.459 33.333 0.00 0.00 33.26 3.01
604 605 7.009265 CCGAGTTTTTCTTTTTCTTTCAGAACC 59.991 37.037 0.00 0.00 33.26 3.62
605 606 7.540745 CGAGTTTTTCTTTTTCTTTCAGAACCA 59.459 33.333 0.00 0.00 33.26 3.67
606 607 9.203421 GAGTTTTTCTTTTTCTTTCAGAACCAA 57.797 29.630 0.00 0.00 33.26 3.67
607 608 9.208022 AGTTTTTCTTTTTCTTTCAGAACCAAG 57.792 29.630 0.00 0.00 33.26 3.61
608 609 7.595311 TTTTCTTTTTCTTTCAGAACCAAGC 57.405 32.000 0.00 0.00 33.26 4.01
609 610 4.920376 TCTTTTTCTTTCAGAACCAAGCG 58.080 39.130 0.00 0.00 33.26 4.68
610 611 3.708563 TTTTCTTTCAGAACCAAGCGG 57.291 42.857 0.00 0.00 33.26 5.52
611 612 1.604604 TTCTTTCAGAACCAAGCGGG 58.395 50.000 0.00 0.00 44.81 6.13
612 613 0.889186 TCTTTCAGAACCAAGCGGGC 60.889 55.000 0.00 0.00 42.05 6.13
613 614 0.890996 CTTTCAGAACCAAGCGGGCT 60.891 55.000 0.00 0.00 42.05 5.19
614 615 0.889186 TTTCAGAACCAAGCGGGCTC 60.889 55.000 0.00 0.00 42.05 4.70
615 616 1.768684 TTCAGAACCAAGCGGGCTCT 61.769 55.000 0.00 0.00 42.05 4.09
616 617 1.302832 CAGAACCAAGCGGGCTCTT 60.303 57.895 1.18 0.00 42.05 2.85
617 618 1.003233 AGAACCAAGCGGGCTCTTC 60.003 57.895 0.00 0.00 42.05 2.87
644 645 2.368221 TGGCAAAATTCCCCTTCACTTG 59.632 45.455 0.00 0.00 0.00 3.16
648 649 1.826385 AATTCCCCTTCACTTGCTCG 58.174 50.000 0.00 0.00 0.00 5.03
649 650 0.678048 ATTCCCCTTCACTTGCTCGC 60.678 55.000 0.00 0.00 0.00 5.03
727 736 4.514577 GCCGCTCGCTTCTGCCTA 62.515 66.667 0.00 0.00 35.36 3.93
743 752 2.164338 GCCTACTCTATTCCTCCCTCG 58.836 57.143 0.00 0.00 0.00 4.63
744 753 2.797786 CCTACTCTATTCCTCCCTCGG 58.202 57.143 0.00 0.00 0.00 4.63
746 755 3.181431 CCTACTCTATTCCTCCCTCGGAA 60.181 52.174 0.00 0.00 46.37 4.30
757 766 2.586792 CTCGGAAGGGGGCTCTTG 59.413 66.667 0.00 0.00 0.00 3.02
759 768 4.803908 CGGAAGGGGGCTCTTGGC 62.804 72.222 0.00 0.00 40.90 4.52
775 784 3.224324 GCCTCGCCGGTCATCCTA 61.224 66.667 1.90 0.00 34.25 2.94
788 797 1.134491 TCATCCTAGTCGAGCTCGTCA 60.134 52.381 33.33 18.97 40.80 4.35
797 806 1.867919 CGAGCTCGTCACCTTCCACT 61.868 60.000 27.79 0.00 34.11 4.00
877 886 2.278857 CTCCTCGTCGCCGGATTG 60.279 66.667 5.05 0.00 33.95 2.67
888 897 4.891727 CGGATTGCTAGGCGCCGT 62.892 66.667 23.20 12.38 36.28 5.68
936 945 2.863346 CGTGGACGGAGGGAACACA 61.863 63.158 0.00 0.00 35.37 3.72
952 961 1.423541 ACACAAGCCATCCACCTGTAA 59.576 47.619 0.00 0.00 0.00 2.41
969 979 2.221906 TAACTCGCGGCAGGTCTTCC 62.222 60.000 6.13 0.00 0.00 3.46
1299 1310 8.930760 CCCGCTCATATTTTGTTCAAATTTTTA 58.069 29.630 0.00 0.00 36.43 1.52
1300 1311 9.739786 CCGCTCATATTTTGTTCAAATTTTTAC 57.260 29.630 0.00 0.00 36.43 2.01
1439 1617 2.896039 TGACCCAAAATACAAAGGGGG 58.104 47.619 0.00 0.00 45.83 5.40
1573 1751 3.681034 CGCTCCAAGAAGAAGTGATGGAT 60.681 47.826 0.00 0.00 39.33 3.41
1606 1784 3.488363 ACTATACAGCTTACCGAGGGAG 58.512 50.000 0.00 0.00 0.00 4.30
1666 1844 6.604171 TCCTATACGTATTGGAACAGGTCTA 58.396 40.000 28.97 9.50 42.39 2.59
1679 1857 5.652891 GGAACAGGTCTATTCTACTCTGACA 59.347 44.000 0.00 0.00 0.00 3.58
1684 1862 7.563188 ACAGGTCTATTCTACTCTGACATTGAT 59.437 37.037 0.00 0.00 0.00 2.57
1790 1968 3.911964 GCACAAACTGCTAATTAACACCG 59.088 43.478 0.00 0.00 43.33 4.94
1881 2059 0.891373 GCTGTGGAGTACTCTGCTCA 59.109 55.000 21.88 12.05 35.11 4.26
1908 2086 3.755434 GCTGTTGCTGGAGCTTGT 58.245 55.556 0.00 0.00 42.66 3.16
1921 2099 1.004440 GCTTGTGAAGGCGGTCTCT 60.004 57.895 0.00 0.00 0.00 3.10
1927 2105 0.251386 TGAAGGCGGTCTCTGAGAGT 60.251 55.000 7.80 0.00 0.00 3.24
1947 2125 3.948719 GGGACTTGACCGTGGCCA 61.949 66.667 0.00 0.00 0.00 5.36
2162 2340 3.307691 CCTTCCAGGCTCACTGTTCATTA 60.308 47.826 0.00 0.00 46.06 1.90
2292 2471 4.929819 ACACACGCATGTCCTATGTATA 57.070 40.909 0.00 0.00 36.72 1.47
2535 2714 2.034124 ACAAAAGCAGCACTGGACATT 58.966 42.857 0.00 0.00 0.00 2.71
2667 2846 6.202570 GTCTTAGAGAATCAGTGCATTCCATC 59.797 42.308 0.00 4.97 37.82 3.51
2803 6367 2.548707 GGAATGCTCGCATGGTCAGATA 60.549 50.000 4.99 0.00 36.68 1.98
2883 6447 8.978472 GGGCAGTGGACAATAATCTACTATATA 58.022 37.037 0.00 0.00 38.27 0.86
2923 6487 7.657761 CGGAGCTTTAGGAATATTATTCACTGT 59.342 37.037 16.27 3.02 0.00 3.55
3034 6608 7.668886 AGATTGAACCATGAAGATTTCTGAACT 59.331 33.333 0.00 0.00 0.00 3.01
3071 6645 4.083802 AGCAAGAGTTGTTTCTTATGTCGC 60.084 41.667 0.00 0.00 35.70 5.19
3079 6653 4.911053 TGTTTCTTATGTCGCGTTTTTGT 58.089 34.783 5.77 0.00 0.00 2.83
3125 6700 0.319405 GCTCATTGGCTGCCTTTGTT 59.681 50.000 21.03 0.00 0.00 2.83
3145 6720 1.140312 TGGGTCAGCTTGAAAGAGGT 58.860 50.000 0.00 0.00 0.00 3.85
3242 6956 3.317993 AGAATTGTTCACTCGGGTTTTGG 59.682 43.478 0.00 0.00 0.00 3.28
3267 6981 0.976073 TGTGCTGGACCCTAGGTAGC 60.976 60.000 8.29 12.06 37.68 3.58
3271 6985 1.490910 GCTGGACCCTAGGTAGCATTT 59.509 52.381 8.29 0.00 37.28 2.32
3273 6987 1.843851 TGGACCCTAGGTAGCATTTGG 59.156 52.381 8.29 0.00 35.25 3.28
3295 7009 3.434940 ACAAGTTGGTATTGAGGACCC 57.565 47.619 7.96 0.00 35.99 4.46
3302 7016 5.072329 AGTTGGTATTGAGGACCCATGATAG 59.928 44.000 0.00 0.00 35.99 2.08
3309 7023 5.255397 TGAGGACCCATGATAGTTTTGTT 57.745 39.130 0.00 0.00 0.00 2.83
3351 7067 3.561503 CTGTGAACATTGTGCATGACAG 58.438 45.455 0.00 0.32 35.44 3.51
3366 7082 5.009811 TGCATGACAGATTGACAATTGACAA 59.990 36.000 22.24 22.24 34.59 3.18
3388 7104 8.279970 ACAATTAAGTGTGCTGCTCATAATTA 57.720 30.769 7.92 10.62 29.23 1.40
3413 7129 2.334977 TGAGTCTAAGCAAGGGTTGGA 58.665 47.619 0.00 0.00 0.00 3.53
3420 7136 0.179018 AGCAAGGGTTGGACACTCAC 60.179 55.000 0.00 0.00 24.25 3.51
3425 7141 3.382083 AGGGTTGGACACTCACTTTTT 57.618 42.857 0.00 0.00 0.00 1.94
3426 7142 3.023832 AGGGTTGGACACTCACTTTTTG 58.976 45.455 0.00 0.00 0.00 2.44
3433 7149 0.675633 CACTCACTTTTTGCCCCTGG 59.324 55.000 0.00 0.00 0.00 4.45
3490 7368 6.403866 AAACAGCACCTGAAATTGTTATCA 57.596 33.333 0.00 0.00 35.18 2.15
3508 7386 8.463930 TGTTATCAGAAAACAAAAGACTGGAT 57.536 30.769 0.00 0.00 34.04 3.41
3545 7423 5.605564 TGATTTCGTTTGGTCTGTACATG 57.394 39.130 0.00 0.00 0.00 3.21
3546 7424 5.060506 TGATTTCGTTTGGTCTGTACATGT 58.939 37.500 2.69 2.69 0.00 3.21
3570 7448 9.968870 TGTATGGGTAAATAAAACAACTCAAAC 57.031 29.630 0.00 0.00 0.00 2.93
3571 7449 9.414295 GTATGGGTAAATAAAACAACTCAAACC 57.586 33.333 0.00 0.00 0.00 3.27
3600 7478 5.128663 TCAACATACTTAGCACCTCAGCATA 59.871 40.000 0.00 0.00 36.85 3.14
3612 7490 5.121811 CACCTCAGCATATCTAAAGCAGTT 58.878 41.667 0.00 0.00 0.00 3.16
3614 7492 4.024218 CCTCAGCATATCTAAAGCAGTTGC 60.024 45.833 0.00 0.00 42.49 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 7.681939 ATTATGCCTCTCGTGAAAGTAAAAA 57.318 32.000 0.00 0.00 0.00 1.94
32 33 7.681939 AATTATGCCTCTCGTGAAAGTAAAA 57.318 32.000 0.00 0.00 0.00 1.52
33 34 7.526608 CAAATTATGCCTCTCGTGAAAGTAAA 58.473 34.615 0.00 0.00 0.00 2.01
34 35 7.072177 CAAATTATGCCTCTCGTGAAAGTAA 57.928 36.000 0.00 0.00 0.00 2.24
35 36 6.662414 CAAATTATGCCTCTCGTGAAAGTA 57.338 37.500 0.00 0.00 0.00 2.24
36 37 5.551760 CAAATTATGCCTCTCGTGAAAGT 57.448 39.130 0.00 0.00 0.00 2.66
49 50 8.408178 ATGCCTCTCATGGAAGCAAATTATGC 62.408 42.308 10.31 4.93 43.54 3.14
50 51 4.340097 TGCCTCTCATGGAAGCAAATTATG 59.660 41.667 5.35 0.00 38.32 1.90
51 52 4.539726 TGCCTCTCATGGAAGCAAATTAT 58.460 39.130 5.35 0.00 38.32 1.28
52 53 3.966979 TGCCTCTCATGGAAGCAAATTA 58.033 40.909 5.35 0.00 38.32 1.40
53 54 2.811410 TGCCTCTCATGGAAGCAAATT 58.189 42.857 5.35 0.00 38.32 1.82
54 55 2.519771 TGCCTCTCATGGAAGCAAAT 57.480 45.000 5.35 0.00 38.32 2.32
55 56 2.097036 CATGCCTCTCATGGAAGCAAA 58.903 47.619 10.31 0.00 46.81 3.68
56 57 1.758936 CATGCCTCTCATGGAAGCAA 58.241 50.000 10.31 0.00 46.81 3.91
57 58 3.489391 CATGCCTCTCATGGAAGCA 57.511 52.632 9.11 9.11 46.81 3.91
64 65 4.273318 GGAAGTAAAACCATGCCTCTCAT 58.727 43.478 0.00 0.00 35.31 2.90
65 66 3.686016 GGAAGTAAAACCATGCCTCTCA 58.314 45.455 0.00 0.00 0.00 3.27
66 67 2.678336 CGGAAGTAAAACCATGCCTCTC 59.322 50.000 0.00 0.00 0.00 3.20
67 68 2.618045 CCGGAAGTAAAACCATGCCTCT 60.618 50.000 0.00 0.00 0.00 3.69
68 69 1.743394 CCGGAAGTAAAACCATGCCTC 59.257 52.381 0.00 0.00 0.00 4.70
69 70 1.834188 CCGGAAGTAAAACCATGCCT 58.166 50.000 0.00 0.00 0.00 4.75
70 71 0.172578 GCCGGAAGTAAAACCATGCC 59.827 55.000 5.05 0.00 0.00 4.40
71 72 0.179174 CGCCGGAAGTAAAACCATGC 60.179 55.000 5.05 0.00 0.00 4.06
72 73 1.396996 CTCGCCGGAAGTAAAACCATG 59.603 52.381 5.05 0.00 0.00 3.66
73 74 1.276989 TCTCGCCGGAAGTAAAACCAT 59.723 47.619 5.05 0.00 0.00 3.55
74 75 0.680618 TCTCGCCGGAAGTAAAACCA 59.319 50.000 5.05 0.00 0.00 3.67
75 76 1.356938 CTCTCGCCGGAAGTAAAACC 58.643 55.000 5.05 0.00 0.00 3.27
76 77 1.337541 ACCTCTCGCCGGAAGTAAAAC 60.338 52.381 5.05 0.00 0.00 2.43
77 78 0.971386 ACCTCTCGCCGGAAGTAAAA 59.029 50.000 5.05 0.00 0.00 1.52
78 79 0.245539 CACCTCTCGCCGGAAGTAAA 59.754 55.000 5.05 0.00 0.00 2.01
79 80 1.888018 CACCTCTCGCCGGAAGTAA 59.112 57.895 5.05 0.00 0.00 2.24
80 81 2.707849 GCACCTCTCGCCGGAAGTA 61.708 63.158 5.05 0.00 0.00 2.24
81 82 4.070552 GCACCTCTCGCCGGAAGT 62.071 66.667 5.05 0.00 0.00 3.01
89 90 4.477975 GGACGACCGCACCTCTCG 62.478 72.222 0.00 0.00 0.00 4.04
90 91 4.131088 GGGACGACCGCACCTCTC 62.131 72.222 0.00 0.00 36.97 3.20
91 92 4.680537 AGGGACGACCGCACCTCT 62.681 66.667 0.00 0.00 46.96 3.69
92 93 4.131088 GAGGGACGACCGCACCTC 62.131 72.222 14.23 14.23 46.96 3.85
93 94 4.680537 AGAGGGACGACCGCACCT 62.681 66.667 5.39 5.39 46.96 4.00
94 95 4.131088 GAGAGGGACGACCGCACC 62.131 72.222 0.00 0.00 46.96 5.01
95 96 2.430382 TTTGAGAGGGACGACCGCAC 62.430 60.000 0.00 0.00 46.96 5.34
96 97 1.750341 TTTTGAGAGGGACGACCGCA 61.750 55.000 0.00 0.00 46.96 5.69
97 98 0.601841 TTTTTGAGAGGGACGACCGC 60.602 55.000 0.00 0.00 46.96 5.68
98 99 1.145803 GTTTTTGAGAGGGACGACCG 58.854 55.000 0.00 0.00 46.96 4.79
99 100 1.145803 CGTTTTTGAGAGGGACGACC 58.854 55.000 0.00 0.00 35.90 4.79
100 101 2.144482 TCGTTTTTGAGAGGGACGAC 57.856 50.000 0.00 0.00 37.76 4.34
101 102 2.894763 TTCGTTTTTGAGAGGGACGA 57.105 45.000 0.00 0.00 40.50 4.20
102 103 3.955771 TTTTCGTTTTTGAGAGGGACG 57.044 42.857 0.00 0.00 35.24 4.79
134 135 4.278170 ACCGTGCATCTCATGAAAGAAAAA 59.722 37.500 0.00 0.00 33.49 1.94
135 136 3.820467 ACCGTGCATCTCATGAAAGAAAA 59.180 39.130 0.00 0.00 33.49 2.29
136 137 3.411446 ACCGTGCATCTCATGAAAGAAA 58.589 40.909 0.00 0.00 33.49 2.52
137 138 3.057969 ACCGTGCATCTCATGAAAGAA 57.942 42.857 0.00 0.00 33.49 2.52
138 139 2.768253 ACCGTGCATCTCATGAAAGA 57.232 45.000 0.00 0.00 33.49 2.52
139 140 3.837213 AAACCGTGCATCTCATGAAAG 57.163 42.857 0.00 0.00 33.49 2.62
140 141 3.856638 GCAAAACCGTGCATCTCATGAAA 60.857 43.478 0.00 0.00 44.29 2.69
141 142 2.351641 GCAAAACCGTGCATCTCATGAA 60.352 45.455 0.00 0.00 44.29 2.57
142 143 1.199789 GCAAAACCGTGCATCTCATGA 59.800 47.619 0.00 0.00 44.29 3.07
143 144 1.621107 GCAAAACCGTGCATCTCATG 58.379 50.000 0.00 0.00 44.29 3.07
167 168 3.016474 GCAAAGTCGTGCCTCTCGC 62.016 63.158 0.00 0.00 38.66 5.03
168 169 0.946221 AAGCAAAGTCGTGCCTCTCG 60.946 55.000 0.00 0.00 46.14 4.04
169 170 0.793250 GAAGCAAAGTCGTGCCTCTC 59.207 55.000 0.00 0.00 46.14 3.20
170 171 0.603975 GGAAGCAAAGTCGTGCCTCT 60.604 55.000 0.00 0.00 46.14 3.69
171 172 1.869690 GGAAGCAAAGTCGTGCCTC 59.130 57.895 0.00 0.00 46.14 4.70
172 173 1.961277 CGGAAGCAAAGTCGTGCCT 60.961 57.895 0.00 0.00 46.14 4.75
173 174 2.251642 ACGGAAGCAAAGTCGTGCC 61.252 57.895 0.00 0.00 46.14 5.01
174 175 1.082756 CACGGAAGCAAAGTCGTGC 60.083 57.895 0.00 0.00 44.56 5.34
176 177 0.387929 TCTCACGGAAGCAAAGTCGT 59.612 50.000 0.00 0.00 36.19 4.34
177 178 1.063806 CTCTCACGGAAGCAAAGTCG 58.936 55.000 0.00 0.00 0.00 4.18
178 179 1.433534 CCTCTCACGGAAGCAAAGTC 58.566 55.000 0.00 0.00 0.00 3.01
179 180 0.603975 GCCTCTCACGGAAGCAAAGT 60.604 55.000 0.00 0.00 32.03 2.66
180 181 0.603707 TGCCTCTCACGGAAGCAAAG 60.604 55.000 0.00 0.00 38.32 2.77
181 182 0.036732 ATGCCTCTCACGGAAGCAAA 59.963 50.000 0.00 0.00 43.54 3.68
182 183 0.674581 CATGCCTCTCACGGAAGCAA 60.675 55.000 0.00 0.00 43.54 3.91
183 184 1.078918 CATGCCTCTCACGGAAGCA 60.079 57.895 0.00 0.00 44.30 3.91
184 185 1.817099 CCATGCCTCTCACGGAAGC 60.817 63.158 0.00 0.00 26.83 3.86
185 186 0.467384 ATCCATGCCTCTCACGGAAG 59.533 55.000 0.00 0.00 40.86 3.46
186 187 0.178767 CATCCATGCCTCTCACGGAA 59.821 55.000 0.00 0.00 40.86 4.30
187 188 0.977627 ACATCCATGCCTCTCACGGA 60.978 55.000 0.00 0.00 41.83 4.69
188 189 0.812811 CACATCCATGCCTCTCACGG 60.813 60.000 0.00 0.00 0.00 4.94
189 190 1.434622 GCACATCCATGCCTCTCACG 61.435 60.000 0.00 0.00 39.86 4.35
190 191 0.393402 TGCACATCCATGCCTCTCAC 60.393 55.000 0.00 0.00 45.50 3.51
191 192 0.549469 ATGCACATCCATGCCTCTCA 59.451 50.000 0.00 0.00 45.50 3.27
192 193 1.202782 AGATGCACATCCATGCCTCTC 60.203 52.381 7.01 0.00 44.33 3.20
193 194 0.844660 AGATGCACATCCATGCCTCT 59.155 50.000 7.01 0.40 45.50 3.69
194 195 1.236628 GAGATGCACATCCATGCCTC 58.763 55.000 7.01 0.00 45.50 4.70
195 196 0.534427 CGAGATGCACATCCATGCCT 60.534 55.000 7.01 0.00 45.50 4.75
196 197 0.533531 TCGAGATGCACATCCATGCC 60.534 55.000 7.01 0.00 45.50 4.40
197 198 1.302366 TTCGAGATGCACATCCATGC 58.698 50.000 7.01 0.00 46.32 4.06
198 199 3.242969 CCTTTTCGAGATGCACATCCATG 60.243 47.826 7.01 0.00 38.58 3.66
199 200 2.947652 CCTTTTCGAGATGCACATCCAT 59.052 45.455 7.01 0.00 38.58 3.41
200 201 2.358957 CCTTTTCGAGATGCACATCCA 58.641 47.619 7.01 0.00 38.58 3.41
201 202 1.672881 CCCTTTTCGAGATGCACATCC 59.327 52.381 7.01 0.00 38.58 3.51
202 203 2.632377 TCCCTTTTCGAGATGCACATC 58.368 47.619 2.28 2.28 38.09 3.06
203 204 2.787473 TCCCTTTTCGAGATGCACAT 57.213 45.000 0.00 0.00 0.00 3.21
204 205 2.559698 TTCCCTTTTCGAGATGCACA 57.440 45.000 0.00 0.00 0.00 4.57
205 206 3.915437 TTTTCCCTTTTCGAGATGCAC 57.085 42.857 0.00 0.00 0.00 4.57
231 232 9.796120 TCTCGCGGAATGAAAAATAAATAAAAT 57.204 25.926 6.13 0.00 0.00 1.82
232 233 9.284594 CTCTCGCGGAATGAAAAATAAATAAAA 57.715 29.630 6.13 0.00 0.00 1.52
233 234 7.431084 GCTCTCGCGGAATGAAAAATAAATAAA 59.569 33.333 6.13 0.00 0.00 1.40
234 235 6.910433 GCTCTCGCGGAATGAAAAATAAATAA 59.090 34.615 6.13 0.00 0.00 1.40
235 236 6.427150 GCTCTCGCGGAATGAAAAATAAATA 58.573 36.000 6.13 0.00 0.00 1.40
236 237 5.273944 GCTCTCGCGGAATGAAAAATAAAT 58.726 37.500 6.13 0.00 0.00 1.40
237 238 4.438200 GGCTCTCGCGGAATGAAAAATAAA 60.438 41.667 6.13 0.00 36.88 1.40
238 239 3.064820 GGCTCTCGCGGAATGAAAAATAA 59.935 43.478 6.13 0.00 36.88 1.40
239 240 2.612212 GGCTCTCGCGGAATGAAAAATA 59.388 45.455 6.13 0.00 36.88 1.40
240 241 1.401905 GGCTCTCGCGGAATGAAAAAT 59.598 47.619 6.13 0.00 36.88 1.82
241 242 0.802494 GGCTCTCGCGGAATGAAAAA 59.198 50.000 6.13 0.00 36.88 1.94
242 243 0.036388 AGGCTCTCGCGGAATGAAAA 60.036 50.000 6.13 0.00 36.88 2.29
243 244 0.821517 TAGGCTCTCGCGGAATGAAA 59.178 50.000 6.13 0.00 36.88 2.69
244 245 0.821517 TTAGGCTCTCGCGGAATGAA 59.178 50.000 6.13 0.00 36.88 2.57
245 246 1.040646 ATTAGGCTCTCGCGGAATGA 58.959 50.000 6.13 0.00 36.88 2.57
246 247 1.871080 AATTAGGCTCTCGCGGAATG 58.129 50.000 6.13 0.00 36.88 2.67
247 248 2.622064 AAATTAGGCTCTCGCGGAAT 57.378 45.000 6.13 0.00 36.88 3.01
248 249 2.396590 AAAATTAGGCTCTCGCGGAA 57.603 45.000 6.13 0.00 36.88 4.30
249 250 2.396590 AAAAATTAGGCTCTCGCGGA 57.603 45.000 6.13 1.01 36.88 5.54
275 276 3.572604 TGGGTTTTGACGAACGTTTTT 57.427 38.095 0.46 0.00 0.00 1.94
276 277 3.786516 ATGGGTTTTGACGAACGTTTT 57.213 38.095 0.46 0.00 0.00 2.43
277 278 3.786516 AATGGGTTTTGACGAACGTTT 57.213 38.095 0.46 0.00 0.00 3.60
278 279 4.600032 GTTAATGGGTTTTGACGAACGTT 58.400 39.130 0.00 0.00 0.00 3.99
279 280 3.303263 CGTTAATGGGTTTTGACGAACGT 60.303 43.478 0.00 0.00 35.08 3.99
280 281 3.219981 CGTTAATGGGTTTTGACGAACG 58.780 45.455 0.00 0.00 31.28 3.95
281 282 3.969981 CACGTTAATGGGTTTTGACGAAC 59.030 43.478 8.22 0.00 32.93 3.95
282 283 3.003482 CCACGTTAATGGGTTTTGACGAA 59.997 43.478 8.22 0.00 35.95 3.85
283 284 2.548904 CCACGTTAATGGGTTTTGACGA 59.451 45.455 8.22 0.00 35.95 4.20
284 285 2.923643 CCACGTTAATGGGTTTTGACG 58.076 47.619 0.00 0.78 35.95 4.35
293 294 4.998672 TCAAAACTAGACCCACGTTAATGG 59.001 41.667 0.00 0.00 39.71 3.16
294 295 6.425721 TCTTCAAAACTAGACCCACGTTAATG 59.574 38.462 0.00 0.00 0.00 1.90
295 296 6.527423 TCTTCAAAACTAGACCCACGTTAAT 58.473 36.000 0.00 0.00 0.00 1.40
296 297 5.916318 TCTTCAAAACTAGACCCACGTTAA 58.084 37.500 0.00 0.00 0.00 2.01
297 298 5.534207 TCTTCAAAACTAGACCCACGTTA 57.466 39.130 0.00 0.00 0.00 3.18
298 299 4.411256 TCTTCAAAACTAGACCCACGTT 57.589 40.909 0.00 0.00 0.00 3.99
299 300 4.283722 AGATCTTCAAAACTAGACCCACGT 59.716 41.667 0.00 0.00 0.00 4.49
300 301 4.822026 AGATCTTCAAAACTAGACCCACG 58.178 43.478 0.00 0.00 0.00 4.94
301 302 6.147985 GTCAAGATCTTCAAAACTAGACCCAC 59.852 42.308 4.57 0.00 0.00 4.61
302 303 6.231211 GTCAAGATCTTCAAAACTAGACCCA 58.769 40.000 4.57 0.00 0.00 4.51
303 304 5.348997 CGTCAAGATCTTCAAAACTAGACCC 59.651 44.000 4.57 0.00 0.00 4.46
304 305 5.163943 GCGTCAAGATCTTCAAAACTAGACC 60.164 44.000 4.57 0.00 0.00 3.85
305 306 5.443431 CGCGTCAAGATCTTCAAAACTAGAC 60.443 44.000 4.57 6.61 0.00 2.59
306 307 4.621460 CGCGTCAAGATCTTCAAAACTAGA 59.379 41.667 4.57 0.00 0.00 2.43
307 308 4.621460 TCGCGTCAAGATCTTCAAAACTAG 59.379 41.667 4.57 0.00 0.00 2.57
308 309 4.552355 TCGCGTCAAGATCTTCAAAACTA 58.448 39.130 4.57 0.00 0.00 2.24
309 310 3.390135 TCGCGTCAAGATCTTCAAAACT 58.610 40.909 4.57 0.00 0.00 2.66
310 311 3.428870 TCTCGCGTCAAGATCTTCAAAAC 59.571 43.478 4.57 1.23 0.00 2.43
311 312 3.649073 TCTCGCGTCAAGATCTTCAAAA 58.351 40.909 4.57 0.00 0.00 2.44
312 313 3.297830 TCTCGCGTCAAGATCTTCAAA 57.702 42.857 4.57 0.00 0.00 2.69
313 314 3.297830 TTCTCGCGTCAAGATCTTCAA 57.702 42.857 4.57 0.00 0.00 2.69
314 315 3.297830 TTTCTCGCGTCAAGATCTTCA 57.702 42.857 4.57 0.00 0.00 3.02
315 316 3.244111 GGATTTCTCGCGTCAAGATCTTC 59.756 47.826 4.57 0.00 0.00 2.87
316 317 3.190874 GGATTTCTCGCGTCAAGATCTT 58.809 45.455 5.77 0.88 0.00 2.40
317 318 2.166459 TGGATTTCTCGCGTCAAGATCT 59.834 45.455 5.77 0.00 0.00 2.75
318 319 2.540515 TGGATTTCTCGCGTCAAGATC 58.459 47.619 5.77 4.95 0.00 2.75
319 320 2.672961 TGGATTTCTCGCGTCAAGAT 57.327 45.000 5.77 0.00 0.00 2.40
320 321 2.066262 GTTGGATTTCTCGCGTCAAGA 58.934 47.619 5.77 0.00 0.00 3.02
321 322 1.201812 CGTTGGATTTCTCGCGTCAAG 60.202 52.381 5.77 0.00 0.00 3.02
322 323 0.787787 CGTTGGATTTCTCGCGTCAA 59.212 50.000 5.77 0.00 0.00 3.18
323 324 0.038983 TCGTTGGATTTCTCGCGTCA 60.039 50.000 5.77 0.00 0.00 4.35
324 325 1.005975 CATCGTTGGATTTCTCGCGTC 60.006 52.381 5.77 0.00 0.00 5.19
325 326 0.999406 CATCGTTGGATTTCTCGCGT 59.001 50.000 5.77 0.00 0.00 6.01
326 327 0.301687 CCATCGTTGGATTTCTCGCG 59.698 55.000 6.68 0.00 46.92 5.87
336 337 5.565592 TCAAATCTCAAATCCATCGTTGG 57.434 39.130 6.15 6.15 45.15 3.77
337 338 5.509272 CGTTCAAATCTCAAATCCATCGTTG 59.491 40.000 0.00 0.00 0.00 4.10
338 339 5.631026 CGTTCAAATCTCAAATCCATCGTT 58.369 37.500 0.00 0.00 0.00 3.85
339 340 4.437390 GCGTTCAAATCTCAAATCCATCGT 60.437 41.667 0.00 0.00 0.00 3.73
340 341 4.031028 GCGTTCAAATCTCAAATCCATCG 58.969 43.478 0.00 0.00 0.00 3.84
341 342 4.985413 TGCGTTCAAATCTCAAATCCATC 58.015 39.130 0.00 0.00 0.00 3.51
342 343 5.345702 CATGCGTTCAAATCTCAAATCCAT 58.654 37.500 0.00 0.00 0.00 3.41
343 344 4.380761 CCATGCGTTCAAATCTCAAATCCA 60.381 41.667 0.00 0.00 0.00 3.41
344 345 4.107622 CCATGCGTTCAAATCTCAAATCC 58.892 43.478 0.00 0.00 0.00 3.01
345 346 4.737054 ACCATGCGTTCAAATCTCAAATC 58.263 39.130 0.00 0.00 0.00 2.17
346 347 4.789012 ACCATGCGTTCAAATCTCAAAT 57.211 36.364 0.00 0.00 0.00 2.32
347 348 4.582701 AACCATGCGTTCAAATCTCAAA 57.417 36.364 0.00 0.00 0.00 2.69
348 349 4.582701 AAACCATGCGTTCAAATCTCAA 57.417 36.364 0.83 0.00 31.78 3.02
349 350 5.471797 TCTTAAACCATGCGTTCAAATCTCA 59.528 36.000 0.83 0.00 31.78 3.27
350 351 5.938322 TCTTAAACCATGCGTTCAAATCTC 58.062 37.500 0.83 0.00 31.78 2.75
351 352 5.705441 TCTCTTAAACCATGCGTTCAAATCT 59.295 36.000 0.83 0.00 31.78 2.40
352 353 5.938322 TCTCTTAAACCATGCGTTCAAATC 58.062 37.500 0.83 0.00 31.78 2.17
353 354 5.957842 TCTCTTAAACCATGCGTTCAAAT 57.042 34.783 0.83 0.00 31.78 2.32
354 355 5.957842 ATCTCTTAAACCATGCGTTCAAA 57.042 34.783 0.83 0.00 31.78 2.69
355 356 7.441890 TTTATCTCTTAAACCATGCGTTCAA 57.558 32.000 0.83 0.00 31.78 2.69
356 357 7.441890 TTTTATCTCTTAAACCATGCGTTCA 57.558 32.000 0.83 0.00 31.78 3.18
357 358 7.968405 ACATTTTATCTCTTAAACCATGCGTTC 59.032 33.333 0.83 0.00 31.78 3.95
358 359 7.826690 ACATTTTATCTCTTAAACCATGCGTT 58.173 30.769 0.00 0.00 35.70 4.84
359 360 7.391148 ACATTTTATCTCTTAAACCATGCGT 57.609 32.000 0.00 0.00 29.47 5.24
360 361 8.687824 AAACATTTTATCTCTTAAACCATGCG 57.312 30.769 0.00 0.00 29.47 4.73
411 412 6.430451 CACTTGTCGCAATCTAGAAGTTTTT 58.570 36.000 0.00 0.00 0.00 1.94
412 413 5.049405 CCACTTGTCGCAATCTAGAAGTTTT 60.049 40.000 0.00 0.00 0.00 2.43
413 414 4.452455 CCACTTGTCGCAATCTAGAAGTTT 59.548 41.667 0.00 0.00 0.00 2.66
414 415 3.997021 CCACTTGTCGCAATCTAGAAGTT 59.003 43.478 0.00 0.00 0.00 2.66
415 416 3.006967 ACCACTTGTCGCAATCTAGAAGT 59.993 43.478 0.00 0.00 0.00 3.01
416 417 3.369147 CACCACTTGTCGCAATCTAGAAG 59.631 47.826 0.00 0.00 0.00 2.85
417 418 3.325870 CACCACTTGTCGCAATCTAGAA 58.674 45.455 0.00 0.00 0.00 2.10
418 419 2.930887 GCACCACTTGTCGCAATCTAGA 60.931 50.000 0.00 0.00 0.00 2.43
419 420 1.394917 GCACCACTTGTCGCAATCTAG 59.605 52.381 0.00 0.00 0.00 2.43
420 421 1.270571 TGCACCACTTGTCGCAATCTA 60.271 47.619 0.00 0.00 31.18 1.98
421 422 0.534877 TGCACCACTTGTCGCAATCT 60.535 50.000 0.00 0.00 31.18 2.40
422 423 0.523072 ATGCACCACTTGTCGCAATC 59.477 50.000 0.00 0.00 35.59 2.67
423 424 1.819928 TATGCACCACTTGTCGCAAT 58.180 45.000 0.00 0.00 35.59 3.56
424 425 1.468127 CATATGCACCACTTGTCGCAA 59.532 47.619 0.00 0.00 35.59 4.85
425 426 1.085893 CATATGCACCACTTGTCGCA 58.914 50.000 0.00 0.00 36.12 5.10
426 427 0.248215 GCATATGCACCACTTGTCGC 60.248 55.000 22.84 0.00 41.59 5.19
427 428 3.903876 GCATATGCACCACTTGTCG 57.096 52.632 22.84 0.00 41.59 4.35
438 439 4.078363 ACAAGTTACACGTTGCATATGC 57.922 40.909 21.09 21.09 42.50 3.14
439 440 5.448438 ACAACAAGTTACACGTTGCATATG 58.552 37.500 14.08 0.00 42.98 1.78
440 441 5.682943 ACAACAAGTTACACGTTGCATAT 57.317 34.783 14.08 0.00 42.98 1.78
441 442 6.258287 AGTTACAACAAGTTACACGTTGCATA 59.742 34.615 14.08 1.77 42.98 3.14
442 443 5.065474 AGTTACAACAAGTTACACGTTGCAT 59.935 36.000 14.08 2.52 42.98 3.96
443 444 4.392445 AGTTACAACAAGTTACACGTTGCA 59.608 37.500 14.08 2.34 42.98 4.08
444 445 4.900664 AGTTACAACAAGTTACACGTTGC 58.099 39.130 14.08 2.45 42.98 4.17
445 446 6.097156 TGAGTTACAACAAGTTACACGTTG 57.903 37.500 13.02 13.02 44.38 4.10
446 447 6.724694 TTGAGTTACAACAAGTTACACGTT 57.275 33.333 0.00 0.00 32.34 3.99
459 460 7.094377 GGCCTGAAATCATTAGTTGAGTTACAA 60.094 37.037 0.00 0.00 42.39 2.41
460 461 6.374333 GGCCTGAAATCATTAGTTGAGTTACA 59.626 38.462 0.00 0.00 42.39 2.41
461 462 6.456988 CGGCCTGAAATCATTAGTTGAGTTAC 60.457 42.308 0.00 0.00 42.39 2.50
462 463 5.584649 CGGCCTGAAATCATTAGTTGAGTTA 59.415 40.000 0.00 0.00 42.39 2.24
463 464 4.396166 CGGCCTGAAATCATTAGTTGAGTT 59.604 41.667 0.00 0.00 44.84 3.01
464 465 3.941483 CGGCCTGAAATCATTAGTTGAGT 59.059 43.478 0.00 0.00 37.89 3.41
465 466 3.313526 CCGGCCTGAAATCATTAGTTGAG 59.686 47.826 0.00 0.00 37.89 3.02
466 467 3.278574 CCGGCCTGAAATCATTAGTTGA 58.721 45.455 0.00 0.00 39.12 3.18
467 468 3.016736 ACCGGCCTGAAATCATTAGTTG 58.983 45.455 0.00 0.00 0.00 3.16
468 469 3.054361 AGACCGGCCTGAAATCATTAGTT 60.054 43.478 0.00 0.00 0.00 2.24
469 470 2.505819 AGACCGGCCTGAAATCATTAGT 59.494 45.455 0.00 0.00 0.00 2.24
470 471 3.134458 GAGACCGGCCTGAAATCATTAG 58.866 50.000 0.00 0.00 0.00 1.73
471 472 2.483013 CGAGACCGGCCTGAAATCATTA 60.483 50.000 0.00 0.00 0.00 1.90
472 473 1.743772 CGAGACCGGCCTGAAATCATT 60.744 52.381 0.00 0.00 0.00 2.57
473 474 0.179073 CGAGACCGGCCTGAAATCAT 60.179 55.000 0.00 0.00 0.00 2.45
474 475 1.218047 CGAGACCGGCCTGAAATCA 59.782 57.895 0.00 0.00 0.00 2.57
475 476 0.528684 CTCGAGACCGGCCTGAAATC 60.529 60.000 6.58 0.00 36.24 2.17
476 477 1.517832 CTCGAGACCGGCCTGAAAT 59.482 57.895 6.58 0.00 36.24 2.17
477 478 2.970639 CTCGAGACCGGCCTGAAA 59.029 61.111 6.58 0.00 36.24 2.69
478 479 3.760035 GCTCGAGACCGGCCTGAA 61.760 66.667 18.75 0.00 36.24 3.02
482 483 3.597728 CTAGGCTCGAGACCGGCC 61.598 72.222 16.58 9.91 45.88 6.13
483 484 3.597728 CCTAGGCTCGAGACCGGC 61.598 72.222 16.58 0.26 36.24 6.13
484 485 3.597728 GCCTAGGCTCGAGACCGG 61.598 72.222 27.17 17.24 38.26 5.28
485 486 3.597728 GGCCTAGGCTCGAGACCG 61.598 72.222 32.18 6.41 41.60 4.79
486 487 1.331399 AAAGGCCTAGGCTCGAGACC 61.331 60.000 32.18 15.94 37.50 3.85
487 488 0.179097 CAAAGGCCTAGGCTCGAGAC 60.179 60.000 32.18 15.26 37.50 3.36
488 489 1.330655 CCAAAGGCCTAGGCTCGAGA 61.331 60.000 32.18 0.00 37.50 4.04
489 490 1.144936 CCAAAGGCCTAGGCTCGAG 59.855 63.158 32.18 19.28 37.50 4.04
490 491 2.367202 CCCAAAGGCCTAGGCTCGA 61.367 63.158 32.18 0.00 37.50 4.04
491 492 2.190578 CCCAAAGGCCTAGGCTCG 59.809 66.667 32.18 17.54 37.50 5.03
512 513 2.588856 ATAGAAGGGCCGTTCCGTGC 62.589 60.000 29.74 9.82 34.94 5.34
513 514 0.748450 TATAGAAGGGCCGTTCCGTG 59.252 55.000 29.74 0.00 34.94 4.94
514 515 1.488390 TTATAGAAGGGCCGTTCCGT 58.512 50.000 29.74 21.71 34.94 4.69
515 516 2.480845 CTTTATAGAAGGGCCGTTCCG 58.519 52.381 29.74 11.31 34.94 4.30
516 517 2.847441 CCTTTATAGAAGGGCCGTTCC 58.153 52.381 29.74 15.08 33.79 3.62
524 525 4.392940 CCATGTCAGCCCTTTATAGAAGG 58.607 47.826 0.00 0.00 37.17 3.46
525 526 4.392940 CCCATGTCAGCCCTTTATAGAAG 58.607 47.826 0.00 0.00 0.00 2.85
526 527 3.435026 GCCCATGTCAGCCCTTTATAGAA 60.435 47.826 0.00 0.00 0.00 2.10
527 528 2.106511 GCCCATGTCAGCCCTTTATAGA 59.893 50.000 0.00 0.00 0.00 1.98
528 529 2.508526 GCCCATGTCAGCCCTTTATAG 58.491 52.381 0.00 0.00 0.00 1.31
529 530 1.144913 GGCCCATGTCAGCCCTTTATA 59.855 52.381 7.28 0.00 43.76 0.98
530 531 0.106015 GGCCCATGTCAGCCCTTTAT 60.106 55.000 7.28 0.00 43.76 1.40
531 532 1.306296 GGCCCATGTCAGCCCTTTA 59.694 57.895 7.28 0.00 43.76 1.85
532 533 2.037847 GGCCCATGTCAGCCCTTT 59.962 61.111 7.28 0.00 43.76 3.11
553 554 1.228367 GCAGACCTGGCCATATGGG 60.228 63.158 23.30 6.54 40.85 4.00
554 555 0.250640 GAGCAGACCTGGCCATATGG 60.251 60.000 18.07 18.07 38.53 2.74
555 556 0.250640 GGAGCAGACCTGGCCATATG 60.251 60.000 5.51 0.00 0.00 1.78
556 557 0.695462 TGGAGCAGACCTGGCCATAT 60.695 55.000 5.51 0.00 0.00 1.78
557 558 1.306911 TGGAGCAGACCTGGCCATA 60.307 57.895 5.51 0.00 0.00 2.74
558 559 2.611800 TGGAGCAGACCTGGCCAT 60.612 61.111 5.51 0.00 0.00 4.40
559 560 3.324930 CTGGAGCAGACCTGGCCA 61.325 66.667 4.71 4.71 32.44 5.36
560 561 3.005539 TCTGGAGCAGACCTGGCC 61.006 66.667 0.00 0.00 35.39 5.36
567 568 1.048601 AAAACTCGGTCTGGAGCAGA 58.951 50.000 0.84 0.00 38.25 4.26
568 569 1.801178 GAAAAACTCGGTCTGGAGCAG 59.199 52.381 0.84 0.00 37.57 4.24
569 570 1.416401 AGAAAAACTCGGTCTGGAGCA 59.584 47.619 0.84 0.00 37.57 4.26
570 571 2.171341 AGAAAAACTCGGTCTGGAGC 57.829 50.000 0.00 0.00 37.57 4.70
571 572 5.297029 AGAAAAAGAAAAACTCGGTCTGGAG 59.703 40.000 0.00 0.00 39.97 3.86
572 573 5.190677 AGAAAAAGAAAAACTCGGTCTGGA 58.809 37.500 0.00 0.00 0.00 3.86
573 574 5.500645 AGAAAAAGAAAAACTCGGTCTGG 57.499 39.130 0.00 0.00 0.00 3.86
574 575 7.027161 TGAAAGAAAAAGAAAAACTCGGTCTG 58.973 34.615 0.00 0.00 0.00 3.51
575 576 7.120726 TCTGAAAGAAAAAGAAAAACTCGGTCT 59.879 33.333 0.00 0.00 42.31 3.85
576 577 7.248437 TCTGAAAGAAAAAGAAAAACTCGGTC 58.752 34.615 0.00 0.00 42.31 4.79
577 578 7.153217 TCTGAAAGAAAAAGAAAAACTCGGT 57.847 32.000 0.00 0.00 42.31 4.69
592 593 2.421361 GCCCGCTTGGTTCTGAAAGAA 61.421 52.381 0.00 0.00 44.99 2.52
593 594 0.889186 GCCCGCTTGGTTCTGAAAGA 60.889 55.000 0.00 0.00 37.18 2.52
594 595 0.890996 AGCCCGCTTGGTTCTGAAAG 60.891 55.000 0.00 0.00 36.04 2.62
595 596 0.889186 GAGCCCGCTTGGTTCTGAAA 60.889 55.000 0.00 0.00 40.97 2.69
596 597 1.302511 GAGCCCGCTTGGTTCTGAA 60.303 57.895 0.00 0.00 40.97 3.02
597 598 2.347490 GAGCCCGCTTGGTTCTGA 59.653 61.111 0.00 0.00 40.97 3.27
600 601 1.302511 TGAAGAGCCCGCTTGGTTC 60.303 57.895 0.00 0.00 44.32 3.62
601 602 1.600916 GTGAAGAGCCCGCTTGGTT 60.601 57.895 0.00 0.00 36.04 3.67
602 603 2.032681 GTGAAGAGCCCGCTTGGT 59.967 61.111 0.00 0.00 36.04 3.67
603 604 1.743252 GAGTGAAGAGCCCGCTTGG 60.743 63.158 0.00 0.00 37.09 3.61
604 605 1.743252 GGAGTGAAGAGCCCGCTTG 60.743 63.158 0.00 0.00 0.00 4.01
605 606 1.915769 AGGAGTGAAGAGCCCGCTT 60.916 57.895 0.00 0.00 0.00 4.68
606 607 2.284258 AGGAGTGAAGAGCCCGCT 60.284 61.111 0.00 0.00 0.00 5.52
607 608 2.125350 CAGGAGTGAAGAGCCCGC 60.125 66.667 0.00 0.00 0.00 6.13
608 609 2.581354 CCAGGAGTGAAGAGCCCG 59.419 66.667 0.00 0.00 0.00 6.13
609 610 2.129555 TTGCCAGGAGTGAAGAGCCC 62.130 60.000 0.00 0.00 0.00 5.19
610 611 0.250901 TTTGCCAGGAGTGAAGAGCC 60.251 55.000 0.00 0.00 0.00 4.70
611 612 1.609208 TTTTGCCAGGAGTGAAGAGC 58.391 50.000 0.00 0.00 0.00 4.09
612 613 3.192212 GGAATTTTGCCAGGAGTGAAGAG 59.808 47.826 0.00 0.00 0.00 2.85
613 614 3.157087 GGAATTTTGCCAGGAGTGAAGA 58.843 45.455 0.00 0.00 0.00 2.87
614 615 2.232208 GGGAATTTTGCCAGGAGTGAAG 59.768 50.000 0.00 0.00 38.72 3.02
615 616 2.247358 GGGAATTTTGCCAGGAGTGAA 58.753 47.619 0.00 0.00 38.72 3.18
616 617 1.549950 GGGGAATTTTGCCAGGAGTGA 60.550 52.381 3.16 0.00 40.96 3.41
617 618 0.897621 GGGGAATTTTGCCAGGAGTG 59.102 55.000 3.16 0.00 40.96 3.51
644 645 1.668237 GGAGATTTTGAGGAAGCGAGC 59.332 52.381 0.00 0.00 0.00 5.03
648 649 1.065418 TCGGGGAGATTTTGAGGAAGC 60.065 52.381 0.00 0.00 0.00 3.86
649 650 3.135530 AGATCGGGGAGATTTTGAGGAAG 59.864 47.826 0.00 0.00 40.26 3.46
760 769 1.655329 GACTAGGATGACCGGCGAG 59.345 63.158 9.30 0.06 41.83 5.03
761 770 2.184830 CGACTAGGATGACCGGCGA 61.185 63.158 9.30 0.00 41.83 5.54
762 771 2.119147 CTCGACTAGGATGACCGGCG 62.119 65.000 0.00 0.00 41.83 6.46
763 772 1.655329 CTCGACTAGGATGACCGGC 59.345 63.158 0.00 0.00 41.83 6.13
764 773 0.820074 AGCTCGACTAGGATGACCGG 60.820 60.000 0.00 0.00 41.83 5.28
765 774 0.589223 GAGCTCGACTAGGATGACCG 59.411 60.000 0.00 0.00 41.83 4.79
766 775 0.589223 CGAGCTCGACTAGGATGACC 59.411 60.000 32.06 0.00 43.02 4.02
767 776 1.262151 GACGAGCTCGACTAGGATGAC 59.738 57.143 40.58 14.30 43.02 3.06
768 777 1.134491 TGACGAGCTCGACTAGGATGA 60.134 52.381 40.58 15.20 43.02 2.92
769 778 1.003331 GTGACGAGCTCGACTAGGATG 60.003 57.143 40.58 10.53 43.02 3.51
770 779 1.301423 GTGACGAGCTCGACTAGGAT 58.699 55.000 40.58 18.13 43.02 3.24
771 780 0.743701 GGTGACGAGCTCGACTAGGA 60.744 60.000 40.58 17.06 43.02 2.94
772 781 0.745128 AGGTGACGAGCTCGACTAGG 60.745 60.000 40.58 12.87 43.02 3.02
773 782 1.062880 GAAGGTGACGAGCTCGACTAG 59.937 57.143 40.58 13.65 43.02 2.57
774 783 1.085091 GAAGGTGACGAGCTCGACTA 58.915 55.000 40.58 22.81 43.02 2.59
775 784 1.587933 GGAAGGTGACGAGCTCGACT 61.588 60.000 40.58 27.01 43.02 4.18
853 862 2.826738 GCGACGAGGAGGAGAGCT 60.827 66.667 0.00 0.00 0.00 4.09
854 863 3.894947 GGCGACGAGGAGGAGAGC 61.895 72.222 0.00 0.00 0.00 4.09
888 897 4.409218 GTACACGACGCAGCGGGA 62.409 66.667 21.15 0.00 38.25 5.14
907 916 0.031585 CCGTCCACGACAAAGACAGA 59.968 55.000 0.00 0.00 43.02 3.41
936 945 1.066143 CGAGTTACAGGTGGATGGCTT 60.066 52.381 0.00 0.00 0.00 4.35
952 961 4.070552 GGAAGACCTGCCGCGAGT 62.071 66.667 8.23 0.00 0.00 4.18
969 979 1.001269 GGAAAAGGGGAGGGTTCCG 60.001 63.158 0.00 0.00 45.04 4.30
1231 1241 4.354987 AGGGAGCATGTAACATTGGGATAT 59.645 41.667 0.00 0.00 0.00 1.63
1232 1242 3.721575 AGGGAGCATGTAACATTGGGATA 59.278 43.478 0.00 0.00 0.00 2.59
1233 1243 2.515429 AGGGAGCATGTAACATTGGGAT 59.485 45.455 0.00 0.00 0.00 3.85
1244 1254 1.599047 CCAGACGAAGGGAGCATGT 59.401 57.895 0.00 0.00 0.00 3.21
1299 1310 7.822161 TTGCTAATCAAATGCAGTATATGGT 57.178 32.000 0.00 0.00 38.01 3.55
1300 1311 9.701098 ATTTTGCTAATCAAATGCAGTATATGG 57.299 29.630 0.00 0.00 43.53 2.74
1439 1617 9.761504 GTACTTCCTCTATCCAGGTTTATTAAC 57.238 37.037 0.00 0.00 34.76 2.01
1493 1671 8.173130 GCCAGATCAGAAAAATAAAAGCAATTG 58.827 33.333 0.00 0.00 0.00 2.32
1573 1751 3.446161 AGCTGTATAGTTCCTTACACGCA 59.554 43.478 0.00 0.00 31.10 5.24
1606 1784 3.314635 CAGCAATGTATTCTGCCTTCTCC 59.685 47.826 0.00 0.00 39.47 3.71
1666 1844 5.996513 GGCATCATCAATGTCAGAGTAGAAT 59.003 40.000 0.00 0.00 39.90 2.40
1679 1857 4.259356 CTCCGACATATGGCATCATCAAT 58.741 43.478 9.77 0.00 34.96 2.57
1684 1862 0.686789 CCCTCCGACATATGGCATCA 59.313 55.000 9.77 0.00 0.00 3.07
1881 2059 3.034030 GCAACAGCTGCCTCGTTT 58.966 55.556 15.27 0.00 46.13 3.60
1908 2086 0.251386 ACTCTCAGAGACCGCCTTCA 60.251 55.000 9.27 0.00 33.32 3.02
1921 2099 1.633774 GGTCAAGTCCCAGACTCTCA 58.366 55.000 0.00 0.00 42.59 3.27
1927 2105 2.879233 GCCACGGTCAAGTCCCAGA 61.879 63.158 0.00 0.00 0.00 3.86
1947 2125 6.601332 TCAAGGTTTAGGACTTCAGAAATGT 58.399 36.000 0.00 0.00 0.00 2.71
2022 2200 3.273351 TGAAATTCCCATAACCCCATCCA 59.727 43.478 0.00 0.00 0.00 3.41
2292 2471 0.038599 TGCTCACAATCTGCACCCAT 59.961 50.000 0.00 0.00 0.00 4.00
2535 2714 1.522806 GTCACCCTGCACACGAACA 60.523 57.895 0.00 0.00 0.00 3.18
2667 2846 3.469739 GAAGAGGAGGGAGTACTACGAG 58.530 54.545 0.00 0.00 0.00 4.18
2782 6346 0.462581 TCTGACCATGCGAGCATTCC 60.463 55.000 7.97 1.55 33.90 3.01
2803 6367 0.482446 TGAACCCAAGGCTTCACCAT 59.518 50.000 0.00 0.00 43.14 3.55
2883 6447 2.311463 AGCTCCGCTGACTGTACATAT 58.689 47.619 0.00 0.00 37.57 1.78
2909 6473 7.826252 AGTTCAGCTGTGACAGTGAATAATATT 59.174 33.333 23.26 0.00 35.64 1.28
2923 6487 3.088532 ACCAACAAAAGTTCAGCTGTGA 58.911 40.909 14.67 0.54 0.00 3.58
3016 6580 6.432162 TCCTTCAAGTTCAGAAATCTTCATGG 59.568 38.462 0.00 0.00 0.00 3.66
3017 6581 7.303998 GTCCTTCAAGTTCAGAAATCTTCATG 58.696 38.462 0.00 0.00 0.00 3.07
3018 6582 6.432472 GGTCCTTCAAGTTCAGAAATCTTCAT 59.568 38.462 0.00 0.00 0.00 2.57
3019 6583 5.765182 GGTCCTTCAAGTTCAGAAATCTTCA 59.235 40.000 0.00 0.00 0.00 3.02
3020 6584 5.765182 TGGTCCTTCAAGTTCAGAAATCTTC 59.235 40.000 0.00 0.00 0.00 2.87
3034 6608 1.202915 TCTTGCTGCATGGTCCTTCAA 60.203 47.619 14.55 0.00 0.00 2.69
3079 6653 7.252965 TGAAACATGATGTTGTCTTCGTTTA 57.747 32.000 12.09 0.00 40.14 2.01
3125 6700 1.494721 ACCTCTTTCAAGCTGACCCAA 59.505 47.619 0.00 0.00 0.00 4.12
3145 6720 3.726557 AGTCTTTGATCCCAGCAATCA 57.273 42.857 0.00 0.00 0.00 2.57
3242 6956 1.137872 CTAGGGTCCAGCACATCACTC 59.862 57.143 0.00 0.00 0.00 3.51
3267 6981 6.015519 TCCTCAATACCAACTTGTTCCAAATG 60.016 38.462 0.00 0.00 0.00 2.32
3271 6985 4.394729 GTCCTCAATACCAACTTGTTCCA 58.605 43.478 0.00 0.00 0.00 3.53
3273 6987 3.756963 GGGTCCTCAATACCAACTTGTTC 59.243 47.826 0.00 0.00 38.87 3.18
3295 7009 9.150348 GGGACCAATTTTAACAAAACTATCATG 57.850 33.333 0.00 0.00 32.37 3.07
3302 7016 6.970043 GCAAAAGGGACCAATTTTAACAAAAC 59.030 34.615 6.39 0.00 32.37 2.43
3309 7023 3.645687 AGCTGCAAAAGGGACCAATTTTA 59.354 39.130 1.02 0.00 0.00 1.52
3351 7067 7.596248 AGCACACTTAATTGTCAATTGTCAATC 59.404 33.333 24.59 13.36 33.82 2.67
3366 7082 8.511604 AGTTAATTATGAGCAGCACACTTAAT 57.488 30.769 0.00 0.00 0.00 1.40
3388 7104 5.491982 CAACCCTTGCTTAGACTCATAGTT 58.508 41.667 0.00 0.00 0.00 2.24
3413 7129 1.402787 CAGGGGCAAAAAGTGAGTGT 58.597 50.000 0.00 0.00 0.00 3.55
3420 7136 2.040412 AGAGTAGACCAGGGGCAAAAAG 59.960 50.000 0.00 0.00 0.00 2.27
3425 7141 1.306141 CCAGAGTAGACCAGGGGCA 60.306 63.158 0.00 0.00 0.00 5.36
3426 7142 0.910088 AACCAGAGTAGACCAGGGGC 60.910 60.000 0.00 0.00 0.00 5.80
3490 7368 9.354673 TCATTTAGATCCAGTCTTTTGTTTTCT 57.645 29.630 0.00 0.00 38.42 2.52
3498 7376 5.677319 TCGGTCATTTAGATCCAGTCTTT 57.323 39.130 0.00 0.00 38.42 2.52
3504 7382 7.880160 AAATCATTTCGGTCATTTAGATCCA 57.120 32.000 0.00 0.00 0.00 3.41
3545 7423 9.414295 GGTTTGAGTTGTTTTATTTACCCATAC 57.586 33.333 0.00 0.00 0.00 2.39
3546 7424 8.586744 GGGTTTGAGTTGTTTTATTTACCCATA 58.413 33.333 0.00 0.00 40.88 2.74
3571 7449 2.421529 GGTGCTAAGTATGTTGAGGGGG 60.422 54.545 0.00 0.00 0.00 5.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.