Multiple sequence alignment - TraesCS3B01G350200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G350200 | chr3B | 100.000 | 6371 | 0 | 0 | 1 | 6371 | 560422463 | 560428833 | 0.000000e+00 | 11766.0 |
1 | TraesCS3B01G350200 | chr3D | 93.344 | 5995 | 209 | 78 | 1 | 5854 | 428511813 | 428517758 | 0.000000e+00 | 8685.0 |
2 | TraesCS3B01G350200 | chr3A | 93.832 | 4053 | 135 | 42 | 1847 | 5826 | 557020164 | 557016154 | 0.000000e+00 | 5993.0 |
3 | TraesCS3B01G350200 | chr3A | 89.506 | 1801 | 94 | 48 | 77 | 1806 | 557021937 | 557020161 | 0.000000e+00 | 2191.0 |
4 | TraesCS3B01G350200 | chr3A | 91.304 | 92 | 5 | 2 | 6142 | 6231 | 557015731 | 557015641 | 8.670000e-24 | 122.0 |
5 | TraesCS3B01G350200 | chr5D | 93.478 | 46 | 1 | 2 | 6282 | 6327 | 451487539 | 451487582 | 4.120000e-07 | 67.6 |
6 | TraesCS3B01G350200 | chr5D | 100.000 | 28 | 0 | 0 | 6321 | 6348 | 451487568 | 451487595 | 1.200000e-02 | 52.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G350200 | chr3B | 560422463 | 560428833 | 6370 | False | 11766.000000 | 11766 | 100.000000 | 1 | 6371 | 1 | chr3B.!!$F1 | 6370 |
1 | TraesCS3B01G350200 | chr3D | 428511813 | 428517758 | 5945 | False | 8685.000000 | 8685 | 93.344000 | 1 | 5854 | 1 | chr3D.!!$F1 | 5853 |
2 | TraesCS3B01G350200 | chr3A | 557015641 | 557021937 | 6296 | True | 2768.666667 | 5993 | 91.547333 | 77 | 6231 | 3 | chr3A.!!$R1 | 6154 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
524 | 563 | 0.032615 | TTGTGTCCCAAGCCAAACCT | 60.033 | 50.000 | 0.00 | 0.0 | 0.00 | 3.50 | F |
705 | 746 | 0.103208 | GATTCGCACCCGTGAGATCT | 59.897 | 55.000 | 0.00 | 0.0 | 39.08 | 2.75 | F |
1126 | 1200 | 0.196118 | TCTCCTTTCCCCCTCACCTT | 59.804 | 55.000 | 0.00 | 0.0 | 0.00 | 3.50 | F |
1162 | 1236 | 1.089481 | TGATCCATTGCTCGCGTTCC | 61.089 | 55.000 | 5.77 | 0.0 | 0.00 | 3.62 | F |
1163 | 1237 | 2.094126 | GATCCATTGCTCGCGTTCCG | 62.094 | 60.000 | 5.77 | 0.0 | 38.61 | 4.30 | F |
2833 | 2946 | 2.105766 | ACCTACCTGTGTTATCCGTCC | 58.894 | 52.381 | 0.00 | 0.0 | 0.00 | 4.79 | F |
2840 | 2953 | 4.099573 | ACCTGTGTTATCCGTCCTTAGATG | 59.900 | 45.833 | 0.00 | 0.0 | 0.00 | 2.90 | F |
4738 | 4862 | 0.174162 | GTTCCATGCATCAGGTTGCC | 59.826 | 55.000 | 0.00 | 0.0 | 42.06 | 4.52 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1384 | 1472 | 2.032030 | AGGACAAAAGCGAAACGTCATG | 60.032 | 45.455 | 0.00 | 0.00 | 0.00 | 3.07 | R |
1656 | 1758 | 2.093306 | TATTGTCTGTGTTGGCCTCG | 57.907 | 50.000 | 3.32 | 0.00 | 0.00 | 4.63 | R |
2976 | 3089 | 2.928116 | GGGCATAGTTTGTCAGTACGAC | 59.072 | 50.000 | 9.87 | 9.87 | 45.61 | 4.34 | R |
3693 | 3811 | 1.338107 | ATCAGACACCTTCACGACCA | 58.662 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 | R |
3844 | 3962 | 4.598022 | TGATTTGTTATGGATGCAGACCA | 58.402 | 39.130 | 15.98 | 15.98 | 41.83 | 4.02 | R |
4738 | 4862 | 0.741221 | GGTAAGCTCCCTCTTGTGCG | 60.741 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 | R |
5229 | 5378 | 1.404391 | CCAGCATCCAATCAGTGCTTC | 59.596 | 52.381 | 0.00 | 0.00 | 46.29 | 3.86 | R |
6090 | 6485 | 0.031585 | TGACGACGACCTCCACAAAG | 59.968 | 55.000 | 0.00 | 0.00 | 0.00 | 2.77 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
26 | 27 | 1.207089 | TCCATGGATGACGAGGTTCAC | 59.793 | 52.381 | 11.44 | 0.00 | 0.00 | 3.18 |
32 | 33 | 3.119137 | TGGATGACGAGGTTCACTATGTG | 60.119 | 47.826 | 0.00 | 0.00 | 34.45 | 3.21 |
34 | 35 | 1.067142 | TGACGAGGTTCACTATGTGGC | 60.067 | 52.381 | 0.00 | 0.00 | 33.87 | 5.01 |
150 | 162 | 3.429547 | CCACAAACAAATTGGTCCACGAA | 60.430 | 43.478 | 0.00 | 0.00 | 43.66 | 3.85 |
363 | 387 | 0.560688 | TTTCCCAAGACCCAAAGCCT | 59.439 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
370 | 394 | 0.329596 | AGACCCAAAGCCTAGGCAAG | 59.670 | 55.000 | 34.70 | 22.34 | 44.88 | 4.01 |
440 | 479 | 1.303888 | TACTCCGCCCGTCTGAACT | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 3.01 |
460 | 499 | 3.456277 | ACTCTTGCCGAAAATATCTCCCT | 59.544 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
487 | 526 | 3.470888 | CTGTACCCTCCCTGCCCG | 61.471 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
522 | 561 | 3.965780 | CTTGTGTCCCAAGCCAAAC | 57.034 | 52.632 | 0.00 | 0.00 | 43.84 | 2.93 |
524 | 563 | 0.032615 | TTGTGTCCCAAGCCAAACCT | 60.033 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
701 | 742 | 2.456119 | GCAGATTCGCACCCGTGAG | 61.456 | 63.158 | 0.00 | 0.00 | 35.54 | 3.51 |
705 | 746 | 0.103208 | GATTCGCACCCGTGAGATCT | 59.897 | 55.000 | 0.00 | 0.00 | 39.08 | 2.75 |
706 | 747 | 0.103208 | ATTCGCACCCGTGAGATCTC | 59.897 | 55.000 | 16.21 | 16.21 | 39.08 | 2.75 |
836 | 878 | 2.194201 | CCATCGGTTGGTTACTTGGT | 57.806 | 50.000 | 0.00 | 0.00 | 40.99 | 3.67 |
991 | 1045 | 4.794439 | CGCAGATCGACGCCCACA | 62.794 | 66.667 | 0.00 | 0.00 | 41.67 | 4.17 |
992 | 1046 | 2.887568 | GCAGATCGACGCCCACAG | 60.888 | 66.667 | 0.00 | 0.00 | 0.00 | 3.66 |
1122 | 1196 | 1.612442 | CCGTCTCCTTTCCCCCTCA | 60.612 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
1124 | 1198 | 1.900545 | CGTCTCCTTTCCCCCTCACC | 61.901 | 65.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1125 | 1199 | 0.547954 | GTCTCCTTTCCCCCTCACCT | 60.548 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1126 | 1200 | 0.196118 | TCTCCTTTCCCCCTCACCTT | 59.804 | 55.000 | 0.00 | 0.00 | 0.00 | 3.50 |
1128 | 1202 | 1.304464 | CCTTTCCCCCTCACCTTGC | 60.304 | 63.158 | 0.00 | 0.00 | 0.00 | 4.01 |
1129 | 1203 | 1.304464 | CTTTCCCCCTCACCTTGCC | 60.304 | 63.158 | 0.00 | 0.00 | 0.00 | 4.52 |
1157 | 1231 | 2.634982 | TGTTTTGATCCATTGCTCGC | 57.365 | 45.000 | 0.00 | 0.00 | 0.00 | 5.03 |
1162 | 1236 | 1.089481 | TGATCCATTGCTCGCGTTCC | 61.089 | 55.000 | 5.77 | 0.00 | 0.00 | 3.62 |
1163 | 1237 | 2.094126 | GATCCATTGCTCGCGTTCCG | 62.094 | 60.000 | 5.77 | 0.00 | 38.61 | 4.30 |
1165 | 1239 | 2.395690 | CATTGCTCGCGTTCCGTC | 59.604 | 61.111 | 5.77 | 0.00 | 38.35 | 4.79 |
1338 | 1426 | 5.351189 | GCGGGCTGATTGATTTGTTTAATTT | 59.649 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
1357 | 1445 | 3.804786 | TTACGAATTGCTCCGGTGATA | 57.195 | 42.857 | 7.92 | 0.00 | 0.00 | 2.15 |
1384 | 1472 | 5.235186 | CAGCAACTCCATTACTGCACTATAC | 59.765 | 44.000 | 0.00 | 0.00 | 37.26 | 1.47 |
1389 | 1477 | 6.516718 | ACTCCATTACTGCACTATACATGAC | 58.483 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1402 | 1490 | 4.742438 | ATACATGACGTTTCGCTTTTGT | 57.258 | 36.364 | 0.00 | 0.00 | 0.00 | 2.83 |
1500 | 1599 | 2.604174 | GCGTTGTGTTCGTGAGGGG | 61.604 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
1508 | 1607 | 4.317488 | TGTGTTCGTGAGGGGTTAATTAC | 58.683 | 43.478 | 0.00 | 0.00 | 0.00 | 1.89 |
1570 | 1669 | 5.511888 | CCTGAAATTTCAAGCTGGGTTCATT | 60.512 | 40.000 | 20.82 | 0.00 | 36.64 | 2.57 |
1571 | 1670 | 6.295236 | CCTGAAATTTCAAGCTGGGTTCATTA | 60.295 | 38.462 | 20.82 | 0.00 | 36.64 | 1.90 |
1589 | 1688 | 6.844696 | TCATTATAAGTCGTTCTTGGCATC | 57.155 | 37.500 | 0.00 | 0.00 | 37.56 | 3.91 |
1623 | 1722 | 7.660208 | TCTGTGATTTTGAAGTAGAAACCTACC | 59.340 | 37.037 | 0.00 | 0.00 | 37.76 | 3.18 |
1704 | 1806 | 5.744171 | TGCATGGTATATAAGGCGATCATT | 58.256 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
1719 | 1821 | 7.378181 | AGGCGATCATTTCTTTACATTTGTTT | 58.622 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
1803 | 1905 | 5.897250 | TGGATACAGTGAGGTAGCAGAATAA | 59.103 | 40.000 | 0.00 | 0.00 | 46.17 | 1.40 |
1829 | 1931 | 9.840427 | ATAAGATTTACCTGAAAACGTGATTTG | 57.160 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
1831 | 1933 | 7.936584 | AGATTTACCTGAAAACGTGATTTGAA | 58.063 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
1833 | 1935 | 9.191995 | GATTTACCTGAAAACGTGATTTGAATT | 57.808 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
1942 | 2044 | 4.688879 | TGTTGCACAATCTAGTTCGTAAGG | 59.311 | 41.667 | 0.00 | 0.00 | 38.47 | 2.69 |
2034 | 2136 | 8.139989 | TCTTTACCATAGTAAATTAGCTCCGTC | 58.860 | 37.037 | 0.00 | 0.00 | 45.16 | 4.79 |
2833 | 2946 | 2.105766 | ACCTACCTGTGTTATCCGTCC | 58.894 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
2840 | 2953 | 4.099573 | ACCTGTGTTATCCGTCCTTAGATG | 59.900 | 45.833 | 0.00 | 0.00 | 0.00 | 2.90 |
2905 | 3018 | 6.403866 | AAACCTTGATCAAATAACTGTGCA | 57.596 | 33.333 | 9.88 | 0.00 | 0.00 | 4.57 |
2967 | 3080 | 7.643569 | ATGCAATACACTCCAATTGACAATA | 57.356 | 32.000 | 7.12 | 0.00 | 35.53 | 1.90 |
2976 | 3089 | 7.037438 | CACTCCAATTGACAATATTTTCCCAG | 58.963 | 38.462 | 7.12 | 0.00 | 0.00 | 4.45 |
3844 | 3962 | 5.700402 | AGCAAGTTGGTCAGGTATATCTT | 57.300 | 39.130 | 0.63 | 0.00 | 0.00 | 2.40 |
3873 | 3991 | 8.579006 | TCTGCATCCATAACAAATCATATTTCC | 58.421 | 33.333 | 0.00 | 0.00 | 0.00 | 3.13 |
4204 | 4324 | 6.042781 | TCTCTTGAGGTGGAAAAGTTTAGCTA | 59.957 | 38.462 | 0.00 | 0.00 | 0.00 | 3.32 |
4208 | 4328 | 6.362248 | TGAGGTGGAAAAGTTTAGCTAGTTT | 58.638 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
4212 | 4332 | 8.161425 | AGGTGGAAAAGTTTAGCTAGTTTGATA | 58.839 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
4214 | 4334 | 9.608617 | GTGGAAAAGTTTAGCTAGTTTGATAAC | 57.391 | 33.333 | 0.00 | 0.00 | 34.36 | 1.89 |
4298 | 4422 | 6.929049 | TGCTATGCCAACTAGTATACATGTTC | 59.071 | 38.462 | 2.30 | 0.00 | 0.00 | 3.18 |
4738 | 4862 | 0.174162 | GTTCCATGCATCAGGTTGCC | 59.826 | 55.000 | 0.00 | 0.00 | 42.06 | 4.52 |
4923 | 5047 | 8.858186 | TGTGCAATGTCAATAAAATGTAAATCG | 58.142 | 29.630 | 0.00 | 0.00 | 0.00 | 3.34 |
4971 | 5095 | 9.698309 | CCAGTAAAGGTCTGTAGATATATGTTG | 57.302 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
5114 | 5263 | 2.267324 | GGTGGAGAGCAGACTGCC | 59.733 | 66.667 | 23.74 | 14.87 | 46.52 | 4.85 |
5229 | 5378 | 2.951642 | TGCTTTGTTCCTTCTCCACTTG | 59.048 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
5456 | 5616 | 0.596082 | CCTTCCGCACCATTCGTTTT | 59.404 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
5524 | 5684 | 7.332182 | AGGTTTTGTTCGCAAATTTTGTTCTTA | 59.668 | 29.630 | 10.65 | 0.00 | 45.34 | 2.10 |
5531 | 5691 | 7.441890 | TCGCAAATTTTGTTCTTACCAGATA | 57.558 | 32.000 | 10.65 | 0.00 | 0.00 | 1.98 |
5532 | 5692 | 7.302524 | TCGCAAATTTTGTTCTTACCAGATAC | 58.697 | 34.615 | 10.65 | 0.00 | 0.00 | 2.24 |
5533 | 5693 | 7.174253 | TCGCAAATTTTGTTCTTACCAGATACT | 59.826 | 33.333 | 10.65 | 0.00 | 0.00 | 2.12 |
5534 | 5694 | 8.447833 | CGCAAATTTTGTTCTTACCAGATACTA | 58.552 | 33.333 | 10.65 | 0.00 | 0.00 | 1.82 |
5625 | 5786 | 5.103473 | TCAGGTGTCCCTAGTAGAGATGATT | 60.103 | 44.000 | 0.00 | 0.00 | 39.89 | 2.57 |
5632 | 5793 | 7.240828 | TGTCCCTAGTAGAGATGATTAGAGGAT | 59.759 | 40.741 | 0.00 | 0.00 | 0.00 | 3.24 |
5684 | 5848 | 4.835678 | TGCTCTTCTTGCATGAGAATACA | 58.164 | 39.130 | 0.00 | 0.00 | 35.27 | 2.29 |
5707 | 5871 | 7.283329 | ACAAGTCTAGATTCCTCTTTGTTTGT | 58.717 | 34.615 | 0.00 | 0.00 | 28.78 | 2.83 |
5708 | 5872 | 7.442666 | ACAAGTCTAGATTCCTCTTTGTTTGTC | 59.557 | 37.037 | 0.00 | 0.00 | 28.78 | 3.18 |
5725 | 5902 | 7.579589 | TGTTTGTCTTGTGAAATGAAACTTG | 57.420 | 32.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5728 | 5905 | 4.709397 | TGTCTTGTGAAATGAAACTTGGGT | 59.291 | 37.500 | 0.00 | 0.00 | 0.00 | 4.51 |
5730 | 5907 | 3.980646 | TGTGAAATGAAACTTGGGTCG | 57.019 | 42.857 | 0.00 | 0.00 | 0.00 | 4.79 |
5764 | 5941 | 1.239347 | GGAGCAATCGCCCTTATTCC | 58.761 | 55.000 | 0.00 | 0.00 | 39.83 | 3.01 |
5765 | 5942 | 1.202818 | GGAGCAATCGCCCTTATTCCT | 60.203 | 52.381 | 0.00 | 0.00 | 39.83 | 3.36 |
5766 | 5943 | 2.147150 | GAGCAATCGCCCTTATTCCTC | 58.853 | 52.381 | 0.00 | 0.00 | 39.83 | 3.71 |
5767 | 5944 | 1.490490 | AGCAATCGCCCTTATTCCTCA | 59.510 | 47.619 | 0.00 | 0.00 | 39.83 | 3.86 |
5820 | 5998 | 3.126514 | GCAGAGCATAATCAATCATCGGG | 59.873 | 47.826 | 0.00 | 0.00 | 0.00 | 5.14 |
5859 | 6037 | 4.628333 | ACAATACGACAACTAAATGACCGG | 59.372 | 41.667 | 0.00 | 0.00 | 0.00 | 5.28 |
5861 | 6039 | 2.409975 | ACGACAACTAAATGACCGGTG | 58.590 | 47.619 | 14.63 | 0.00 | 0.00 | 4.94 |
5862 | 6040 | 1.730064 | CGACAACTAAATGACCGGTGG | 59.270 | 52.381 | 14.63 | 0.00 | 0.00 | 4.61 |
5863 | 6041 | 2.610976 | CGACAACTAAATGACCGGTGGA | 60.611 | 50.000 | 14.63 | 0.00 | 0.00 | 4.02 |
5864 | 6042 | 2.740447 | GACAACTAAATGACCGGTGGAC | 59.260 | 50.000 | 14.63 | 0.00 | 0.00 | 4.02 |
5875 | 6053 | 4.101448 | GGTGGACGGCCTGAGCAT | 62.101 | 66.667 | 9.82 | 0.00 | 42.56 | 3.79 |
5883 | 6278 | 2.894387 | GCCTGAGCATCCTCGTGC | 60.894 | 66.667 | 0.00 | 0.00 | 45.38 | 5.34 |
5896 | 6291 | 3.857854 | CGTGCTCAGTGCCGATGC | 61.858 | 66.667 | 0.00 | 0.00 | 42.00 | 3.91 |
5933 | 6328 | 1.078567 | GTGGCCTCCTTGCTCTCTG | 60.079 | 63.158 | 3.32 | 0.00 | 0.00 | 3.35 |
5935 | 6330 | 1.992277 | GGCCTCCTTGCTCTCTGGA | 60.992 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
5937 | 6332 | 0.392327 | GCCTCCTTGCTCTCTGGAAC | 60.392 | 60.000 | 0.00 | 0.00 | 0.00 | 3.62 |
5938 | 6333 | 0.108424 | CCTCCTTGCTCTCTGGAACG | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
5939 | 6334 | 0.108424 | CTCCTTGCTCTCTGGAACGG | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 4.44 |
5940 | 6335 | 1.743252 | CCTTGCTCTCTGGAACGGC | 60.743 | 63.158 | 0.00 | 0.00 | 32.53 | 5.68 |
5941 | 6336 | 1.743252 | CTTGCTCTCTGGAACGGCC | 60.743 | 63.158 | 0.00 | 0.00 | 32.53 | 6.13 |
5942 | 6337 | 2.454832 | CTTGCTCTCTGGAACGGCCA | 62.455 | 60.000 | 2.24 | 0.00 | 46.96 | 5.36 |
5943 | 6338 | 2.435059 | GCTCTCTGGAACGGCCAC | 60.435 | 66.667 | 2.24 | 0.00 | 43.33 | 5.01 |
5944 | 6339 | 3.059982 | CTCTCTGGAACGGCCACA | 58.940 | 61.111 | 2.24 | 0.00 | 43.33 | 4.17 |
5945 | 6340 | 1.599047 | CTCTCTGGAACGGCCACAT | 59.401 | 57.895 | 2.24 | 0.00 | 43.33 | 3.21 |
5946 | 6341 | 0.460987 | CTCTCTGGAACGGCCACATC | 60.461 | 60.000 | 2.24 | 0.00 | 43.33 | 3.06 |
5947 | 6342 | 1.191489 | TCTCTGGAACGGCCACATCA | 61.191 | 55.000 | 2.24 | 0.00 | 43.33 | 3.07 |
5948 | 6343 | 0.742281 | CTCTGGAACGGCCACATCAG | 60.742 | 60.000 | 2.24 | 5.15 | 43.33 | 2.90 |
5949 | 6344 | 1.003355 | CTGGAACGGCCACATCAGT | 60.003 | 57.895 | 2.24 | 0.00 | 43.33 | 3.41 |
5950 | 6345 | 1.003839 | TGGAACGGCCACATCAGTC | 60.004 | 57.895 | 2.24 | 0.00 | 43.33 | 3.51 |
5951 | 6346 | 1.003839 | GGAACGGCCACATCAGTCA | 60.004 | 57.895 | 2.24 | 0.00 | 36.34 | 3.41 |
5952 | 6347 | 0.392998 | GGAACGGCCACATCAGTCAT | 60.393 | 55.000 | 2.24 | 0.00 | 36.34 | 3.06 |
5953 | 6348 | 0.729116 | GAACGGCCACATCAGTCATG | 59.271 | 55.000 | 2.24 | 0.00 | 38.64 | 3.07 |
5954 | 6349 | 1.308069 | AACGGCCACATCAGTCATGC | 61.308 | 55.000 | 2.24 | 0.00 | 35.65 | 4.06 |
5955 | 6350 | 2.475466 | CGGCCACATCAGTCATGCC | 61.475 | 63.158 | 2.24 | 0.00 | 35.65 | 4.40 |
5956 | 6351 | 2.475466 | GGCCACATCAGTCATGCCG | 61.475 | 63.158 | 0.00 | 0.00 | 35.65 | 5.69 |
5957 | 6352 | 3.104766 | CCACATCAGTCATGCCGC | 58.895 | 61.111 | 0.00 | 0.00 | 35.65 | 6.53 |
6059 | 6454 | 4.831307 | GTCTCGGTGCGTCGCGAT | 62.831 | 66.667 | 14.06 | 0.00 | 0.00 | 4.58 |
6060 | 6455 | 4.829518 | TCTCGGTGCGTCGCGATG | 62.830 | 66.667 | 23.84 | 23.84 | 0.00 | 3.84 |
6065 | 6460 | 3.864686 | GTGCGTCGCGATGCCATT | 61.865 | 61.111 | 41.16 | 0.00 | 42.47 | 3.16 |
6066 | 6461 | 3.124270 | TGCGTCGCGATGCCATTT | 61.124 | 55.556 | 41.16 | 0.00 | 42.47 | 2.32 |
6067 | 6462 | 2.648724 | GCGTCGCGATGCCATTTG | 60.649 | 61.111 | 37.06 | 10.45 | 37.37 | 2.32 |
6068 | 6463 | 2.784596 | CGTCGCGATGCCATTTGT | 59.215 | 55.556 | 16.48 | 0.00 | 0.00 | 2.83 |
6069 | 6464 | 1.134487 | CGTCGCGATGCCATTTGTT | 59.866 | 52.632 | 16.48 | 0.00 | 0.00 | 2.83 |
6070 | 6465 | 1.127571 | CGTCGCGATGCCATTTGTTG | 61.128 | 55.000 | 16.48 | 0.00 | 0.00 | 3.33 |
6071 | 6466 | 0.167908 | GTCGCGATGCCATTTGTTGA | 59.832 | 50.000 | 14.06 | 0.00 | 0.00 | 3.18 |
6072 | 6467 | 1.093972 | TCGCGATGCCATTTGTTGAT | 58.906 | 45.000 | 3.71 | 0.00 | 0.00 | 2.57 |
6073 | 6468 | 1.193644 | CGCGATGCCATTTGTTGATG | 58.806 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
6081 | 6476 | 2.896168 | CCATTTGTTGATGGCATGGTC | 58.104 | 47.619 | 3.81 | 0.00 | 40.11 | 4.02 |
6082 | 6477 | 2.532235 | CATTTGTTGATGGCATGGTCG | 58.468 | 47.619 | 3.81 | 0.00 | 0.00 | 4.79 |
6083 | 6478 | 0.243365 | TTTGTTGATGGCATGGTCGC | 59.757 | 50.000 | 3.81 | 0.00 | 0.00 | 5.19 |
6084 | 6479 | 0.892814 | TTGTTGATGGCATGGTCGCA | 60.893 | 50.000 | 3.81 | 0.00 | 0.00 | 5.10 |
6085 | 6480 | 1.307355 | TGTTGATGGCATGGTCGCAG | 61.307 | 55.000 | 3.81 | 0.00 | 0.00 | 5.18 |
6086 | 6481 | 2.409055 | TTGATGGCATGGTCGCAGC | 61.409 | 57.895 | 3.81 | 0.00 | 0.00 | 5.25 |
6087 | 6482 | 2.825387 | GATGGCATGGTCGCAGCA | 60.825 | 61.111 | 3.81 | 0.00 | 0.00 | 4.41 |
6088 | 6483 | 2.124024 | ATGGCATGGTCGCAGCAT | 60.124 | 55.556 | 0.00 | 0.00 | 36.65 | 3.79 |
6089 | 6484 | 1.731433 | GATGGCATGGTCGCAGCATT | 61.731 | 55.000 | 3.81 | 0.00 | 33.46 | 3.56 |
6090 | 6485 | 1.731433 | ATGGCATGGTCGCAGCATTC | 61.731 | 55.000 | 0.00 | 0.00 | 33.46 | 2.67 |
6091 | 6486 | 2.117156 | GGCATGGTCGCAGCATTCT | 61.117 | 57.895 | 0.00 | 0.00 | 33.46 | 2.40 |
6092 | 6487 | 1.660560 | GGCATGGTCGCAGCATTCTT | 61.661 | 55.000 | 0.00 | 0.00 | 33.46 | 2.52 |
6093 | 6488 | 0.171903 | GCATGGTCGCAGCATTCTTT | 59.828 | 50.000 | 0.00 | 0.00 | 33.46 | 2.52 |
6094 | 6489 | 1.904144 | CATGGTCGCAGCATTCTTTG | 58.096 | 50.000 | 0.00 | 0.00 | 33.46 | 2.77 |
6095 | 6490 | 1.200716 | CATGGTCGCAGCATTCTTTGT | 59.799 | 47.619 | 0.00 | 0.00 | 33.46 | 2.83 |
6096 | 6491 | 0.592637 | TGGTCGCAGCATTCTTTGTG | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
6097 | 6492 | 0.109597 | GGTCGCAGCATTCTTTGTGG | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
6098 | 6493 | 0.874390 | GTCGCAGCATTCTTTGTGGA | 59.126 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
6099 | 6494 | 1.135859 | GTCGCAGCATTCTTTGTGGAG | 60.136 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
6100 | 6495 | 0.169672 | CGCAGCATTCTTTGTGGAGG | 59.830 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6101 | 6496 | 1.251251 | GCAGCATTCTTTGTGGAGGT | 58.749 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
6102 | 6497 | 1.200948 | GCAGCATTCTTTGTGGAGGTC | 59.799 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
6103 | 6498 | 1.466167 | CAGCATTCTTTGTGGAGGTCG | 59.534 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
6104 | 6499 | 1.072331 | AGCATTCTTTGTGGAGGTCGT | 59.928 | 47.619 | 0.00 | 0.00 | 0.00 | 4.34 |
6105 | 6500 | 1.464997 | GCATTCTTTGTGGAGGTCGTC | 59.535 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
6106 | 6501 | 1.726791 | CATTCTTTGTGGAGGTCGTCG | 59.273 | 52.381 | 0.00 | 0.00 | 0.00 | 5.12 |
6107 | 6502 | 0.748450 | TTCTTTGTGGAGGTCGTCGT | 59.252 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
6108 | 6503 | 0.313043 | TCTTTGTGGAGGTCGTCGTC | 59.687 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
6109 | 6504 | 0.031585 | CTTTGTGGAGGTCGTCGTCA | 59.968 | 55.000 | 4.84 | 0.00 | 0.00 | 4.35 |
6110 | 6505 | 0.460722 | TTTGTGGAGGTCGTCGTCAA | 59.539 | 50.000 | 4.84 | 0.00 | 0.00 | 3.18 |
6111 | 6506 | 0.031585 | TTGTGGAGGTCGTCGTCAAG | 59.968 | 55.000 | 4.84 | 0.00 | 0.00 | 3.02 |
6112 | 6507 | 0.820482 | TGTGGAGGTCGTCGTCAAGA | 60.820 | 55.000 | 4.84 | 0.00 | 0.00 | 3.02 |
6113 | 6508 | 0.109689 | GTGGAGGTCGTCGTCAAGAG | 60.110 | 60.000 | 4.84 | 0.00 | 0.00 | 2.85 |
6114 | 6509 | 1.241990 | TGGAGGTCGTCGTCAAGAGG | 61.242 | 60.000 | 4.84 | 0.00 | 36.16 | 3.69 |
6115 | 6510 | 1.153997 | GAGGTCGTCGTCAAGAGGC | 60.154 | 63.158 | 0.00 | 0.00 | 34.90 | 4.70 |
6116 | 6511 | 1.863662 | GAGGTCGTCGTCAAGAGGCA | 61.864 | 60.000 | 0.00 | 0.00 | 34.90 | 4.75 |
6117 | 6512 | 1.215647 | GGTCGTCGTCAAGAGGCAT | 59.784 | 57.895 | 0.00 | 0.00 | 34.90 | 4.40 |
6118 | 6513 | 0.802607 | GGTCGTCGTCAAGAGGCATC | 60.803 | 60.000 | 0.00 | 0.00 | 34.90 | 3.91 |
6119 | 6514 | 0.171455 | GTCGTCGTCAAGAGGCATCT | 59.829 | 55.000 | 0.00 | 0.00 | 37.39 | 2.90 |
6120 | 6515 | 0.452184 | TCGTCGTCAAGAGGCATCTC | 59.548 | 55.000 | 0.00 | 0.00 | 40.25 | 2.75 |
6121 | 6516 | 0.171231 | CGTCGTCAAGAGGCATCTCA | 59.829 | 55.000 | 0.00 | 0.00 | 42.34 | 3.27 |
6122 | 6517 | 1.202348 | CGTCGTCAAGAGGCATCTCAT | 60.202 | 52.381 | 0.00 | 0.00 | 42.34 | 2.90 |
6123 | 6518 | 2.200067 | GTCGTCAAGAGGCATCTCATG | 58.800 | 52.381 | 0.00 | 0.00 | 42.34 | 3.07 |
6124 | 6519 | 1.827344 | TCGTCAAGAGGCATCTCATGT | 59.173 | 47.619 | 0.00 | 0.00 | 42.34 | 3.21 |
6125 | 6520 | 2.159184 | TCGTCAAGAGGCATCTCATGTC | 60.159 | 50.000 | 0.00 | 0.00 | 42.34 | 3.06 |
6127 | 6522 | 3.067320 | CGTCAAGAGGCATCTCATGTCTA | 59.933 | 47.826 | 0.00 | 0.00 | 46.97 | 2.59 |
6128 | 6523 | 4.440663 | CGTCAAGAGGCATCTCATGTCTAA | 60.441 | 45.833 | 0.00 | 0.00 | 46.97 | 2.10 |
6129 | 6524 | 5.049167 | GTCAAGAGGCATCTCATGTCTAAG | 58.951 | 45.833 | 0.00 | 0.00 | 46.97 | 2.18 |
6130 | 6525 | 4.713814 | TCAAGAGGCATCTCATGTCTAAGT | 59.286 | 41.667 | 0.00 | 0.00 | 46.97 | 2.24 |
6131 | 6526 | 5.188555 | TCAAGAGGCATCTCATGTCTAAGTT | 59.811 | 40.000 | 0.00 | 0.00 | 46.97 | 2.66 |
6132 | 6527 | 5.275067 | AGAGGCATCTCATGTCTAAGTTC | 57.725 | 43.478 | 0.00 | 0.00 | 46.97 | 3.01 |
6133 | 6528 | 4.100808 | AGAGGCATCTCATGTCTAAGTTCC | 59.899 | 45.833 | 0.00 | 0.00 | 46.97 | 3.62 |
6134 | 6529 | 3.776969 | AGGCATCTCATGTCTAAGTTCCA | 59.223 | 43.478 | 0.00 | 0.00 | 44.78 | 3.53 |
6135 | 6530 | 4.411540 | AGGCATCTCATGTCTAAGTTCCAT | 59.588 | 41.667 | 0.00 | 0.00 | 44.78 | 3.41 |
6136 | 6531 | 4.514441 | GGCATCTCATGTCTAAGTTCCATG | 59.486 | 45.833 | 0.00 | 0.00 | 37.82 | 3.66 |
6137 | 6532 | 4.024218 | GCATCTCATGTCTAAGTTCCATGC | 60.024 | 45.833 | 0.00 | 0.00 | 36.70 | 4.06 |
6138 | 6533 | 4.142609 | TCTCATGTCTAAGTTCCATGCC | 57.857 | 45.455 | 0.00 | 0.00 | 36.70 | 4.40 |
6139 | 6534 | 2.868583 | CTCATGTCTAAGTTCCATGCCG | 59.131 | 50.000 | 0.00 | 0.00 | 36.70 | 5.69 |
6140 | 6535 | 1.942657 | CATGTCTAAGTTCCATGCCGG | 59.057 | 52.381 | 0.00 | 0.00 | 30.63 | 6.13 |
6141 | 6536 | 0.251916 | TGTCTAAGTTCCATGCCGGG | 59.748 | 55.000 | 2.18 | 0.00 | 34.36 | 5.73 |
6142 | 6537 | 1.095807 | GTCTAAGTTCCATGCCGGGC | 61.096 | 60.000 | 13.32 | 13.32 | 34.36 | 6.13 |
6143 | 6538 | 1.077787 | CTAAGTTCCATGCCGGGCA | 60.078 | 57.895 | 26.11 | 26.11 | 44.86 | 5.36 |
6144 | 6539 | 1.376609 | CTAAGTTCCATGCCGGGCAC | 61.377 | 60.000 | 26.48 | 11.44 | 43.04 | 5.01 |
6202 | 6597 | 4.004982 | TCGTTTTGTGGCCTAATTACTCC | 58.995 | 43.478 | 3.32 | 0.00 | 0.00 | 3.85 |
6206 | 6601 | 0.835276 | GTGGCCTAATTACTCCCCGT | 59.165 | 55.000 | 3.32 | 0.00 | 0.00 | 5.28 |
6218 | 6615 | 1.677637 | CTCCCCGTAGAGAAGTGCCC | 61.678 | 65.000 | 0.00 | 0.00 | 35.82 | 5.36 |
6219 | 6616 | 1.987855 | CCCCGTAGAGAAGTGCCCA | 60.988 | 63.158 | 0.00 | 0.00 | 0.00 | 5.36 |
6227 | 6624 | 1.623811 | AGAGAAGTGCCCATAACGTGT | 59.376 | 47.619 | 0.00 | 0.00 | 0.00 | 4.49 |
6231 | 6628 | 4.000988 | AGAAGTGCCCATAACGTGTTTAG | 58.999 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
6232 | 6629 | 2.706890 | AGTGCCCATAACGTGTTTAGG | 58.293 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
6233 | 6630 | 1.131693 | GTGCCCATAACGTGTTTAGGC | 59.868 | 52.381 | 9.28 | 9.28 | 39.41 | 3.93 |
6234 | 6631 | 0.736636 | GCCCATAACGTGTTTAGGCC | 59.263 | 55.000 | 0.00 | 0.00 | 32.68 | 5.19 |
6235 | 6632 | 1.385528 | CCCATAACGTGTTTAGGCCC | 58.614 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
6236 | 6633 | 1.064979 | CCCATAACGTGTTTAGGCCCT | 60.065 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
6237 | 6634 | 2.014128 | CCATAACGTGTTTAGGCCCTG | 58.986 | 52.381 | 0.00 | 0.00 | 0.00 | 4.45 |
6238 | 6635 | 2.617021 | CCATAACGTGTTTAGGCCCTGT | 60.617 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6239 | 6636 | 2.934886 | TAACGTGTTTAGGCCCTGTT | 57.065 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6240 | 6637 | 2.061509 | AACGTGTTTAGGCCCTGTTT | 57.938 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
6241 | 6638 | 1.314730 | ACGTGTTTAGGCCCTGTTTG | 58.685 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
6242 | 6639 | 0.596082 | CGTGTTTAGGCCCTGTTTGG | 59.404 | 55.000 | 0.00 | 0.00 | 0.00 | 3.28 |
6243 | 6640 | 1.816183 | CGTGTTTAGGCCCTGTTTGGA | 60.816 | 52.381 | 0.00 | 0.00 | 38.35 | 3.53 |
6244 | 6641 | 2.525368 | GTGTTTAGGCCCTGTTTGGAT | 58.475 | 47.619 | 0.00 | 0.00 | 38.35 | 3.41 |
6245 | 6642 | 2.897326 | GTGTTTAGGCCCTGTTTGGATT | 59.103 | 45.455 | 0.00 | 0.00 | 38.35 | 3.01 |
6246 | 6643 | 3.056821 | GTGTTTAGGCCCTGTTTGGATTC | 60.057 | 47.826 | 0.00 | 0.00 | 38.35 | 2.52 |
6247 | 6644 | 3.181423 | TGTTTAGGCCCTGTTTGGATTCT | 60.181 | 43.478 | 0.00 | 0.00 | 38.35 | 2.40 |
6248 | 6645 | 3.825908 | TTAGGCCCTGTTTGGATTCTT | 57.174 | 42.857 | 0.00 | 0.00 | 38.35 | 2.52 |
6249 | 6646 | 1.928868 | AGGCCCTGTTTGGATTCTTG | 58.071 | 50.000 | 0.00 | 0.00 | 38.35 | 3.02 |
6250 | 6647 | 1.147817 | AGGCCCTGTTTGGATTCTTGT | 59.852 | 47.619 | 0.00 | 0.00 | 38.35 | 3.16 |
6251 | 6648 | 1.970640 | GGCCCTGTTTGGATTCTTGTT | 59.029 | 47.619 | 0.00 | 0.00 | 38.35 | 2.83 |
6252 | 6649 | 2.368548 | GGCCCTGTTTGGATTCTTGTTT | 59.631 | 45.455 | 0.00 | 0.00 | 38.35 | 2.83 |
6253 | 6650 | 3.181455 | GGCCCTGTTTGGATTCTTGTTTT | 60.181 | 43.478 | 0.00 | 0.00 | 38.35 | 2.43 |
6254 | 6651 | 4.450976 | GCCCTGTTTGGATTCTTGTTTTT | 58.549 | 39.130 | 0.00 | 0.00 | 38.35 | 1.94 |
6255 | 6652 | 4.511454 | GCCCTGTTTGGATTCTTGTTTTTC | 59.489 | 41.667 | 0.00 | 0.00 | 38.35 | 2.29 |
6256 | 6653 | 5.684813 | GCCCTGTTTGGATTCTTGTTTTTCT | 60.685 | 40.000 | 0.00 | 0.00 | 38.35 | 2.52 |
6257 | 6654 | 6.348498 | CCCTGTTTGGATTCTTGTTTTTCTT | 58.652 | 36.000 | 0.00 | 0.00 | 38.35 | 2.52 |
6258 | 6655 | 6.823182 | CCCTGTTTGGATTCTTGTTTTTCTTT | 59.177 | 34.615 | 0.00 | 0.00 | 38.35 | 2.52 |
6259 | 6656 | 7.011389 | CCCTGTTTGGATTCTTGTTTTTCTTTC | 59.989 | 37.037 | 0.00 | 0.00 | 38.35 | 2.62 |
6260 | 6657 | 7.765819 | CCTGTTTGGATTCTTGTTTTTCTTTCT | 59.234 | 33.333 | 0.00 | 0.00 | 38.35 | 2.52 |
6261 | 6658 | 9.801873 | CTGTTTGGATTCTTGTTTTTCTTTCTA | 57.198 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
6283 | 6680 | 4.957759 | AATACACTTGTATTTCCGCCAC | 57.042 | 40.909 | 8.54 | 0.00 | 45.90 | 5.01 |
6284 | 6681 | 1.530323 | ACACTTGTATTTCCGCCACC | 58.470 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
6285 | 6682 | 0.808755 | CACTTGTATTTCCGCCACCC | 59.191 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
6286 | 6683 | 0.402504 | ACTTGTATTTCCGCCACCCA | 59.597 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
6287 | 6684 | 1.094785 | CTTGTATTTCCGCCACCCAG | 58.905 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
6288 | 6685 | 0.693622 | TTGTATTTCCGCCACCCAGA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
6289 | 6686 | 0.693622 | TGTATTTCCGCCACCCAGAA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
6290 | 6687 | 1.339631 | TGTATTTCCGCCACCCAGAAG | 60.340 | 52.381 | 0.00 | 0.00 | 0.00 | 2.85 |
6291 | 6688 | 0.988832 | TATTTCCGCCACCCAGAAGT | 59.011 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
6292 | 6689 | 0.112412 | ATTTCCGCCACCCAGAAGTT | 59.888 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
6293 | 6690 | 0.766131 | TTTCCGCCACCCAGAAGTTA | 59.234 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
6294 | 6691 | 0.766131 | TTCCGCCACCCAGAAGTTAA | 59.234 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
6295 | 6692 | 0.766131 | TCCGCCACCCAGAAGTTAAA | 59.234 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
6296 | 6693 | 1.143277 | TCCGCCACCCAGAAGTTAAAA | 59.857 | 47.619 | 0.00 | 0.00 | 0.00 | 1.52 |
6297 | 6694 | 2.167662 | CCGCCACCCAGAAGTTAAAAT | 58.832 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
6298 | 6695 | 3.009253 | TCCGCCACCCAGAAGTTAAAATA | 59.991 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
6299 | 6696 | 3.128068 | CCGCCACCCAGAAGTTAAAATAC | 59.872 | 47.826 | 0.00 | 0.00 | 0.00 | 1.89 |
6300 | 6697 | 3.754323 | CGCCACCCAGAAGTTAAAATACA | 59.246 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
6301 | 6698 | 4.379082 | CGCCACCCAGAAGTTAAAATACAC | 60.379 | 45.833 | 0.00 | 0.00 | 0.00 | 2.90 |
6302 | 6699 | 4.082408 | GCCACCCAGAAGTTAAAATACACC | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 4.16 |
6303 | 6700 | 5.321927 | CCACCCAGAAGTTAAAATACACCT | 58.678 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
6304 | 6701 | 5.183140 | CCACCCAGAAGTTAAAATACACCTG | 59.817 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6305 | 6702 | 5.768164 | CACCCAGAAGTTAAAATACACCTGT | 59.232 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6306 | 6703 | 6.938030 | CACCCAGAAGTTAAAATACACCTGTA | 59.062 | 38.462 | 0.00 | 0.00 | 34.67 | 2.74 |
6307 | 6704 | 7.610305 | CACCCAGAAGTTAAAATACACCTGTAT | 59.390 | 37.037 | 0.00 | 0.00 | 42.60 | 2.29 |
6309 | 6706 | 8.458843 | CCCAGAAGTTAAAATACACCTGTATTG | 58.541 | 37.037 | 10.73 | 0.00 | 46.98 | 1.90 |
6310 | 6707 | 9.226606 | CCAGAAGTTAAAATACACCTGTATTGA | 57.773 | 33.333 | 10.73 | 1.47 | 46.98 | 2.57 |
6319 | 6716 | 7.875327 | AATACACCTGTATTGAATTACCACC | 57.125 | 36.000 | 9.44 | 0.00 | 46.20 | 4.61 |
6320 | 6717 | 5.249780 | ACACCTGTATTGAATTACCACCA | 57.750 | 39.130 | 0.00 | 0.00 | 0.00 | 4.17 |
6321 | 6718 | 5.826643 | ACACCTGTATTGAATTACCACCAT | 58.173 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
6322 | 6719 | 6.252995 | ACACCTGTATTGAATTACCACCATT | 58.747 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6323 | 6720 | 7.406916 | ACACCTGTATTGAATTACCACCATTA | 58.593 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
6324 | 6721 | 7.338449 | ACACCTGTATTGAATTACCACCATTAC | 59.662 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
6325 | 6722 | 6.831868 | ACCTGTATTGAATTACCACCATTACC | 59.168 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
6326 | 6723 | 6.831353 | CCTGTATTGAATTACCACCATTACCA | 59.169 | 38.462 | 0.00 | 0.00 | 0.00 | 3.25 |
6327 | 6724 | 7.201785 | CCTGTATTGAATTACCACCATTACCAC | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 4.16 |
6328 | 6725 | 6.603997 | TGTATTGAATTACCACCATTACCACC | 59.396 | 38.462 | 0.00 | 0.00 | 0.00 | 4.61 |
6329 | 6726 | 4.659529 | TGAATTACCACCATTACCACCA | 57.340 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
6330 | 6727 | 5.199982 | TGAATTACCACCATTACCACCAT | 57.800 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
6331 | 6728 | 6.328782 | TGAATTACCACCATTACCACCATA | 57.671 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
6332 | 6729 | 6.123651 | TGAATTACCACCATTACCACCATAC | 58.876 | 40.000 | 0.00 | 0.00 | 0.00 | 2.39 |
6333 | 6730 | 4.506937 | TTACCACCATTACCACCATACC | 57.493 | 45.455 | 0.00 | 0.00 | 0.00 | 2.73 |
6334 | 6731 | 2.280103 | ACCACCATTACCACCATACCA | 58.720 | 47.619 | 0.00 | 0.00 | 0.00 | 3.25 |
6335 | 6732 | 2.650322 | ACCACCATTACCACCATACCAA | 59.350 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
6336 | 6733 | 3.287222 | CCACCATTACCACCATACCAAG | 58.713 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
6337 | 6734 | 2.687935 | CACCATTACCACCATACCAAGC | 59.312 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
6338 | 6735 | 1.946768 | CCATTACCACCATACCAAGCG | 59.053 | 52.381 | 0.00 | 0.00 | 0.00 | 4.68 |
6339 | 6736 | 1.333619 | CATTACCACCATACCAAGCGC | 59.666 | 52.381 | 0.00 | 0.00 | 0.00 | 5.92 |
6340 | 6737 | 0.741574 | TTACCACCATACCAAGCGCG | 60.742 | 55.000 | 0.00 | 0.00 | 0.00 | 6.86 |
6341 | 6738 | 2.581208 | TACCACCATACCAAGCGCGG | 62.581 | 60.000 | 8.83 | 0.00 | 0.00 | 6.46 |
6342 | 6739 | 3.876198 | CACCATACCAAGCGCGGC | 61.876 | 66.667 | 8.83 | 0.00 | 0.00 | 6.53 |
6344 | 6741 | 4.856801 | CCATACCAAGCGCGGCCT | 62.857 | 66.667 | 8.83 | 0.00 | 0.00 | 5.19 |
6345 | 6742 | 2.824041 | CATACCAAGCGCGGCCTT | 60.824 | 61.111 | 8.83 | 0.00 | 0.00 | 4.35 |
6346 | 6743 | 1.522806 | CATACCAAGCGCGGCCTTA | 60.523 | 57.895 | 8.83 | 0.00 | 0.00 | 2.69 |
6347 | 6744 | 1.227556 | ATACCAAGCGCGGCCTTAG | 60.228 | 57.895 | 8.83 | 0.00 | 0.00 | 2.18 |
6348 | 6745 | 1.682451 | ATACCAAGCGCGGCCTTAGA | 61.682 | 55.000 | 8.83 | 0.00 | 0.00 | 2.10 |
6349 | 6746 | 2.292794 | TACCAAGCGCGGCCTTAGAG | 62.293 | 60.000 | 8.83 | 0.00 | 0.00 | 2.43 |
6350 | 6747 | 2.184322 | CAAGCGCGGCCTTAGAGA | 59.816 | 61.111 | 8.83 | 0.00 | 0.00 | 3.10 |
6351 | 6748 | 2.167861 | CAAGCGCGGCCTTAGAGAC | 61.168 | 63.158 | 8.83 | 0.00 | 0.00 | 3.36 |
6352 | 6749 | 2.352032 | AAGCGCGGCCTTAGAGACT | 61.352 | 57.895 | 8.83 | 0.00 | 0.00 | 3.24 |
6353 | 6750 | 1.889530 | AAGCGCGGCCTTAGAGACTT | 61.890 | 55.000 | 8.83 | 0.00 | 0.00 | 3.01 |
6354 | 6751 | 1.878975 | GCGCGGCCTTAGAGACTTC | 60.879 | 63.158 | 8.83 | 0.00 | 0.00 | 3.01 |
6355 | 6752 | 1.586564 | CGCGGCCTTAGAGACTTCG | 60.587 | 63.158 | 0.00 | 0.00 | 0.00 | 3.79 |
6356 | 6753 | 1.878975 | GCGGCCTTAGAGACTTCGC | 60.879 | 63.158 | 0.00 | 0.00 | 35.12 | 4.70 |
6357 | 6754 | 1.511305 | CGGCCTTAGAGACTTCGCA | 59.489 | 57.895 | 0.00 | 0.00 | 0.00 | 5.10 |
6358 | 6755 | 0.108804 | CGGCCTTAGAGACTTCGCAA | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6359 | 6756 | 1.671850 | CGGCCTTAGAGACTTCGCAAA | 60.672 | 52.381 | 0.00 | 0.00 | 0.00 | 3.68 |
6360 | 6757 | 2.633488 | GGCCTTAGAGACTTCGCAAAT | 58.367 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
6361 | 6758 | 3.010420 | GGCCTTAGAGACTTCGCAAATT | 58.990 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
6362 | 6759 | 3.181506 | GGCCTTAGAGACTTCGCAAATTG | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 2.32 |
6363 | 6760 | 3.684788 | GCCTTAGAGACTTCGCAAATTGA | 59.315 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
6364 | 6761 | 4.333926 | GCCTTAGAGACTTCGCAAATTGAT | 59.666 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
6365 | 6762 | 5.523916 | GCCTTAGAGACTTCGCAAATTGATA | 59.476 | 40.000 | 0.00 | 0.00 | 0.00 | 2.15 |
6366 | 6763 | 6.292596 | GCCTTAGAGACTTCGCAAATTGATAG | 60.293 | 42.308 | 0.00 | 0.00 | 0.00 | 2.08 |
6367 | 6764 | 6.980978 | CCTTAGAGACTTCGCAAATTGATAGA | 59.019 | 38.462 | 0.00 | 0.00 | 0.00 | 1.98 |
6368 | 6765 | 7.655328 | CCTTAGAGACTTCGCAAATTGATAGAT | 59.345 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
6369 | 6766 | 8.581057 | TTAGAGACTTCGCAAATTGATAGATC | 57.419 | 34.615 | 0.00 | 0.00 | 0.00 | 2.75 |
6370 | 6767 | 6.815089 | AGAGACTTCGCAAATTGATAGATCT | 58.185 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
6 | 7 | 1.207089 | GTGAACCTCGTCATCCATGGA | 59.793 | 52.381 | 18.88 | 18.88 | 0.00 | 3.41 |
32 | 33 | 1.522258 | CAAGAAAAATGTGTGTGCGCC | 59.478 | 47.619 | 4.18 | 0.00 | 0.00 | 6.53 |
34 | 35 | 5.034152 | AGTAACAAGAAAAATGTGTGTGCG | 58.966 | 37.500 | 0.00 | 0.00 | 0.00 | 5.34 |
62 | 63 | 7.259088 | AGAGAAACCCTAGCTATTCTTTCAA | 57.741 | 36.000 | 8.38 | 0.00 | 32.54 | 2.69 |
63 | 64 | 6.875972 | AGAGAAACCCTAGCTATTCTTTCA | 57.124 | 37.500 | 8.38 | 0.00 | 32.54 | 2.69 |
64 | 65 | 8.479689 | AGTTAGAGAAACCCTAGCTATTCTTTC | 58.520 | 37.037 | 8.38 | 8.30 | 39.03 | 2.62 |
67 | 68 | 7.981475 | AAGTTAGAGAAACCCTAGCTATTCT | 57.019 | 36.000 | 6.97 | 6.97 | 39.03 | 2.40 |
74 | 84 | 8.033626 | ACGTGATTTAAGTTAGAGAAACCCTAG | 58.966 | 37.037 | 0.00 | 0.00 | 39.03 | 3.02 |
292 | 314 | 7.618502 | TTCTTAGCGCAATATTCTTTTACCA | 57.381 | 32.000 | 11.47 | 0.00 | 0.00 | 3.25 |
363 | 387 | 6.884836 | GGGTTATTTTTCTTCTCTCTTGCCTA | 59.115 | 38.462 | 0.00 | 0.00 | 0.00 | 3.93 |
370 | 394 | 5.524281 | CGCCTAGGGTTATTTTTCTTCTCTC | 59.476 | 44.000 | 11.72 | 0.00 | 0.00 | 3.20 |
440 | 479 | 3.808728 | CAGGGAGATATTTTCGGCAAGA | 58.191 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
487 | 526 | 6.378710 | ACACAAGAAAGAAAGAGGTAAAGC | 57.621 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
689 | 730 | 2.761195 | CGAGATCTCACGGGTGCGA | 61.761 | 63.158 | 22.31 | 0.00 | 0.00 | 5.10 |
701 | 742 | 3.242316 | GGCACGGTTTGAAATACGAGATC | 60.242 | 47.826 | 10.98 | 0.00 | 0.00 | 2.75 |
705 | 746 | 1.158434 | GGGCACGGTTTGAAATACGA | 58.842 | 50.000 | 10.98 | 0.00 | 0.00 | 3.43 |
706 | 747 | 0.169451 | GGGGCACGGTTTGAAATACG | 59.831 | 55.000 | 3.95 | 3.95 | 0.00 | 3.06 |
798 | 840 | 2.682876 | TTCGTGCCCGGCGATTTTC | 61.683 | 57.895 | 9.30 | 0.00 | 38.21 | 2.29 |
836 | 878 | 3.762407 | TGCCTAATTATAGCAGCGGAA | 57.238 | 42.857 | 6.29 | 0.00 | 0.00 | 4.30 |
929 | 975 | 2.822215 | GGATACCAAGGCGAGGAGA | 58.178 | 57.895 | 5.26 | 0.00 | 0.00 | 3.71 |
991 | 1045 | 2.507102 | CGTCGACATTGGCGCTCT | 60.507 | 61.111 | 17.16 | 0.00 | 0.00 | 4.09 |
992 | 1046 | 3.554692 | CCGTCGACATTGGCGCTC | 61.555 | 66.667 | 17.16 | 1.93 | 0.00 | 5.03 |
1113 | 1187 | 3.264845 | GGGCAAGGTGAGGGGGAA | 61.265 | 66.667 | 0.00 | 0.00 | 0.00 | 3.97 |
1129 | 1203 | 2.818921 | TGGATCAAAACATGAAGGGGG | 58.181 | 47.619 | 0.00 | 0.00 | 42.54 | 5.40 |
1132 | 1206 | 5.080969 | AGCAATGGATCAAAACATGAAGG | 57.919 | 39.130 | 0.00 | 0.00 | 42.54 | 3.46 |
1134 | 1208 | 4.735985 | CGAGCAATGGATCAAAACATGAA | 58.264 | 39.130 | 0.00 | 0.00 | 42.54 | 2.57 |
1165 | 1239 | 2.075489 | GCGTACGGATCGATCAGCG | 61.075 | 63.158 | 25.93 | 21.91 | 42.69 | 5.18 |
1167 | 1241 | 2.075489 | GCGCGTACGGATCGATCAG | 61.075 | 63.158 | 25.93 | 23.83 | 40.57 | 2.90 |
1198 | 1273 | 1.209898 | GCTAGCGCACAATGCACAA | 59.790 | 52.632 | 11.47 | 0.00 | 45.36 | 3.33 |
1199 | 1274 | 1.672030 | AGCTAGCGCACAATGCACA | 60.672 | 52.632 | 11.47 | 0.00 | 45.36 | 4.57 |
1272 | 1350 | 7.201530 | CGCGGAACTACAGATTAAGAAAATCTT | 60.202 | 37.037 | 0.00 | 0.00 | 40.35 | 2.40 |
1338 | 1426 | 3.450578 | GTTATCACCGGAGCAATTCGTA | 58.549 | 45.455 | 9.46 | 0.00 | 0.00 | 3.43 |
1357 | 1445 | 2.162681 | GCAGTAATGGAGTTGCTGGTT | 58.837 | 47.619 | 7.74 | 0.00 | 46.74 | 3.67 |
1384 | 1472 | 2.032030 | AGGACAAAAGCGAAACGTCATG | 60.032 | 45.455 | 0.00 | 0.00 | 0.00 | 3.07 |
1389 | 1477 | 2.108700 | CACAAGGACAAAAGCGAAACG | 58.891 | 47.619 | 0.00 | 0.00 | 0.00 | 3.60 |
1500 | 1599 | 8.944212 | ATCTTGCAAGTTACAACGTAATTAAC | 57.056 | 30.769 | 25.19 | 0.00 | 0.00 | 2.01 |
1508 | 1607 | 4.378459 | GGAAGGATCTTGCAAGTTACAACG | 60.378 | 45.833 | 25.19 | 0.00 | 0.00 | 4.10 |
1570 | 1669 | 3.491964 | CCGGATGCCAAGAACGACTTATA | 60.492 | 47.826 | 0.00 | 0.00 | 37.03 | 0.98 |
1571 | 1670 | 2.550978 | CGGATGCCAAGAACGACTTAT | 58.449 | 47.619 | 0.00 | 0.00 | 37.03 | 1.73 |
1589 | 1688 | 5.772521 | ACTTCAAAATCACAGAATTTCCGG | 58.227 | 37.500 | 0.00 | 0.00 | 0.00 | 5.14 |
1656 | 1758 | 2.093306 | TATTGTCTGTGTTGGCCTCG | 57.907 | 50.000 | 3.32 | 0.00 | 0.00 | 4.63 |
1719 | 1821 | 4.986054 | ATACCCAACTCCACTTGTTACA | 57.014 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
1765 | 1867 | 2.224992 | TGTATCCACATGGGCAACAGTT | 60.225 | 45.455 | 0.00 | 0.00 | 36.21 | 3.16 |
1803 | 1905 | 9.840427 | CAAATCACGTTTTCAGGTAAATCTTAT | 57.160 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
1833 | 1935 | 9.251440 | AGACTAAACATACTGTACTCCAACATA | 57.749 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
1942 | 2044 | 4.396790 | TGCAGGTAAAAATGGACGGATTAC | 59.603 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
1973 | 2075 | 6.938698 | TTAGTAATAGGTTCCAGTGGTGAA | 57.061 | 37.500 | 9.54 | 0.00 | 0.00 | 3.18 |
2128 | 2231 | 7.110155 | AGTGTCAAGGGTACTGGTATAAAATG | 58.890 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
2137 | 2240 | 6.238648 | AGAAATAAAGTGTCAAGGGTACTGG | 58.761 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2141 | 2244 | 7.229907 | GGTTGAAGAAATAAAGTGTCAAGGGTA | 59.770 | 37.037 | 0.00 | 0.00 | 0.00 | 3.69 |
2873 | 2986 | 6.994421 | ATTTGATCAAGGTTTAGTTTGGGT | 57.006 | 33.333 | 8.41 | 0.00 | 0.00 | 4.51 |
2905 | 3018 | 4.848357 | AGGTATGTTAAACAGAGCAGCAT | 58.152 | 39.130 | 0.00 | 0.00 | 39.97 | 3.79 |
2967 | 3080 | 4.345859 | TTGTCAGTACGACTGGGAAAAT | 57.654 | 40.909 | 15.47 | 0.00 | 45.94 | 1.82 |
2976 | 3089 | 2.928116 | GGGCATAGTTTGTCAGTACGAC | 59.072 | 50.000 | 9.87 | 9.87 | 45.61 | 4.34 |
3693 | 3811 | 1.338107 | ATCAGACACCTTCACGACCA | 58.662 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3844 | 3962 | 4.598022 | TGATTTGTTATGGATGCAGACCA | 58.402 | 39.130 | 15.98 | 15.98 | 41.83 | 4.02 |
4050 | 4168 | 6.714356 | TGTTGAAATATCTGACATGGTGAACA | 59.286 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
4054 | 4172 | 8.245491 | TCAAATGTTGAAATATCTGACATGGTG | 58.755 | 33.333 | 0.00 | 0.00 | 36.59 | 4.17 |
4204 | 4324 | 6.434340 | GGGGACAGAAGAATTGTTATCAAACT | 59.566 | 38.462 | 0.00 | 0.00 | 37.11 | 2.66 |
4208 | 4328 | 4.540099 | AGGGGGACAGAAGAATTGTTATCA | 59.460 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
4212 | 4332 | 5.970640 | TCTATAGGGGGACAGAAGAATTGTT | 59.029 | 40.000 | 0.00 | 0.00 | 0.00 | 2.83 |
4214 | 4334 | 6.327626 | TCTTCTATAGGGGGACAGAAGAATTG | 59.672 | 42.308 | 9.76 | 0.00 | 46.10 | 2.32 |
4298 | 4422 | 4.898829 | TGCCGGAAAATCATGAAGTATG | 57.101 | 40.909 | 5.05 | 0.00 | 38.17 | 2.39 |
4367 | 4491 | 3.316308 | CCCGGAAGATTGAATCAACATCC | 59.684 | 47.826 | 0.73 | 5.72 | 0.00 | 3.51 |
4719 | 4843 | 3.727419 | GCAACCTGATGCATGGAAC | 57.273 | 52.632 | 2.46 | 0.00 | 45.70 | 3.62 |
4738 | 4862 | 0.741221 | GGTAAGCTCCCTCTTGTGCG | 60.741 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
4923 | 5047 | 6.397272 | TGGCACTTGATGATAACAAAAATCC | 58.603 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4931 | 5055 | 5.648092 | ACCTTTACTGGCACTTGATGATAAC | 59.352 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
4971 | 5095 | 3.375610 | TCAGCGACTCTCTGTCTGTAATC | 59.624 | 47.826 | 0.00 | 0.00 | 43.25 | 1.75 |
4972 | 5096 | 3.348119 | TCAGCGACTCTCTGTCTGTAAT | 58.652 | 45.455 | 0.00 | 0.00 | 43.25 | 1.89 |
4973 | 5097 | 2.779506 | TCAGCGACTCTCTGTCTGTAA | 58.220 | 47.619 | 0.00 | 0.00 | 43.25 | 2.41 |
4974 | 5098 | 2.474410 | TCAGCGACTCTCTGTCTGTA | 57.526 | 50.000 | 0.00 | 0.00 | 43.25 | 2.74 |
4976 | 5100 | 2.922387 | CAAATCAGCGACTCTCTGTCTG | 59.078 | 50.000 | 0.00 | 0.00 | 43.25 | 3.51 |
4977 | 5101 | 2.560542 | ACAAATCAGCGACTCTCTGTCT | 59.439 | 45.455 | 0.00 | 0.00 | 43.25 | 3.41 |
4978 | 5102 | 2.953020 | ACAAATCAGCGACTCTCTGTC | 58.047 | 47.619 | 0.00 | 0.00 | 42.06 | 3.51 |
4979 | 5103 | 3.062763 | CAACAAATCAGCGACTCTCTGT | 58.937 | 45.455 | 0.00 | 0.00 | 33.48 | 3.41 |
4982 | 5131 | 3.059884 | TGACAACAAATCAGCGACTCTC | 58.940 | 45.455 | 0.00 | 0.00 | 0.00 | 3.20 |
5043 | 5192 | 4.644234 | CCTGTACATGTGCAATTTGGGATA | 59.356 | 41.667 | 17.61 | 0.00 | 0.00 | 2.59 |
5229 | 5378 | 1.404391 | CCAGCATCCAATCAGTGCTTC | 59.596 | 52.381 | 0.00 | 0.00 | 46.29 | 3.86 |
5456 | 5616 | 4.206375 | TGAGCTCTCAAAATTGTGGAACA | 58.794 | 39.130 | 16.19 | 0.00 | 40.51 | 3.18 |
5531 | 5691 | 6.109156 | TGTTCGGCATATCATACCAATAGT | 57.891 | 37.500 | 0.00 | 0.00 | 0.00 | 2.12 |
5532 | 5692 | 6.401047 | CGTTGTTCGGCATATCATACCAATAG | 60.401 | 42.308 | 0.00 | 0.00 | 35.71 | 1.73 |
5533 | 5693 | 5.407084 | CGTTGTTCGGCATATCATACCAATA | 59.593 | 40.000 | 0.00 | 0.00 | 35.71 | 1.90 |
5534 | 5694 | 4.213270 | CGTTGTTCGGCATATCATACCAAT | 59.787 | 41.667 | 0.00 | 0.00 | 35.71 | 3.16 |
5535 | 5695 | 3.558006 | CGTTGTTCGGCATATCATACCAA | 59.442 | 43.478 | 0.00 | 0.00 | 35.71 | 3.67 |
5537 | 5697 | 3.788434 | CGTTGTTCGGCATATCATACC | 57.212 | 47.619 | 0.00 | 0.00 | 35.71 | 2.73 |
5649 | 5813 | 8.432110 | TGCAAGAAGAGCAAATATTCGTAATA | 57.568 | 30.769 | 0.00 | 0.00 | 39.39 | 0.98 |
5672 | 5836 | 7.441017 | AGGAATCTAGACTTGTATTCTCATGC | 58.559 | 38.462 | 0.00 | 0.00 | 0.00 | 4.06 |
5684 | 5848 | 7.740805 | AGACAAACAAAGAGGAATCTAGACTT | 58.259 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
5705 | 5869 | 4.709397 | ACCCAAGTTTCATTTCACAAGACA | 59.291 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
5707 | 5871 | 4.036262 | CGACCCAAGTTTCATTTCACAAGA | 59.964 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
5708 | 5872 | 4.290155 | CGACCCAAGTTTCATTTCACAAG | 58.710 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
5730 | 5907 | 4.235762 | TCCCTATTCAGCGGCCGC | 62.236 | 66.667 | 42.34 | 42.34 | 42.33 | 6.53 |
5759 | 5936 | 2.115427 | TCGGGCACAAGATGAGGAATA | 58.885 | 47.619 | 0.00 | 0.00 | 0.00 | 1.75 |
5760 | 5937 | 0.911769 | TCGGGCACAAGATGAGGAAT | 59.088 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5762 | 5939 | 0.911769 | AATCGGGCACAAGATGAGGA | 59.088 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
5763 | 5940 | 1.402968 | CAAATCGGGCACAAGATGAGG | 59.597 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
5764 | 5941 | 2.358957 | TCAAATCGGGCACAAGATGAG | 58.641 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
5765 | 5942 | 2.488204 | TCAAATCGGGCACAAGATGA | 57.512 | 45.000 | 0.00 | 0.00 | 0.00 | 2.92 |
5766 | 5943 | 2.684374 | TCATCAAATCGGGCACAAGATG | 59.316 | 45.455 | 0.00 | 0.00 | 34.30 | 2.90 |
5767 | 5944 | 3.003394 | TCATCAAATCGGGCACAAGAT | 57.997 | 42.857 | 0.00 | 0.00 | 0.00 | 2.40 |
5859 | 6037 | 2.512515 | GATGCTCAGGCCGTCCAC | 60.513 | 66.667 | 0.00 | 0.00 | 37.74 | 4.02 |
5861 | 6039 | 3.453070 | GAGGATGCTCAGGCCGTCC | 62.453 | 68.421 | 9.69 | 0.00 | 40.37 | 4.79 |
5862 | 6040 | 2.107953 | GAGGATGCTCAGGCCGTC | 59.892 | 66.667 | 9.69 | 0.00 | 37.74 | 4.79 |
5863 | 6041 | 3.842923 | CGAGGATGCTCAGGCCGT | 61.843 | 66.667 | 15.10 | 0.00 | 37.74 | 5.68 |
5864 | 6042 | 3.842923 | ACGAGGATGCTCAGGCCG | 61.843 | 66.667 | 15.10 | 2.83 | 37.74 | 6.13 |
5873 | 6051 | 3.791539 | GCACTGAGCACGAGGATG | 58.208 | 61.111 | 0.00 | 0.00 | 44.79 | 3.51 |
5902 | 6297 | 2.095252 | GGCCACGCGAGAAGAGTTC | 61.095 | 63.158 | 15.93 | 0.00 | 0.00 | 3.01 |
5903 | 6298 | 2.048127 | GGCCACGCGAGAAGAGTT | 60.048 | 61.111 | 15.93 | 0.00 | 0.00 | 3.01 |
5914 | 6309 | 2.125350 | GAGAGCAAGGAGGCCACG | 60.125 | 66.667 | 5.01 | 0.00 | 0.00 | 4.94 |
5933 | 6328 | 0.392998 | ATGACTGATGTGGCCGTTCC | 60.393 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
5935 | 6330 | 1.308069 | GCATGACTGATGTGGCCGTT | 61.308 | 55.000 | 0.00 | 0.00 | 34.14 | 4.44 |
5937 | 6332 | 2.475466 | GGCATGACTGATGTGGCCG | 61.475 | 63.158 | 0.00 | 0.00 | 34.14 | 6.13 |
5938 | 6333 | 2.475466 | CGGCATGACTGATGTGGCC | 61.475 | 63.158 | 0.00 | 0.00 | 38.04 | 5.36 |
5939 | 6334 | 3.104766 | CGGCATGACTGATGTGGC | 58.895 | 61.111 | 0.00 | 0.00 | 34.14 | 5.01 |
5940 | 6335 | 2.816360 | CGCGGCATGACTGATGTGG | 61.816 | 63.158 | 0.00 | 0.00 | 34.14 | 4.17 |
5941 | 6336 | 2.705220 | CGCGGCATGACTGATGTG | 59.295 | 61.111 | 0.00 | 0.00 | 34.14 | 3.21 |
5942 | 6337 | 2.512286 | CCGCGGCATGACTGATGT | 60.512 | 61.111 | 14.67 | 0.00 | 34.14 | 3.06 |
5943 | 6338 | 2.512286 | ACCGCGGCATGACTGATG | 60.512 | 61.111 | 28.58 | 0.00 | 34.84 | 3.07 |
5944 | 6339 | 2.202932 | GACCGCGGCATGACTGAT | 60.203 | 61.111 | 28.58 | 0.57 | 0.00 | 2.90 |
5945 | 6340 | 4.794439 | CGACCGCGGCATGACTGA | 62.794 | 66.667 | 28.58 | 0.00 | 0.00 | 3.41 |
5996 | 6391 | 2.399611 | GGCAACTACACGCGATGC | 59.600 | 61.111 | 15.93 | 12.71 | 36.31 | 3.91 |
6042 | 6437 | 4.831307 | ATCGCGACGCACCGAGAC | 62.831 | 66.667 | 21.35 | 0.00 | 40.80 | 3.36 |
6043 | 6438 | 4.829518 | CATCGCGACGCACCGAGA | 62.830 | 66.667 | 21.35 | 8.78 | 42.05 | 4.04 |
6049 | 6444 | 3.124270 | AAATGGCATCGCGACGCA | 61.124 | 55.556 | 29.30 | 15.21 | 0.00 | 5.24 |
6050 | 6445 | 2.648724 | CAAATGGCATCGCGACGC | 60.649 | 61.111 | 20.43 | 20.43 | 0.00 | 5.19 |
6053 | 6448 | 1.093972 | ATCAACAAATGGCATCGCGA | 58.906 | 45.000 | 13.09 | 13.09 | 0.00 | 5.87 |
6054 | 6449 | 1.193644 | CATCAACAAATGGCATCGCG | 58.806 | 50.000 | 0.00 | 0.00 | 0.00 | 5.87 |
6055 | 6450 | 1.563111 | CCATCAACAAATGGCATCGC | 58.437 | 50.000 | 0.00 | 0.00 | 39.84 | 4.58 |
6062 | 6457 | 2.532235 | CGACCATGCCATCAACAAATG | 58.468 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
6063 | 6458 | 1.135024 | GCGACCATGCCATCAACAAAT | 60.135 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
6064 | 6459 | 0.243365 | GCGACCATGCCATCAACAAA | 59.757 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
6065 | 6460 | 0.892814 | TGCGACCATGCCATCAACAA | 60.893 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
6066 | 6461 | 1.303155 | TGCGACCATGCCATCAACA | 60.303 | 52.632 | 0.00 | 0.00 | 0.00 | 3.33 |
6067 | 6462 | 1.430632 | CTGCGACCATGCCATCAAC | 59.569 | 57.895 | 0.00 | 0.00 | 0.00 | 3.18 |
6068 | 6463 | 2.409055 | GCTGCGACCATGCCATCAA | 61.409 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
6069 | 6464 | 2.825387 | GCTGCGACCATGCCATCA | 60.825 | 61.111 | 0.00 | 0.00 | 0.00 | 3.07 |
6070 | 6465 | 1.731433 | AATGCTGCGACCATGCCATC | 61.731 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
6071 | 6466 | 1.731433 | GAATGCTGCGACCATGCCAT | 61.731 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6072 | 6467 | 2.361483 | AATGCTGCGACCATGCCA | 60.361 | 55.556 | 0.00 | 0.00 | 0.00 | 4.92 |
6073 | 6468 | 1.660560 | AAGAATGCTGCGACCATGCC | 61.661 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6074 | 6469 | 0.171903 | AAAGAATGCTGCGACCATGC | 59.828 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
6075 | 6470 | 1.200716 | ACAAAGAATGCTGCGACCATG | 59.799 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
6076 | 6471 | 1.200716 | CACAAAGAATGCTGCGACCAT | 59.799 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
6077 | 6472 | 0.592637 | CACAAAGAATGCTGCGACCA | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
6078 | 6473 | 0.109597 | CCACAAAGAATGCTGCGACC | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
6079 | 6474 | 0.874390 | TCCACAAAGAATGCTGCGAC | 59.126 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
6080 | 6475 | 1.159285 | CTCCACAAAGAATGCTGCGA | 58.841 | 50.000 | 0.00 | 0.00 | 0.00 | 5.10 |
6081 | 6476 | 0.169672 | CCTCCACAAAGAATGCTGCG | 59.830 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
6082 | 6477 | 1.200948 | GACCTCCACAAAGAATGCTGC | 59.799 | 52.381 | 0.00 | 0.00 | 0.00 | 5.25 |
6083 | 6478 | 1.466167 | CGACCTCCACAAAGAATGCTG | 59.534 | 52.381 | 0.00 | 0.00 | 0.00 | 4.41 |
6084 | 6479 | 1.072331 | ACGACCTCCACAAAGAATGCT | 59.928 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 |
6085 | 6480 | 1.464997 | GACGACCTCCACAAAGAATGC | 59.535 | 52.381 | 0.00 | 0.00 | 0.00 | 3.56 |
6086 | 6481 | 1.726791 | CGACGACCTCCACAAAGAATG | 59.273 | 52.381 | 0.00 | 0.00 | 0.00 | 2.67 |
6087 | 6482 | 1.343465 | ACGACGACCTCCACAAAGAAT | 59.657 | 47.619 | 0.00 | 0.00 | 0.00 | 2.40 |
6088 | 6483 | 0.748450 | ACGACGACCTCCACAAAGAA | 59.252 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
6089 | 6484 | 0.313043 | GACGACGACCTCCACAAAGA | 59.687 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
6090 | 6485 | 0.031585 | TGACGACGACCTCCACAAAG | 59.968 | 55.000 | 0.00 | 0.00 | 0.00 | 2.77 |
6091 | 6486 | 0.460722 | TTGACGACGACCTCCACAAA | 59.539 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
6092 | 6487 | 0.031585 | CTTGACGACGACCTCCACAA | 59.968 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
6093 | 6488 | 0.820482 | TCTTGACGACGACCTCCACA | 60.820 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
6094 | 6489 | 0.109689 | CTCTTGACGACGACCTCCAC | 60.110 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
6095 | 6490 | 1.241990 | CCTCTTGACGACGACCTCCA | 61.242 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
6096 | 6491 | 1.507174 | CCTCTTGACGACGACCTCC | 59.493 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
6097 | 6492 | 1.153997 | GCCTCTTGACGACGACCTC | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
6098 | 6493 | 1.251527 | ATGCCTCTTGACGACGACCT | 61.252 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
6099 | 6494 | 0.802607 | GATGCCTCTTGACGACGACC | 60.803 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
6100 | 6495 | 0.171455 | AGATGCCTCTTGACGACGAC | 59.829 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
6101 | 6496 | 0.452184 | GAGATGCCTCTTGACGACGA | 59.548 | 55.000 | 0.00 | 0.00 | 36.50 | 4.20 |
6102 | 6497 | 0.171231 | TGAGATGCCTCTTGACGACG | 59.829 | 55.000 | 0.00 | 0.00 | 40.10 | 5.12 |
6103 | 6498 | 2.200067 | CATGAGATGCCTCTTGACGAC | 58.800 | 52.381 | 0.00 | 0.00 | 43.42 | 4.34 |
6104 | 6499 | 1.827344 | ACATGAGATGCCTCTTGACGA | 59.173 | 47.619 | 0.00 | 0.00 | 43.42 | 4.20 |
6105 | 6500 | 2.159128 | AGACATGAGATGCCTCTTGACG | 60.159 | 50.000 | 0.00 | 0.00 | 43.42 | 4.35 |
6106 | 6501 | 3.540314 | AGACATGAGATGCCTCTTGAC | 57.460 | 47.619 | 0.00 | 8.34 | 43.42 | 3.18 |
6107 | 6502 | 4.713814 | ACTTAGACATGAGATGCCTCTTGA | 59.286 | 41.667 | 0.00 | 0.00 | 43.42 | 3.02 |
6108 | 6503 | 5.021033 | ACTTAGACATGAGATGCCTCTTG | 57.979 | 43.478 | 0.00 | 0.00 | 45.12 | 3.02 |
6109 | 6504 | 5.396213 | GGAACTTAGACATGAGATGCCTCTT | 60.396 | 44.000 | 0.00 | 0.00 | 40.10 | 2.85 |
6110 | 6505 | 4.100808 | GGAACTTAGACATGAGATGCCTCT | 59.899 | 45.833 | 0.00 | 0.00 | 40.10 | 3.69 |
6111 | 6506 | 4.141846 | TGGAACTTAGACATGAGATGCCTC | 60.142 | 45.833 | 0.00 | 0.00 | 39.86 | 4.70 |
6112 | 6507 | 3.776969 | TGGAACTTAGACATGAGATGCCT | 59.223 | 43.478 | 0.00 | 0.00 | 0.00 | 4.75 |
6113 | 6508 | 4.142609 | TGGAACTTAGACATGAGATGCC | 57.857 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
6114 | 6509 | 4.024218 | GCATGGAACTTAGACATGAGATGC | 60.024 | 45.833 | 15.81 | 0.00 | 43.46 | 3.91 |
6115 | 6510 | 4.514441 | GGCATGGAACTTAGACATGAGATG | 59.486 | 45.833 | 15.81 | 0.00 | 43.46 | 2.90 |
6116 | 6511 | 4.712476 | GGCATGGAACTTAGACATGAGAT | 58.288 | 43.478 | 15.81 | 0.00 | 43.46 | 2.75 |
6117 | 6512 | 3.430790 | CGGCATGGAACTTAGACATGAGA | 60.431 | 47.826 | 15.81 | 0.00 | 43.46 | 3.27 |
6118 | 6513 | 2.868583 | CGGCATGGAACTTAGACATGAG | 59.131 | 50.000 | 15.81 | 8.21 | 43.46 | 2.90 |
6119 | 6514 | 2.419990 | CCGGCATGGAACTTAGACATGA | 60.420 | 50.000 | 15.81 | 0.00 | 43.46 | 3.07 |
6120 | 6515 | 1.942657 | CCGGCATGGAACTTAGACATG | 59.057 | 52.381 | 0.00 | 10.23 | 43.58 | 3.21 |
6121 | 6516 | 1.134098 | CCCGGCATGGAACTTAGACAT | 60.134 | 52.381 | 0.00 | 0.00 | 42.00 | 3.06 |
6122 | 6517 | 0.251916 | CCCGGCATGGAACTTAGACA | 59.748 | 55.000 | 0.00 | 0.00 | 42.00 | 3.41 |
6123 | 6518 | 1.095807 | GCCCGGCATGGAACTTAGAC | 61.096 | 60.000 | 3.91 | 0.00 | 42.00 | 2.59 |
6124 | 6519 | 1.223487 | GCCCGGCATGGAACTTAGA | 59.777 | 57.895 | 3.91 | 0.00 | 42.00 | 2.10 |
6125 | 6520 | 1.077787 | TGCCCGGCATGGAACTTAG | 60.078 | 57.895 | 8.43 | 0.00 | 42.00 | 2.18 |
6126 | 6521 | 1.377987 | GTGCCCGGCATGGAACTTA | 60.378 | 57.895 | 16.96 | 0.00 | 41.91 | 2.24 |
6127 | 6522 | 2.676471 | GTGCCCGGCATGGAACTT | 60.676 | 61.111 | 16.96 | 0.00 | 41.91 | 2.66 |
6202 | 6597 | 1.410004 | TATGGGCACTTCTCTACGGG | 58.590 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
6206 | 6601 | 2.829720 | ACACGTTATGGGCACTTCTCTA | 59.170 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
6218 | 6615 | 2.706890 | ACAGGGCCTAAACACGTTATG | 58.293 | 47.619 | 5.28 | 0.00 | 0.00 | 1.90 |
6219 | 6616 | 3.428413 | AACAGGGCCTAAACACGTTAT | 57.572 | 42.857 | 5.28 | 0.00 | 0.00 | 1.89 |
6227 | 6624 | 3.825908 | AGAATCCAAACAGGGCCTAAA | 57.174 | 42.857 | 5.28 | 0.00 | 38.24 | 1.85 |
6231 | 6628 | 1.632589 | ACAAGAATCCAAACAGGGCC | 58.367 | 50.000 | 0.00 | 0.00 | 38.24 | 5.80 |
6232 | 6629 | 3.751479 | AAACAAGAATCCAAACAGGGC | 57.249 | 42.857 | 0.00 | 0.00 | 38.24 | 5.19 |
6233 | 6630 | 5.917462 | AGAAAAACAAGAATCCAAACAGGG | 58.083 | 37.500 | 0.00 | 0.00 | 38.24 | 4.45 |
6234 | 6631 | 7.765819 | AGAAAGAAAAACAAGAATCCAAACAGG | 59.234 | 33.333 | 0.00 | 0.00 | 39.47 | 4.00 |
6235 | 6632 | 8.707938 | AGAAAGAAAAACAAGAATCCAAACAG | 57.292 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
6263 | 6660 | 3.275999 | GGTGGCGGAAATACAAGTGTAT | 58.724 | 45.455 | 0.00 | 0.00 | 42.60 | 2.29 |
6264 | 6661 | 2.616001 | GGGTGGCGGAAATACAAGTGTA | 60.616 | 50.000 | 0.00 | 0.00 | 34.67 | 2.90 |
6265 | 6662 | 1.530323 | GGTGGCGGAAATACAAGTGT | 58.470 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
6266 | 6663 | 0.808755 | GGGTGGCGGAAATACAAGTG | 59.191 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6267 | 6664 | 0.402504 | TGGGTGGCGGAAATACAAGT | 59.597 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6268 | 6665 | 1.094785 | CTGGGTGGCGGAAATACAAG | 58.905 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6269 | 6666 | 0.693622 | TCTGGGTGGCGGAAATACAA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
6270 | 6667 | 0.693622 | TTCTGGGTGGCGGAAATACA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
6271 | 6668 | 1.339727 | ACTTCTGGGTGGCGGAAATAC | 60.340 | 52.381 | 0.00 | 0.00 | 0.00 | 1.89 |
6272 | 6669 | 0.988832 | ACTTCTGGGTGGCGGAAATA | 59.011 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
6273 | 6670 | 0.112412 | AACTTCTGGGTGGCGGAAAT | 59.888 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
6274 | 6671 | 0.766131 | TAACTTCTGGGTGGCGGAAA | 59.234 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
6275 | 6672 | 0.766131 | TTAACTTCTGGGTGGCGGAA | 59.234 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6276 | 6673 | 0.766131 | TTTAACTTCTGGGTGGCGGA | 59.234 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
6277 | 6674 | 1.611519 | TTTTAACTTCTGGGTGGCGG | 58.388 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
6278 | 6675 | 3.754323 | TGTATTTTAACTTCTGGGTGGCG | 59.246 | 43.478 | 0.00 | 0.00 | 0.00 | 5.69 |
6279 | 6676 | 4.082408 | GGTGTATTTTAACTTCTGGGTGGC | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 5.01 |
6280 | 6677 | 5.183140 | CAGGTGTATTTTAACTTCTGGGTGG | 59.817 | 44.000 | 0.00 | 0.00 | 0.00 | 4.61 |
6281 | 6678 | 5.768164 | ACAGGTGTATTTTAACTTCTGGGTG | 59.232 | 40.000 | 0.00 | 0.00 | 0.00 | 4.61 |
6282 | 6679 | 5.948842 | ACAGGTGTATTTTAACTTCTGGGT | 58.051 | 37.500 | 0.00 | 0.00 | 0.00 | 4.51 |
6283 | 6680 | 8.458843 | CAATACAGGTGTATTTTAACTTCTGGG | 58.541 | 37.037 | 11.84 | 0.00 | 45.90 | 4.45 |
6284 | 6681 | 9.226606 | TCAATACAGGTGTATTTTAACTTCTGG | 57.773 | 33.333 | 11.84 | 0.00 | 45.90 | 3.86 |
6293 | 6690 | 8.745590 | GGTGGTAATTCAATACAGGTGTATTTT | 58.254 | 33.333 | 11.84 | 7.72 | 45.90 | 1.82 |
6294 | 6691 | 7.891183 | TGGTGGTAATTCAATACAGGTGTATTT | 59.109 | 33.333 | 11.84 | 2.27 | 45.90 | 1.40 |
6296 | 6693 | 6.964464 | TGGTGGTAATTCAATACAGGTGTAT | 58.036 | 36.000 | 0.00 | 0.00 | 42.60 | 2.29 |
6297 | 6694 | 6.375830 | TGGTGGTAATTCAATACAGGTGTA | 57.624 | 37.500 | 0.00 | 0.00 | 34.67 | 2.90 |
6298 | 6695 | 5.249780 | TGGTGGTAATTCAATACAGGTGT | 57.750 | 39.130 | 0.00 | 0.00 | 0.00 | 4.16 |
6299 | 6696 | 6.773976 | AATGGTGGTAATTCAATACAGGTG | 57.226 | 37.500 | 0.00 | 0.00 | 0.00 | 4.00 |
6300 | 6697 | 6.831868 | GGTAATGGTGGTAATTCAATACAGGT | 59.168 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
6301 | 6698 | 6.831353 | TGGTAATGGTGGTAATTCAATACAGG | 59.169 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
6302 | 6699 | 7.201785 | GGTGGTAATGGTGGTAATTCAATACAG | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 2.74 |
6303 | 6700 | 6.603997 | GGTGGTAATGGTGGTAATTCAATACA | 59.396 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
6304 | 6701 | 6.603997 | TGGTGGTAATGGTGGTAATTCAATAC | 59.396 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
6305 | 6702 | 6.732487 | TGGTGGTAATGGTGGTAATTCAATA | 58.268 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
6306 | 6703 | 5.584913 | TGGTGGTAATGGTGGTAATTCAAT | 58.415 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
6307 | 6704 | 4.999310 | TGGTGGTAATGGTGGTAATTCAA | 58.001 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
6308 | 6705 | 4.659529 | TGGTGGTAATGGTGGTAATTCA | 57.340 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
6309 | 6706 | 5.533528 | GGTATGGTGGTAATGGTGGTAATTC | 59.466 | 44.000 | 0.00 | 0.00 | 0.00 | 2.17 |
6310 | 6707 | 5.044030 | TGGTATGGTGGTAATGGTGGTAATT | 60.044 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
6311 | 6708 | 4.479056 | TGGTATGGTGGTAATGGTGGTAAT | 59.521 | 41.667 | 0.00 | 0.00 | 0.00 | 1.89 |
6312 | 6709 | 3.850774 | TGGTATGGTGGTAATGGTGGTAA | 59.149 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
6313 | 6710 | 3.461824 | TGGTATGGTGGTAATGGTGGTA | 58.538 | 45.455 | 0.00 | 0.00 | 0.00 | 3.25 |
6314 | 6711 | 2.280103 | TGGTATGGTGGTAATGGTGGT | 58.720 | 47.619 | 0.00 | 0.00 | 0.00 | 4.16 |
6315 | 6712 | 3.287222 | CTTGGTATGGTGGTAATGGTGG | 58.713 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
6316 | 6713 | 2.687935 | GCTTGGTATGGTGGTAATGGTG | 59.312 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
6317 | 6714 | 2.682563 | CGCTTGGTATGGTGGTAATGGT | 60.683 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
6318 | 6715 | 1.946768 | CGCTTGGTATGGTGGTAATGG | 59.053 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
6319 | 6716 | 1.333619 | GCGCTTGGTATGGTGGTAATG | 59.666 | 52.381 | 0.00 | 0.00 | 0.00 | 1.90 |
6320 | 6717 | 1.675552 | GCGCTTGGTATGGTGGTAAT | 58.324 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
6321 | 6718 | 0.741574 | CGCGCTTGGTATGGTGGTAA | 60.742 | 55.000 | 5.56 | 0.00 | 0.00 | 2.85 |
6322 | 6719 | 1.153529 | CGCGCTTGGTATGGTGGTA | 60.154 | 57.895 | 5.56 | 0.00 | 0.00 | 3.25 |
6323 | 6720 | 2.435938 | CGCGCTTGGTATGGTGGT | 60.436 | 61.111 | 5.56 | 0.00 | 0.00 | 4.16 |
6324 | 6721 | 3.202001 | CCGCGCTTGGTATGGTGG | 61.202 | 66.667 | 5.56 | 0.00 | 0.00 | 4.61 |
6325 | 6722 | 3.876198 | GCCGCGCTTGGTATGGTG | 61.876 | 66.667 | 5.56 | 0.00 | 0.00 | 4.17 |
6327 | 6724 | 2.933878 | TAAGGCCGCGCTTGGTATGG | 62.934 | 60.000 | 5.56 | 0.00 | 0.00 | 2.74 |
6328 | 6725 | 1.498865 | CTAAGGCCGCGCTTGGTATG | 61.499 | 60.000 | 5.56 | 0.00 | 0.00 | 2.39 |
6329 | 6726 | 1.227556 | CTAAGGCCGCGCTTGGTAT | 60.228 | 57.895 | 5.56 | 0.00 | 0.00 | 2.73 |
6330 | 6727 | 2.185867 | CTAAGGCCGCGCTTGGTA | 59.814 | 61.111 | 5.56 | 0.00 | 0.00 | 3.25 |
6331 | 6728 | 3.665675 | CTCTAAGGCCGCGCTTGGT | 62.666 | 63.158 | 5.56 | 0.00 | 0.00 | 3.67 |
6332 | 6729 | 2.892425 | CTCTAAGGCCGCGCTTGG | 60.892 | 66.667 | 5.56 | 0.18 | 0.00 | 3.61 |
6333 | 6730 | 2.167861 | GTCTCTAAGGCCGCGCTTG | 61.168 | 63.158 | 5.56 | 0.00 | 0.00 | 4.01 |
6334 | 6731 | 1.889530 | AAGTCTCTAAGGCCGCGCTT | 61.890 | 55.000 | 5.56 | 1.72 | 0.00 | 4.68 |
6335 | 6732 | 2.286127 | GAAGTCTCTAAGGCCGCGCT | 62.286 | 60.000 | 5.56 | 0.00 | 0.00 | 5.92 |
6336 | 6733 | 1.878975 | GAAGTCTCTAAGGCCGCGC | 60.879 | 63.158 | 0.00 | 0.00 | 0.00 | 6.86 |
6337 | 6734 | 1.586564 | CGAAGTCTCTAAGGCCGCG | 60.587 | 63.158 | 0.00 | 0.00 | 0.00 | 6.46 |
6338 | 6735 | 1.878975 | GCGAAGTCTCTAAGGCCGC | 60.879 | 63.158 | 0.00 | 0.00 | 0.00 | 6.53 |
6339 | 6736 | 0.108804 | TTGCGAAGTCTCTAAGGCCG | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
6340 | 6737 | 2.094762 | TTTGCGAAGTCTCTAAGGCC | 57.905 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
6341 | 6738 | 3.684788 | TCAATTTGCGAAGTCTCTAAGGC | 59.315 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
6342 | 6739 | 6.980978 | TCTATCAATTTGCGAAGTCTCTAAGG | 59.019 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
6343 | 6740 | 7.993821 | TCTATCAATTTGCGAAGTCTCTAAG | 57.006 | 36.000 | 0.00 | 0.00 | 0.00 | 2.18 |
6344 | 6741 | 8.417106 | AGATCTATCAATTTGCGAAGTCTCTAA | 58.583 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
6345 | 6742 | 7.946207 | AGATCTATCAATTTGCGAAGTCTCTA | 58.054 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
6346 | 6743 | 6.815089 | AGATCTATCAATTTGCGAAGTCTCT | 58.185 | 36.000 | 0.00 | 0.00 | 0.00 | 3.10 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.