Multiple sequence alignment - TraesCS3B01G347200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G347200 chr3B 100.000 4133 0 0 1 4133 556644788 556648920 0.000000e+00 7633.0
1 TraesCS3B01G347200 chr3A 90.150 2193 130 37 557 2706 561037183 561035034 0.000000e+00 2774.0
2 TraesCS3B01G347200 chr3A 88.470 451 38 9 2867 3309 561034978 561034534 2.190000e-147 532.0
3 TraesCS3B01G347200 chr3A 82.558 258 25 12 317 563 561038974 561038726 4.190000e-50 209.0
4 TraesCS3B01G347200 chr3A 93.284 134 6 2 3311 3441 561034413 561034280 1.170000e-45 195.0
5 TraesCS3B01G347200 chr3A 82.857 105 17 1 217 320 726312854 726312958 4.400000e-15 93.5
6 TraesCS3B01G347200 chr3D 88.709 1975 114 45 508 2421 426931920 426933846 0.000000e+00 2311.0
7 TraesCS3B01G347200 chr3D 92.873 449 25 5 2867 3309 426934259 426934706 0.000000e+00 645.0
8 TraesCS3B01G347200 chr3D 88.285 239 16 8 2479 2706 426933966 426934203 4.070000e-70 276.0
9 TraesCS3B01G347200 chr3D 92.035 113 9 0 3305 3417 426934821 426934933 4.280000e-35 159.0
10 TraesCS3B01G347200 chr3D 94.845 97 4 1 2770 2865 426934194 426934290 2.570000e-32 150.0
11 TraesCS3B01G347200 chr4B 97.391 690 18 0 3444 4133 241359257 241359946 0.000000e+00 1175.0
12 TraesCS3B01G347200 chr4B 96.812 690 22 0 3444 4133 427256436 427255747 0.000000e+00 1153.0
13 TraesCS3B01G347200 chr1D 97.246 690 19 0 3444 4133 111714886 111714197 0.000000e+00 1170.0
14 TraesCS3B01G347200 chr7D 96.957 690 21 0 3444 4133 71366037 71365348 0.000000e+00 1158.0
15 TraesCS3B01G347200 chr7D 96.957 690 20 1 3444 4133 28183966 28184654 0.000000e+00 1157.0
16 TraesCS3B01G347200 chr7D 96.812 690 22 0 3444 4133 549787172 549786483 0.000000e+00 1153.0
17 TraesCS3B01G347200 chr4D 96.957 690 21 0 3444 4133 21227001 21226312 0.000000e+00 1158.0
18 TraesCS3B01G347200 chr4A 96.957 690 21 0 3444 4133 688804708 688805397 0.000000e+00 1158.0
19 TraesCS3B01G347200 chr2D 96.812 690 22 0 3444 4133 381330340 381331029 0.000000e+00 1153.0
20 TraesCS3B01G347200 chr6A 79.739 306 43 13 9 297 614849476 614849779 1.950000e-48 204.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G347200 chr3B 556644788 556648920 4132 False 7633.0 7633 100.0000 1 4133 1 chr3B.!!$F1 4132
1 TraesCS3B01G347200 chr3A 561034280 561038974 4694 True 927.5 2774 88.6155 317 3441 4 chr3A.!!$R1 3124
2 TraesCS3B01G347200 chr3D 426931920 426934933 3013 False 708.2 2311 91.3494 508 3417 5 chr3D.!!$F1 2909
3 TraesCS3B01G347200 chr4B 241359257 241359946 689 False 1175.0 1175 97.3910 3444 4133 1 chr4B.!!$F1 689
4 TraesCS3B01G347200 chr4B 427255747 427256436 689 True 1153.0 1153 96.8120 3444 4133 1 chr4B.!!$R1 689
5 TraesCS3B01G347200 chr1D 111714197 111714886 689 True 1170.0 1170 97.2460 3444 4133 1 chr1D.!!$R1 689
6 TraesCS3B01G347200 chr7D 71365348 71366037 689 True 1158.0 1158 96.9570 3444 4133 1 chr7D.!!$R1 689
7 TraesCS3B01G347200 chr7D 28183966 28184654 688 False 1157.0 1157 96.9570 3444 4133 1 chr7D.!!$F1 689
8 TraesCS3B01G347200 chr7D 549786483 549787172 689 True 1153.0 1153 96.8120 3444 4133 1 chr7D.!!$R2 689
9 TraesCS3B01G347200 chr4D 21226312 21227001 689 True 1158.0 1158 96.9570 3444 4133 1 chr4D.!!$R1 689
10 TraesCS3B01G347200 chr4A 688804708 688805397 689 False 1158.0 1158 96.9570 3444 4133 1 chr4A.!!$F1 689
11 TraesCS3B01G347200 chr2D 381330340 381331029 689 False 1153.0 1153 96.8120 3444 4133 1 chr2D.!!$F1 689

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
237 238 0.037139 TTTCGCCCGAGATTTTCCGA 60.037 50.0 0.00 0.0 0.00 4.55 F
769 2359 0.177604 CATCTCACCAGGAGTCAGGC 59.822 60.0 0.00 0.0 44.40 4.85 F
1231 2849 0.173255 GCTAATGGCAATGGCGTGTT 59.827 50.0 1.22 0.0 42.47 3.32 F
2413 4059 0.329596 GTTCTGTCTGGGATTGGGCT 59.670 55.0 0.00 0.0 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1164 2769 0.177836 GAAGAAGAGGAGGAGGCAGC 59.822 60.0 0.00 0.0 0.0 5.25 R
2325 3965 0.179078 ACCGATCGAGCGAGTCTACT 60.179 55.0 26.68 0.0 0.0 2.57 R
2659 4380 0.661020 AACTTCGGCCTCAACGTTTG 59.339 50.0 0.00 0.0 0.0 2.93 R
3266 4997 0.108992 AGCTTGCCATCAACATTGCG 60.109 50.0 0.00 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.965902 AATCAAGGAGAAAGATAAGTTGTATGT 57.034 29.630 0.00 0.00 0.00 2.29
37 38 9.838339 AGAAAGATAAGTTGTATGTATTGAGGG 57.162 33.333 0.00 0.00 0.00 4.30
38 39 8.980481 AAAGATAAGTTGTATGTATTGAGGGG 57.020 34.615 0.00 0.00 0.00 4.79
39 40 7.691993 AGATAAGTTGTATGTATTGAGGGGT 57.308 36.000 0.00 0.00 0.00 4.95
40 41 8.102484 AGATAAGTTGTATGTATTGAGGGGTT 57.898 34.615 0.00 0.00 0.00 4.11
41 42 8.211629 AGATAAGTTGTATGTATTGAGGGGTTC 58.788 37.037 0.00 0.00 0.00 3.62
42 43 5.112129 AGTTGTATGTATTGAGGGGTTCC 57.888 43.478 0.00 0.00 0.00 3.62
44 45 5.253096 AGTTGTATGTATTGAGGGGTTCCTT 59.747 40.000 0.00 0.00 45.05 3.36
45 46 5.367945 TGTATGTATTGAGGGGTTCCTTC 57.632 43.478 0.00 0.00 45.05 3.46
46 47 5.036916 TGTATGTATTGAGGGGTTCCTTCT 58.963 41.667 0.00 0.00 45.05 2.85
47 48 6.206787 TGTATGTATTGAGGGGTTCCTTCTA 58.793 40.000 0.00 0.00 45.05 2.10
48 49 5.896073 ATGTATTGAGGGGTTCCTTCTAG 57.104 43.478 0.00 0.00 45.05 2.43
49 50 4.695606 TGTATTGAGGGGTTCCTTCTAGT 58.304 43.478 0.00 0.00 45.05 2.57
50 51 5.098663 TGTATTGAGGGGTTCCTTCTAGTT 58.901 41.667 0.00 0.00 45.05 2.24
51 52 5.550403 TGTATTGAGGGGTTCCTTCTAGTTT 59.450 40.000 0.00 0.00 45.05 2.66
52 53 5.600669 ATTGAGGGGTTCCTTCTAGTTTT 57.399 39.130 0.00 0.00 45.05 2.43
53 54 6.713731 ATTGAGGGGTTCCTTCTAGTTTTA 57.286 37.500 0.00 0.00 45.05 1.52
54 55 6.713731 TTGAGGGGTTCCTTCTAGTTTTAT 57.286 37.500 0.00 0.00 45.05 1.40
55 56 6.309389 TGAGGGGTTCCTTCTAGTTTTATC 57.691 41.667 0.00 0.00 45.05 1.75
56 57 5.788533 TGAGGGGTTCCTTCTAGTTTTATCA 59.211 40.000 0.00 0.00 45.05 2.15
57 58 6.273730 TGAGGGGTTCCTTCTAGTTTTATCAA 59.726 38.462 0.00 0.00 45.05 2.57
58 59 6.722328 AGGGGTTCCTTCTAGTTTTATCAAG 58.278 40.000 0.00 0.00 41.56 3.02
59 60 6.274908 AGGGGTTCCTTCTAGTTTTATCAAGT 59.725 38.462 0.00 0.00 41.56 3.16
60 61 6.946583 GGGGTTCCTTCTAGTTTTATCAAGTT 59.053 38.462 0.00 0.00 0.00 2.66
61 62 7.120873 GGGGTTCCTTCTAGTTTTATCAAGTTC 59.879 40.741 0.00 0.00 0.00 3.01
62 63 7.120873 GGGTTCCTTCTAGTTTTATCAAGTTCC 59.879 40.741 0.00 0.00 0.00 3.62
63 64 7.883833 GGTTCCTTCTAGTTTTATCAAGTTCCT 59.116 37.037 0.00 0.00 0.00 3.36
64 65 8.722394 GTTCCTTCTAGTTTTATCAAGTTCCTG 58.278 37.037 0.00 0.00 0.00 3.86
65 66 8.202461 TCCTTCTAGTTTTATCAAGTTCCTGA 57.798 34.615 0.00 0.00 0.00 3.86
66 67 8.826765 TCCTTCTAGTTTTATCAAGTTCCTGAT 58.173 33.333 0.00 0.00 39.41 2.90
67 68 9.454859 CCTTCTAGTTTTATCAAGTTCCTGATT 57.545 33.333 0.00 0.00 37.27 2.57
69 70 8.792830 TCTAGTTTTATCAAGTTCCTGATTGG 57.207 34.615 0.00 0.00 37.27 3.16
70 71 8.602424 TCTAGTTTTATCAAGTTCCTGATTGGA 58.398 33.333 0.00 0.00 44.51 3.53
79 80 1.538047 TCCTGATTGGAGTTTGCTGC 58.462 50.000 0.00 0.00 40.56 5.25
80 81 1.202915 TCCTGATTGGAGTTTGCTGCA 60.203 47.619 0.00 0.00 40.56 4.41
85 86 1.761449 TTGGAGTTTGCTGCAACTGA 58.239 45.000 15.72 0.00 45.89 3.41
86 87 1.761449 TGGAGTTTGCTGCAACTGAA 58.239 45.000 15.72 0.00 40.15 3.02
87 88 1.677576 TGGAGTTTGCTGCAACTGAAG 59.322 47.619 15.72 0.00 40.15 3.02
88 89 5.587553 TTGGAGTTTGCTGCAACTGAAGC 62.588 47.826 15.72 2.42 45.89 3.86
93 94 3.302968 GCTGCAACTGAAGCGATTC 57.697 52.632 6.43 6.43 36.90 2.52
94 95 0.518636 GCTGCAACTGAAGCGATTCA 59.481 50.000 16.26 16.26 36.90 2.57
95 96 1.131883 GCTGCAACTGAAGCGATTCAT 59.868 47.619 17.55 0.00 36.90 2.57
96 97 2.782163 CTGCAACTGAAGCGATTCATG 58.218 47.619 17.55 14.19 33.85 3.07
97 98 1.469703 TGCAACTGAAGCGATTCATGG 59.530 47.619 17.55 8.84 33.85 3.66
98 99 1.202222 GCAACTGAAGCGATTCATGGG 60.202 52.381 17.55 8.08 0.00 4.00
99 100 2.086869 CAACTGAAGCGATTCATGGGT 58.913 47.619 17.55 8.77 0.00 4.51
100 101 1.742761 ACTGAAGCGATTCATGGGTG 58.257 50.000 17.55 7.30 0.00 4.61
101 102 0.379669 CTGAAGCGATTCATGGGTGC 59.620 55.000 17.55 0.00 0.00 5.01
102 103 0.322366 TGAAGCGATTCATGGGTGCA 60.322 50.000 12.91 0.00 0.00 4.57
103 104 0.099436 GAAGCGATTCATGGGTGCAC 59.901 55.000 8.80 8.80 0.00 4.57
104 105 0.608856 AAGCGATTCATGGGTGCACA 60.609 50.000 20.43 0.00 0.00 4.57
105 106 0.394762 AGCGATTCATGGGTGCACAT 60.395 50.000 20.43 0.81 0.00 3.21
106 107 0.457035 GCGATTCATGGGTGCACATT 59.543 50.000 20.43 0.00 0.00 2.71
107 108 1.534595 GCGATTCATGGGTGCACATTC 60.535 52.381 20.43 8.12 0.00 2.67
108 109 1.744522 CGATTCATGGGTGCACATTCA 59.255 47.619 20.43 13.75 0.00 2.57
109 110 2.164017 CGATTCATGGGTGCACATTCAA 59.836 45.455 20.43 4.58 0.00 2.69
110 111 3.514645 GATTCATGGGTGCACATTCAAC 58.485 45.455 20.43 0.00 0.00 3.18
111 112 2.291209 TCATGGGTGCACATTCAACT 57.709 45.000 20.43 0.00 0.00 3.16
112 113 1.887854 TCATGGGTGCACATTCAACTG 59.112 47.619 20.43 9.68 0.00 3.16
113 114 1.887854 CATGGGTGCACATTCAACTGA 59.112 47.619 20.43 0.00 0.00 3.41
114 115 2.291209 TGGGTGCACATTCAACTGAT 57.709 45.000 20.43 0.00 0.00 2.90
115 116 3.431673 TGGGTGCACATTCAACTGATA 57.568 42.857 20.43 0.00 0.00 2.15
116 117 3.346315 TGGGTGCACATTCAACTGATAG 58.654 45.455 20.43 0.00 0.00 2.08
117 118 3.244875 TGGGTGCACATTCAACTGATAGT 60.245 43.478 20.43 0.00 0.00 2.12
118 119 3.758554 GGGTGCACATTCAACTGATAGTT 59.241 43.478 20.43 0.00 39.39 2.24
134 135 9.547753 AACTGATAGTTGCGATTATGTAAGATT 57.452 29.630 0.00 0.00 37.00 2.40
135 136 9.197694 ACTGATAGTTGCGATTATGTAAGATTC 57.802 33.333 0.00 0.00 0.00 2.52
136 137 9.196552 CTGATAGTTGCGATTATGTAAGATTCA 57.803 33.333 0.00 0.00 0.00 2.57
137 138 9.196552 TGATAGTTGCGATTATGTAAGATTCAG 57.803 33.333 0.00 0.00 0.00 3.02
138 139 6.292389 AGTTGCGATTATGTAAGATTCAGC 57.708 37.500 0.00 0.00 0.00 4.26
139 140 6.051717 AGTTGCGATTATGTAAGATTCAGCT 58.948 36.000 0.00 0.00 0.00 4.24
140 141 6.540189 AGTTGCGATTATGTAAGATTCAGCTT 59.460 34.615 0.00 0.00 0.00 3.74
141 142 6.925610 TGCGATTATGTAAGATTCAGCTTT 57.074 33.333 0.00 0.00 0.00 3.51
142 143 6.718388 TGCGATTATGTAAGATTCAGCTTTG 58.282 36.000 0.00 0.00 0.00 2.77
143 144 6.316140 TGCGATTATGTAAGATTCAGCTTTGT 59.684 34.615 0.00 0.00 0.00 2.83
144 145 7.148255 TGCGATTATGTAAGATTCAGCTTTGTT 60.148 33.333 0.00 0.00 0.00 2.83
145 146 7.698130 GCGATTATGTAAGATTCAGCTTTGTTT 59.302 33.333 0.00 0.00 0.00 2.83
146 147 9.214953 CGATTATGTAAGATTCAGCTTTGTTTC 57.785 33.333 0.00 0.00 0.00 2.78
147 148 9.508567 GATTATGTAAGATTCAGCTTTGTTTCC 57.491 33.333 0.00 0.00 0.00 3.13
148 149 8.635765 TTATGTAAGATTCAGCTTTGTTTCCT 57.364 30.769 0.00 0.00 0.00 3.36
149 150 6.959639 TGTAAGATTCAGCTTTGTTTCCTT 57.040 33.333 0.00 0.00 0.00 3.36
150 151 7.346751 TGTAAGATTCAGCTTTGTTTCCTTT 57.653 32.000 0.00 0.00 0.00 3.11
151 152 7.202526 TGTAAGATTCAGCTTTGTTTCCTTTG 58.797 34.615 0.00 0.00 0.00 2.77
152 153 4.625028 AGATTCAGCTTTGTTTCCTTTGC 58.375 39.130 0.00 0.00 0.00 3.68
153 154 4.343239 AGATTCAGCTTTGTTTCCTTTGCT 59.657 37.500 0.00 0.00 0.00 3.91
154 155 3.441496 TCAGCTTTGTTTCCTTTGCTG 57.559 42.857 0.00 0.00 46.21 4.41
155 156 2.760092 TCAGCTTTGTTTCCTTTGCTGT 59.240 40.909 11.64 0.00 45.39 4.40
156 157 3.951037 TCAGCTTTGTTTCCTTTGCTGTA 59.049 39.130 11.64 0.00 45.39 2.74
157 158 4.036734 TCAGCTTTGTTTCCTTTGCTGTAG 59.963 41.667 11.64 0.00 45.39 2.74
158 159 3.319122 AGCTTTGTTTCCTTTGCTGTAGG 59.681 43.478 0.00 0.00 0.00 3.18
159 160 3.317993 GCTTTGTTTCCTTTGCTGTAGGA 59.682 43.478 0.00 0.00 40.01 2.94
160 161 4.021981 GCTTTGTTTCCTTTGCTGTAGGAT 60.022 41.667 3.42 0.00 41.30 3.24
161 162 5.509670 GCTTTGTTTCCTTTGCTGTAGGATT 60.510 40.000 3.42 0.00 41.30 3.01
162 163 5.705609 TTGTTTCCTTTGCTGTAGGATTC 57.294 39.130 3.42 1.97 41.30 2.52
163 164 4.079253 TGTTTCCTTTGCTGTAGGATTCC 58.921 43.478 0.00 0.00 41.30 3.01
164 165 4.079253 GTTTCCTTTGCTGTAGGATTCCA 58.921 43.478 5.29 0.00 41.30 3.53
165 166 4.380843 TTCCTTTGCTGTAGGATTCCAA 57.619 40.909 5.29 0.00 41.30 3.53
166 167 4.380843 TCCTTTGCTGTAGGATTCCAAA 57.619 40.909 5.29 0.00 36.88 3.28
167 168 4.934356 TCCTTTGCTGTAGGATTCCAAAT 58.066 39.130 5.29 0.00 36.88 2.32
168 169 5.332743 TCCTTTGCTGTAGGATTCCAAATT 58.667 37.500 5.29 0.00 36.88 1.82
169 170 5.779771 TCCTTTGCTGTAGGATTCCAAATTT 59.220 36.000 5.29 0.00 36.88 1.82
170 171 6.269769 TCCTTTGCTGTAGGATTCCAAATTTT 59.730 34.615 5.29 0.00 36.88 1.82
171 172 6.936335 CCTTTGCTGTAGGATTCCAAATTTTT 59.064 34.615 5.29 0.00 34.56 1.94
172 173 7.095102 CCTTTGCTGTAGGATTCCAAATTTTTG 60.095 37.037 5.29 0.00 34.56 2.44
216 217 9.680315 TTCAAAATTTCAAAATTTGGATCATGC 57.320 25.926 15.39 0.00 43.89 4.06
217 218 9.069082 TCAAAATTTCAAAATTTGGATCATGCT 57.931 25.926 10.19 0.00 45.16 3.79
218 219 9.685828 CAAAATTTCAAAATTTGGATCATGCTT 57.314 25.926 12.78 0.00 45.16 3.91
221 222 9.902196 AATTTCAAAATTTGGATCATGCTTTTC 57.098 25.926 5.83 0.00 35.16 2.29
222 223 6.709145 TCAAAATTTGGATCATGCTTTTCG 57.291 33.333 5.83 0.00 0.00 3.46
223 224 5.120519 TCAAAATTTGGATCATGCTTTTCGC 59.879 36.000 5.83 0.00 39.77 4.70
224 225 2.652941 TTTGGATCATGCTTTTCGCC 57.347 45.000 0.00 0.00 38.05 5.54
225 226 0.817013 TTGGATCATGCTTTTCGCCC 59.183 50.000 0.00 0.00 38.05 6.13
226 227 1.356624 GGATCATGCTTTTCGCCCG 59.643 57.895 0.00 0.00 38.05 6.13
227 228 1.095228 GGATCATGCTTTTCGCCCGA 61.095 55.000 0.00 0.00 38.05 5.14
228 229 0.305922 GATCATGCTTTTCGCCCGAG 59.694 55.000 0.00 0.00 38.05 4.63
229 230 0.107703 ATCATGCTTTTCGCCCGAGA 60.108 50.000 0.00 0.00 38.05 4.04
230 231 0.107703 TCATGCTTTTCGCCCGAGAT 60.108 50.000 0.00 0.00 38.05 2.75
231 232 0.734889 CATGCTTTTCGCCCGAGATT 59.265 50.000 0.00 0.00 38.05 2.40
232 233 1.133025 CATGCTTTTCGCCCGAGATTT 59.867 47.619 0.00 0.00 38.05 2.17
233 234 1.243902 TGCTTTTCGCCCGAGATTTT 58.756 45.000 0.00 0.00 38.05 1.82
234 235 1.199097 TGCTTTTCGCCCGAGATTTTC 59.801 47.619 0.00 0.00 38.05 2.29
235 236 1.467543 GCTTTTCGCCCGAGATTTTCC 60.468 52.381 0.00 0.00 0.00 3.13
236 237 0.800012 TTTTCGCCCGAGATTTTCCG 59.200 50.000 0.00 0.00 0.00 4.30
237 238 0.037139 TTTCGCCCGAGATTTTCCGA 60.037 50.000 0.00 0.00 0.00 4.55
238 239 0.037139 TTCGCCCGAGATTTTCCGAA 60.037 50.000 0.00 0.00 33.05 4.30
239 240 0.037139 TCGCCCGAGATTTTCCGAAA 60.037 50.000 0.00 0.00 0.00 3.46
240 241 0.800012 CGCCCGAGATTTTCCGAAAA 59.200 50.000 8.71 8.71 34.41 2.29
241 242 1.198178 CGCCCGAGATTTTCCGAAAAA 59.802 47.619 10.27 0.00 38.66 1.94
242 243 2.159435 CGCCCGAGATTTTCCGAAAAAT 60.159 45.455 10.27 0.00 45.55 1.82
243 244 3.672241 CGCCCGAGATTTTCCGAAAAATT 60.672 43.478 10.27 2.20 43.48 1.82
244 245 4.242475 GCCCGAGATTTTCCGAAAAATTT 58.758 39.130 10.27 0.00 43.48 1.82
245 246 4.326278 GCCCGAGATTTTCCGAAAAATTTC 59.674 41.667 10.27 0.92 43.48 2.17
246 247 4.862574 CCCGAGATTTTCCGAAAAATTTCC 59.137 41.667 10.27 0.00 43.48 3.13
247 248 4.557301 CCGAGATTTTCCGAAAAATTTCCG 59.443 41.667 10.27 9.33 43.48 4.30
248 249 5.387279 CGAGATTTTCCGAAAAATTTCCGA 58.613 37.500 10.27 0.00 43.48 4.55
249 250 5.854338 CGAGATTTTCCGAAAAATTTCCGAA 59.146 36.000 10.27 5.83 43.48 4.30
250 251 6.361214 CGAGATTTTCCGAAAAATTTCCGAAA 59.639 34.615 10.27 14.27 43.48 3.46
251 252 7.061789 CGAGATTTTCCGAAAAATTTCCGAAAT 59.938 33.333 17.12 12.34 43.48 2.17
252 253 9.349145 GAGATTTTCCGAAAAATTTCCGAAATA 57.651 29.630 17.12 11.52 43.48 1.40
253 254 9.353999 AGATTTTCCGAAAAATTTCCGAAATAG 57.646 29.630 17.12 0.00 43.48 1.73
254 255 6.937886 TTTCCGAAAAATTTCCGAAATAGC 57.062 33.333 14.27 0.00 38.51 2.97
255 256 4.654015 TCCGAAAAATTTCCGAAATAGCG 58.346 39.130 6.79 8.19 33.68 4.26
256 257 4.392445 TCCGAAAAATTTCCGAAATAGCGA 59.608 37.500 6.79 0.00 33.68 4.93
257 258 5.090083 CCGAAAAATTTCCGAAATAGCGAA 58.910 37.500 6.79 0.00 33.68 4.70
258 259 5.741982 CCGAAAAATTTCCGAAATAGCGAAT 59.258 36.000 6.79 0.00 33.68 3.34
259 260 6.252655 CCGAAAAATTTCCGAAATAGCGAATT 59.747 34.615 6.79 0.00 33.68 2.17
260 261 7.201401 CCGAAAAATTTCCGAAATAGCGAATTT 60.201 33.333 6.79 0.85 35.84 1.82
261 262 7.834591 CGAAAAATTTCCGAAATAGCGAATTTC 59.165 33.333 6.79 14.22 46.78 2.17
272 273 3.988459 CGAATTTCGCCCATTTCGT 57.012 47.368 5.78 0.00 36.96 3.85
273 274 1.810197 CGAATTTCGCCCATTTCGTC 58.190 50.000 5.78 0.00 36.96 4.20
274 275 1.531058 CGAATTTCGCCCATTTCGTCC 60.531 52.381 5.78 0.00 36.96 4.79
275 276 1.470890 GAATTTCGCCCATTTCGTCCA 59.529 47.619 0.00 0.00 0.00 4.02
276 277 1.094785 ATTTCGCCCATTTCGTCCAG 58.905 50.000 0.00 0.00 0.00 3.86
277 278 0.958382 TTTCGCCCATTTCGTCCAGG 60.958 55.000 0.00 0.00 0.00 4.45
278 279 2.813226 TTCGCCCATTTCGTCCAGGG 62.813 60.000 0.00 0.00 44.37 4.45
279 280 2.674754 GCCCATTTCGTCCAGGGA 59.325 61.111 9.38 0.00 44.30 4.20
280 281 1.749258 GCCCATTTCGTCCAGGGAC 60.749 63.158 8.44 8.44 44.30 4.46
291 292 3.842732 GTCCAGGGACGGTAAATTTTG 57.157 47.619 2.15 0.00 35.30 2.44
292 293 2.490509 GTCCAGGGACGGTAAATTTTGG 59.509 50.000 2.15 0.00 35.30 3.28
293 294 2.375845 TCCAGGGACGGTAAATTTTGGA 59.624 45.455 0.00 0.00 0.00 3.53
294 295 3.158676 CCAGGGACGGTAAATTTTGGAA 58.841 45.455 0.00 0.00 0.00 3.53
295 296 3.574826 CCAGGGACGGTAAATTTTGGAAA 59.425 43.478 0.00 0.00 0.00 3.13
296 297 4.039366 CCAGGGACGGTAAATTTTGGAAAA 59.961 41.667 0.00 0.00 0.00 2.29
297 298 4.986034 CAGGGACGGTAAATTTTGGAAAAC 59.014 41.667 0.00 0.00 0.00 2.43
298 299 3.982701 GGGACGGTAAATTTTGGAAAACG 59.017 43.478 0.00 0.00 0.00 3.60
299 300 4.261530 GGGACGGTAAATTTTGGAAAACGA 60.262 41.667 2.53 0.00 0.00 3.85
300 301 5.280164 GGACGGTAAATTTTGGAAAACGAA 58.720 37.500 2.53 0.00 0.00 3.85
301 302 5.747675 GGACGGTAAATTTTGGAAAACGAAA 59.252 36.000 2.53 0.00 36.90 3.46
302 303 6.421501 GGACGGTAAATTTTGGAAAACGAAAT 59.578 34.615 2.53 0.00 43.50 2.17
303 304 7.358600 GGACGGTAAATTTTGGAAAACGAAATC 60.359 37.037 2.53 0.00 41.33 2.17
304 305 6.421501 ACGGTAAATTTTGGAAAACGAAATCC 59.578 34.615 2.53 0.00 41.33 3.01
305 306 6.421202 CGGTAAATTTTGGAAAACGAAATCCA 59.579 34.615 0.00 0.00 41.33 3.41
314 315 6.578023 TGGAAAACGAAATCCAAAATCTTGT 58.422 32.000 5.56 0.00 42.61 3.16
315 316 6.699642 TGGAAAACGAAATCCAAAATCTTGTC 59.300 34.615 5.56 0.00 42.61 3.18
319 320 7.504924 AACGAAATCCAAAATCTTGTCTGTA 57.495 32.000 0.00 0.00 0.00 2.74
328 329 7.122055 TCCAAAATCTTGTCTGTACTGTGTTTT 59.878 33.333 0.00 0.00 0.00 2.43
360 361 7.475840 AGAACTCGCAATTGGAATTCTATTTC 58.524 34.615 14.78 0.32 0.00 2.17
365 366 5.973565 CGCAATTGGAATTCTATTTCTGGAC 59.026 40.000 7.72 0.00 0.00 4.02
374 375 2.766263 TCTATTTCTGGACTGTCGGCAT 59.234 45.455 1.07 0.00 0.00 4.40
391 392 3.191162 CGGCATGTTGATCTTTTCCTTGA 59.809 43.478 0.00 0.00 0.00 3.02
392 393 4.142315 CGGCATGTTGATCTTTTCCTTGAT 60.142 41.667 0.00 0.00 0.00 2.57
393 394 5.622914 CGGCATGTTGATCTTTTCCTTGATT 60.623 40.000 0.00 0.00 0.00 2.57
394 395 5.579511 GGCATGTTGATCTTTTCCTTGATTG 59.420 40.000 0.00 0.00 0.00 2.67
395 396 6.392354 GCATGTTGATCTTTTCCTTGATTGA 58.608 36.000 0.00 0.00 0.00 2.57
436 442 7.637709 AAAAACAGCTCGGTTAATTTCAATC 57.362 32.000 0.00 0.00 0.00 2.67
437 443 4.600012 ACAGCTCGGTTAATTTCAATCG 57.400 40.909 0.00 0.00 33.28 3.34
438 444 4.000988 ACAGCTCGGTTAATTTCAATCGT 58.999 39.130 0.00 0.00 33.73 3.73
439 445 5.172934 ACAGCTCGGTTAATTTCAATCGTA 58.827 37.500 0.00 0.00 33.73 3.43
440 446 5.063060 ACAGCTCGGTTAATTTCAATCGTAC 59.937 40.000 0.00 0.00 33.73 3.67
443 449 5.731263 GCTCGGTTAATTTCAATCGTACAAC 59.269 40.000 0.00 0.00 33.73 3.32
444 450 6.619018 GCTCGGTTAATTTCAATCGTACAACA 60.619 38.462 0.00 0.00 33.73 3.33
447 453 8.382130 TCGGTTAATTTCAATCGTACAACATAC 58.618 33.333 0.00 0.00 33.73 2.39
457 463 4.222589 CAACATACCGCGCGGCAG 62.223 66.667 46.22 35.66 39.32 4.85
473 479 1.008538 CAGGCGTGACAAGCAAACC 60.009 57.895 15.33 0.00 36.08 3.27
474 480 1.152963 AGGCGTGACAAGCAAACCT 60.153 52.632 15.33 0.10 36.08 3.50
495 501 4.567959 CCTCTCAAACCAAGCAACAAAAAG 59.432 41.667 0.00 0.00 0.00 2.27
555 570 4.714632 TCCAACTTTACCTGTGAAGGAAG 58.285 43.478 6.74 0.00 31.32 3.46
668 2232 3.135994 CGAAGGTCTAGACTCTAGAGCC 58.864 54.545 29.59 23.56 41.52 4.70
669 2233 3.432467 CGAAGGTCTAGACTCTAGAGCCA 60.432 52.174 29.59 4.13 41.52 4.75
670 2234 3.857157 AGGTCTAGACTCTAGAGCCAG 57.143 52.381 29.59 13.49 41.52 4.85
671 2235 2.158667 AGGTCTAGACTCTAGAGCCAGC 60.159 54.545 29.59 14.40 41.52 4.85
672 2236 2.227194 GTCTAGACTCTAGAGCCAGCC 58.773 57.143 19.97 0.61 0.00 4.85
673 2237 1.144093 TCTAGACTCTAGAGCCAGCCC 59.856 57.143 19.97 2.68 0.00 5.19
718 2304 7.272144 ACTAGTTTCTCCCATTGTAATCCTT 57.728 36.000 0.00 0.00 0.00 3.36
743 2329 1.001158 GCGAGAGATTCCCGAACCTAG 60.001 57.143 0.00 0.00 0.00 3.02
752 2338 3.897657 TCCCGAACCTAGACTATCCAT 57.102 47.619 0.00 0.00 0.00 3.41
755 2341 3.759618 CCCGAACCTAGACTATCCATCTC 59.240 52.174 0.00 0.00 0.00 2.75
756 2342 4.399219 CCGAACCTAGACTATCCATCTCA 58.601 47.826 0.00 0.00 0.00 3.27
757 2343 4.216687 CCGAACCTAGACTATCCATCTCAC 59.783 50.000 0.00 0.00 0.00 3.51
768 2358 0.829333 CCATCTCACCAGGAGTCAGG 59.171 60.000 0.00 0.00 44.40 3.86
769 2359 0.177604 CATCTCACCAGGAGTCAGGC 59.822 60.000 0.00 0.00 44.40 4.85
796 2386 3.343788 CTCGGTCAGTGAGGCGTCC 62.344 68.421 3.56 0.00 0.00 4.79
797 2387 3.680786 CGGTCAGTGAGGCGTCCA 61.681 66.667 3.56 0.00 0.00 4.02
798 2388 2.741092 GGTCAGTGAGGCGTCCAA 59.259 61.111 3.56 0.00 0.00 3.53
800 2390 2.022129 GTCAGTGAGGCGTCCAACG 61.022 63.158 3.56 0.00 45.88 4.10
870 2475 2.783288 CGGCCGTCCTCCCTCTAAC 61.783 68.421 19.50 0.00 0.00 2.34
871 2476 1.381463 GGCCGTCCTCCCTCTAACT 60.381 63.158 0.00 0.00 0.00 2.24
872 2477 1.677637 GGCCGTCCTCCCTCTAACTG 61.678 65.000 0.00 0.00 0.00 3.16
873 2478 1.817209 CCGTCCTCCCTCTAACTGC 59.183 63.158 0.00 0.00 0.00 4.40
899 2504 2.021457 GGCCTACACACAACAACTGTT 58.979 47.619 0.00 0.00 35.47 3.16
910 2515 5.127031 ACACAACAACTGTTAGCCAAAGATT 59.873 36.000 0.00 0.00 35.47 2.40
943 2548 4.531332 GGCGTACGTCTTAAATAGATCGT 58.469 43.478 17.90 0.00 40.82 3.73
963 2568 2.571548 GCTGTAGCTTTGGTGGCAT 58.428 52.632 0.00 0.00 38.21 4.40
1010 2615 2.107141 GCCGTCGATGGAGAAGGG 59.893 66.667 28.06 0.00 39.64 3.95
1077 2682 2.519377 TCAACGTGGTGTACTTCCTG 57.481 50.000 0.00 4.83 0.00 3.86
1086 2691 2.678934 TACTTCCTGAGCCGCGGT 60.679 61.111 28.70 13.92 0.00 5.68
1123 2728 1.300620 CACCTCTTCCGCGTCAACA 60.301 57.895 4.92 0.00 0.00 3.33
1163 2768 2.276740 CCTCCGGGGTACGTACCT 59.723 66.667 36.70 0.00 45.72 3.08
1164 2769 2.123428 CCTCCGGGGTACGTACCTG 61.123 68.421 36.70 29.13 45.72 4.00
1200 2815 2.030451 TCTTCTCAGATGCATCGATCCG 60.030 50.000 20.67 9.35 0.00 4.18
1217 2832 1.818060 TCCGTTTTGCATGCAGCTAAT 59.182 42.857 21.50 0.00 45.94 1.73
1231 2849 0.173255 GCTAATGGCAATGGCGTGTT 59.827 50.000 1.22 0.00 42.47 3.32
1323 2943 4.105057 TCTCCTGGGCTTACAAAAGGTAAA 59.895 41.667 0.00 0.00 41.27 2.01
1328 2948 6.091718 TGGGCTTACAAAAGGTAAACAATC 57.908 37.500 0.00 0.00 41.27 2.67
1329 2949 5.598830 TGGGCTTACAAAAGGTAAACAATCA 59.401 36.000 0.00 0.00 41.27 2.57
1330 2950 6.098409 TGGGCTTACAAAAGGTAAACAATCAA 59.902 34.615 0.00 0.00 41.27 2.57
1352 2975 5.760484 AGTTATTTGGGGTGCAATCATTT 57.240 34.783 0.00 0.00 0.00 2.32
1353 2976 6.125589 AGTTATTTGGGGTGCAATCATTTT 57.874 33.333 0.00 0.00 0.00 1.82
1363 2986 6.200808 GGGTGCAATCATTTTTGACTTTTTG 58.799 36.000 0.00 0.00 0.00 2.44
1374 2997 5.710613 TTTGACTTTTTGTTTCGGCAATC 57.289 34.783 0.00 0.00 0.00 2.67
1427 3050 5.750352 TCCTTGTACTCCTTCCGTTAATT 57.250 39.130 0.00 0.00 0.00 1.40
1455 3082 3.496884 TCGCCATTAATAATCGCCTGTTC 59.503 43.478 0.00 0.00 0.00 3.18
1476 3103 3.519510 TCAAGTGCAGGAAGTATAAGGCT 59.480 43.478 0.00 0.00 0.00 4.58
1584 3211 2.900269 GAACCCCTCCTCCCTCTCCC 62.900 70.000 0.00 0.00 0.00 4.30
1629 3256 1.691976 TCCTTGGCAGACGAGAAGAAA 59.308 47.619 0.00 0.00 31.73 2.52
2142 3772 7.312154 TGGATTCGATTTTGTCAAATTCGATT 58.688 30.769 30.62 27.73 46.22 3.34
2144 3774 8.103924 GGATTCGATTTTGTCAAATTCGATTTG 58.896 33.333 30.62 12.71 46.22 2.32
2145 3775 6.374707 TCGATTTTGTCAAATTCGATTTGC 57.625 33.333 28.36 9.67 46.96 3.68
2197 3830 0.687354 TGAACAGGAAGGTGAGGCTC 59.313 55.000 7.79 7.79 0.00 4.70
2325 3965 1.171308 CTTCCTCCGTTGGTCGTAGA 58.829 55.000 0.00 0.00 37.94 2.59
2413 4059 0.329596 GTTCTGTCTGGGATTGGGCT 59.670 55.000 0.00 0.00 0.00 5.19
2449 4131 2.721971 CTTGCGCAGTGTCCTCCTGT 62.722 60.000 11.31 0.00 32.41 4.00
2456 4138 2.523168 TGTCCTCCTGTGACGGCA 60.523 61.111 0.00 0.00 35.46 5.69
2462 4144 3.443045 CCTGTGACGGCAATGGGC 61.443 66.667 0.00 0.00 43.74 5.36
2513 4229 0.532115 TTAAGGTTAGCCCGTCGGAC 59.468 55.000 14.39 0.00 38.74 4.79
2546 4262 0.536460 TTTCGTCCTTCTTGGGCCAC 60.536 55.000 5.23 0.00 37.05 5.01
2550 4266 1.778383 TCCTTCTTGGGCCACCCTT 60.778 57.895 5.23 0.00 45.70 3.95
2551 4267 1.607467 CCTTCTTGGGCCACCCTTG 60.607 63.158 5.23 0.00 45.70 3.61
2622 4340 0.539051 GCCACACACTAGCCTGAGAT 59.461 55.000 0.00 0.00 0.00 2.75
2641 4362 7.093727 CCTGAGATAGAGTCCAAACTAACTTCA 60.094 40.741 0.00 0.00 35.28 3.02
2670 4395 1.228124 TCCAGGCCAAACGTTGAGG 60.228 57.895 5.01 14.05 0.00 3.86
2676 4401 1.574428 CCAAACGTTGAGGCCGAAG 59.426 57.895 0.00 0.00 0.00 3.79
2679 4404 1.064952 CAAACGTTGAGGCCGAAGTTT 59.935 47.619 0.00 12.41 38.38 2.66
2680 4405 0.661020 AACGTTGAGGCCGAAGTTTG 59.339 50.000 0.00 0.00 0.00 2.93
2681 4406 0.463116 ACGTTGAGGCCGAAGTTTGT 60.463 50.000 0.00 0.00 0.00 2.83
2682 4407 1.202557 ACGTTGAGGCCGAAGTTTGTA 60.203 47.619 0.00 0.00 0.00 2.41
2683 4408 1.193874 CGTTGAGGCCGAAGTTTGTAC 59.806 52.381 0.00 0.00 0.00 2.90
2684 4409 2.215196 GTTGAGGCCGAAGTTTGTACA 58.785 47.619 0.00 0.00 0.00 2.90
2685 4410 2.812011 GTTGAGGCCGAAGTTTGTACAT 59.188 45.455 0.00 0.00 0.00 2.29
2687 4412 1.659098 GAGGCCGAAGTTTGTACATCG 59.341 52.381 9.16 9.16 43.14 3.84
2706 4431 2.482326 GCAGGGCCACTTGATGTAC 58.518 57.895 6.18 0.00 0.00 2.90
2707 4432 1.032114 GCAGGGCCACTTGATGTACC 61.032 60.000 6.18 0.00 0.00 3.34
2711 4436 1.209621 GGCCACTTGATGTACCCCTA 58.790 55.000 0.00 0.00 0.00 3.53
2713 4438 2.174854 GGCCACTTGATGTACCCCTATT 59.825 50.000 0.00 0.00 0.00 1.73
2714 4439 3.214328 GCCACTTGATGTACCCCTATTG 58.786 50.000 0.00 0.00 0.00 1.90
2715 4440 3.371595 GCCACTTGATGTACCCCTATTGT 60.372 47.826 0.00 0.00 0.00 2.71
2716 4441 4.451900 CCACTTGATGTACCCCTATTGTC 58.548 47.826 0.00 0.00 0.00 3.18
2717 4442 4.164221 CCACTTGATGTACCCCTATTGTCT 59.836 45.833 0.00 0.00 0.00 3.41
2718 4443 5.360591 CACTTGATGTACCCCTATTGTCTC 58.639 45.833 0.00 0.00 0.00 3.36
2719 4444 5.030147 ACTTGATGTACCCCTATTGTCTCA 58.970 41.667 0.00 0.00 0.00 3.27
2720 4445 5.487488 ACTTGATGTACCCCTATTGTCTCAA 59.513 40.000 0.00 0.00 0.00 3.02
2721 4446 6.012858 ACTTGATGTACCCCTATTGTCTCAAA 60.013 38.462 0.00 0.00 0.00 2.69
2722 4447 6.381498 TGATGTACCCCTATTGTCTCAAAA 57.619 37.500 0.00 0.00 0.00 2.44
2723 4448 6.785076 TGATGTACCCCTATTGTCTCAAAAA 58.215 36.000 0.00 0.00 0.00 1.94
2751 4476 5.914898 AACTTAATGTACCCCTCATTTGC 57.085 39.130 0.00 0.00 36.92 3.68
2752 4477 5.193099 ACTTAATGTACCCCTCATTTGCT 57.807 39.130 0.00 0.00 36.92 3.91
2753 4478 5.193679 ACTTAATGTACCCCTCATTTGCTC 58.806 41.667 0.00 0.00 36.92 4.26
2754 4479 3.737559 AATGTACCCCTCATTTGCTCA 57.262 42.857 0.00 0.00 32.50 4.26
2755 4480 3.737559 ATGTACCCCTCATTTGCTCAA 57.262 42.857 0.00 0.00 0.00 3.02
2756 4481 3.517296 TGTACCCCTCATTTGCTCAAA 57.483 42.857 0.00 0.00 34.46 2.69
2757 4482 3.838565 TGTACCCCTCATTTGCTCAAAA 58.161 40.909 0.00 0.00 33.56 2.44
2758 4483 4.219115 TGTACCCCTCATTTGCTCAAAAA 58.781 39.130 0.00 0.00 33.56 1.94
2759 4484 4.280677 TGTACCCCTCATTTGCTCAAAAAG 59.719 41.667 0.00 1.19 33.56 2.27
2760 4485 3.575805 ACCCCTCATTTGCTCAAAAAGA 58.424 40.909 0.00 0.97 33.56 2.52
2761 4486 3.966665 ACCCCTCATTTGCTCAAAAAGAA 59.033 39.130 0.00 0.00 33.56 2.52
2762 4487 4.408596 ACCCCTCATTTGCTCAAAAAGAAA 59.591 37.500 0.00 0.00 33.56 2.52
2763 4488 5.104569 ACCCCTCATTTGCTCAAAAAGAAAA 60.105 36.000 0.00 0.00 36.92 2.29
2764 4489 5.821995 CCCCTCATTTGCTCAAAAAGAAAAA 59.178 36.000 0.00 0.00 36.07 1.94
2785 4510 4.836125 AAAGAACTTGATGCATTCGTGT 57.164 36.364 0.00 0.00 0.00 4.49
2786 4511 4.836125 AAGAACTTGATGCATTCGTGTT 57.164 36.364 0.00 4.39 0.00 3.32
2846 4572 6.582295 TCAGTTCAAAGATTTATTTTGCGAGC 59.418 34.615 0.00 0.00 35.90 5.03
2865 4591 5.305036 CGAGCAAATTAATTTTTGAACGCC 58.695 37.500 10.77 4.56 38.58 5.68
2866 4592 5.118510 CGAGCAAATTAATTTTTGAACGCCT 59.881 36.000 10.77 1.76 38.58 5.52
2867 4593 6.346518 CGAGCAAATTAATTTTTGAACGCCTT 60.347 34.615 10.77 0.00 38.58 4.35
2869 4595 7.702386 AGCAAATTAATTTTTGAACGCCTTTT 58.298 26.923 10.77 0.00 38.58 2.27
2870 4596 8.187480 AGCAAATTAATTTTTGAACGCCTTTTT 58.813 25.926 10.77 0.00 38.58 1.94
2893 4619 7.568199 TTTTGCGGGGAAAATTAATTTTTGA 57.432 28.000 23.44 5.69 39.86 2.69
2894 4620 7.568199 TTTGCGGGGAAAATTAATTTTTGAA 57.432 28.000 23.44 9.29 39.86 2.69
2895 4621 7.568199 TTGCGGGGAAAATTAATTTTTGAAA 57.432 28.000 23.44 13.56 39.86 2.69
2896 4622 7.195839 TGCGGGGAAAATTAATTTTTGAAAG 57.804 32.000 23.44 15.80 39.86 2.62
2897 4623 6.083630 GCGGGGAAAATTAATTTTTGAAAGC 58.916 36.000 23.44 19.98 39.86 3.51
2898 4624 6.072728 GCGGGGAAAATTAATTTTTGAAAGCT 60.073 34.615 23.44 2.84 39.86 3.74
2899 4625 7.297391 CGGGGAAAATTAATTTTTGAAAGCTG 58.703 34.615 23.44 8.28 39.86 4.24
2900 4626 7.172361 CGGGGAAAATTAATTTTTGAAAGCTGA 59.828 33.333 23.44 0.00 39.86 4.26
2901 4627 9.013229 GGGGAAAATTAATTTTTGAAAGCTGAT 57.987 29.630 23.44 1.01 39.86 2.90
2902 4628 9.830294 GGGAAAATTAATTTTTGAAAGCTGATG 57.170 29.630 23.44 0.00 39.86 3.07
2941 4667 1.659098 CACGAGCAACGATCTTAACCC 59.341 52.381 10.05 0.00 45.77 4.11
2945 4671 2.678336 GAGCAACGATCTTAACCCCTTG 59.322 50.000 0.00 0.00 0.00 3.61
3077 4803 2.046023 CCACATGAGGAGCGCCAA 60.046 61.111 9.88 0.00 36.29 4.52
3093 4819 1.339151 GCCAAGACCGACAATTCCTCT 60.339 52.381 0.00 0.00 0.00 3.69
3148 4874 5.420104 ACTCAGTAGTGATGTGATGTGATCA 59.580 40.000 0.00 0.00 33.57 2.92
3193 4920 1.011968 TGTAGGTGCGTGCGAATGAC 61.012 55.000 0.00 0.00 0.00 3.06
3215 4942 4.407296 ACTTTGGAATTGTTTAGGTTGGCA 59.593 37.500 0.00 0.00 0.00 4.92
3224 4951 9.301153 GAATTGTTTAGGTTGGCATTTATACAG 57.699 33.333 0.00 0.00 0.00 2.74
3266 4997 3.329386 TCTTGCTTCTATGTGTGTGAGC 58.671 45.455 0.00 0.00 0.00 4.26
3309 5040 2.038952 TGCTCTAGTCCACAAGCACAAT 59.961 45.455 0.00 0.00 39.69 2.71
3398 5248 0.535335 CCTTTACTGCTCCGCCACTA 59.465 55.000 0.00 0.00 0.00 2.74
3433 5285 4.543692 CAAGACCATCTTGCTCAACAAAG 58.456 43.478 5.67 0.00 46.03 2.77
3434 5286 3.825328 AGACCATCTTGCTCAACAAAGT 58.175 40.909 0.00 0.00 37.96 2.66
3435 5287 3.567164 AGACCATCTTGCTCAACAAAGTG 59.433 43.478 0.00 0.00 37.96 3.16
3436 5288 3.290710 ACCATCTTGCTCAACAAAGTGT 58.709 40.909 0.00 0.00 37.96 3.55
3437 5289 3.316308 ACCATCTTGCTCAACAAAGTGTC 59.684 43.478 0.00 0.00 37.96 3.67
3438 5290 3.548587 CATCTTGCTCAACAAAGTGTCG 58.451 45.455 0.00 0.00 37.96 4.35
3439 5291 1.330521 TCTTGCTCAACAAAGTGTCGC 59.669 47.619 0.00 0.00 37.96 5.19
3440 5292 1.331756 CTTGCTCAACAAAGTGTCGCT 59.668 47.619 0.00 0.00 37.96 4.93
3442 5294 1.330521 TGCTCAACAAAGTGTCGCTTC 59.669 47.619 0.00 0.00 36.17 3.86
3548 5400 2.043248 GAGGCCGGTCAGGTAGGA 60.043 66.667 9.71 0.00 43.70 2.94
3662 5514 3.745975 CGAGAAACATGAAGCTGGTGTTA 59.254 43.478 0.00 0.00 35.19 2.41
3722 5574 6.038271 ACTTTCATAAAAGCGAGTTGTTCTGT 59.962 34.615 0.00 0.00 44.82 3.41
3822 5674 8.751215 TTACCTAGGTATACCCATTCATCATT 57.249 34.615 22.36 0.00 36.42 2.57
3906 5758 4.843728 CTGGAAGGGCAAACTTATGTCTA 58.156 43.478 0.00 0.00 0.00 2.59
3953 5805 0.391661 CGGTGCTCACAAGTATGCCT 60.392 55.000 2.21 0.00 0.00 4.75
3971 5823 9.160412 AGTATGCCTATGTTCCTACTATCTTTT 57.840 33.333 0.00 0.00 0.00 2.27
4075 5927 5.422214 AAGTATAGACTCACAAAGTGGGG 57.578 43.478 1.73 0.00 38.53 4.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.965902 ACATACAACTTATCTTTCTCCTTGATT 57.034 29.630 0.00 0.00 0.00 2.57
11 12 9.838339 CCCTCAATACATACAACTTATCTTTCT 57.162 33.333 0.00 0.00 0.00 2.52
12 13 9.057089 CCCCTCAATACATACAACTTATCTTTC 57.943 37.037 0.00 0.00 0.00 2.62
13 14 8.557450 ACCCCTCAATACATACAACTTATCTTT 58.443 33.333 0.00 0.00 0.00 2.52
14 15 8.102484 ACCCCTCAATACATACAACTTATCTT 57.898 34.615 0.00 0.00 0.00 2.40
15 16 7.691993 ACCCCTCAATACATACAACTTATCT 57.308 36.000 0.00 0.00 0.00 1.98
16 17 7.444487 GGAACCCCTCAATACATACAACTTATC 59.556 40.741 0.00 0.00 0.00 1.75
17 18 7.128883 AGGAACCCCTCAATACATACAACTTAT 59.871 37.037 0.00 0.00 38.86 1.73
18 19 6.445786 AGGAACCCCTCAATACATACAACTTA 59.554 38.462 0.00 0.00 38.86 2.24
19 20 5.253096 AGGAACCCCTCAATACATACAACTT 59.747 40.000 0.00 0.00 38.86 2.66
20 21 4.788617 AGGAACCCCTCAATACATACAACT 59.211 41.667 0.00 0.00 38.86 3.16
21 22 5.112129 AGGAACCCCTCAATACATACAAC 57.888 43.478 0.00 0.00 38.86 3.32
22 23 5.491078 AGAAGGAACCCCTCAATACATACAA 59.509 40.000 0.00 0.00 43.48 2.41
23 24 5.036916 AGAAGGAACCCCTCAATACATACA 58.963 41.667 0.00 0.00 43.48 2.29
24 25 5.632034 AGAAGGAACCCCTCAATACATAC 57.368 43.478 0.00 0.00 43.48 2.39
25 26 6.449956 ACTAGAAGGAACCCCTCAATACATA 58.550 40.000 0.00 0.00 43.48 2.29
26 27 5.289510 ACTAGAAGGAACCCCTCAATACAT 58.710 41.667 0.00 0.00 43.48 2.29
27 28 4.695606 ACTAGAAGGAACCCCTCAATACA 58.304 43.478 0.00 0.00 43.48 2.29
28 29 5.695424 AACTAGAAGGAACCCCTCAATAC 57.305 43.478 0.00 0.00 43.48 1.89
29 30 6.713731 AAAACTAGAAGGAACCCCTCAATA 57.286 37.500 0.00 0.00 43.48 1.90
30 31 5.600669 AAAACTAGAAGGAACCCCTCAAT 57.399 39.130 0.00 0.00 43.48 2.57
31 32 6.273730 TGATAAAACTAGAAGGAACCCCTCAA 59.726 38.462 0.00 0.00 43.48 3.02
32 33 5.788533 TGATAAAACTAGAAGGAACCCCTCA 59.211 40.000 0.00 0.00 43.48 3.86
33 34 6.309389 TGATAAAACTAGAAGGAACCCCTC 57.691 41.667 0.00 0.00 43.48 4.30
35 36 6.482524 ACTTGATAAAACTAGAAGGAACCCC 58.517 40.000 0.00 0.00 0.00 4.95
36 37 7.120873 GGAACTTGATAAAACTAGAAGGAACCC 59.879 40.741 0.00 0.00 0.00 4.11
37 38 7.883833 AGGAACTTGATAAAACTAGAAGGAACC 59.116 37.037 0.00 0.00 27.25 3.62
38 39 8.722394 CAGGAACTTGATAAAACTAGAAGGAAC 58.278 37.037 0.00 0.00 34.60 3.62
39 40 8.656806 TCAGGAACTTGATAAAACTAGAAGGAA 58.343 33.333 0.00 0.00 34.60 3.36
40 41 8.202461 TCAGGAACTTGATAAAACTAGAAGGA 57.798 34.615 0.00 0.00 34.60 3.36
41 42 9.454859 AATCAGGAACTTGATAAAACTAGAAGG 57.545 33.333 0.00 0.00 34.60 3.46
43 44 9.231297 CCAATCAGGAACTTGATAAAACTAGAA 57.769 33.333 0.00 0.00 41.22 2.10
44 45 8.602424 TCCAATCAGGAACTTGATAAAACTAGA 58.398 33.333 0.00 0.00 45.65 2.43
45 46 8.792830 TCCAATCAGGAACTTGATAAAACTAG 57.207 34.615 0.18 0.00 45.65 2.57
60 61 1.202915 TGCAGCAAACTCCAATCAGGA 60.203 47.619 0.00 0.00 46.75 3.86
61 62 1.250328 TGCAGCAAACTCCAATCAGG 58.750 50.000 0.00 0.00 39.47 3.86
62 63 2.295349 AGTTGCAGCAAACTCCAATCAG 59.705 45.455 10.11 0.00 35.44 2.90
63 64 2.034939 CAGTTGCAGCAAACTCCAATCA 59.965 45.455 10.11 0.00 38.34 2.57
64 65 2.294233 TCAGTTGCAGCAAACTCCAATC 59.706 45.455 10.11 0.00 38.34 2.67
65 66 2.309613 TCAGTTGCAGCAAACTCCAAT 58.690 42.857 10.11 0.00 38.34 3.16
66 67 1.761449 TCAGTTGCAGCAAACTCCAA 58.239 45.000 10.11 0.00 38.34 3.53
67 68 1.677576 CTTCAGTTGCAGCAAACTCCA 59.322 47.619 10.11 0.00 38.34 3.86
68 69 1.601412 GCTTCAGTTGCAGCAAACTCC 60.601 52.381 10.11 0.00 38.34 3.85
69 70 1.763634 GCTTCAGTTGCAGCAAACTC 58.236 50.000 10.11 0.00 38.34 3.01
70 71 0.029834 CGCTTCAGTTGCAGCAAACT 59.970 50.000 10.11 6.90 41.08 2.66
71 72 0.029300 TCGCTTCAGTTGCAGCAAAC 59.971 50.000 10.11 4.51 33.92 2.93
72 73 0.953727 ATCGCTTCAGTTGCAGCAAA 59.046 45.000 10.11 0.00 33.92 3.68
73 74 0.953727 AATCGCTTCAGTTGCAGCAA 59.046 45.000 2.83 2.83 33.92 3.91
74 75 0.518636 GAATCGCTTCAGTTGCAGCA 59.481 50.000 2.55 0.00 33.92 4.41
75 76 0.518636 TGAATCGCTTCAGTTGCAGC 59.481 50.000 0.00 0.00 36.46 5.25
76 77 2.477357 CCATGAATCGCTTCAGTTGCAG 60.477 50.000 7.83 0.00 44.32 4.41
77 78 1.469703 CCATGAATCGCTTCAGTTGCA 59.530 47.619 7.83 0.00 44.32 4.08
78 79 1.202222 CCCATGAATCGCTTCAGTTGC 60.202 52.381 7.83 0.00 44.32 4.17
79 80 2.086869 ACCCATGAATCGCTTCAGTTG 58.913 47.619 7.83 2.12 44.32 3.16
80 81 2.086869 CACCCATGAATCGCTTCAGTT 58.913 47.619 7.83 0.00 44.32 3.16
81 82 1.742761 CACCCATGAATCGCTTCAGT 58.257 50.000 7.83 0.00 44.32 3.41
82 83 0.379669 GCACCCATGAATCGCTTCAG 59.620 55.000 7.83 0.00 44.32 3.02
83 84 0.322366 TGCACCCATGAATCGCTTCA 60.322 50.000 3.88 3.88 45.15 3.02
84 85 0.099436 GTGCACCCATGAATCGCTTC 59.901 55.000 5.22 0.00 0.00 3.86
85 86 0.608856 TGTGCACCCATGAATCGCTT 60.609 50.000 15.69 0.00 0.00 4.68
86 87 0.394762 ATGTGCACCCATGAATCGCT 60.395 50.000 15.69 0.00 0.00 4.93
87 88 0.457035 AATGTGCACCCATGAATCGC 59.543 50.000 15.69 0.00 0.00 4.58
88 89 1.744522 TGAATGTGCACCCATGAATCG 59.255 47.619 15.69 0.00 0.00 3.34
89 90 3.194116 AGTTGAATGTGCACCCATGAATC 59.806 43.478 15.69 0.00 0.00 2.52
90 91 3.056393 CAGTTGAATGTGCACCCATGAAT 60.056 43.478 15.69 0.00 0.00 2.57
91 92 2.296752 CAGTTGAATGTGCACCCATGAA 59.703 45.455 15.69 0.00 0.00 2.57
92 93 1.887854 CAGTTGAATGTGCACCCATGA 59.112 47.619 15.69 0.00 0.00 3.07
93 94 1.887854 TCAGTTGAATGTGCACCCATG 59.112 47.619 15.69 6.35 0.00 3.66
94 95 2.291209 TCAGTTGAATGTGCACCCAT 57.709 45.000 15.69 0.00 0.00 4.00
95 96 2.291209 ATCAGTTGAATGTGCACCCA 57.709 45.000 15.69 6.99 0.00 4.51
96 97 3.347216 ACTATCAGTTGAATGTGCACCC 58.653 45.455 15.69 4.16 0.00 4.61
108 109 9.547753 AATCTTACATAATCGCAACTATCAGTT 57.452 29.630 0.00 0.00 39.39 3.16
109 110 9.197694 GAATCTTACATAATCGCAACTATCAGT 57.802 33.333 0.00 0.00 0.00 3.41
110 111 9.196552 TGAATCTTACATAATCGCAACTATCAG 57.803 33.333 0.00 0.00 0.00 2.90
111 112 9.196552 CTGAATCTTACATAATCGCAACTATCA 57.803 33.333 0.00 0.00 0.00 2.15
112 113 8.165428 GCTGAATCTTACATAATCGCAACTATC 58.835 37.037 0.00 0.00 0.00 2.08
113 114 7.875041 AGCTGAATCTTACATAATCGCAACTAT 59.125 33.333 0.00 0.00 0.00 2.12
114 115 7.210174 AGCTGAATCTTACATAATCGCAACTA 58.790 34.615 0.00 0.00 0.00 2.24
115 116 6.051717 AGCTGAATCTTACATAATCGCAACT 58.948 36.000 0.00 0.00 0.00 3.16
116 117 6.292389 AGCTGAATCTTACATAATCGCAAC 57.708 37.500 0.00 0.00 0.00 4.17
117 118 6.925610 AAGCTGAATCTTACATAATCGCAA 57.074 33.333 0.00 0.00 0.00 4.85
118 119 6.316140 ACAAAGCTGAATCTTACATAATCGCA 59.684 34.615 0.00 0.00 0.00 5.10
119 120 6.719365 ACAAAGCTGAATCTTACATAATCGC 58.281 36.000 0.00 0.00 0.00 4.58
120 121 9.214953 GAAACAAAGCTGAATCTTACATAATCG 57.785 33.333 0.00 0.00 0.00 3.34
121 122 9.508567 GGAAACAAAGCTGAATCTTACATAATC 57.491 33.333 0.00 0.00 0.00 1.75
122 123 9.247861 AGGAAACAAAGCTGAATCTTACATAAT 57.752 29.630 0.00 0.00 0.00 1.28
123 124 8.635765 AGGAAACAAAGCTGAATCTTACATAA 57.364 30.769 0.00 0.00 0.00 1.90
124 125 8.635765 AAGGAAACAAAGCTGAATCTTACATA 57.364 30.769 0.00 0.00 0.00 2.29
125 126 7.530426 AAGGAAACAAAGCTGAATCTTACAT 57.470 32.000 0.00 0.00 0.00 2.29
126 127 6.959639 AAGGAAACAAAGCTGAATCTTACA 57.040 33.333 0.00 0.00 0.00 2.41
127 128 6.144563 GCAAAGGAAACAAAGCTGAATCTTAC 59.855 38.462 0.00 0.00 0.00 2.34
128 129 6.040842 AGCAAAGGAAACAAAGCTGAATCTTA 59.959 34.615 0.00 0.00 32.64 2.10
129 130 5.052481 GCAAAGGAAACAAAGCTGAATCTT 58.948 37.500 0.00 0.00 0.00 2.40
130 131 4.343239 AGCAAAGGAAACAAAGCTGAATCT 59.657 37.500 0.00 0.00 32.64 2.40
131 132 4.446719 CAGCAAAGGAAACAAAGCTGAATC 59.553 41.667 6.38 0.00 46.58 2.52
132 133 4.141869 ACAGCAAAGGAAACAAAGCTGAAT 60.142 37.500 17.80 0.00 46.58 2.57
133 134 3.195396 ACAGCAAAGGAAACAAAGCTGAA 59.805 39.130 17.80 0.00 46.58 3.02
134 135 2.760092 ACAGCAAAGGAAACAAAGCTGA 59.240 40.909 17.80 0.00 46.58 4.26
135 136 8.183360 ATCCTACAGCAAAGGAAACAAAGCTG 62.183 42.308 10.33 10.33 46.06 4.24
136 137 3.319122 CCTACAGCAAAGGAAACAAAGCT 59.681 43.478 0.00 0.00 36.08 3.74
137 138 3.317993 TCCTACAGCAAAGGAAACAAAGC 59.682 43.478 0.00 0.00 40.23 3.51
138 139 5.712152 ATCCTACAGCAAAGGAAACAAAG 57.288 39.130 5.88 0.00 46.06 2.77
139 140 5.010617 GGAATCCTACAGCAAAGGAAACAAA 59.989 40.000 5.88 0.00 46.06 2.83
140 141 4.522789 GGAATCCTACAGCAAAGGAAACAA 59.477 41.667 5.88 0.00 46.06 2.83
141 142 4.079253 GGAATCCTACAGCAAAGGAAACA 58.921 43.478 5.88 0.00 46.06 2.83
142 143 4.079253 TGGAATCCTACAGCAAAGGAAAC 58.921 43.478 0.00 3.93 46.06 2.78
143 144 4.380843 TGGAATCCTACAGCAAAGGAAA 57.619 40.909 0.00 0.00 46.06 3.13
144 145 4.380843 TTGGAATCCTACAGCAAAGGAA 57.619 40.909 0.00 0.00 46.06 3.36
145 146 4.380843 TTTGGAATCCTACAGCAAAGGA 57.619 40.909 0.00 4.41 46.96 3.36
146 147 5.665916 AATTTGGAATCCTACAGCAAAGG 57.334 39.130 0.00 0.00 35.26 3.11
147 148 7.799784 CAAAAATTTGGAATCCTACAGCAAAG 58.200 34.615 0.00 0.00 34.59 2.77
148 149 7.727331 CAAAAATTTGGAATCCTACAGCAAA 57.273 32.000 0.00 0.00 34.59 3.68
190 191 9.680315 GCATGATCCAAATTTTGAAATTTTGAA 57.320 25.926 20.56 6.73 43.91 2.69
191 192 9.069082 AGCATGATCCAAATTTTGAAATTTTGA 57.931 25.926 20.56 15.37 43.91 2.69
192 193 9.685828 AAGCATGATCCAAATTTTGAAATTTTG 57.314 25.926 14.86 14.86 43.91 2.44
195 196 9.902196 GAAAAGCATGATCCAAATTTTGAAATT 57.098 25.926 10.72 0.00 40.15 1.82
196 197 8.231837 CGAAAAGCATGATCCAAATTTTGAAAT 58.768 29.630 10.72 4.04 0.00 2.17
197 198 7.574496 CGAAAAGCATGATCCAAATTTTGAAA 58.426 30.769 10.72 0.00 0.00 2.69
198 199 7.119605 CGAAAAGCATGATCCAAATTTTGAA 57.880 32.000 10.72 0.00 0.00 2.69
199 200 6.709145 CGAAAAGCATGATCCAAATTTTGA 57.291 33.333 10.72 0.00 0.00 2.69
216 217 1.202031 CGGAAAATCTCGGGCGAAAAG 60.202 52.381 0.00 0.00 0.00 2.27
217 218 0.800012 CGGAAAATCTCGGGCGAAAA 59.200 50.000 0.00 0.00 0.00 2.29
218 219 0.037139 TCGGAAAATCTCGGGCGAAA 60.037 50.000 0.00 0.00 0.00 3.46
219 220 0.037139 TTCGGAAAATCTCGGGCGAA 60.037 50.000 0.00 0.00 0.00 4.70
220 221 0.037139 TTTCGGAAAATCTCGGGCGA 60.037 50.000 0.00 0.00 0.00 5.54
221 222 0.800012 TTTTCGGAAAATCTCGGGCG 59.200 50.000 11.68 0.00 0.00 6.13
222 223 3.503827 ATTTTTCGGAAAATCTCGGGC 57.496 42.857 15.97 0.00 40.54 6.13
223 224 4.862574 GGAAATTTTTCGGAAAATCTCGGG 59.137 41.667 14.72 0.00 42.97 5.14
224 225 4.557301 CGGAAATTTTTCGGAAAATCTCGG 59.443 41.667 14.72 11.00 42.97 4.63
225 226 5.387279 TCGGAAATTTTTCGGAAAATCTCG 58.613 37.500 14.72 16.61 42.97 4.04
233 234 4.392445 TCGCTATTTCGGAAATTTTTCGGA 59.608 37.500 20.04 6.88 42.39 4.55
234 235 4.654015 TCGCTATTTCGGAAATTTTTCGG 58.346 39.130 20.04 4.72 38.06 4.30
235 236 6.790336 ATTCGCTATTTCGGAAATTTTTCG 57.210 33.333 20.04 16.55 38.06 3.46
255 256 1.470890 TGGACGAAATGGGCGAAATTC 59.529 47.619 0.00 0.00 0.00 2.17
256 257 1.472480 CTGGACGAAATGGGCGAAATT 59.528 47.619 0.00 0.00 0.00 1.82
257 258 1.094785 CTGGACGAAATGGGCGAAAT 58.905 50.000 0.00 0.00 0.00 2.17
258 259 0.958382 CCTGGACGAAATGGGCGAAA 60.958 55.000 0.00 0.00 0.00 3.46
259 260 1.376683 CCTGGACGAAATGGGCGAA 60.377 57.895 0.00 0.00 0.00 4.70
260 261 2.267642 CCTGGACGAAATGGGCGA 59.732 61.111 0.00 0.00 0.00 5.54
261 262 2.824041 CCCTGGACGAAATGGGCG 60.824 66.667 0.00 0.00 32.49 6.13
262 263 1.749258 GTCCCTGGACGAAATGGGC 60.749 63.158 0.00 0.00 39.49 5.36
263 264 4.637771 GTCCCTGGACGAAATGGG 57.362 61.111 0.00 0.00 40.95 4.00
271 272 2.490509 CCAAAATTTACCGTCCCTGGAC 59.509 50.000 6.24 6.24 41.40 4.02
272 273 2.375845 TCCAAAATTTACCGTCCCTGGA 59.624 45.455 0.00 0.79 0.00 3.86
273 274 2.797786 TCCAAAATTTACCGTCCCTGG 58.202 47.619 0.00 0.00 0.00 4.45
274 275 4.857509 TTTCCAAAATTTACCGTCCCTG 57.142 40.909 0.00 0.00 0.00 4.45
275 276 4.261698 CGTTTTCCAAAATTTACCGTCCCT 60.262 41.667 0.00 0.00 0.00 4.20
276 277 3.982701 CGTTTTCCAAAATTTACCGTCCC 59.017 43.478 0.00 0.00 0.00 4.46
277 278 4.857799 TCGTTTTCCAAAATTTACCGTCC 58.142 39.130 0.00 0.00 0.00 4.79
278 279 6.809297 TTTCGTTTTCCAAAATTTACCGTC 57.191 33.333 0.00 0.00 0.00 4.79
279 280 6.421501 GGATTTCGTTTTCCAAAATTTACCGT 59.578 34.615 0.00 0.00 31.99 4.83
280 281 6.421202 TGGATTTCGTTTTCCAAAATTTACCG 59.579 34.615 0.00 0.00 39.05 4.02
281 282 7.716768 TGGATTTCGTTTTCCAAAATTTACC 57.283 32.000 0.00 0.00 39.05 2.85
290 291 6.578023 ACAAGATTTTGGATTTCGTTTTCCA 58.422 32.000 0.57 0.00 40.24 3.53
291 292 6.923508 AGACAAGATTTTGGATTTCGTTTTCC 59.076 34.615 0.57 0.00 38.66 3.13
292 293 7.435192 ACAGACAAGATTTTGGATTTCGTTTTC 59.565 33.333 0.57 0.00 38.66 2.29
293 294 7.264947 ACAGACAAGATTTTGGATTTCGTTTT 58.735 30.769 0.57 0.00 38.66 2.43
294 295 6.805713 ACAGACAAGATTTTGGATTTCGTTT 58.194 32.000 0.57 0.00 38.66 3.60
295 296 6.391227 ACAGACAAGATTTTGGATTTCGTT 57.609 33.333 0.57 0.00 38.66 3.85
296 297 6.710744 AGTACAGACAAGATTTTGGATTTCGT 59.289 34.615 0.57 0.00 38.66 3.85
297 298 7.017645 CAGTACAGACAAGATTTTGGATTTCG 58.982 38.462 0.57 0.00 38.66 3.46
298 299 7.805071 CACAGTACAGACAAGATTTTGGATTTC 59.195 37.037 0.57 0.00 38.66 2.17
299 300 7.285401 ACACAGTACAGACAAGATTTTGGATTT 59.715 33.333 0.57 0.00 38.66 2.17
300 301 6.772716 ACACAGTACAGACAAGATTTTGGATT 59.227 34.615 0.57 0.00 38.66 3.01
301 302 6.299141 ACACAGTACAGACAAGATTTTGGAT 58.701 36.000 0.57 0.00 38.66 3.41
302 303 5.680619 ACACAGTACAGACAAGATTTTGGA 58.319 37.500 0.57 0.00 38.66 3.53
303 304 6.377327 AACACAGTACAGACAAGATTTTGG 57.623 37.500 0.57 0.00 38.66 3.28
304 305 9.781834 TTAAAACACAGTACAGACAAGATTTTG 57.218 29.630 0.00 0.00 40.24 2.44
332 333 6.089249 AGAATTCCAATTGCGAGTTCTTTT 57.911 33.333 19.58 7.29 33.87 2.27
336 337 7.430502 CAGAAATAGAATTCCAATTGCGAGTTC 59.569 37.037 17.02 17.02 0.00 3.01
337 338 7.253422 CAGAAATAGAATTCCAATTGCGAGTT 58.747 34.615 0.65 2.40 0.00 3.01
338 339 6.183360 CCAGAAATAGAATTCCAATTGCGAGT 60.183 38.462 0.65 0.00 0.00 4.18
339 340 6.038603 TCCAGAAATAGAATTCCAATTGCGAG 59.961 38.462 0.65 0.91 0.00 5.03
340 341 5.885352 TCCAGAAATAGAATTCCAATTGCGA 59.115 36.000 0.65 0.00 0.00 5.10
341 342 5.973565 GTCCAGAAATAGAATTCCAATTGCG 59.026 40.000 0.65 0.00 0.00 4.85
342 343 6.976925 CAGTCCAGAAATAGAATTCCAATTGC 59.023 38.462 0.65 1.59 0.00 3.56
343 344 8.059798 ACAGTCCAGAAATAGAATTCCAATTG 57.940 34.615 0.65 0.00 0.00 2.32
344 345 7.066284 CGACAGTCCAGAAATAGAATTCCAATT 59.934 37.037 0.65 0.00 0.00 2.32
346 347 5.874810 CGACAGTCCAGAAATAGAATTCCAA 59.125 40.000 0.65 0.00 0.00 3.53
347 348 5.419542 CGACAGTCCAGAAATAGAATTCCA 58.580 41.667 0.65 0.00 0.00 3.53
348 349 4.811557 CCGACAGTCCAGAAATAGAATTCC 59.188 45.833 0.65 0.00 0.00 3.01
349 350 4.271291 GCCGACAGTCCAGAAATAGAATTC 59.729 45.833 0.00 0.00 0.00 2.17
360 361 0.320683 TCAACATGCCGACAGTCCAG 60.321 55.000 0.00 0.00 0.00 3.86
365 366 3.426695 GGAAAAGATCAACATGCCGACAG 60.427 47.826 0.00 0.00 0.00 3.51
374 375 8.640651 TCAATTCAATCAAGGAAAAGATCAACA 58.359 29.630 0.00 0.00 0.00 3.33
431 437 2.186891 CGCGGTATGTTGTACGATTGA 58.813 47.619 0.00 0.00 0.00 2.57
432 438 1.331680 GCGCGGTATGTTGTACGATTG 60.332 52.381 8.83 0.00 0.00 2.67
433 439 0.925466 GCGCGGTATGTTGTACGATT 59.075 50.000 8.83 0.00 0.00 3.34
434 440 1.204228 CGCGCGGTATGTTGTACGAT 61.204 55.000 24.84 0.00 0.00 3.73
436 442 2.611365 CGCGCGGTATGTTGTACG 59.389 61.111 24.84 0.00 0.00 3.67
437 443 3.000266 CCGCGCGGTATGTTGTAC 59.000 61.111 39.71 0.00 0.00 2.90
438 444 2.886604 GCCGCGCGGTATGTTGTA 60.887 61.111 45.02 0.00 37.65 2.41
440 446 4.222589 CTGCCGCGCGGTATGTTG 62.223 66.667 45.02 27.73 37.65 3.33
457 463 1.166531 AGAGGTTTGCTTGTCACGCC 61.167 55.000 0.00 0.00 0.00 5.68
458 464 0.235926 GAGAGGTTTGCTTGTCACGC 59.764 55.000 0.00 0.00 0.00 5.34
459 465 1.581934 TGAGAGGTTTGCTTGTCACG 58.418 50.000 0.00 0.00 0.00 4.35
473 479 5.410067 TCTTTTTGTTGCTTGGTTTGAGAG 58.590 37.500 0.00 0.00 0.00 3.20
474 480 5.398603 TCTTTTTGTTGCTTGGTTTGAGA 57.601 34.783 0.00 0.00 0.00 3.27
495 501 0.653636 TCGTTGCACGGTTTGAGTTC 59.346 50.000 8.46 0.00 42.81 3.01
555 570 7.095355 CCGTGCCACATTCCTTACTTATAATAC 60.095 40.741 0.00 0.00 0.00 1.89
659 2223 0.827507 GAGAGGGGCTGGCTCTAGAG 60.828 65.000 15.85 15.85 0.00 2.43
660 2224 1.231641 GAGAGGGGCTGGCTCTAGA 59.768 63.158 2.52 0.00 0.00 2.43
662 2226 1.966148 ATGGAGAGGGGCTGGCTCTA 61.966 60.000 2.52 0.00 0.00 2.43
663 2227 3.344511 ATGGAGAGGGGCTGGCTCT 62.345 63.158 1.98 1.98 0.00 4.09
664 2228 2.771762 ATGGAGAGGGGCTGGCTC 60.772 66.667 0.00 0.00 0.00 4.70
665 2229 2.771762 GATGGAGAGGGGCTGGCT 60.772 66.667 0.00 0.00 0.00 4.75
666 2230 2.771762 AGATGGAGAGGGGCTGGC 60.772 66.667 0.00 0.00 0.00 4.85
668 2232 0.767446 ATGGAGATGGAGAGGGGCTG 60.767 60.000 0.00 0.00 0.00 4.85
669 2233 0.870313 TATGGAGATGGAGAGGGGCT 59.130 55.000 0.00 0.00 0.00 5.19
670 2234 1.963985 ATATGGAGATGGAGAGGGGC 58.036 55.000 0.00 0.00 0.00 5.80
671 2235 6.905776 AGTATTTATATGGAGATGGAGAGGGG 59.094 42.308 0.00 0.00 0.00 4.79
672 2236 7.986553 AGTATTTATATGGAGATGGAGAGGG 57.013 40.000 0.00 0.00 0.00 4.30
673 2237 9.707957 ACTAGTATTTATATGGAGATGGAGAGG 57.292 37.037 0.00 0.00 0.00 3.69
703 2267 1.409521 CGGCCAAGGATTACAATGGGA 60.410 52.381 2.24 0.00 33.45 4.37
709 2273 1.153449 CTCGCGGCCAAGGATTACA 60.153 57.895 6.13 0.00 0.00 2.41
718 2304 3.849951 GGGAATCTCTCGCGGCCA 61.850 66.667 6.13 0.00 0.00 5.36
743 2329 3.571590 ACTCCTGGTGAGATGGATAGTC 58.428 50.000 2.23 0.00 44.42 2.59
752 2338 1.610673 GGCCTGACTCCTGGTGAGA 60.611 63.158 2.23 0.00 44.42 3.27
755 2341 3.721706 GGGGCCTGACTCCTGGTG 61.722 72.222 0.84 0.00 34.26 4.17
796 2386 3.918220 GCTCGAGATGCGGCGTTG 61.918 66.667 18.75 0.00 41.33 4.10
873 2478 3.545124 TTGTGTGTAGGCCGGCAGG 62.545 63.158 30.85 0.00 41.62 4.85
884 2489 2.717390 TGGCTAACAGTTGTTGTGTGT 58.283 42.857 7.73 0.00 40.74 3.72
889 2494 5.687285 GTGAATCTTTGGCTAACAGTTGTTG 59.313 40.000 7.73 0.06 38.90 3.33
899 2504 1.678728 CCAGGCGTGAATCTTTGGCTA 60.679 52.381 8.24 0.00 35.25 3.93
960 2565 2.029904 GAACAAGGAGAGCGCGATGC 62.030 60.000 12.10 0.00 46.98 3.91
963 2568 1.816863 AAGGAACAAGGAGAGCGCGA 61.817 55.000 12.10 0.00 0.00 5.87
994 2599 2.032860 ATGCCCTTCTCCATCGACGG 62.033 60.000 0.00 0.00 0.00 4.79
1010 2615 2.359900 CCTTGTTGTAGGAGTCCATGC 58.640 52.381 12.86 1.18 37.50 4.06
1163 2768 0.546267 AAGAAGAGGAGGAGGCAGCA 60.546 55.000 0.00 0.00 0.00 4.41
1164 2769 0.177836 GAAGAAGAGGAGGAGGCAGC 59.822 60.000 0.00 0.00 0.00 5.25
1200 2815 1.662122 GCCATTAGCTGCATGCAAAAC 59.338 47.619 22.88 13.97 45.94 2.43
1231 2849 3.555547 CACATCTGAATTAATCGACGGCA 59.444 43.478 0.00 0.00 0.00 5.69
1323 2943 3.900601 TGCACCCCAAATAACTTGATTGT 59.099 39.130 0.00 0.00 37.17 2.71
1328 2948 4.533919 TGATTGCACCCCAAATAACTTG 57.466 40.909 0.00 0.00 36.92 3.16
1329 2949 5.760484 AATGATTGCACCCCAAATAACTT 57.240 34.783 0.00 0.00 36.92 2.66
1330 2950 5.760484 AAATGATTGCACCCCAAATAACT 57.240 34.783 0.00 0.00 36.92 2.24
1352 2975 5.415221 AGATTGCCGAAACAAAAAGTCAAA 58.585 33.333 0.00 0.00 32.27 2.69
1353 2976 5.004922 AGATTGCCGAAACAAAAAGTCAA 57.995 34.783 0.00 0.00 32.27 3.18
1363 2986 6.385649 TGGGATATAAAAGATTGCCGAAAC 57.614 37.500 0.00 0.00 0.00 2.78
1427 3050 4.391830 GGCGATTATTAATGGCGAGAATCA 59.608 41.667 14.68 0.00 42.68 2.57
1455 3082 3.624861 CAGCCTTATACTTCCTGCACTTG 59.375 47.826 0.00 0.00 0.00 3.16
1470 3097 0.754472 GCCATACGTACCCAGCCTTA 59.246 55.000 0.00 0.00 0.00 2.69
1476 3103 1.332144 GGTCCTGCCATACGTACCCA 61.332 60.000 0.00 0.00 37.17 4.51
1629 3256 2.915659 TCTTCCGTCCGGTGCAGT 60.916 61.111 0.00 0.00 36.47 4.40
1697 3324 4.882396 GCTTCGGGGAGCTCTCGC 62.882 72.222 14.64 11.01 39.57 5.03
1761 3388 1.273887 GACGATCCTGAAATGCGCG 59.726 57.895 0.00 0.00 0.00 6.86
2033 3663 4.813526 CGTCCTCGTCGTCGCCTG 62.814 72.222 0.00 0.00 36.96 4.85
2142 3772 5.592282 TCCAGAATCAGTAACAAAACTGCAA 59.408 36.000 0.00 0.00 45.34 4.08
2144 3774 5.452777 GTCCAGAATCAGTAACAAAACTGC 58.547 41.667 0.00 0.00 45.34 4.40
2145 3775 5.236478 ACGTCCAGAATCAGTAACAAAACTG 59.764 40.000 0.00 0.00 46.78 3.16
2278 3911 2.271607 CTTACGAGCAGAGCGGCAGA 62.272 60.000 1.45 0.00 35.83 4.26
2325 3965 0.179078 ACCGATCGAGCGAGTCTACT 60.179 55.000 26.68 0.00 0.00 2.57
2379 4025 1.081242 GAACGACCGCACCGAACTA 60.081 57.895 0.00 0.00 0.00 2.24
2434 4116 1.373497 GTCACAGGAGGACACTGCG 60.373 63.158 0.00 0.00 40.42 5.18
2449 4131 4.277009 TGGTGCCCATTGCCGTCA 62.277 61.111 0.00 0.00 40.16 4.35
2480 4162 6.713903 GGCTAACCTTAAAACCAAGTCTACTT 59.286 38.462 0.00 0.00 36.45 2.24
2484 4166 4.404640 GGGCTAACCTTAAAACCAAGTCT 58.595 43.478 0.00 0.00 35.85 3.24
2513 4229 2.325082 CGAAAGGGCCCACACGAAG 61.325 63.158 27.56 4.23 0.00 3.79
2617 4335 7.776618 TGAAGTTAGTTTGGACTCTATCTCA 57.223 36.000 0.00 0.00 37.33 3.27
2622 4340 6.485648 GCCTTTTGAAGTTAGTTTGGACTCTA 59.514 38.462 0.00 0.00 37.33 2.43
2641 4362 2.597510 GCCTGGACCACGCCTTTT 60.598 61.111 4.23 0.00 0.00 2.27
2659 4380 0.661020 AACTTCGGCCTCAACGTTTG 59.339 50.000 0.00 0.00 0.00 2.93
2676 4401 1.654023 GGCCCTGCCGATGTACAAAC 61.654 60.000 0.00 0.00 39.62 2.93
2726 4451 7.016170 AGCAAATGAGGGGTACATTAAGTTTTT 59.984 33.333 0.00 0.00 37.04 1.94
2727 4452 6.496911 AGCAAATGAGGGGTACATTAAGTTTT 59.503 34.615 0.00 0.00 37.04 2.43
2728 4453 6.016555 AGCAAATGAGGGGTACATTAAGTTT 58.983 36.000 0.00 0.00 37.04 2.66
2729 4454 5.580022 AGCAAATGAGGGGTACATTAAGTT 58.420 37.500 0.00 0.00 37.04 2.66
2730 4455 5.193099 AGCAAATGAGGGGTACATTAAGT 57.807 39.130 0.00 0.00 37.04 2.24
2731 4456 5.192927 TGAGCAAATGAGGGGTACATTAAG 58.807 41.667 0.00 0.00 37.04 1.85
2732 4457 5.186256 TGAGCAAATGAGGGGTACATTAA 57.814 39.130 0.00 0.00 37.04 1.40
2733 4458 4.853468 TGAGCAAATGAGGGGTACATTA 57.147 40.909 0.00 0.00 37.04 1.90
2734 4459 3.737559 TGAGCAAATGAGGGGTACATT 57.262 42.857 0.00 0.00 39.25 2.71
2735 4460 3.737559 TTGAGCAAATGAGGGGTACAT 57.262 42.857 0.00 0.00 0.00 2.29
2736 4461 3.517296 TTTGAGCAAATGAGGGGTACA 57.483 42.857 0.00 0.00 0.00 2.90
2737 4462 4.522789 TCTTTTTGAGCAAATGAGGGGTAC 59.477 41.667 0.00 0.00 0.00 3.34
2738 4463 4.735369 TCTTTTTGAGCAAATGAGGGGTA 58.265 39.130 0.00 0.00 0.00 3.69
2739 4464 3.575805 TCTTTTTGAGCAAATGAGGGGT 58.424 40.909 0.00 0.00 0.00 4.95
2740 4465 4.605640 TTCTTTTTGAGCAAATGAGGGG 57.394 40.909 0.00 0.00 31.87 4.79
2741 4466 6.923928 TTTTTCTTTTTGAGCAAATGAGGG 57.076 33.333 0.00 0.00 31.87 4.30
2762 4487 5.591099 ACACGAATGCATCAAGTTCTTTTT 58.409 33.333 0.00 0.00 0.00 1.94
2763 4488 5.186996 ACACGAATGCATCAAGTTCTTTT 57.813 34.783 0.00 0.00 0.00 2.27
2764 4489 4.836125 ACACGAATGCATCAAGTTCTTT 57.164 36.364 0.00 0.00 0.00 2.52
2765 4490 4.836125 AACACGAATGCATCAAGTTCTT 57.164 36.364 0.00 0.00 0.00 2.52
2766 4491 4.143115 CGTAACACGAATGCATCAAGTTCT 60.143 41.667 0.00 0.00 46.05 3.01
2767 4492 4.081761 CGTAACACGAATGCATCAAGTTC 58.918 43.478 0.00 0.00 46.05 3.01
2768 4493 4.065423 CGTAACACGAATGCATCAAGTT 57.935 40.909 0.00 5.87 46.05 2.66
2769 4494 3.722555 CGTAACACGAATGCATCAAGT 57.277 42.857 0.00 0.00 46.05 3.16
2781 4506 2.529090 GGAAGCTAACGATCGTAACACG 59.471 50.000 23.04 9.24 44.19 4.49
2782 4507 3.504863 TGGAAGCTAACGATCGTAACAC 58.495 45.455 23.04 11.50 0.00 3.32
2783 4508 3.853831 TGGAAGCTAACGATCGTAACA 57.146 42.857 23.04 9.00 0.00 2.41
2784 4509 4.418392 TCTTGGAAGCTAACGATCGTAAC 58.582 43.478 23.04 13.72 0.00 2.50
2785 4510 4.707030 TCTTGGAAGCTAACGATCGTAA 57.293 40.909 23.04 8.40 0.00 3.18
2786 4511 4.707030 TTCTTGGAAGCTAACGATCGTA 57.293 40.909 23.04 9.06 0.00 3.43
2869 4595 7.568199 TCAAAAATTAATTTTCCCCGCAAAA 57.432 28.000 22.96 2.98 39.20 2.44
2870 4596 7.568199 TTCAAAAATTAATTTTCCCCGCAAA 57.432 28.000 22.96 9.59 39.20 3.68
2872 4598 6.293680 GCTTTCAAAAATTAATTTTCCCCGCA 60.294 34.615 22.96 7.88 39.20 5.69
2873 4599 6.072728 AGCTTTCAAAAATTAATTTTCCCCGC 60.073 34.615 22.96 19.83 39.20 6.13
2874 4600 7.172361 TCAGCTTTCAAAAATTAATTTTCCCCG 59.828 33.333 22.96 13.57 39.20 5.73
2875 4601 8.389779 TCAGCTTTCAAAAATTAATTTTCCCC 57.610 30.769 22.96 10.83 39.20 4.81
2876 4602 9.830294 CATCAGCTTTCAAAAATTAATTTTCCC 57.170 29.630 22.96 10.28 39.20 3.97
2884 4610 9.897744 CAGTCTTACATCAGCTTTCAAAAATTA 57.102 29.630 0.00 0.00 0.00 1.40
2885 4611 7.869429 CCAGTCTTACATCAGCTTTCAAAAATT 59.131 33.333 0.00 0.00 0.00 1.82
2886 4612 7.373493 CCAGTCTTACATCAGCTTTCAAAAAT 58.627 34.615 0.00 0.00 0.00 1.82
2887 4613 6.239008 CCCAGTCTTACATCAGCTTTCAAAAA 60.239 38.462 0.00 0.00 0.00 1.94
2888 4614 5.241506 CCCAGTCTTACATCAGCTTTCAAAA 59.758 40.000 0.00 0.00 0.00 2.44
2889 4615 4.761739 CCCAGTCTTACATCAGCTTTCAAA 59.238 41.667 0.00 0.00 0.00 2.69
2890 4616 4.326826 CCCAGTCTTACATCAGCTTTCAA 58.673 43.478 0.00 0.00 0.00 2.69
2891 4617 3.307691 CCCCAGTCTTACATCAGCTTTCA 60.308 47.826 0.00 0.00 0.00 2.69
2892 4618 3.274288 CCCCAGTCTTACATCAGCTTTC 58.726 50.000 0.00 0.00 0.00 2.62
2893 4619 2.644798 ACCCCAGTCTTACATCAGCTTT 59.355 45.455 0.00 0.00 0.00 3.51
2894 4620 2.269940 ACCCCAGTCTTACATCAGCTT 58.730 47.619 0.00 0.00 0.00 3.74
2895 4621 1.958288 ACCCCAGTCTTACATCAGCT 58.042 50.000 0.00 0.00 0.00 4.24
2896 4622 2.766828 AGTACCCCAGTCTTACATCAGC 59.233 50.000 0.00 0.00 0.00 4.26
2897 4623 4.023980 TCAGTACCCCAGTCTTACATCAG 58.976 47.826 0.00 0.00 0.00 2.90
2898 4624 3.767673 GTCAGTACCCCAGTCTTACATCA 59.232 47.826 0.00 0.00 0.00 3.07
2899 4625 3.132467 GGTCAGTACCCCAGTCTTACATC 59.868 52.174 0.00 0.00 40.21 3.06
2900 4626 3.105283 GGTCAGTACCCCAGTCTTACAT 58.895 50.000 0.00 0.00 40.21 2.29
2901 4627 2.158279 TGGTCAGTACCCCAGTCTTACA 60.158 50.000 0.00 0.00 46.16 2.41
2902 4628 2.233186 GTGGTCAGTACCCCAGTCTTAC 59.767 54.545 0.00 0.00 46.16 2.34
2903 4629 2.532843 GTGGTCAGTACCCCAGTCTTA 58.467 52.381 0.00 0.00 46.16 2.10
2904 4630 1.349067 GTGGTCAGTACCCCAGTCTT 58.651 55.000 0.00 0.00 46.16 3.01
2905 4631 0.898789 CGTGGTCAGTACCCCAGTCT 60.899 60.000 0.00 0.00 46.16 3.24
2906 4632 0.896940 TCGTGGTCAGTACCCCAGTC 60.897 60.000 0.00 0.00 46.16 3.51
2907 4633 0.898789 CTCGTGGTCAGTACCCCAGT 60.899 60.000 0.00 0.00 46.16 4.00
2908 4634 1.890894 CTCGTGGTCAGTACCCCAG 59.109 63.158 0.00 0.00 46.16 4.45
2909 4635 2.280552 GCTCGTGGTCAGTACCCCA 61.281 63.158 0.00 0.00 46.16 4.96
2997 4723 1.229359 CCTGAAGCCCCTGCATGAT 59.771 57.895 0.00 0.00 41.13 2.45
3077 4803 0.818296 CGGAGAGGAATTGTCGGTCT 59.182 55.000 0.00 0.00 0.00 3.85
3193 4920 4.954875 TGCCAACCTAAACAATTCCAAAG 58.045 39.130 0.00 0.00 0.00 2.77
3215 4942 6.430925 TGCACTCTTCAAACTGCTGTATAAAT 59.569 34.615 0.00 0.00 0.00 1.40
3224 4951 3.911661 AAGATGCACTCTTCAAACTGC 57.088 42.857 0.00 0.00 40.26 4.40
3266 4997 0.108992 AGCTTGCCATCAACATTGCG 60.109 50.000 0.00 0.00 0.00 4.85
3398 5248 5.431765 AGATGGTCTTGCGATTGTTAGATT 58.568 37.500 0.00 0.00 0.00 2.40
3417 5267 3.548587 CGACACTTTGTTGAGCAAGATG 58.451 45.455 0.00 0.00 38.47 2.90
3431 5283 1.172812 GGCCTTTGGAAGCGACACTT 61.173 55.000 0.00 0.00 42.98 3.16
3433 5285 1.600916 AGGCCTTTGGAAGCGACAC 60.601 57.895 0.00 0.00 0.00 3.67
3434 5286 1.600636 CAGGCCTTTGGAAGCGACA 60.601 57.895 0.00 0.00 0.00 4.35
3435 5287 1.301677 CTCAGGCCTTTGGAAGCGAC 61.302 60.000 0.00 0.00 0.00 5.19
3436 5288 1.003355 CTCAGGCCTTTGGAAGCGA 60.003 57.895 0.00 0.00 0.00 4.93
3437 5289 2.042831 CCTCAGGCCTTTGGAAGCG 61.043 63.158 14.15 0.00 0.00 4.68
3438 5290 2.346541 GCCTCAGGCCTTTGGAAGC 61.347 63.158 21.61 10.20 44.06 3.86
3439 5291 4.009015 GCCTCAGGCCTTTGGAAG 57.991 61.111 21.61 4.12 44.06 3.46
3563 5415 1.628846 GACACACCCCCATCAACTAGT 59.371 52.381 0.00 0.00 0.00 2.57
3662 5514 6.754193 ACCGGACAATTGTTCAAATAAACAT 58.246 32.000 17.08 0.00 38.83 2.71
3822 5674 2.885266 ACTCTCTGTTCGTGAGCTTACA 59.115 45.455 9.54 0.00 36.87 2.41
3906 5758 3.382083 AAGAATTAACCGGCCTCCATT 57.618 42.857 0.00 0.00 0.00 3.16
3971 5823 1.289530 ACCCCAACTGGAACCTCAAAA 59.710 47.619 0.00 0.00 37.39 2.44
4067 5919 3.558033 ACGACAAATAACACCCCACTTT 58.442 40.909 0.00 0.00 0.00 2.66
4075 5927 6.103997 TGATCCTTAGGACGACAAATAACAC 58.896 40.000 1.74 0.00 32.98 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.