Multiple sequence alignment - TraesCS3B01G346300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G346300 chr3B 100.000 3447 0 0 1 3447 555924751 555928197 0.000000e+00 6366.0
1 TraesCS3B01G346300 chr3B 97.815 2654 54 2 795 3447 555736770 555739420 0.000000e+00 4577.0
2 TraesCS3B01G346300 chr3B 93.968 431 22 2 350 780 555721758 555722184 0.000000e+00 649.0
3 TraesCS3B01G346300 chr3B 73.727 373 64 25 4 357 793035962 793036319 7.820000e-22 115.0
4 TraesCS3B01G346300 chr3B 90.123 81 0 2 2694 2770 555738705 555738781 7.870000e-17 99.0
5 TraesCS3B01G346300 chr3B 88.889 81 1 3 2730 2806 555738669 555738745 3.660000e-15 93.5
6 TraesCS3B01G346300 chr3B 88.889 81 1 3 2730 2806 555927444 555927520 3.660000e-15 93.5
7 TraesCS3B01G346300 chr3B 88.889 81 1 3 2694 2770 555927480 555927556 3.660000e-15 93.5
8 TraesCS3B01G346300 chr3B 86.301 73 7 2 303 374 440114059 440113989 3.690000e-10 76.8
9 TraesCS3B01G346300 chr3B 100.000 37 0 0 2694 2730 555738745 555738781 6.170000e-08 69.4
10 TraesCS3B01G346300 chr3A 97.847 1347 17 5 985 2325 562571473 562570133 0.000000e+00 2316.0
11 TraesCS3B01G346300 chr3A 96.304 460 17 0 2888 3347 562570109 562569650 0.000000e+00 756.0
12 TraesCS3B01G346300 chr3A 93.750 432 19 5 350 780 562575919 562575495 2.900000e-180 641.0
13 TraesCS3B01G346300 chr3A 78.355 231 41 6 1715 1945 103018684 103018905 1.290000e-29 141.0
14 TraesCS3B01G346300 chr3A 94.937 79 4 0 3369 3447 562569517 562569439 1.300000e-24 124.0
15 TraesCS3B01G346300 chr3A 87.500 56 5 2 281 336 33568298 33568245 2.870000e-06 63.9
16 TraesCS3B01G346300 chr3A 100.000 28 0 0 2343 2370 562570133 562570106 6.000000e-03 52.8
17 TraesCS3B01G346300 chr2B 84.792 914 121 12 1213 2117 79704470 79703566 0.000000e+00 902.0
18 TraesCS3B01G346300 chr2B 83.763 930 118 21 1208 2117 79702775 79701859 0.000000e+00 850.0
19 TraesCS3B01G346300 chr2B 82.320 362 33 14 864 1197 79704877 79704519 5.630000e-73 285.0
20 TraesCS3B01G346300 chr2A 81.744 1101 152 21 1213 2265 52568402 52567303 0.000000e+00 874.0
21 TraesCS3B01G346300 chr2A 83.056 360 33 16 864 1201 52568803 52568450 5.590000e-78 302.0
22 TraesCS3B01G346300 chr2A 80.892 157 20 9 4 156 69999740 69999890 7.820000e-22 115.0
23 TraesCS3B01G346300 chr3D 96.216 185 7 0 350 534 425558529 425558345 1.550000e-78 303.0
24 TraesCS3B01G346300 chr3D 96.124 129 2 1 652 780 425558346 425558221 1.250000e-49 207.0
25 TraesCS3B01G346300 chr3D 95.556 45 1 1 6 50 421708123 421708166 1.720000e-08 71.3
26 TraesCS3B01G346300 chr3D 87.037 54 5 2 281 334 24090797 24090746 3.720000e-05 60.2
27 TraesCS3B01G346300 chr3D 97.059 34 0 1 302 335 62343676 62343708 4.810000e-04 56.5
28 TraesCS3B01G346300 chr5D 80.579 242 36 9 3 241 446259067 446258834 3.540000e-40 176.0
29 TraesCS3B01G346300 chr5A 74.564 401 60 28 4 392 704582586 704582216 1.670000e-28 137.0
30 TraesCS3B01G346300 chr5A 85.714 70 5 5 287 354 391991020 391991086 6.170000e-08 69.4
31 TraesCS3B01G346300 chrUn 73.740 377 66 25 4 374 108894862 108895211 2.170000e-22 117.0
32 TraesCS3B01G346300 chr1B 73.684 380 67 26 3 374 150553235 150552881 2.170000e-22 117.0
33 TraesCS3B01G346300 chr1B 84.615 65 5 4 261 325 487687804 487687745 3.720000e-05 60.2
34 TraesCS3B01G346300 chr1A 73.475 377 64 25 10 374 66336620 66336268 3.640000e-20 110.0
35 TraesCS3B01G346300 chr7B 88.043 92 7 3 6 97 87186015 87185928 4.700000e-19 106.0
36 TraesCS3B01G346300 chr7B 74.157 267 48 18 112 374 648224614 648224365 1.320000e-14 91.6
37 TraesCS3B01G346300 chr1D 84.404 109 13 4 267 374 3302565 3302460 1.690000e-18 104.0
38 TraesCS3B01G346300 chr5B 96.875 32 0 1 303 333 559537297 559537266 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G346300 chr3B 555924751 555928197 3446 False 2184.333333 6366 92.592667 1 3447 3 chr3B.!!$F4 3446
1 TraesCS3B01G346300 chr3B 555736770 555739420 2650 False 1209.725000 4577 94.206750 795 3447 4 chr3B.!!$F3 2652
2 TraesCS3B01G346300 chr3A 562569439 562571473 2034 True 812.200000 2316 97.272000 985 3447 4 chr3A.!!$R3 2462
3 TraesCS3B01G346300 chr2B 79701859 79704877 3018 True 679.000000 902 83.625000 864 2117 3 chr2B.!!$R1 1253
4 TraesCS3B01G346300 chr2A 52567303 52568803 1500 True 588.000000 874 82.400000 864 2265 2 chr2A.!!$R1 1401

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
761 762 0.033796 CCCTAGACGTACCTCACCCA 60.034 60.0 0.00 0.0 0.0 4.51 F
764 765 0.323725 TAGACGTACCTCACCCACCC 60.324 60.0 0.00 0.0 0.0 4.61 F
2234 2362 0.820226 TCCAGATCTTGCAGGAGTCG 59.180 55.0 4.35 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2234 2362 0.109597 CTTGATCAAGTTGGTGCCGC 60.110 55.000 24.65 0.0 33.87 6.53 R
2418 3202 2.083774 TGATTGCTAACTGGGAAAGCG 58.916 47.619 0.00 0.0 39.14 4.68 R
3364 4230 0.032540 GAAACAGCAAGCAACCCAGG 59.967 55.000 0.00 0.0 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.093867 GTGAATTGGAAAAGTTCATCGTTTC 57.906 36.000 0.00 0.00 41.43 2.78
25 26 6.918022 GTGAATTGGAAAAGTTCATCGTTTCT 59.082 34.615 0.00 0.00 41.70 2.52
26 27 6.917477 TGAATTGGAAAAGTTCATCGTTTCTG 59.083 34.615 0.00 0.00 41.70 3.02
27 28 6.633500 ATTGGAAAAGTTCATCGTTTCTGA 57.367 33.333 0.00 0.00 41.70 3.27
28 29 6.443934 TTGGAAAAGTTCATCGTTTCTGAA 57.556 33.333 0.00 0.00 41.70 3.02
29 30 6.443934 TGGAAAAGTTCATCGTTTCTGAAA 57.556 33.333 0.00 0.00 41.70 2.69
30 31 6.857956 TGGAAAAGTTCATCGTTTCTGAAAA 58.142 32.000 4.09 0.00 41.70 2.29
31 32 7.316640 TGGAAAAGTTCATCGTTTCTGAAAAA 58.683 30.769 4.09 0.00 41.70 1.94
57 58 9.671279 AAGTTCATCCAATTTGAAAAGAAAAGT 57.329 25.926 0.00 0.00 35.03 2.66
58 59 9.671279 AGTTCATCCAATTTGAAAAGAAAAGTT 57.329 25.926 0.00 0.00 35.03 2.66
59 60 9.920826 GTTCATCCAATTTGAAAAGAAAAGTTC 57.079 29.630 0.00 0.00 35.03 3.01
60 61 9.664332 TTCATCCAATTTGAAAAGAAAAGTTCA 57.336 25.926 0.00 0.00 30.44 3.18
61 62 9.835389 TCATCCAATTTGAAAAGAAAAGTTCAT 57.165 25.926 0.00 0.00 33.90 2.57
91 92 8.477984 TTGAGAAAGAAGTTGACAAATTTTGG 57.522 30.769 13.42 0.00 34.12 3.28
92 93 7.835822 TGAGAAAGAAGTTGACAAATTTTGGA 58.164 30.769 13.42 0.00 34.12 3.53
93 94 8.310382 TGAGAAAGAAGTTGACAAATTTTGGAA 58.690 29.630 13.42 3.41 34.12 3.53
94 95 9.150348 GAGAAAGAAGTTGACAAATTTTGGAAA 57.850 29.630 13.42 4.70 34.12 3.13
95 96 9.500785 AGAAAGAAGTTGACAAATTTTGGAAAA 57.499 25.926 13.42 2.44 34.12 2.29
105 106 9.920133 TGACAAATTTTGGAAAAATATCATCGA 57.080 25.926 13.42 0.00 34.12 3.59
112 113 9.973450 TTTTGGAAAAATATCATCGAACTCAAA 57.027 25.926 0.00 0.00 0.00 2.69
113 114 9.973450 TTTGGAAAAATATCATCGAACTCAAAA 57.027 25.926 0.00 0.00 0.00 2.44
114 115 9.973450 TTGGAAAAATATCATCGAACTCAAAAA 57.027 25.926 0.00 0.00 0.00 1.94
164 165 7.587037 TCAATGAGTTTGAAAAGTTCATCCT 57.413 32.000 2.64 0.00 41.38 3.24
165 166 8.010733 TCAATGAGTTTGAAAAGTTCATCCTT 57.989 30.769 2.64 0.00 41.38 3.36
166 167 8.477256 TCAATGAGTTTGAAAAGTTCATCCTTT 58.523 29.630 2.64 0.00 41.38 3.11
167 168 9.748708 CAATGAGTTTGAAAAGTTCATCCTTTA 57.251 29.630 2.64 0.00 39.84 1.85
169 170 9.918630 ATGAGTTTGAAAAGTTCATCCTTTATG 57.081 29.630 0.00 0.00 39.84 1.90
170 171 9.130661 TGAGTTTGAAAAGTTCATCCTTTATGA 57.869 29.630 0.00 0.00 43.03 2.15
200 201 9.933723 AAGGTTCATCCAATATGAAAAGAAAAG 57.066 29.630 2.19 0.00 39.43 2.27
201 202 9.093458 AGGTTCATCCAATATGAAAAGAAAAGT 57.907 29.630 2.19 0.00 39.43 2.66
202 203 9.710900 GGTTCATCCAATATGAAAAGAAAAGTT 57.289 29.630 2.19 0.00 39.43 2.66
244 245 8.942338 AAGTTCATTAGTTTTGGAAAAAGACC 57.058 30.769 0.00 0.00 0.00 3.85
245 246 8.073467 AGTTCATTAGTTTTGGAAAAAGACCA 57.927 30.769 0.00 0.00 35.47 4.02
246 247 8.704668 AGTTCATTAGTTTTGGAAAAAGACCAT 58.295 29.630 0.00 0.00 37.26 3.55
247 248 8.978539 GTTCATTAGTTTTGGAAAAAGACCATC 58.021 33.333 0.00 0.00 37.26 3.51
248 249 7.367285 TCATTAGTTTTGGAAAAAGACCATCG 58.633 34.615 0.00 0.00 37.26 3.84
249 250 6.945938 TTAGTTTTGGAAAAAGACCATCGA 57.054 33.333 0.00 0.00 37.26 3.59
250 251 5.845391 AGTTTTGGAAAAAGACCATCGAA 57.155 34.783 0.00 0.00 37.26 3.71
251 252 5.588240 AGTTTTGGAAAAAGACCATCGAAC 58.412 37.500 0.00 0.00 37.26 3.95
252 253 5.359860 AGTTTTGGAAAAAGACCATCGAACT 59.640 36.000 0.00 0.00 37.26 3.01
253 254 5.845391 TTTGGAAAAAGACCATCGAACTT 57.155 34.783 0.00 0.00 37.26 2.66
254 255 4.829064 TGGAAAAAGACCATCGAACTTG 57.171 40.909 0.00 0.00 32.03 3.16
255 256 4.456535 TGGAAAAAGACCATCGAACTTGA 58.543 39.130 0.00 0.00 32.03 3.02
256 257 4.884744 TGGAAAAAGACCATCGAACTTGAA 59.115 37.500 0.00 0.00 32.03 2.69
257 258 5.008613 TGGAAAAAGACCATCGAACTTGAAG 59.991 40.000 0.00 0.00 32.03 3.02
258 259 5.238650 GGAAAAAGACCATCGAACTTGAAGA 59.761 40.000 0.00 0.00 0.00 2.87
259 260 6.072452 GGAAAAAGACCATCGAACTTGAAGAT 60.072 38.462 0.00 0.00 0.00 2.40
260 261 6.884280 AAAAGACCATCGAACTTGAAGATT 57.116 33.333 0.00 0.00 0.00 2.40
261 262 6.884280 AAAGACCATCGAACTTGAAGATTT 57.116 33.333 0.00 0.00 0.00 2.17
262 263 6.884280 AAGACCATCGAACTTGAAGATTTT 57.116 33.333 0.00 0.00 0.00 1.82
263 264 6.246420 AGACCATCGAACTTGAAGATTTTG 57.754 37.500 0.00 0.00 0.00 2.44
264 265 5.997746 AGACCATCGAACTTGAAGATTTTGA 59.002 36.000 0.00 0.00 0.00 2.69
265 266 6.486657 AGACCATCGAACTTGAAGATTTTGAA 59.513 34.615 0.00 0.00 0.00 2.69
266 267 7.013274 AGACCATCGAACTTGAAGATTTTGAAA 59.987 33.333 0.00 0.00 0.00 2.69
267 268 7.488322 ACCATCGAACTTGAAGATTTTGAAAA 58.512 30.769 0.00 0.00 0.00 2.29
268 269 7.978975 ACCATCGAACTTGAAGATTTTGAAAAA 59.021 29.630 0.00 0.00 0.00 1.94
348 349 9.579768 TTTTGAAAGAAAGTTCATCGATTTTGA 57.420 25.926 0.00 0.00 37.36 2.69
349 350 8.786937 TTGAAAGAAAGTTCATCGATTTTGAG 57.213 30.769 0.00 0.00 37.36 3.02
350 351 8.153479 TGAAAGAAAGTTCATCGATTTTGAGA 57.847 30.769 0.00 0.00 32.56 3.27
351 352 8.620416 TGAAAGAAAGTTCATCGATTTTGAGAA 58.380 29.630 0.00 0.00 32.56 2.87
352 353 9.450807 GAAAGAAAGTTCATCGATTTTGAGAAA 57.549 29.630 0.00 0.00 0.00 2.52
353 354 9.801873 AAAGAAAGTTCATCGATTTTGAGAAAA 57.198 25.926 0.00 0.00 34.41 2.29
354 355 9.801873 AAGAAAGTTCATCGATTTTGAGAAAAA 57.198 25.926 0.00 0.00 33.47 1.94
355 356 9.455847 AGAAAGTTCATCGATTTTGAGAAAAAG 57.544 29.630 0.00 0.00 33.47 2.27
356 357 9.237846 GAAAGTTCATCGATTTTGAGAAAAAGT 57.762 29.630 0.00 0.00 33.47 2.66
357 358 8.566008 AAGTTCATCGATTTTGAGAAAAAGTG 57.434 30.769 0.00 0.00 33.47 3.16
358 359 6.638468 AGTTCATCGATTTTGAGAAAAAGTGC 59.362 34.615 0.00 0.00 33.47 4.40
359 360 6.070897 TCATCGATTTTGAGAAAAAGTGCA 57.929 33.333 0.00 0.00 33.47 4.57
360 361 6.680810 TCATCGATTTTGAGAAAAAGTGCAT 58.319 32.000 0.00 0.00 33.47 3.96
361 362 6.803320 TCATCGATTTTGAGAAAAAGTGCATC 59.197 34.615 0.00 0.00 33.47 3.91
362 363 5.146460 TCGATTTTGAGAAAAAGTGCATCG 58.854 37.500 0.00 0.00 33.47 3.84
363 364 5.049749 TCGATTTTGAGAAAAAGTGCATCGA 60.050 36.000 0.00 0.00 34.20 3.59
364 365 5.796935 CGATTTTGAGAAAAAGTGCATCGAT 59.203 36.000 0.00 0.00 30.97 3.59
365 366 6.306356 CGATTTTGAGAAAAAGTGCATCGATT 59.694 34.615 0.00 0.00 30.97 3.34
366 367 7.148918 CGATTTTGAGAAAAAGTGCATCGATTT 60.149 33.333 0.00 0.00 30.97 2.17
367 368 7.769272 TTTTGAGAAAAAGTGCATCGATTTT 57.231 28.000 0.00 0.00 0.00 1.82
368 369 6.752335 TTGAGAAAAAGTGCATCGATTTTG 57.248 33.333 0.00 0.00 0.00 2.44
369 370 6.070897 TGAGAAAAAGTGCATCGATTTTGA 57.929 33.333 0.00 0.00 0.00 2.69
370 371 6.502652 TGAGAAAAAGTGCATCGATTTTGAA 58.497 32.000 0.00 0.00 0.00 2.69
371 372 6.977502 TGAGAAAAAGTGCATCGATTTTGAAA 59.022 30.769 0.00 0.00 0.00 2.69
372 373 7.490725 TGAGAAAAAGTGCATCGATTTTGAAAA 59.509 29.630 0.00 0.00 0.00 2.29
373 374 8.195617 AGAAAAAGTGCATCGATTTTGAAAAA 57.804 26.923 0.00 0.00 0.00 1.94
374 375 8.829612 AGAAAAAGTGCATCGATTTTGAAAAAT 58.170 25.926 0.00 0.68 41.06 1.82
375 376 9.437045 GAAAAAGTGCATCGATTTTGAAAAATT 57.563 25.926 0.00 0.00 38.64 1.82
378 379 7.281991 AGTGCATCGATTTTGAAAAATTAGC 57.718 32.000 0.00 5.78 38.64 3.09
379 380 6.033831 AGTGCATCGATTTTGAAAAATTAGCG 59.966 34.615 0.00 2.95 38.64 4.26
380 381 5.183209 GCATCGATTTTGAAAAATTAGCGC 58.817 37.500 0.00 0.00 38.64 5.92
381 382 5.220191 GCATCGATTTTGAAAAATTAGCGCA 60.220 36.000 11.47 0.00 38.64 6.09
382 383 6.508404 GCATCGATTTTGAAAAATTAGCGCAT 60.508 34.615 11.47 0.00 38.64 4.73
383 384 6.942886 TCGATTTTGAAAAATTAGCGCATT 57.057 29.167 11.47 0.00 38.64 3.56
384 385 7.344910 TCGATTTTGAAAAATTAGCGCATTT 57.655 28.000 11.47 4.82 38.64 2.32
385 386 8.454293 TCGATTTTGAAAAATTAGCGCATTTA 57.546 26.923 11.47 0.00 38.64 1.40
386 387 8.916654 TCGATTTTGAAAAATTAGCGCATTTAA 58.083 25.926 11.47 0.00 38.64 1.52
387 388 9.186938 CGATTTTGAAAAATTAGCGCATTTAAG 57.813 29.630 11.47 0.00 38.64 1.85
397 398 9.691362 AAATTAGCGCATTTAAGAAAAAGAAGA 57.309 25.926 11.47 0.00 0.00 2.87
398 399 9.691362 AATTAGCGCATTTAAGAAAAAGAAGAA 57.309 25.926 11.47 0.00 0.00 2.52
399 400 9.691362 ATTAGCGCATTTAAGAAAAAGAAGAAA 57.309 25.926 11.47 0.00 0.00 2.52
400 401 9.522804 TTAGCGCATTTAAGAAAAAGAAGAAAA 57.477 25.926 11.47 0.00 0.00 2.29
401 402 8.419076 AGCGCATTTAAGAAAAAGAAGAAAAA 57.581 26.923 11.47 0.00 0.00 1.94
402 403 8.328146 AGCGCATTTAAGAAAAAGAAGAAAAAC 58.672 29.630 11.47 0.00 0.00 2.43
403 404 8.113675 GCGCATTTAAGAAAAAGAAGAAAAACA 58.886 29.630 0.30 0.00 0.00 2.83
404 405 9.623687 CGCATTTAAGAAAAAGAAGAAAAACAG 57.376 29.630 0.00 0.00 0.00 3.16
405 406 9.920826 GCATTTAAGAAAAAGAAGAAAAACAGG 57.079 29.630 0.00 0.00 0.00 4.00
412 413 9.996554 AGAAAAAGAAGAAAAACAGGAAAAAGA 57.003 25.926 0.00 0.00 0.00 2.52
424 425 8.958119 AAACAGGAAAAAGATAAAAGTTTCCC 57.042 30.769 9.77 0.00 46.80 3.97
425 426 7.062749 ACAGGAAAAAGATAAAAGTTTCCCC 57.937 36.000 9.77 0.00 46.80 4.81
426 427 6.613679 ACAGGAAAAAGATAAAAGTTTCCCCA 59.386 34.615 9.77 0.00 46.80 4.96
427 428 7.126573 ACAGGAAAAAGATAAAAGTTTCCCCAA 59.873 33.333 9.77 0.00 46.80 4.12
428 429 7.441157 CAGGAAAAAGATAAAAGTTTCCCCAAC 59.559 37.037 9.77 0.00 46.80 3.77
430 431 8.644216 GGAAAAAGATAAAAGTTTCCCCAACTA 58.356 33.333 3.16 0.00 45.77 2.24
434 435 9.429109 AAAGATAAAAGTTTCCCCAACTAAAGA 57.571 29.630 0.00 0.00 45.77 2.52
435 436 8.637196 AGATAAAAGTTTCCCCAACTAAAGAG 57.363 34.615 0.00 0.00 45.77 2.85
436 437 8.445588 AGATAAAAGTTTCCCCAACTAAAGAGA 58.554 33.333 0.00 0.00 45.77 3.10
437 438 9.074576 GATAAAAGTTTCCCCAACTAAAGAGAA 57.925 33.333 0.00 0.00 45.77 2.87
438 439 7.914427 AAAAGTTTCCCCAACTAAAGAGAAT 57.086 32.000 0.00 0.00 45.77 2.40
440 441 9.429109 AAAAGTTTCCCCAACTAAAGAGAATAA 57.571 29.630 0.00 0.00 45.77 1.40
441 442 9.429109 AAAGTTTCCCCAACTAAAGAGAATAAA 57.571 29.630 0.00 0.00 45.77 1.40
442 443 9.429109 AAGTTTCCCCAACTAAAGAGAATAAAA 57.571 29.630 0.00 0.00 45.77 1.52
443 444 9.078990 AGTTTCCCCAACTAAAGAGAATAAAAG 57.921 33.333 0.00 0.00 44.56 2.27
444 445 8.857098 GTTTCCCCAACTAAAGAGAATAAAAGT 58.143 33.333 0.00 0.00 31.92 2.66
445 446 7.996098 TCCCCAACTAAAGAGAATAAAAGTG 57.004 36.000 0.00 0.00 0.00 3.16
446 447 6.946009 TCCCCAACTAAAGAGAATAAAAGTGG 59.054 38.462 0.00 0.00 0.00 4.00
447 448 6.152831 CCCCAACTAAAGAGAATAAAAGTGGG 59.847 42.308 0.00 0.00 0.00 4.61
448 449 6.946009 CCCAACTAAAGAGAATAAAAGTGGGA 59.054 38.462 0.00 0.00 30.81 4.37
449 450 7.450323 CCCAACTAAAGAGAATAAAAGTGGGAA 59.550 37.037 0.00 0.00 30.81 3.97
450 451 8.856103 CCAACTAAAGAGAATAAAAGTGGGAAA 58.144 33.333 0.00 0.00 30.81 3.13
451 452 9.899226 CAACTAAAGAGAATAAAAGTGGGAAAG 57.101 33.333 0.00 0.00 0.00 2.62
452 453 8.637196 ACTAAAGAGAATAAAAGTGGGAAAGG 57.363 34.615 0.00 0.00 0.00 3.11
453 454 8.445588 ACTAAAGAGAATAAAAGTGGGAAAGGA 58.554 33.333 0.00 0.00 0.00 3.36
454 455 9.297037 CTAAAGAGAATAAAAGTGGGAAAGGAA 57.703 33.333 0.00 0.00 0.00 3.36
455 456 7.526142 AAGAGAATAAAAGTGGGAAAGGAAC 57.474 36.000 0.00 0.00 0.00 3.62
457 458 7.985589 AGAGAATAAAAGTGGGAAAGGAACTA 58.014 34.615 0.00 0.00 38.49 2.24
458 459 8.615705 AGAGAATAAAAGTGGGAAAGGAACTAT 58.384 33.333 0.00 0.00 38.49 2.12
459 460 8.581253 AGAATAAAAGTGGGAAAGGAACTATG 57.419 34.615 0.00 0.00 38.49 2.23
460 461 8.170730 AGAATAAAAGTGGGAAAGGAACTATGT 58.829 33.333 0.00 0.00 38.49 2.29
461 462 8.721133 AATAAAAGTGGGAAAGGAACTATGTT 57.279 30.769 0.00 0.00 38.49 2.71
462 463 6.405278 AAAAGTGGGAAAGGAACTATGTTG 57.595 37.500 0.00 0.00 38.49 3.33
463 464 4.034285 AGTGGGAAAGGAACTATGTTGG 57.966 45.455 0.00 0.00 38.49 3.77
464 465 2.492088 GTGGGAAAGGAACTATGTTGGC 59.508 50.000 0.00 0.00 38.49 4.52
465 466 2.109128 TGGGAAAGGAACTATGTTGGCA 59.891 45.455 0.00 0.00 38.49 4.92
466 467 3.161866 GGGAAAGGAACTATGTTGGCAA 58.838 45.455 0.00 0.00 38.49 4.52
467 468 3.576550 GGGAAAGGAACTATGTTGGCAAA 59.423 43.478 0.00 0.00 38.49 3.68
468 469 4.222810 GGGAAAGGAACTATGTTGGCAAAT 59.777 41.667 0.00 0.77 38.49 2.32
469 470 5.279960 GGGAAAGGAACTATGTTGGCAAATT 60.280 40.000 0.00 0.00 38.49 1.82
470 471 5.869344 GGAAAGGAACTATGTTGGCAAATTC 59.131 40.000 0.00 1.45 38.49 2.17
471 472 6.295292 GGAAAGGAACTATGTTGGCAAATTCT 60.295 38.462 0.00 0.00 38.49 2.40
472 473 7.093945 GGAAAGGAACTATGTTGGCAAATTCTA 60.094 37.037 0.00 0.00 38.49 2.10
473 474 7.961326 AAGGAACTATGTTGGCAAATTCTAT 57.039 32.000 0.00 0.00 38.49 1.98
474 475 7.573968 AGGAACTATGTTGGCAAATTCTATC 57.426 36.000 0.00 0.00 36.02 2.08
475 476 6.260936 AGGAACTATGTTGGCAAATTCTATCG 59.739 38.462 0.00 0.00 36.02 2.92
476 477 6.260050 GGAACTATGTTGGCAAATTCTATCGA 59.740 38.462 0.00 0.00 0.00 3.59
477 478 6.851222 ACTATGTTGGCAAATTCTATCGAG 57.149 37.500 0.00 0.00 0.00 4.04
478 479 6.582636 ACTATGTTGGCAAATTCTATCGAGA 58.417 36.000 0.00 0.00 0.00 4.04
479 480 7.220030 ACTATGTTGGCAAATTCTATCGAGAT 58.780 34.615 0.00 0.00 0.00 2.75
480 481 5.739752 TGTTGGCAAATTCTATCGAGATG 57.260 39.130 0.00 0.00 0.00 2.90
481 482 4.576053 TGTTGGCAAATTCTATCGAGATGG 59.424 41.667 0.00 0.00 0.00 3.51
482 483 3.141398 TGGCAAATTCTATCGAGATGGC 58.859 45.455 0.00 0.00 0.00 4.40
483 484 3.141398 GGCAAATTCTATCGAGATGGCA 58.859 45.455 0.00 0.00 0.00 4.92
484 485 3.755378 GGCAAATTCTATCGAGATGGCAT 59.245 43.478 0.00 0.00 0.00 4.40
485 486 4.937620 GGCAAATTCTATCGAGATGGCATA 59.062 41.667 0.00 0.00 0.00 3.14
486 487 5.064452 GGCAAATTCTATCGAGATGGCATAG 59.936 44.000 0.00 0.00 0.00 2.23
487 488 5.641209 GCAAATTCTATCGAGATGGCATAGT 59.359 40.000 0.00 0.00 0.00 2.12
488 489 6.401903 GCAAATTCTATCGAGATGGCATAGTG 60.402 42.308 0.00 0.00 0.00 2.74
489 490 4.790765 TTCTATCGAGATGGCATAGTGG 57.209 45.455 0.00 0.00 0.00 4.00
490 491 3.767711 TCTATCGAGATGGCATAGTGGT 58.232 45.455 0.00 0.00 0.00 4.16
491 492 4.152647 TCTATCGAGATGGCATAGTGGTT 58.847 43.478 0.00 0.00 0.00 3.67
492 493 5.321927 TCTATCGAGATGGCATAGTGGTTA 58.678 41.667 0.00 0.00 0.00 2.85
493 494 3.728076 TCGAGATGGCATAGTGGTTAC 57.272 47.619 0.00 0.00 0.00 2.50
494 495 3.028130 TCGAGATGGCATAGTGGTTACA 58.972 45.455 0.00 0.00 0.00 2.41
495 496 3.449377 TCGAGATGGCATAGTGGTTACAA 59.551 43.478 0.00 0.00 0.00 2.41
496 497 3.555956 CGAGATGGCATAGTGGTTACAAC 59.444 47.826 0.00 0.00 0.00 3.32
497 498 3.531538 AGATGGCATAGTGGTTACAACG 58.468 45.455 0.00 0.00 0.00 4.10
498 499 2.102070 TGGCATAGTGGTTACAACGG 57.898 50.000 0.00 0.00 0.00 4.44
499 500 1.348366 TGGCATAGTGGTTACAACGGT 59.652 47.619 0.00 0.00 0.00 4.83
500 501 2.566279 TGGCATAGTGGTTACAACGGTA 59.434 45.455 0.00 0.00 0.00 4.02
501 502 3.198200 TGGCATAGTGGTTACAACGGTAT 59.802 43.478 0.00 0.00 0.00 2.73
502 503 3.558418 GGCATAGTGGTTACAACGGTATG 59.442 47.826 0.00 0.00 0.00 2.39
503 504 3.001939 GCATAGTGGTTACAACGGTATGC 59.998 47.826 7.91 7.91 36.38 3.14
504 505 4.439057 CATAGTGGTTACAACGGTATGCT 58.561 43.478 0.00 0.00 0.00 3.79
505 506 2.968675 AGTGGTTACAACGGTATGCTC 58.031 47.619 0.00 0.00 0.00 4.26
506 507 2.565834 AGTGGTTACAACGGTATGCTCT 59.434 45.455 0.00 0.00 0.00 4.09
507 508 2.671396 GTGGTTACAACGGTATGCTCTG 59.329 50.000 0.00 0.00 0.00 3.35
508 509 2.563620 TGGTTACAACGGTATGCTCTGA 59.436 45.455 0.00 0.00 0.00 3.27
509 510 2.928116 GGTTACAACGGTATGCTCTGAC 59.072 50.000 0.00 0.00 0.00 3.51
510 511 3.368116 GGTTACAACGGTATGCTCTGACT 60.368 47.826 0.00 0.00 0.00 3.41
511 512 2.656560 ACAACGGTATGCTCTGACTC 57.343 50.000 0.00 0.00 0.00 3.36
512 513 1.135373 ACAACGGTATGCTCTGACTCG 60.135 52.381 0.00 0.00 0.00 4.18
513 514 1.132453 CAACGGTATGCTCTGACTCGA 59.868 52.381 0.00 0.00 0.00 4.04
514 515 1.018148 ACGGTATGCTCTGACTCGAG 58.982 55.000 11.84 11.84 0.00 4.04
515 516 1.300481 CGGTATGCTCTGACTCGAGA 58.700 55.000 21.68 0.00 32.74 4.04
516 517 1.262950 CGGTATGCTCTGACTCGAGAG 59.737 57.143 21.68 7.17 42.24 3.20
517 518 1.606668 GGTATGCTCTGACTCGAGAGG 59.393 57.143 21.68 8.49 40.04 3.69
518 519 2.294074 GTATGCTCTGACTCGAGAGGT 58.706 52.381 21.68 0.00 40.04 3.85
519 520 1.388547 ATGCTCTGACTCGAGAGGTC 58.611 55.000 21.68 7.97 40.04 3.85
520 521 0.326595 TGCTCTGACTCGAGAGGTCT 59.673 55.000 21.68 0.00 40.04 3.85
521 522 1.014352 GCTCTGACTCGAGAGGTCTC 58.986 60.000 21.68 6.21 40.04 3.36
534 535 4.352887 GAGAGGTCTCGATTTCTAAACCG 58.647 47.826 0.00 0.00 32.78 4.44
535 536 2.858941 GAGGTCTCGATTTCTAAACCGC 59.141 50.000 0.00 0.00 32.01 5.68
536 537 1.931841 GGTCTCGATTTCTAAACCGCC 59.068 52.381 0.00 0.00 0.00 6.13
537 538 1.587034 GTCTCGATTTCTAAACCGCCG 59.413 52.381 0.00 0.00 0.00 6.46
538 539 0.928229 CTCGATTTCTAAACCGCCGG 59.072 55.000 0.00 0.00 0.00 6.13
539 540 0.460635 TCGATTTCTAAACCGCCGGG 60.461 55.000 8.57 0.00 40.11 5.73
540 541 1.725665 GATTTCTAAACCGCCGGGC 59.274 57.895 8.57 9.54 36.48 6.13
553 554 3.431725 CGGGCGCACCTTTTCCTC 61.432 66.667 10.83 0.00 36.97 3.71
554 555 3.062466 GGGCGCACCTTTTCCTCC 61.062 66.667 10.83 0.00 35.85 4.30
555 556 3.431725 GGCGCACCTTTTCCTCCG 61.432 66.667 10.83 0.00 0.00 4.63
556 557 4.103103 GCGCACCTTTTCCTCCGC 62.103 66.667 0.30 0.00 34.50 5.54
557 558 3.788766 CGCACCTTTTCCTCCGCG 61.789 66.667 0.00 0.00 36.47 6.46
558 559 4.103103 GCACCTTTTCCTCCGCGC 62.103 66.667 0.00 0.00 0.00 6.86
559 560 3.431725 CACCTTTTCCTCCGCGCC 61.432 66.667 0.00 0.00 0.00 6.53
560 561 3.948719 ACCTTTTCCTCCGCGCCA 61.949 61.111 0.00 0.00 0.00 5.69
561 562 3.431725 CCTTTTCCTCCGCGCCAC 61.432 66.667 0.00 0.00 0.00 5.01
562 563 2.668212 CTTTTCCTCCGCGCCACA 60.668 61.111 0.00 0.00 0.00 4.17
563 564 2.668212 TTTTCCTCCGCGCCACAG 60.668 61.111 0.00 0.00 0.00 3.66
564 565 4.697756 TTTCCTCCGCGCCACAGG 62.698 66.667 0.00 4.51 0.00 4.00
574 575 2.800736 GCCACAGGCGCCAAATAG 59.199 61.111 31.54 14.19 39.62 1.73
575 576 2.774799 GCCACAGGCGCCAAATAGG 61.775 63.158 31.54 22.42 39.62 2.57
576 577 1.077787 CCACAGGCGCCAAATAGGA 60.078 57.895 31.54 0.00 41.22 2.94
577 578 0.679640 CCACAGGCGCCAAATAGGAA 60.680 55.000 31.54 0.00 41.22 3.36
578 579 1.173043 CACAGGCGCCAAATAGGAAA 58.827 50.000 31.54 0.00 41.22 3.13
579 580 1.750778 CACAGGCGCCAAATAGGAAAT 59.249 47.619 31.54 0.00 41.22 2.17
580 581 1.750778 ACAGGCGCCAAATAGGAAATG 59.249 47.619 31.54 16.35 41.22 2.32
581 582 0.746659 AGGCGCCAAATAGGAAATGC 59.253 50.000 31.54 0.00 41.22 3.56
582 583 0.746659 GGCGCCAAATAGGAAATGCT 59.253 50.000 24.80 0.00 41.22 3.79
583 584 1.536709 GGCGCCAAATAGGAAATGCTG 60.537 52.381 24.80 0.00 41.22 4.41
584 585 1.536709 GCGCCAAATAGGAAATGCTGG 60.537 52.381 0.00 0.00 41.22 4.85
585 586 1.067516 CGCCAAATAGGAAATGCTGGG 59.932 52.381 0.00 0.00 41.22 4.45
586 587 2.387757 GCCAAATAGGAAATGCTGGGA 58.612 47.619 0.00 0.00 41.22 4.37
587 588 2.363359 GCCAAATAGGAAATGCTGGGAG 59.637 50.000 0.00 0.00 41.22 4.30
588 589 3.902218 CCAAATAGGAAATGCTGGGAGA 58.098 45.455 0.00 0.00 41.22 3.71
589 590 4.280819 CCAAATAGGAAATGCTGGGAGAA 58.719 43.478 0.00 0.00 41.22 2.87
590 591 4.897670 CCAAATAGGAAATGCTGGGAGAAT 59.102 41.667 0.00 0.00 41.22 2.40
591 592 6.070656 CCAAATAGGAAATGCTGGGAGAATA 58.929 40.000 0.00 0.00 41.22 1.75
592 593 6.550854 CCAAATAGGAAATGCTGGGAGAATAA 59.449 38.462 0.00 0.00 41.22 1.40
593 594 7.069826 CCAAATAGGAAATGCTGGGAGAATAAA 59.930 37.037 0.00 0.00 41.22 1.40
594 595 8.645110 CAAATAGGAAATGCTGGGAGAATAAAT 58.355 33.333 0.00 0.00 0.00 1.40
595 596 9.881773 AAATAGGAAATGCTGGGAGAATAAATA 57.118 29.630 0.00 0.00 0.00 1.40
596 597 9.881773 AATAGGAAATGCTGGGAGAATAAATAA 57.118 29.630 0.00 0.00 0.00 1.40
597 598 9.881773 ATAGGAAATGCTGGGAGAATAAATAAA 57.118 29.630 0.00 0.00 0.00 1.40
598 599 8.242729 AGGAAATGCTGGGAGAATAAATAAAG 57.757 34.615 0.00 0.00 0.00 1.85
599 600 7.841222 AGGAAATGCTGGGAGAATAAATAAAGT 59.159 33.333 0.00 0.00 0.00 2.66
600 601 8.478066 GGAAATGCTGGGAGAATAAATAAAGTT 58.522 33.333 0.00 0.00 0.00 2.66
601 602 9.521503 GAAATGCTGGGAGAATAAATAAAGTTC 57.478 33.333 0.00 0.00 0.00 3.01
602 603 8.829373 AATGCTGGGAGAATAAATAAAGTTCT 57.171 30.769 0.00 0.00 35.06 3.01
603 604 9.920946 AATGCTGGGAGAATAAATAAAGTTCTA 57.079 29.630 0.00 0.00 32.67 2.10
604 605 8.732746 TGCTGGGAGAATAAATAAAGTTCTAC 57.267 34.615 0.00 0.00 32.67 2.59
605 606 8.325787 TGCTGGGAGAATAAATAAAGTTCTACA 58.674 33.333 0.00 0.00 35.05 2.74
606 607 8.831550 GCTGGGAGAATAAATAAAGTTCTACAG 58.168 37.037 11.19 11.19 38.60 2.74
607 608 9.892130 CTGGGAGAATAAATAAAGTTCTACAGT 57.108 33.333 0.00 0.00 35.05 3.55
641 642 4.771114 AAGGAAAGGAAAAAGGGTTTGG 57.229 40.909 0.00 0.00 0.00 3.28
642 643 3.731431 AGGAAAGGAAAAAGGGTTTGGT 58.269 40.909 0.00 0.00 0.00 3.67
643 644 4.108570 AGGAAAGGAAAAAGGGTTTGGTT 58.891 39.130 0.00 0.00 0.00 3.67
644 645 4.538490 AGGAAAGGAAAAAGGGTTTGGTTT 59.462 37.500 0.00 0.00 0.00 3.27
645 646 5.727279 AGGAAAGGAAAAAGGGTTTGGTTTA 59.273 36.000 0.00 0.00 0.00 2.01
646 647 5.818857 GGAAAGGAAAAAGGGTTTGGTTTAC 59.181 40.000 0.00 0.00 0.00 2.01
647 648 5.362105 AAGGAAAAAGGGTTTGGTTTACC 57.638 39.130 0.00 0.00 34.82 2.85
648 649 4.363573 AGGAAAAAGGGTTTGGTTTACCA 58.636 39.130 0.00 0.00 45.94 3.25
657 658 3.948425 TGGTTTACCAGGCCCAAAA 57.052 47.368 0.00 0.00 42.01 2.44
658 659 2.176247 TGGTTTACCAGGCCCAAAAA 57.824 45.000 0.00 0.00 42.01 1.94
675 676 2.857186 AAAAACATTGGGCCATGGTC 57.143 45.000 14.67 11.66 0.00 4.02
676 677 0.983467 AAAACATTGGGCCATGGTCC 59.017 50.000 29.54 29.54 41.01 4.46
677 678 1.257055 AAACATTGGGCCATGGTCCG 61.257 55.000 29.96 18.41 44.18 4.79
678 679 2.148723 AACATTGGGCCATGGTCCGA 62.149 55.000 27.98 27.98 44.18 4.55
679 680 2.120909 CATTGGGCCATGGTCCGAC 61.121 63.158 28.37 5.73 44.18 4.79
680 681 3.358932 ATTGGGCCATGGTCCGACC 62.359 63.158 28.37 12.24 44.18 4.79
683 684 4.041762 GGCCATGGTCCGACCCAA 62.042 66.667 14.67 0.00 37.50 4.12
684 685 2.750237 GCCATGGTCCGACCCAAC 60.750 66.667 14.67 0.00 37.50 3.77
685 686 2.753701 CCATGGTCCGACCCAACA 59.246 61.111 15.24 0.00 37.50 3.33
686 687 1.074072 CCATGGTCCGACCCAACAA 59.926 57.895 15.24 0.00 37.50 2.83
687 688 0.538516 CCATGGTCCGACCCAACAAA 60.539 55.000 15.24 0.00 37.50 2.83
688 689 1.323412 CATGGTCCGACCCAACAAAA 58.677 50.000 15.24 0.00 37.50 2.44
689 690 1.000717 CATGGTCCGACCCAACAAAAC 60.001 52.381 15.24 0.00 37.50 2.43
690 691 0.752376 TGGTCCGACCCAACAAAACC 60.752 55.000 15.24 0.00 37.50 3.27
691 692 0.752376 GGTCCGACCCAACAAAACCA 60.752 55.000 6.25 0.00 30.04 3.67
692 693 0.382873 GTCCGACCCAACAAAACCAC 59.617 55.000 0.00 0.00 0.00 4.16
693 694 0.752376 TCCGACCCAACAAAACCACC 60.752 55.000 0.00 0.00 0.00 4.61
694 695 1.357334 CGACCCAACAAAACCACCG 59.643 57.895 0.00 0.00 0.00 4.94
695 696 1.737201 GACCCAACAAAACCACCGG 59.263 57.895 0.00 0.00 0.00 5.28
696 697 1.000612 ACCCAACAAAACCACCGGT 59.999 52.632 0.00 0.00 37.65 5.28
697 698 1.038681 ACCCAACAAAACCACCGGTC 61.039 55.000 2.59 0.00 33.12 4.79
698 699 1.038130 CCCAACAAAACCACCGGTCA 61.038 55.000 2.59 0.00 33.12 4.02
699 700 0.383949 CCAACAAAACCACCGGTCAG 59.616 55.000 2.59 0.64 33.12 3.51
700 701 0.248866 CAACAAAACCACCGGTCAGC 60.249 55.000 2.59 0.00 33.12 4.26
701 702 1.388837 AACAAAACCACCGGTCAGCC 61.389 55.000 2.59 0.00 33.12 4.85
702 703 2.203437 AAAACCACCGGTCAGCCC 60.203 61.111 2.59 0.00 33.12 5.19
703 704 3.802852 AAAACCACCGGTCAGCCCC 62.803 63.158 2.59 0.00 33.12 5.80
707 708 3.006728 CACCGGTCAGCCCCCTAA 61.007 66.667 2.59 0.00 0.00 2.69
708 709 2.042261 ACCGGTCAGCCCCCTAAT 59.958 61.111 0.00 0.00 0.00 1.73
709 710 1.052124 CACCGGTCAGCCCCCTAATA 61.052 60.000 2.59 0.00 0.00 0.98
710 711 0.326808 ACCGGTCAGCCCCCTAATAA 60.327 55.000 0.00 0.00 0.00 1.40
711 712 1.064825 CCGGTCAGCCCCCTAATAAT 58.935 55.000 0.00 0.00 0.00 1.28
712 713 2.262637 CCGGTCAGCCCCCTAATAATA 58.737 52.381 0.00 0.00 0.00 0.98
713 714 2.640826 CCGGTCAGCCCCCTAATAATAA 59.359 50.000 0.00 0.00 0.00 1.40
714 715 3.265995 CCGGTCAGCCCCCTAATAATAAT 59.734 47.826 0.00 0.00 0.00 1.28
715 716 4.472108 CCGGTCAGCCCCCTAATAATAATA 59.528 45.833 0.00 0.00 0.00 0.98
716 717 5.045432 CCGGTCAGCCCCCTAATAATAATAA 60.045 44.000 0.00 0.00 0.00 1.40
717 718 6.353602 CCGGTCAGCCCCCTAATAATAATAAT 60.354 42.308 0.00 0.00 0.00 1.28
718 719 7.147444 CCGGTCAGCCCCCTAATAATAATAATA 60.147 40.741 0.00 0.00 0.00 0.98
719 720 8.269317 CGGTCAGCCCCCTAATAATAATAATAA 58.731 37.037 0.00 0.00 0.00 1.40
720 721 9.984590 GGTCAGCCCCCTAATAATAATAATAAA 57.015 33.333 0.00 0.00 0.00 1.40
741 742 9.884465 AATAAAAGAAGAAGAAGAAATCGTGTG 57.116 29.630 0.00 0.00 0.00 3.82
742 743 4.999751 AGAAGAAGAAGAAATCGTGTGC 57.000 40.909 0.00 0.00 0.00 4.57
743 744 3.748568 AGAAGAAGAAGAAATCGTGTGCC 59.251 43.478 0.00 0.00 0.00 5.01
744 745 2.427506 AGAAGAAGAAATCGTGTGCCC 58.572 47.619 0.00 0.00 0.00 5.36
745 746 2.039084 AGAAGAAGAAATCGTGTGCCCT 59.961 45.455 0.00 0.00 0.00 5.19
746 747 3.260884 AGAAGAAGAAATCGTGTGCCCTA 59.739 43.478 0.00 0.00 0.00 3.53
747 748 3.252974 AGAAGAAATCGTGTGCCCTAG 57.747 47.619 0.00 0.00 0.00 3.02
748 749 2.832129 AGAAGAAATCGTGTGCCCTAGA 59.168 45.455 0.00 0.00 0.00 2.43
749 750 2.674796 AGAAATCGTGTGCCCTAGAC 57.325 50.000 0.00 0.00 0.00 2.59
750 751 1.135083 AGAAATCGTGTGCCCTAGACG 60.135 52.381 0.00 0.00 46.41 4.18
751 752 0.606604 AAATCGTGTGCCCTAGACGT 59.393 50.000 0.00 0.00 45.37 4.34
752 753 1.466856 AATCGTGTGCCCTAGACGTA 58.533 50.000 0.00 0.00 45.37 3.57
753 754 0.737219 ATCGTGTGCCCTAGACGTAC 59.263 55.000 0.00 0.00 45.37 3.67
754 755 1.138247 CGTGTGCCCTAGACGTACC 59.862 63.158 0.00 0.00 40.79 3.34
755 756 1.310933 CGTGTGCCCTAGACGTACCT 61.311 60.000 0.00 0.00 40.79 3.08
756 757 0.455005 GTGTGCCCTAGACGTACCTC 59.545 60.000 0.00 0.00 0.00 3.85
757 758 0.038599 TGTGCCCTAGACGTACCTCA 59.961 55.000 0.00 0.00 0.00 3.86
758 759 0.455005 GTGCCCTAGACGTACCTCAC 59.545 60.000 0.00 0.00 0.00 3.51
759 760 0.682209 TGCCCTAGACGTACCTCACC 60.682 60.000 0.00 0.00 0.00 4.02
760 761 1.390383 GCCCTAGACGTACCTCACCC 61.390 65.000 0.00 0.00 0.00 4.61
761 762 0.033796 CCCTAGACGTACCTCACCCA 60.034 60.000 0.00 0.00 0.00 4.51
762 763 1.101331 CCTAGACGTACCTCACCCAC 58.899 60.000 0.00 0.00 0.00 4.61
763 764 1.101331 CTAGACGTACCTCACCCACC 58.899 60.000 0.00 0.00 0.00 4.61
764 765 0.323725 TAGACGTACCTCACCCACCC 60.324 60.000 0.00 0.00 0.00 4.61
765 766 1.909781 GACGTACCTCACCCACCCA 60.910 63.158 0.00 0.00 0.00 4.51
766 767 1.885163 GACGTACCTCACCCACCCAG 61.885 65.000 0.00 0.00 0.00 4.45
767 768 1.608336 CGTACCTCACCCACCCAGA 60.608 63.158 0.00 0.00 0.00 3.86
768 769 1.605058 CGTACCTCACCCACCCAGAG 61.605 65.000 0.00 0.00 0.00 3.35
769 770 1.612442 TACCTCACCCACCCAGAGC 60.612 63.158 0.00 0.00 0.00 4.09
770 771 3.721706 CCTCACCCACCCAGAGCC 61.722 72.222 0.00 0.00 0.00 4.70
771 772 2.930019 CTCACCCACCCAGAGCCA 60.930 66.667 0.00 0.00 0.00 4.75
772 773 2.449518 TCACCCACCCAGAGCCAA 60.450 61.111 0.00 0.00 0.00 4.52
773 774 1.852157 TCACCCACCCAGAGCCAAT 60.852 57.895 0.00 0.00 0.00 3.16
774 775 1.379044 CACCCACCCAGAGCCAATC 60.379 63.158 0.00 0.00 0.00 2.67
775 776 1.542375 ACCCACCCAGAGCCAATCT 60.542 57.895 0.00 0.00 39.56 2.40
776 777 1.225704 CCCACCCAGAGCCAATCTC 59.774 63.158 0.00 0.00 42.21 2.75
777 778 1.153289 CCACCCAGAGCCAATCTCG 60.153 63.158 0.00 0.00 46.44 4.04
778 779 1.817099 CACCCAGAGCCAATCTCGC 60.817 63.158 0.00 0.00 46.44 5.03
779 780 2.203126 CCCAGAGCCAATCTCGCC 60.203 66.667 0.00 0.00 46.44 5.54
780 781 2.739996 CCCAGAGCCAATCTCGCCT 61.740 63.158 0.00 0.00 46.44 5.52
781 782 1.227497 CCAGAGCCAATCTCGCCTC 60.227 63.158 0.00 0.00 46.44 4.70
782 783 1.227497 CAGAGCCAATCTCGCCTCC 60.227 63.158 0.00 0.00 46.44 4.30
783 784 2.110006 GAGCCAATCTCGCCTCCC 59.890 66.667 0.00 0.00 31.20 4.30
784 785 3.468326 GAGCCAATCTCGCCTCCCC 62.468 68.421 0.00 0.00 31.20 4.81
785 786 3.483869 GCCAATCTCGCCTCCCCT 61.484 66.667 0.00 0.00 0.00 4.79
786 787 2.825264 CCAATCTCGCCTCCCCTC 59.175 66.667 0.00 0.00 0.00 4.30
787 788 2.812619 CCAATCTCGCCTCCCCTCC 61.813 68.421 0.00 0.00 0.00 4.30
788 789 2.446802 AATCTCGCCTCCCCTCCC 60.447 66.667 0.00 0.00 0.00 4.30
789 790 4.565850 ATCTCGCCTCCCCTCCCC 62.566 72.222 0.00 0.00 0.00 4.81
2028 2111 4.814771 ACCAACTTCGTTGAAACTAAGGAG 59.185 41.667 8.21 4.35 45.28 3.69
2234 2362 0.820226 TCCAGATCTTGCAGGAGTCG 59.180 55.000 4.35 0.00 0.00 4.18
2418 3202 5.808042 TTCATGCTGCTCTTTTGTATCTC 57.192 39.130 0.00 0.00 0.00 2.75
2517 3301 2.225467 GAGCAAATCCAGCCTGTATCC 58.775 52.381 0.00 0.00 0.00 2.59
2526 3310 2.422519 CCAGCCTGTATCCAGATTTGCT 60.423 50.000 0.00 0.00 41.50 3.91
2567 3351 5.992217 AGACACCTGTTTGCTACTCTTAAAG 59.008 40.000 0.00 0.00 0.00 1.85
3240 4106 9.900710 TCTCTAATTTATTTCTATCTCGCAGAC 57.099 33.333 0.00 0.00 0.00 3.51
3244 4110 3.742433 ATTTCTATCTCGCAGACAGGG 57.258 47.619 0.00 0.00 0.00 4.45
3360 4226 2.001838 GGAGGGGAGGGGGTTCTTC 61.002 68.421 0.00 0.00 0.00 2.87
3364 4230 1.563577 GGGGAGGGGGTTCTTCTGTC 61.564 65.000 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.918022 AGAAACGATGAACTTTTCCAATTCAC 59.082 34.615 0.00 0.00 37.43 3.18
1 2 6.917477 CAGAAACGATGAACTTTTCCAATTCA 59.083 34.615 0.00 0.00 37.43 2.57
2 3 7.138736 TCAGAAACGATGAACTTTTCCAATTC 58.861 34.615 0.00 0.00 37.43 2.17
3 4 7.038154 TCAGAAACGATGAACTTTTCCAATT 57.962 32.000 0.00 0.00 37.43 2.32
4 5 6.633500 TCAGAAACGATGAACTTTTCCAAT 57.367 33.333 0.00 0.00 37.43 3.16
5 6 6.443934 TTCAGAAACGATGAACTTTTCCAA 57.556 33.333 0.00 0.00 37.43 3.53
6 7 6.443934 TTTCAGAAACGATGAACTTTTCCA 57.556 33.333 0.00 0.00 37.43 3.53
7 8 7.749539 TTTTTCAGAAACGATGAACTTTTCC 57.250 32.000 0.00 0.00 37.43 3.13
31 32 9.671279 ACTTTTCTTTTCAAATTGGATGAACTT 57.329 25.926 0.00 0.00 36.57 2.66
32 33 9.671279 AACTTTTCTTTTCAAATTGGATGAACT 57.329 25.926 0.00 0.00 36.57 3.01
33 34 9.920826 GAACTTTTCTTTTCAAATTGGATGAAC 57.079 29.630 0.00 0.00 36.57 3.18
34 35 9.664332 TGAACTTTTCTTTTCAAATTGGATGAA 57.336 25.926 0.00 0.00 35.11 2.57
35 36 9.835389 ATGAACTTTTCTTTTCAAATTGGATGA 57.165 25.926 0.00 0.00 35.42 2.92
65 66 8.934825 CCAAAATTTGTCAACTTCTTTCTCAAA 58.065 29.630 4.92 0.00 0.00 2.69
66 67 8.310382 TCCAAAATTTGTCAACTTCTTTCTCAA 58.690 29.630 4.92 0.00 0.00 3.02
67 68 7.835822 TCCAAAATTTGTCAACTTCTTTCTCA 58.164 30.769 4.92 0.00 0.00 3.27
68 69 8.702163 TTCCAAAATTTGTCAACTTCTTTCTC 57.298 30.769 4.92 0.00 0.00 2.87
69 70 9.500785 TTTTCCAAAATTTGTCAACTTCTTTCT 57.499 25.926 4.92 0.00 0.00 2.52
79 80 9.920133 TCGATGATATTTTTCCAAAATTTGTCA 57.080 25.926 4.92 0.00 0.00 3.58
86 87 9.973450 TTTGAGTTCGATGATATTTTTCCAAAA 57.027 25.926 0.00 0.00 0.00 2.44
87 88 9.973450 TTTTGAGTTCGATGATATTTTTCCAAA 57.027 25.926 0.00 0.00 0.00 3.28
88 89 9.973450 TTTTTGAGTTCGATGATATTTTTCCAA 57.027 25.926 0.00 0.00 0.00 3.53
140 141 7.587037 AGGATGAACTTTTCAAACTCATTGA 57.413 32.000 0.00 0.00 46.22 2.57
141 142 8.652810 AAAGGATGAACTTTTCAAACTCATTG 57.347 30.769 0.00 0.00 43.95 2.82
143 144 9.918630 CATAAAGGATGAACTTTTCAAACTCAT 57.081 29.630 0.00 0.00 43.95 2.90
144 145 9.130661 TCATAAAGGATGAACTTTTCAAACTCA 57.869 29.630 0.00 0.00 41.80 3.41
174 175 9.933723 CTTTTCTTTTCATATTGGATGAACCTT 57.066 29.630 0.00 0.00 37.71 3.50
175 176 9.093458 ACTTTTCTTTTCATATTGGATGAACCT 57.907 29.630 0.00 0.00 37.71 3.50
176 177 9.710900 AACTTTTCTTTTCATATTGGATGAACC 57.289 29.630 0.00 0.00 37.71 3.62
218 219 9.378551 GGTCTTTTTCCAAAACTAATGAACTTT 57.621 29.630 0.00 0.00 0.00 2.66
219 220 8.536175 TGGTCTTTTTCCAAAACTAATGAACTT 58.464 29.630 0.00 0.00 31.50 2.66
220 221 8.073467 TGGTCTTTTTCCAAAACTAATGAACT 57.927 30.769 0.00 0.00 31.50 3.01
221 222 8.887036 ATGGTCTTTTTCCAAAACTAATGAAC 57.113 30.769 0.00 0.00 38.52 3.18
222 223 7.865385 CGATGGTCTTTTTCCAAAACTAATGAA 59.135 33.333 0.00 0.00 38.52 2.57
223 224 7.229707 TCGATGGTCTTTTTCCAAAACTAATGA 59.770 33.333 0.00 0.00 38.52 2.57
224 225 7.367285 TCGATGGTCTTTTTCCAAAACTAATG 58.633 34.615 0.00 0.00 38.52 1.90
225 226 7.519032 TCGATGGTCTTTTTCCAAAACTAAT 57.481 32.000 0.00 0.00 38.52 1.73
226 227 6.945938 TCGATGGTCTTTTTCCAAAACTAA 57.054 33.333 0.00 0.00 38.52 2.24
227 228 6.544564 AGTTCGATGGTCTTTTTCCAAAACTA 59.455 34.615 0.00 0.00 38.52 2.24
228 229 5.359860 AGTTCGATGGTCTTTTTCCAAAACT 59.640 36.000 0.00 0.00 38.52 2.66
229 230 5.588240 AGTTCGATGGTCTTTTTCCAAAAC 58.412 37.500 0.00 0.00 38.52 2.43
230 231 5.845391 AGTTCGATGGTCTTTTTCCAAAA 57.155 34.783 0.00 0.00 38.52 2.44
231 232 5.358442 TCAAGTTCGATGGTCTTTTTCCAAA 59.642 36.000 0.00 0.00 38.52 3.28
232 233 4.884744 TCAAGTTCGATGGTCTTTTTCCAA 59.115 37.500 0.00 0.00 38.52 3.53
233 234 4.456535 TCAAGTTCGATGGTCTTTTTCCA 58.543 39.130 0.00 0.00 39.41 3.53
234 235 5.238650 TCTTCAAGTTCGATGGTCTTTTTCC 59.761 40.000 0.00 0.00 0.00 3.13
235 236 6.300354 TCTTCAAGTTCGATGGTCTTTTTC 57.700 37.500 0.00 0.00 0.00 2.29
236 237 6.884280 ATCTTCAAGTTCGATGGTCTTTTT 57.116 33.333 0.00 0.00 0.00 1.94
237 238 6.884280 AATCTTCAAGTTCGATGGTCTTTT 57.116 33.333 0.00 0.00 0.00 2.27
238 239 6.884280 AAATCTTCAAGTTCGATGGTCTTT 57.116 33.333 0.00 0.00 0.00 2.52
239 240 6.486657 TCAAAATCTTCAAGTTCGATGGTCTT 59.513 34.615 0.00 0.00 0.00 3.01
240 241 5.997746 TCAAAATCTTCAAGTTCGATGGTCT 59.002 36.000 0.00 0.00 0.00 3.85
241 242 6.241207 TCAAAATCTTCAAGTTCGATGGTC 57.759 37.500 0.00 0.00 0.00 4.02
242 243 6.633500 TTCAAAATCTTCAAGTTCGATGGT 57.367 33.333 0.00 0.00 0.00 3.55
243 244 7.928908 TTTTCAAAATCTTCAAGTTCGATGG 57.071 32.000 0.00 0.00 0.00 3.51
322 323 9.579768 TCAAAATCGATGAACTTTCTTTCAAAA 57.420 25.926 0.00 0.00 38.95 2.44
323 324 9.236691 CTCAAAATCGATGAACTTTCTTTCAAA 57.763 29.630 0.00 0.00 38.95 2.69
324 325 8.620416 TCTCAAAATCGATGAACTTTCTTTCAA 58.380 29.630 0.00 0.00 38.95 2.69
325 326 8.153479 TCTCAAAATCGATGAACTTTCTTTCA 57.847 30.769 0.00 0.00 39.79 2.69
326 327 9.450807 TTTCTCAAAATCGATGAACTTTCTTTC 57.549 29.630 0.00 0.00 0.00 2.62
327 328 9.801873 TTTTCTCAAAATCGATGAACTTTCTTT 57.198 25.926 0.00 0.00 0.00 2.52
328 329 9.801873 TTTTTCTCAAAATCGATGAACTTTCTT 57.198 25.926 0.00 0.00 0.00 2.52
329 330 9.455847 CTTTTTCTCAAAATCGATGAACTTTCT 57.544 29.630 0.00 0.00 31.28 2.52
330 331 9.237846 ACTTTTTCTCAAAATCGATGAACTTTC 57.762 29.630 0.00 0.00 31.28 2.62
331 332 9.023967 CACTTTTTCTCAAAATCGATGAACTTT 57.976 29.630 0.00 0.00 31.28 2.66
332 333 7.168135 GCACTTTTTCTCAAAATCGATGAACTT 59.832 33.333 0.00 0.00 31.28 2.66
333 334 6.638468 GCACTTTTTCTCAAAATCGATGAACT 59.362 34.615 0.00 0.00 31.28 3.01
334 335 6.417635 TGCACTTTTTCTCAAAATCGATGAAC 59.582 34.615 0.00 0.00 31.28 3.18
335 336 6.502652 TGCACTTTTTCTCAAAATCGATGAA 58.497 32.000 0.00 0.00 31.28 2.57
336 337 6.070897 TGCACTTTTTCTCAAAATCGATGA 57.929 33.333 0.00 0.00 31.28 2.92
337 338 6.237123 CGATGCACTTTTTCTCAAAATCGATG 60.237 38.462 0.00 0.00 33.87 3.84
338 339 5.796935 CGATGCACTTTTTCTCAAAATCGAT 59.203 36.000 0.00 0.00 33.87 3.59
339 340 5.049749 TCGATGCACTTTTTCTCAAAATCGA 60.050 36.000 0.00 0.00 36.64 3.59
340 341 5.146460 TCGATGCACTTTTTCTCAAAATCG 58.854 37.500 0.00 0.00 33.55 3.34
341 342 7.572502 AATCGATGCACTTTTTCTCAAAATC 57.427 32.000 0.00 0.00 31.28 2.17
342 343 7.951530 AAATCGATGCACTTTTTCTCAAAAT 57.048 28.000 0.00 0.00 31.28 1.82
343 344 7.490725 TCAAAATCGATGCACTTTTTCTCAAAA 59.509 29.630 0.00 0.00 0.00 2.44
344 345 6.977502 TCAAAATCGATGCACTTTTTCTCAAA 59.022 30.769 0.00 0.00 0.00 2.69
345 346 6.502652 TCAAAATCGATGCACTTTTTCTCAA 58.497 32.000 0.00 0.00 0.00 3.02
346 347 6.070897 TCAAAATCGATGCACTTTTTCTCA 57.929 33.333 0.00 0.00 0.00 3.27
347 348 6.991485 TTCAAAATCGATGCACTTTTTCTC 57.009 33.333 0.00 0.00 0.00 2.87
348 349 7.769272 TTTTCAAAATCGATGCACTTTTTCT 57.231 28.000 0.00 0.00 0.00 2.52
349 350 8.992287 ATTTTTCAAAATCGATGCACTTTTTC 57.008 26.923 0.00 0.00 33.54 2.29
352 353 8.223100 GCTAATTTTTCAAAATCGATGCACTTT 58.777 29.630 0.00 0.00 37.62 2.66
353 354 7.410728 CGCTAATTTTTCAAAATCGATGCACTT 60.411 33.333 0.00 0.00 37.62 3.16
354 355 6.033831 CGCTAATTTTTCAAAATCGATGCACT 59.966 34.615 0.00 0.00 37.62 4.40
355 356 6.171006 CGCTAATTTTTCAAAATCGATGCAC 58.829 36.000 0.00 0.00 37.62 4.57
356 357 5.220191 GCGCTAATTTTTCAAAATCGATGCA 60.220 36.000 0.00 0.00 37.62 3.96
357 358 5.183209 GCGCTAATTTTTCAAAATCGATGC 58.817 37.500 0.00 0.00 37.62 3.91
358 359 6.316591 TGCGCTAATTTTTCAAAATCGATG 57.683 33.333 9.73 0.00 37.62 3.84
359 360 7.524294 AATGCGCTAATTTTTCAAAATCGAT 57.476 28.000 9.73 0.00 37.62 3.59
360 361 6.942886 AATGCGCTAATTTTTCAAAATCGA 57.057 29.167 9.73 0.00 37.62 3.59
361 362 9.186938 CTTAAATGCGCTAATTTTTCAAAATCG 57.813 29.630 9.73 0.31 37.62 3.34
371 372 9.691362 TCTTCTTTTTCTTAAATGCGCTAATTT 57.309 25.926 9.73 10.01 34.24 1.82
372 373 9.691362 TTCTTCTTTTTCTTAAATGCGCTAATT 57.309 25.926 9.73 3.38 0.00 1.40
373 374 9.691362 TTTCTTCTTTTTCTTAAATGCGCTAAT 57.309 25.926 9.73 0.00 0.00 1.73
374 375 9.522804 TTTTCTTCTTTTTCTTAAATGCGCTAA 57.477 25.926 9.73 0.00 0.00 3.09
375 376 9.522804 TTTTTCTTCTTTTTCTTAAATGCGCTA 57.477 25.926 9.73 0.00 0.00 4.26
376 377 8.328146 GTTTTTCTTCTTTTTCTTAAATGCGCT 58.672 29.630 9.73 0.00 0.00 5.92
377 378 8.113675 TGTTTTTCTTCTTTTTCTTAAATGCGC 58.886 29.630 0.00 0.00 0.00 6.09
378 379 9.623687 CTGTTTTTCTTCTTTTTCTTAAATGCG 57.376 29.630 0.00 0.00 0.00 4.73
379 380 9.920826 CCTGTTTTTCTTCTTTTTCTTAAATGC 57.079 29.630 0.00 0.00 0.00 3.56
386 387 9.996554 TCTTTTTCCTGTTTTTCTTCTTTTTCT 57.003 25.926 0.00 0.00 0.00 2.52
398 399 9.391006 GGGAAACTTTTATCTTTTTCCTGTTTT 57.609 29.630 10.85 0.00 44.39 2.43
399 400 7.990886 GGGGAAACTTTTATCTTTTTCCTGTTT 59.009 33.333 10.85 0.00 44.39 2.83
400 401 7.126573 TGGGGAAACTTTTATCTTTTTCCTGTT 59.873 33.333 10.85 0.00 44.39 3.16
401 402 6.613679 TGGGGAAACTTTTATCTTTTTCCTGT 59.386 34.615 10.85 0.00 44.39 4.00
402 403 7.061566 TGGGGAAACTTTTATCTTTTTCCTG 57.938 36.000 10.85 0.00 44.39 3.86
403 404 7.506114 GTTGGGGAAACTTTTATCTTTTTCCT 58.494 34.615 10.85 0.00 44.39 3.36
404 405 7.724305 GTTGGGGAAACTTTTATCTTTTTCC 57.276 36.000 3.75 3.75 44.29 3.13
418 419 8.857098 ACTTTTATTCTCTTTAGTTGGGGAAAC 58.143 33.333 0.00 0.00 39.24 2.78
419 420 8.856103 CACTTTTATTCTCTTTAGTTGGGGAAA 58.144 33.333 0.00 0.00 0.00 3.13
420 421 7.450323 CCACTTTTATTCTCTTTAGTTGGGGAA 59.550 37.037 0.00 0.00 0.00 3.97
421 422 6.946009 CCACTTTTATTCTCTTTAGTTGGGGA 59.054 38.462 0.00 0.00 0.00 4.81
422 423 6.152831 CCCACTTTTATTCTCTTTAGTTGGGG 59.847 42.308 0.00 0.00 0.00 4.96
423 424 6.946009 TCCCACTTTTATTCTCTTTAGTTGGG 59.054 38.462 0.00 0.00 0.00 4.12
424 425 7.996098 TCCCACTTTTATTCTCTTTAGTTGG 57.004 36.000 0.00 0.00 0.00 3.77
425 426 9.899226 CTTTCCCACTTTTATTCTCTTTAGTTG 57.101 33.333 0.00 0.00 0.00 3.16
426 427 9.078990 CCTTTCCCACTTTTATTCTCTTTAGTT 57.921 33.333 0.00 0.00 0.00 2.24
427 428 8.445588 TCCTTTCCCACTTTTATTCTCTTTAGT 58.554 33.333 0.00 0.00 0.00 2.24
428 429 8.863872 TCCTTTCCCACTTTTATTCTCTTTAG 57.136 34.615 0.00 0.00 0.00 1.85
429 430 9.074576 GTTCCTTTCCCACTTTTATTCTCTTTA 57.925 33.333 0.00 0.00 0.00 1.85
430 431 7.785028 AGTTCCTTTCCCACTTTTATTCTCTTT 59.215 33.333 0.00 0.00 0.00 2.52
431 432 7.298374 AGTTCCTTTCCCACTTTTATTCTCTT 58.702 34.615 0.00 0.00 0.00 2.85
432 433 6.853490 AGTTCCTTTCCCACTTTTATTCTCT 58.147 36.000 0.00 0.00 0.00 3.10
433 434 8.678199 CATAGTTCCTTTCCCACTTTTATTCTC 58.322 37.037 0.00 0.00 0.00 2.87
434 435 8.170730 ACATAGTTCCTTTCCCACTTTTATTCT 58.829 33.333 0.00 0.00 0.00 2.40
435 436 8.349568 ACATAGTTCCTTTCCCACTTTTATTC 57.650 34.615 0.00 0.00 0.00 1.75
436 437 8.585018 CAACATAGTTCCTTTCCCACTTTTATT 58.415 33.333 0.00 0.00 0.00 1.40
437 438 7.178451 CCAACATAGTTCCTTTCCCACTTTTAT 59.822 37.037 0.00 0.00 0.00 1.40
438 439 6.492087 CCAACATAGTTCCTTTCCCACTTTTA 59.508 38.462 0.00 0.00 0.00 1.52
439 440 5.304357 CCAACATAGTTCCTTTCCCACTTTT 59.696 40.000 0.00 0.00 0.00 2.27
440 441 4.832823 CCAACATAGTTCCTTTCCCACTTT 59.167 41.667 0.00 0.00 0.00 2.66
441 442 4.407365 CCAACATAGTTCCTTTCCCACTT 58.593 43.478 0.00 0.00 0.00 3.16
442 443 3.814316 GCCAACATAGTTCCTTTCCCACT 60.814 47.826 0.00 0.00 0.00 4.00
443 444 2.492088 GCCAACATAGTTCCTTTCCCAC 59.508 50.000 0.00 0.00 0.00 4.61
444 445 2.109128 TGCCAACATAGTTCCTTTCCCA 59.891 45.455 0.00 0.00 0.00 4.37
445 446 2.802719 TGCCAACATAGTTCCTTTCCC 58.197 47.619 0.00 0.00 0.00 3.97
446 447 4.864704 TTTGCCAACATAGTTCCTTTCC 57.135 40.909 0.00 0.00 0.00 3.13
447 448 6.691508 AGAATTTGCCAACATAGTTCCTTTC 58.308 36.000 0.00 0.00 0.00 2.62
448 449 6.670695 AGAATTTGCCAACATAGTTCCTTT 57.329 33.333 0.00 0.00 0.00 3.11
449 450 7.201732 CGATAGAATTTGCCAACATAGTTCCTT 60.202 37.037 0.00 0.00 39.76 3.36
450 451 6.260936 CGATAGAATTTGCCAACATAGTTCCT 59.739 38.462 0.00 0.00 39.76 3.36
451 452 6.260050 TCGATAGAATTTGCCAACATAGTTCC 59.740 38.462 0.00 0.00 46.15 3.62
452 453 7.246674 TCGATAGAATTTGCCAACATAGTTC 57.753 36.000 0.00 0.00 46.15 3.01
470 471 4.527509 AACCACTATGCCATCTCGATAG 57.472 45.455 0.00 0.00 0.00 2.08
471 472 4.830600 TGTAACCACTATGCCATCTCGATA 59.169 41.667 0.00 0.00 0.00 2.92
472 473 3.641436 TGTAACCACTATGCCATCTCGAT 59.359 43.478 0.00 0.00 0.00 3.59
473 474 3.028130 TGTAACCACTATGCCATCTCGA 58.972 45.455 0.00 0.00 0.00 4.04
474 475 3.452755 TGTAACCACTATGCCATCTCG 57.547 47.619 0.00 0.00 0.00 4.04
475 476 3.555956 CGTTGTAACCACTATGCCATCTC 59.444 47.826 0.00 0.00 0.00 2.75
476 477 3.531538 CGTTGTAACCACTATGCCATCT 58.468 45.455 0.00 0.00 0.00 2.90
477 478 2.612212 CCGTTGTAACCACTATGCCATC 59.388 50.000 0.00 0.00 0.00 3.51
478 479 2.026636 ACCGTTGTAACCACTATGCCAT 60.027 45.455 0.00 0.00 0.00 4.40
479 480 1.348366 ACCGTTGTAACCACTATGCCA 59.652 47.619 0.00 0.00 0.00 4.92
480 481 2.103537 ACCGTTGTAACCACTATGCC 57.896 50.000 0.00 0.00 0.00 4.40
481 482 3.001939 GCATACCGTTGTAACCACTATGC 59.998 47.826 8.78 8.78 31.07 3.14
482 483 4.439057 AGCATACCGTTGTAACCACTATG 58.561 43.478 0.00 0.00 0.00 2.23
483 484 4.404715 AGAGCATACCGTTGTAACCACTAT 59.595 41.667 0.00 0.00 0.00 2.12
484 485 3.765511 AGAGCATACCGTTGTAACCACTA 59.234 43.478 0.00 0.00 0.00 2.74
485 486 2.565834 AGAGCATACCGTTGTAACCACT 59.434 45.455 0.00 0.00 0.00 4.00
486 487 2.671396 CAGAGCATACCGTTGTAACCAC 59.329 50.000 0.00 0.00 0.00 4.16
487 488 2.563620 TCAGAGCATACCGTTGTAACCA 59.436 45.455 0.00 0.00 0.00 3.67
488 489 2.928116 GTCAGAGCATACCGTTGTAACC 59.072 50.000 0.00 0.00 0.00 2.85
489 490 3.846360 AGTCAGAGCATACCGTTGTAAC 58.154 45.455 0.00 0.00 0.00 2.50
490 491 3.427098 CGAGTCAGAGCATACCGTTGTAA 60.427 47.826 0.00 0.00 0.00 2.41
491 492 2.096980 CGAGTCAGAGCATACCGTTGTA 59.903 50.000 0.00 0.00 0.00 2.41
492 493 1.135373 CGAGTCAGAGCATACCGTTGT 60.135 52.381 0.00 0.00 0.00 3.32
493 494 1.132453 TCGAGTCAGAGCATACCGTTG 59.868 52.381 0.00 0.00 0.00 4.10
494 495 1.402259 CTCGAGTCAGAGCATACCGTT 59.598 52.381 3.62 0.00 0.00 4.44
495 496 1.018148 CTCGAGTCAGAGCATACCGT 58.982 55.000 3.62 0.00 0.00 4.83
496 497 1.262950 CTCTCGAGTCAGAGCATACCG 59.737 57.143 13.13 0.00 38.12 4.02
497 498 1.606668 CCTCTCGAGTCAGAGCATACC 59.393 57.143 13.13 0.00 38.98 2.73
498 499 2.289547 GACCTCTCGAGTCAGAGCATAC 59.710 54.545 13.13 0.00 38.98 2.39
499 500 2.171659 AGACCTCTCGAGTCAGAGCATA 59.828 50.000 13.13 0.00 38.98 3.14
500 501 1.064758 AGACCTCTCGAGTCAGAGCAT 60.065 52.381 13.13 0.00 38.98 3.79
501 502 0.326595 AGACCTCTCGAGTCAGAGCA 59.673 55.000 13.13 0.00 38.98 4.26
502 503 1.014352 GAGACCTCTCGAGTCAGAGC 58.986 60.000 13.13 0.00 38.98 4.09
512 513 4.352887 CGGTTTAGAAATCGAGACCTCTC 58.647 47.826 1.36 0.00 44.89 3.20
513 514 3.429135 GCGGTTTAGAAATCGAGACCTCT 60.429 47.826 11.68 0.00 44.89 3.69
514 515 2.858941 GCGGTTTAGAAATCGAGACCTC 59.141 50.000 11.68 0.00 44.89 3.85
515 516 2.418334 GGCGGTTTAGAAATCGAGACCT 60.418 50.000 11.68 0.00 44.89 3.85
516 517 1.931841 GGCGGTTTAGAAATCGAGACC 59.068 52.381 11.68 0.03 44.89 3.85
517 518 1.587034 CGGCGGTTTAGAAATCGAGAC 59.413 52.381 11.68 0.58 44.89 3.36
518 519 1.470285 CCGGCGGTTTAGAAATCGAGA 60.470 52.381 19.97 0.00 44.89 4.04
519 520 0.928229 CCGGCGGTTTAGAAATCGAG 59.072 55.000 19.97 4.57 44.89 4.04
520 521 0.460635 CCCGGCGGTTTAGAAATCGA 60.461 55.000 26.32 0.00 44.89 3.59
521 522 2.011453 CCCGGCGGTTTAGAAATCG 58.989 57.895 26.32 3.29 44.89 3.34
522 523 1.725665 GCCCGGCGGTTTAGAAATC 59.274 57.895 26.32 0.00 0.00 2.17
523 524 3.914094 GCCCGGCGGTTTAGAAAT 58.086 55.556 26.32 0.00 0.00 2.17
536 537 3.431725 GAGGAAAAGGTGCGCCCG 61.432 66.667 14.07 0.00 38.74 6.13
537 538 3.062466 GGAGGAAAAGGTGCGCCC 61.062 66.667 14.07 5.76 30.79 6.13
538 539 3.431725 CGGAGGAAAAGGTGCGCC 61.432 66.667 8.71 8.71 33.94 6.53
539 540 4.103103 GCGGAGGAAAAGGTGCGC 62.103 66.667 0.00 0.00 46.24 6.09
540 541 3.788766 CGCGGAGGAAAAGGTGCG 61.789 66.667 0.00 0.00 39.57 5.34
541 542 4.103103 GCGCGGAGGAAAAGGTGC 62.103 66.667 8.83 0.00 0.00 5.01
542 543 3.431725 GGCGCGGAGGAAAAGGTG 61.432 66.667 8.83 0.00 0.00 4.00
543 544 3.948719 TGGCGCGGAGGAAAAGGT 61.949 61.111 8.83 0.00 0.00 3.50
544 545 3.431725 GTGGCGCGGAGGAAAAGG 61.432 66.667 8.83 0.00 0.00 3.11
545 546 2.668212 TGTGGCGCGGAGGAAAAG 60.668 61.111 8.83 0.00 0.00 2.27
546 547 2.668212 CTGTGGCGCGGAGGAAAA 60.668 61.111 8.83 0.00 0.00 2.29
547 548 4.697756 CCTGTGGCGCGGAGGAAA 62.698 66.667 8.83 0.00 0.00 3.13
557 558 2.774799 CCTATTTGGCGCCTGTGGC 61.775 63.158 29.70 0.00 46.75 5.01
558 559 0.679640 TTCCTATTTGGCGCCTGTGG 60.680 55.000 29.70 20.85 35.26 4.17
559 560 1.173043 TTTCCTATTTGGCGCCTGTG 58.827 50.000 29.70 12.78 35.26 3.66
560 561 1.750778 CATTTCCTATTTGGCGCCTGT 59.249 47.619 29.70 15.71 35.26 4.00
561 562 1.536709 GCATTTCCTATTTGGCGCCTG 60.537 52.381 29.70 14.35 35.26 4.85
562 563 0.746659 GCATTTCCTATTTGGCGCCT 59.253 50.000 29.70 10.43 35.26 5.52
563 564 0.746659 AGCATTTCCTATTTGGCGCC 59.253 50.000 22.73 22.73 35.26 6.53
564 565 1.536709 CCAGCATTTCCTATTTGGCGC 60.537 52.381 0.00 0.00 35.26 6.53
565 566 1.067516 CCCAGCATTTCCTATTTGGCG 59.932 52.381 0.00 0.00 35.26 5.69
566 567 2.363359 CTCCCAGCATTTCCTATTTGGC 59.637 50.000 0.00 0.00 35.26 4.52
567 568 3.902218 TCTCCCAGCATTTCCTATTTGG 58.098 45.455 0.00 0.00 37.10 3.28
568 569 7.587037 TTATTCTCCCAGCATTTCCTATTTG 57.413 36.000 0.00 0.00 0.00 2.32
569 570 8.788238 ATTTATTCTCCCAGCATTTCCTATTT 57.212 30.769 0.00 0.00 0.00 1.40
570 571 9.881773 TTATTTATTCTCCCAGCATTTCCTATT 57.118 29.630 0.00 0.00 0.00 1.73
571 572 9.881773 TTTATTTATTCTCCCAGCATTTCCTAT 57.118 29.630 0.00 0.00 0.00 2.57
572 573 9.354673 CTTTATTTATTCTCCCAGCATTTCCTA 57.645 33.333 0.00 0.00 0.00 2.94
573 574 7.841222 ACTTTATTTATTCTCCCAGCATTTCCT 59.159 33.333 0.00 0.00 0.00 3.36
574 575 8.011844 ACTTTATTTATTCTCCCAGCATTTCC 57.988 34.615 0.00 0.00 0.00 3.13
575 576 9.521503 GAACTTTATTTATTCTCCCAGCATTTC 57.478 33.333 0.00 0.00 0.00 2.17
576 577 9.259832 AGAACTTTATTTATTCTCCCAGCATTT 57.740 29.630 0.00 0.00 0.00 2.32
577 578 8.829373 AGAACTTTATTTATTCTCCCAGCATT 57.171 30.769 0.00 0.00 0.00 3.56
578 579 9.343539 GTAGAACTTTATTTATTCTCCCAGCAT 57.656 33.333 0.00 0.00 34.55 3.79
579 580 8.325787 TGTAGAACTTTATTTATTCTCCCAGCA 58.674 33.333 0.00 0.00 34.55 4.41
580 581 8.732746 TGTAGAACTTTATTTATTCTCCCAGC 57.267 34.615 0.00 0.00 34.55 4.85
581 582 9.892130 ACTGTAGAACTTTATTTATTCTCCCAG 57.108 33.333 0.00 0.00 37.46 4.45
617 618 5.949354 CCAAACCCTTTTTCCTTTCCTTTTT 59.051 36.000 0.00 0.00 0.00 1.94
618 619 5.014755 ACCAAACCCTTTTTCCTTTCCTTTT 59.985 36.000 0.00 0.00 0.00 2.27
619 620 4.538490 ACCAAACCCTTTTTCCTTTCCTTT 59.462 37.500 0.00 0.00 0.00 3.11
620 621 4.108570 ACCAAACCCTTTTTCCTTTCCTT 58.891 39.130 0.00 0.00 0.00 3.36
621 622 3.731431 ACCAAACCCTTTTTCCTTTCCT 58.269 40.909 0.00 0.00 0.00 3.36
622 623 4.497291 AACCAAACCCTTTTTCCTTTCC 57.503 40.909 0.00 0.00 0.00 3.13
623 624 5.818857 GGTAAACCAAACCCTTTTTCCTTTC 59.181 40.000 0.00 0.00 35.64 2.62
624 625 5.251005 TGGTAAACCAAACCCTTTTTCCTTT 59.749 36.000 0.00 0.00 44.35 3.11
625 626 4.783763 TGGTAAACCAAACCCTTTTTCCTT 59.216 37.500 0.00 0.00 44.35 3.36
626 627 4.363573 TGGTAAACCAAACCCTTTTTCCT 58.636 39.130 0.00 0.00 44.35 3.36
627 628 4.443739 CCTGGTAAACCAAACCCTTTTTCC 60.444 45.833 2.97 0.00 46.97 3.13
628 629 4.699637 CCTGGTAAACCAAACCCTTTTTC 58.300 43.478 2.97 0.00 46.97 2.29
629 630 3.118186 GCCTGGTAAACCAAACCCTTTTT 60.118 43.478 2.97 0.00 46.97 1.94
630 631 2.436542 GCCTGGTAAACCAAACCCTTTT 59.563 45.455 2.97 0.00 46.97 2.27
631 632 2.043992 GCCTGGTAAACCAAACCCTTT 58.956 47.619 2.97 0.00 46.97 3.11
632 633 1.712056 GCCTGGTAAACCAAACCCTT 58.288 50.000 2.97 0.00 46.97 3.95
633 634 0.178944 GGCCTGGTAAACCAAACCCT 60.179 55.000 2.97 0.00 46.97 4.34
634 635 2.358039 GGCCTGGTAAACCAAACCC 58.642 57.895 2.97 0.52 46.97 4.11
635 636 0.470268 TGGGCCTGGTAAACCAAACC 60.470 55.000 4.53 7.34 46.97 3.27
636 637 1.415200 TTGGGCCTGGTAAACCAAAC 58.585 50.000 4.53 0.00 46.97 2.93
637 638 2.176247 TTTGGGCCTGGTAAACCAAA 57.824 45.000 17.06 17.06 46.97 3.28
638 639 2.176247 TTTTGGGCCTGGTAAACCAA 57.824 45.000 4.53 9.23 46.97 3.67
639 640 2.176247 TTTTTGGGCCTGGTAAACCA 57.824 45.000 4.53 1.13 45.30 3.67
656 657 1.350684 GGACCATGGCCCAATGTTTTT 59.649 47.619 13.05 0.00 0.00 1.94
657 658 0.983467 GGACCATGGCCCAATGTTTT 59.017 50.000 13.05 0.00 0.00 2.43
658 659 1.257055 CGGACCATGGCCCAATGTTT 61.257 55.000 18.23 0.00 0.00 2.83
659 660 1.682005 CGGACCATGGCCCAATGTT 60.682 57.895 18.23 0.00 0.00 2.71
660 661 2.044053 CGGACCATGGCCCAATGT 60.044 61.111 18.23 0.00 0.00 2.71
661 662 2.120909 GTCGGACCATGGCCCAATG 61.121 63.158 18.23 0.67 0.00 2.82
662 663 2.275418 GTCGGACCATGGCCCAAT 59.725 61.111 18.23 0.00 0.00 3.16
663 664 4.041762 GGTCGGACCATGGCCCAA 62.042 66.667 22.10 0.00 38.42 4.12
666 667 4.041762 TTGGGTCGGACCATGGCC 62.042 66.667 27.32 13.33 41.02 5.36
667 668 2.750237 GTTGGGTCGGACCATGGC 60.750 66.667 27.32 11.41 41.02 4.40
668 669 0.538516 TTTGTTGGGTCGGACCATGG 60.539 55.000 27.32 11.19 41.02 3.66
669 670 1.000717 GTTTTGTTGGGTCGGACCATG 60.001 52.381 27.32 0.00 41.02 3.66
670 671 1.324383 GTTTTGTTGGGTCGGACCAT 58.676 50.000 27.32 0.00 41.02 3.55
671 672 0.752376 GGTTTTGTTGGGTCGGACCA 60.752 55.000 27.32 11.77 41.02 4.02
672 673 0.752376 TGGTTTTGTTGGGTCGGACC 60.752 55.000 19.06 19.06 37.60 4.46
673 674 0.382873 GTGGTTTTGTTGGGTCGGAC 59.617 55.000 0.00 0.00 0.00 4.79
674 675 0.752376 GGTGGTTTTGTTGGGTCGGA 60.752 55.000 0.00 0.00 0.00 4.55
675 676 1.737201 GGTGGTTTTGTTGGGTCGG 59.263 57.895 0.00 0.00 0.00 4.79
676 677 1.357334 CGGTGGTTTTGTTGGGTCG 59.643 57.895 0.00 0.00 0.00 4.79
677 678 1.038681 ACCGGTGGTTTTGTTGGGTC 61.039 55.000 6.12 0.00 27.29 4.46
678 679 1.000612 ACCGGTGGTTTTGTTGGGT 59.999 52.632 6.12 0.00 27.29 4.51
679 680 1.038130 TGACCGGTGGTTTTGTTGGG 61.038 55.000 14.63 0.00 35.25 4.12
680 681 0.383949 CTGACCGGTGGTTTTGTTGG 59.616 55.000 14.63 0.00 35.25 3.77
681 682 0.248866 GCTGACCGGTGGTTTTGTTG 60.249 55.000 14.63 0.00 35.25 3.33
682 683 1.388837 GGCTGACCGGTGGTTTTGTT 61.389 55.000 14.63 0.00 35.25 2.83
683 684 1.826487 GGCTGACCGGTGGTTTTGT 60.826 57.895 14.63 0.00 35.25 2.83
684 685 2.561037 GGGCTGACCGGTGGTTTTG 61.561 63.158 14.63 0.00 35.25 2.44
685 686 2.203437 GGGCTGACCGGTGGTTTT 60.203 61.111 14.63 0.00 35.25 2.43
686 687 4.280019 GGGGCTGACCGGTGGTTT 62.280 66.667 14.63 0.00 41.60 3.27
690 691 1.052124 TATTAGGGGGCTGACCGGTG 61.052 60.000 14.63 0.00 41.60 4.94
691 692 0.326808 TTATTAGGGGGCTGACCGGT 60.327 55.000 6.92 6.92 41.60 5.28
692 693 1.064825 ATTATTAGGGGGCTGACCGG 58.935 55.000 0.00 0.00 41.60 5.28
693 694 4.569719 ATTATTATTAGGGGGCTGACCG 57.430 45.455 0.00 0.00 41.60 4.79
694 695 9.984590 TTTATTATTATTATTAGGGGGCTGACC 57.015 33.333 0.00 0.00 39.11 4.02
715 716 9.884465 CACACGATTTCTTCTTCTTCTTTTATT 57.116 29.630 0.00 0.00 0.00 1.40
716 717 8.017946 GCACACGATTTCTTCTTCTTCTTTTAT 58.982 33.333 0.00 0.00 0.00 1.40
717 718 7.352739 GCACACGATTTCTTCTTCTTCTTTTA 58.647 34.615 0.00 0.00 0.00 1.52
718 719 6.202226 GCACACGATTTCTTCTTCTTCTTTT 58.798 36.000 0.00 0.00 0.00 2.27
719 720 5.278022 GGCACACGATTTCTTCTTCTTCTTT 60.278 40.000 0.00 0.00 0.00 2.52
720 721 4.214332 GGCACACGATTTCTTCTTCTTCTT 59.786 41.667 0.00 0.00 0.00 2.52
721 722 3.748568 GGCACACGATTTCTTCTTCTTCT 59.251 43.478 0.00 0.00 0.00 2.85
722 723 3.120165 GGGCACACGATTTCTTCTTCTTC 60.120 47.826 0.00 0.00 0.00 2.87
723 724 2.814336 GGGCACACGATTTCTTCTTCTT 59.186 45.455 0.00 0.00 0.00 2.52
724 725 2.039084 AGGGCACACGATTTCTTCTTCT 59.961 45.455 0.00 0.00 0.00 2.85
725 726 2.427506 AGGGCACACGATTTCTTCTTC 58.572 47.619 0.00 0.00 0.00 2.87
726 727 2.568623 AGGGCACACGATTTCTTCTT 57.431 45.000 0.00 0.00 0.00 2.52
727 728 2.832129 TCTAGGGCACACGATTTCTTCT 59.168 45.455 0.00 0.00 0.00 2.85
728 729 2.930682 GTCTAGGGCACACGATTTCTTC 59.069 50.000 0.00 0.00 0.00 2.87
729 730 2.674177 CGTCTAGGGCACACGATTTCTT 60.674 50.000 0.00 0.00 35.49 2.52
730 731 1.135083 CGTCTAGGGCACACGATTTCT 60.135 52.381 0.00 0.00 35.49 2.52
731 732 1.278238 CGTCTAGGGCACACGATTTC 58.722 55.000 0.00 0.00 35.49 2.17
732 733 0.606604 ACGTCTAGGGCACACGATTT 59.393 50.000 4.13 0.00 37.00 2.17
733 734 1.133790 GTACGTCTAGGGCACACGATT 59.866 52.381 4.13 0.00 37.00 3.34
734 735 0.737219 GTACGTCTAGGGCACACGAT 59.263 55.000 4.13 0.00 37.00 3.73
735 736 1.308069 GGTACGTCTAGGGCACACGA 61.308 60.000 4.13 0.00 37.00 4.35
736 737 1.138247 GGTACGTCTAGGGCACACG 59.862 63.158 0.00 0.00 39.48 4.49
737 738 0.455005 GAGGTACGTCTAGGGCACAC 59.545 60.000 8.31 0.00 0.00 3.82
738 739 0.038599 TGAGGTACGTCTAGGGCACA 59.961 55.000 16.00 0.00 0.00 4.57
739 740 0.455005 GTGAGGTACGTCTAGGGCAC 59.545 60.000 16.00 2.57 0.00 5.01
740 741 0.682209 GGTGAGGTACGTCTAGGGCA 60.682 60.000 16.00 0.00 0.00 5.36
741 742 1.390383 GGGTGAGGTACGTCTAGGGC 61.390 65.000 16.00 2.66 0.00 5.19
742 743 0.033796 TGGGTGAGGTACGTCTAGGG 60.034 60.000 16.00 0.00 0.00 3.53
743 744 1.101331 GTGGGTGAGGTACGTCTAGG 58.899 60.000 16.00 0.00 0.00 3.02
744 745 1.101331 GGTGGGTGAGGTACGTCTAG 58.899 60.000 16.00 0.00 0.00 2.43
745 746 0.323725 GGGTGGGTGAGGTACGTCTA 60.324 60.000 16.00 1.04 0.00 2.59
746 747 1.608627 GGGTGGGTGAGGTACGTCT 60.609 63.158 16.00 0.00 0.00 4.18
747 748 1.885163 CTGGGTGGGTGAGGTACGTC 61.885 65.000 8.63 8.63 0.00 4.34
748 749 1.911766 CTGGGTGGGTGAGGTACGT 60.912 63.158 0.00 0.00 0.00 3.57
749 750 1.605058 CTCTGGGTGGGTGAGGTACG 61.605 65.000 0.00 0.00 0.00 3.67
750 751 1.900545 GCTCTGGGTGGGTGAGGTAC 61.901 65.000 0.00 0.00 0.00 3.34
751 752 1.612442 GCTCTGGGTGGGTGAGGTA 60.612 63.158 0.00 0.00 0.00 3.08
752 753 2.930562 GCTCTGGGTGGGTGAGGT 60.931 66.667 0.00 0.00 0.00 3.85
753 754 3.721706 GGCTCTGGGTGGGTGAGG 61.722 72.222 0.00 0.00 0.00 3.86
754 755 1.856539 ATTGGCTCTGGGTGGGTGAG 61.857 60.000 0.00 0.00 0.00 3.51
755 756 1.852157 ATTGGCTCTGGGTGGGTGA 60.852 57.895 0.00 0.00 0.00 4.02
756 757 1.379044 GATTGGCTCTGGGTGGGTG 60.379 63.158 0.00 0.00 0.00 4.61
757 758 1.542375 AGATTGGCTCTGGGTGGGT 60.542 57.895 0.00 0.00 31.12 4.51
758 759 1.225704 GAGATTGGCTCTGGGTGGG 59.774 63.158 0.00 0.00 40.61 4.61
759 760 1.153289 CGAGATTGGCTCTGGGTGG 60.153 63.158 0.00 0.00 41.66 4.61
760 761 1.817099 GCGAGATTGGCTCTGGGTG 60.817 63.158 0.00 0.00 41.66 4.61
761 762 2.586792 GCGAGATTGGCTCTGGGT 59.413 61.111 0.00 0.00 41.66 4.51
762 763 2.203126 GGCGAGATTGGCTCTGGG 60.203 66.667 0.00 0.00 41.66 4.45
763 764 2.906458 AGGCGAGATTGGCTCTGG 59.094 61.111 0.00 0.00 41.54 3.86
768 769 3.468326 GAGGGGAGGCGAGATTGGC 62.468 68.421 0.00 0.00 0.00 4.52
769 770 2.812619 GGAGGGGAGGCGAGATTGG 61.813 68.421 0.00 0.00 0.00 3.16
770 771 2.812619 GGGAGGGGAGGCGAGATTG 61.813 68.421 0.00 0.00 0.00 2.67
771 772 2.446802 GGGAGGGGAGGCGAGATT 60.447 66.667 0.00 0.00 0.00 2.40
772 773 4.565850 GGGGAGGGGAGGCGAGAT 62.566 72.222 0.00 0.00 0.00 2.75
779 780 4.179599 GAGGGGAGGGGAGGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
2028 2111 3.918220 CCGCAGCGCTCATCGAAC 61.918 66.667 20.47 0.17 41.67 3.95
2047 2130 1.722011 ATGTCGTCAACCACCGAATC 58.278 50.000 0.00 0.00 34.47 2.52
2053 2136 3.188460 ACAGCAAATATGTCGTCAACCAC 59.812 43.478 0.00 0.00 0.00 4.16
2234 2362 0.109597 CTTGATCAAGTTGGTGCCGC 60.110 55.000 24.65 0.00 33.87 6.53
2418 3202 2.083774 TGATTGCTAACTGGGAAAGCG 58.916 47.619 0.00 0.00 39.14 4.68
2526 3310 2.288666 GTCTGAACCAGTTGCTCAACA 58.711 47.619 14.32 0.00 43.47 3.33
2567 3351 6.650372 CACTTTAAGAGTAGCAAACAGACAC 58.350 40.000 0.00 0.00 36.65 3.67
2792 3576 1.139816 TCTTGCTCTATTGCGTCGCG 61.140 55.000 13.38 0.00 35.36 5.87
2797 3581 2.096496 CCCTTGTTCTTGCTCTATTGCG 59.904 50.000 0.00 0.00 35.36 4.85
3142 4008 8.655970 GCATAGAAGTGTTGTTTTTCTTGTTTT 58.344 29.630 0.00 0.00 33.51 2.43
3150 4016 9.762933 ACATATTTGCATAGAAGTGTTGTTTTT 57.237 25.926 0.00 0.00 0.00 1.94
3232 4098 2.125350 GGAAGCCCTGTCTGCGAG 60.125 66.667 0.00 0.00 0.00 5.03
3244 4110 1.540580 GCATCGTAGGGGTAAGGAAGC 60.541 57.143 0.00 0.00 0.00 3.86
3256 4122 1.811217 CGTCGTGGCATGCATCGTAG 61.811 60.000 21.36 15.69 0.00 3.51
3279 4145 7.073342 ACACAAGCCGAGAAAATAATAGTTC 57.927 36.000 0.00 0.00 0.00 3.01
3280 4146 7.040686 ACAACACAAGCCGAGAAAATAATAGTT 60.041 33.333 0.00 0.00 0.00 2.24
3344 4210 1.229984 CAGAAGAACCCCCTCCCCT 60.230 63.158 0.00 0.00 0.00 4.79
3347 4213 0.547954 AGGACAGAAGAACCCCCTCC 60.548 60.000 0.00 0.00 0.00 4.30
3349 4215 0.842467 CCAGGACAGAAGAACCCCCT 60.842 60.000 0.00 0.00 0.00 4.79
3360 4226 1.228367 AGCAAGCAACCCAGGACAG 60.228 57.895 0.00 0.00 0.00 3.51
3364 4230 0.032540 GAAACAGCAAGCAACCCAGG 59.967 55.000 0.00 0.00 0.00 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.