Multiple sequence alignment - TraesCS3B01G345000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G345000 chr3B 100.000 5971 0 0 1 5971 554702640 554696670 0.000000e+00 11027.0
1 TraesCS3B01G345000 chr3B 94.792 96 5 0 2804 2899 551513885 551513980 3.730000e-32 150.0
2 TraesCS3B01G345000 chr3B 92.391 92 7 0 2804 2895 69673096 69673005 1.350000e-26 132.0
3 TraesCS3B01G345000 chr3D 94.120 2313 110 16 3191 5489 424659194 424656894 0.000000e+00 3494.0
4 TraesCS3B01G345000 chr3D 93.849 2146 76 27 1083 3202 424661377 424659262 0.000000e+00 3181.0
5 TraesCS3B01G345000 chr3D 90.996 522 30 10 531 1049 424662183 424661676 0.000000e+00 688.0
6 TraesCS3B01G345000 chr3D 86.989 538 66 3 1 536 424665748 424665213 2.380000e-168 603.0
7 TraesCS3B01G345000 chr3A 94.796 2210 96 11 3191 5390 564342939 564345139 0.000000e+00 3426.0
8 TraesCS3B01G345000 chr3A 91.807 2490 127 37 745 3193 564340409 564342862 0.000000e+00 3397.0
9 TraesCS3B01G345000 chr3A 91.608 858 61 8 1 855 564339560 564340409 0.000000e+00 1175.0
10 TraesCS3B01G345000 chr6D 94.612 1058 52 5 3191 4248 469510762 469509710 0.000000e+00 1633.0
11 TraesCS3B01G345000 chr6D 94.429 1059 52 7 3191 4248 469491954 469490902 0.000000e+00 1622.0
12 TraesCS3B01G345000 chr6D 89.308 1272 68 19 1963 3202 469512065 469510830 0.000000e+00 1533.0
13 TraesCS3B01G345000 chr6D 90.060 1006 47 14 2214 3202 469492991 469492022 0.000000e+00 1254.0
14 TraesCS3B01G345000 chr6D 88.510 557 34 6 4929 5480 457065388 457064857 0.000000e+00 647.0
15 TraesCS3B01G345000 chr6D 87.719 513 28 12 4232 4712 469489324 469488815 3.120000e-157 566.0
16 TraesCS3B01G345000 chr6D 87.329 513 30 12 4232 4712 469508134 469507625 6.760000e-154 555.0
17 TraesCS3B01G345000 chr6D 88.235 323 21 7 1306 1611 469512662 469512340 2.630000e-98 370.0
18 TraesCS3B01G345000 chr6D 87.546 273 22 11 4540 4807 457068347 457068082 7.520000e-79 305.0
19 TraesCS3B01G345000 chr6D 78.528 489 41 16 705 1181 469521982 469521546 4.590000e-66 263.0
20 TraesCS3B01G345000 chr6D 91.724 145 11 1 4803 4946 457065611 457065467 3.650000e-47 200.0
21 TraesCS3B01G345000 chr6D 80.556 252 10 14 1700 1932 469512296 469512065 2.230000e-34 158.0
22 TraesCS3B01G345000 chr6D 97.297 37 1 0 2187 2223 469511752 469511716 5.000000e-06 63.9
23 TraesCS3B01G345000 chr6D 94.595 37 2 0 2187 2223 469492944 469492908 2.320000e-04 58.4
24 TraesCS3B01G345000 chr4B 92.814 501 30 6 5475 5971 568451386 568451884 0.000000e+00 721.0
25 TraesCS3B01G345000 chr7B 92.786 499 31 5 5476 5971 107755538 107755042 0.000000e+00 717.0
26 TraesCS3B01G345000 chr7B 92.786 499 31 5 5476 5971 638094122 638094618 0.000000e+00 717.0
27 TraesCS3B01G345000 chr7B 91.400 500 37 6 5475 5971 566753838 566753342 0.000000e+00 680.0
28 TraesCS3B01G345000 chr7B 91.820 489 37 3 5484 5971 143247524 143247038 0.000000e+00 678.0
29 TraesCS3B01G345000 chr2B 92.000 500 34 6 5475 5971 42970686 42970190 0.000000e+00 697.0
30 TraesCS3B01G345000 chr2B 98.889 90 1 0 2803 2892 69007335 69007246 1.720000e-35 161.0
31 TraesCS3B01G345000 chr2B 100.000 86 0 0 2807 2892 779319970 779319885 6.190000e-35 159.0
32 TraesCS3B01G345000 chr6B 91.968 498 35 5 5477 5971 151682599 151683094 0.000000e+00 693.0
33 TraesCS3B01G345000 chr5B 91.583 499 36 5 5476 5971 702647236 702647731 0.000000e+00 684.0
34 TraesCS3B01G345000 chr5B 91.400 500 36 6 5475 5971 677713840 677713345 0.000000e+00 678.0
35 TraesCS3B01G345000 chr5D 87.179 624 44 17 4544 5162 547260245 547260837 0.000000e+00 676.0
36 TraesCS3B01G345000 chr5D 92.488 426 18 6 3400 3824 547259835 547260247 1.110000e-166 597.0
37 TraesCS3B01G345000 chrUn 91.436 397 18 4 2293 2682 480365457 480365844 1.140000e-146 531.0
38 TraesCS3B01G345000 chr7A 94.681 94 5 0 2799 2892 581851000 581850907 4.820000e-31 147.0
39 TraesCS3B01G345000 chr2A 95.604 91 4 0 2804 2894 65084813 65084903 4.820000e-31 147.0
40 TraesCS3B01G345000 chr2A 95.506 89 4 0 2807 2895 539325662 539325574 6.240000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G345000 chr3B 554696670 554702640 5970 True 11027.000000 11027 100.000000 1 5971 1 chr3B.!!$R2 5970
1 TraesCS3B01G345000 chr3D 424656894 424665748 8854 True 1991.500000 3494 91.488500 1 5489 4 chr3D.!!$R1 5488
2 TraesCS3B01G345000 chr3A 564339560 564345139 5579 False 2666.000000 3426 92.737000 1 5390 3 chr3A.!!$F1 5389
3 TraesCS3B01G345000 chr6D 469488815 469492991 4176 True 875.100000 1622 91.700750 2187 4712 4 chr6D.!!$R3 2525
4 TraesCS3B01G345000 chr6D 469507625 469512662 5037 True 718.816667 1633 89.556167 1306 4712 6 chr6D.!!$R4 3406
5 TraesCS3B01G345000 chr6D 457064857 457068347 3490 True 384.000000 647 89.260000 4540 5480 3 chr6D.!!$R2 940
6 TraesCS3B01G345000 chr5D 547259835 547260837 1002 False 636.500000 676 89.833500 3400 5162 2 chr5D.!!$F1 1762

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
190 193 0.746659 GGTTGAGGCATACCATTGGC 59.253 55.000 1.54 0.0 42.18 4.52 F
1141 4560 1.133869 GTTCGCGAATCCGTTTGGG 59.866 57.895 26.23 0.0 38.24 4.12 F
1187 4606 0.678048 GGGGCGCTCTTGTGATTTCT 60.678 55.000 7.48 0.0 0.00 2.52 F
1280 4700 0.830444 TCCGTGTACTGGACTGCCTT 60.830 55.000 3.61 0.0 34.31 4.35 F
3157 6682 0.527565 GCACTTCATTTGGCGGATGT 59.472 50.000 0.72 0.0 0.00 3.06 F
3795 7399 1.575576 CTGGCAGCACAGAAGCACTC 61.576 60.000 0.00 0.0 40.97 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1166 4585 0.323725 AAATCACAAGAGCGCCCCAT 60.324 50.000 2.29 0.0 0.00 4.00 R
2479 5981 1.873698 TCTGCCTCAACAACGGTAAC 58.126 50.000 0.00 0.0 0.00 2.50 R
2875 6390 3.949842 ACAAGTACTCCCTCCGTAAAC 57.050 47.619 0.00 0.0 0.00 2.01 R
3264 6868 2.119495 GAATTACCCTCAGGCCTCAGA 58.881 52.381 4.61 0.0 36.11 3.27 R
4227 7831 0.107654 AAATCTAGCAGCACCCGGTC 60.108 55.000 0.00 0.0 0.00 4.79 R
5639 13459 0.095935 CGCCAGATCAAAACTCGCAG 59.904 55.000 0.00 0.0 0.00 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.185188 GGACATGAGCAACTATATGTGCG 59.815 47.826 0.00 0.00 34.18 5.34
30 31 3.205338 TGAGCAACTATATGTGCGCATT 58.795 40.909 19.46 7.28 36.58 3.56
37 38 4.956085 ACTATATGTGCGCATTTGTCCTA 58.044 39.130 19.46 0.00 36.58 2.94
53 54 3.008594 TGTCCTATTTCGCCTTTTCTCCA 59.991 43.478 0.00 0.00 0.00 3.86
76 77 7.890127 TCCATTTTCTTCACTTCCATAGTTGAT 59.110 33.333 0.00 0.00 33.85 2.57
84 85 6.475504 TCACTTCCATAGTTGATGAATGTGT 58.524 36.000 0.00 0.00 37.82 3.72
162 165 5.061064 GCATCCGAATCTAACTTGCTATACG 59.939 44.000 0.00 0.00 0.00 3.06
190 193 0.746659 GGTTGAGGCATACCATTGGC 59.253 55.000 1.54 0.00 42.18 4.52
231 234 4.947388 GGTATGGTTCTTTGTGCATAGGAA 59.053 41.667 0.00 0.00 0.00 3.36
265 268 1.673337 AAAGCGGGCCGTAAAGTCC 60.673 57.895 28.82 8.71 0.00 3.85
280 284 6.146898 CGTAAAGTCCGGTTTTCATTTGAAT 58.853 36.000 0.00 0.00 33.54 2.57
294 298 9.624373 TTTTCATTTGAATTTGGGATCAAAGAA 57.376 25.926 7.00 7.60 45.61 2.52
295 299 9.624373 TTTCATTTGAATTTGGGATCAAAGAAA 57.376 25.926 14.52 14.52 45.61 2.52
382 386 2.091541 GCCATCGAAAGGGACATTCAA 58.908 47.619 9.07 0.00 35.58 2.69
435 439 3.350219 AACGGGTATGCTCAATGACTT 57.650 42.857 0.00 0.00 0.00 3.01
524 528 7.416664 GCAAGAATTTTAGATTAGATGGGTGCA 60.417 37.037 0.00 0.00 0.00 4.57
529 533 3.550437 AGATTAGATGGGTGCAGTGTC 57.450 47.619 0.00 0.00 0.00 3.67
610 3649 3.953542 AAAGTCTGGTTTTGAGTCCCT 57.046 42.857 0.00 0.00 0.00 4.20
611 3650 3.493767 AAGTCTGGTTTTGAGTCCCTC 57.506 47.619 0.00 0.00 0.00 4.30
612 3651 1.344763 AGTCTGGTTTTGAGTCCCTCG 59.655 52.381 0.00 0.00 32.35 4.63
643 3682 6.671614 TTTTAAGCATTGTATCGTCGGAAT 57.328 33.333 0.00 0.00 0.00 3.01
1121 4540 2.488153 GGTTCTGGTGTTGGCTATTGTC 59.512 50.000 0.00 0.00 0.00 3.18
1141 4560 1.133869 GTTCGCGAATCCGTTTGGG 59.866 57.895 26.23 0.00 38.24 4.12
1142 4561 2.036006 TTCGCGAATCCGTTTGGGG 61.036 57.895 19.38 0.00 38.24 4.96
1144 4563 2.874751 GCGAATCCGTTTGGGGTG 59.125 61.111 0.00 0.00 38.24 4.61
1166 4585 1.602888 GATAGGGCGGCGAGGTAGA 60.603 63.158 12.98 0.00 0.00 2.59
1172 4591 4.301027 CGGCGAGGTAGATGGGGC 62.301 72.222 0.00 0.00 0.00 5.80
1187 4606 0.678048 GGGGCGCTCTTGTGATTTCT 60.678 55.000 7.48 0.00 0.00 2.52
1280 4700 0.830444 TCCGTGTACTGGACTGCCTT 60.830 55.000 3.61 0.00 34.31 4.35
1356 4778 2.039879 GGGATGAGGTTGTTGTGGTAGT 59.960 50.000 0.00 0.00 0.00 2.73
1380 4802 6.660887 AAAGAAGAGAGATCGATTCTTTGC 57.339 37.500 17.13 8.79 45.48 3.68
1467 4897 4.962155 AGAAGAGATTGGAACTTTGTCGT 58.038 39.130 0.00 0.00 0.00 4.34
1539 4974 1.302832 CCGCACAGGGAGCTTTCTT 60.303 57.895 0.00 0.00 35.97 2.52
1608 5043 7.308529 CCAGTTTAGCATTCAACAACATGAGTA 60.309 37.037 0.00 0.00 0.00 2.59
1686 5149 6.437477 TCAATGGAGACTTTAGAGTGCTCTAA 59.563 38.462 15.39 15.39 46.88 2.10
1826 5289 2.818751 ATTCTGGCGAAACCCCAATA 57.181 45.000 0.00 0.00 37.83 1.90
1920 5402 2.127232 GCTATTGGTTGCCGGCCAT 61.127 57.895 26.77 10.55 35.71 4.40
2145 5642 3.652387 TGCCTGCATCTCAATAGGGAATA 59.348 43.478 0.00 0.00 0.00 1.75
2164 5661 7.181845 AGGGAATAGTTCTGTGAAAGAATCTCT 59.818 37.037 0.00 0.00 46.53 3.10
2469 5971 2.287547 GCGTTGCCAAATTCACTCAAGA 60.288 45.455 0.00 0.00 0.00 3.02
2479 5981 7.116805 GCCAAATTCACTCAAGAAAATAACCTG 59.883 37.037 0.00 0.00 0.00 4.00
2520 6022 6.486657 CAGATGACTAGAGTTCTTCTCCCTAG 59.513 46.154 0.00 0.00 43.71 3.02
2822 6328 5.018809 TGTGTATTACTCCCTCCGTAAAGT 58.981 41.667 0.00 0.00 31.36 2.66
2846 6352 9.900710 AGTAATATAAGAGCGTTTAGATCACTG 57.099 33.333 0.00 0.00 37.82 3.66
2897 6412 4.101430 TGTTTACGGAGGGAGTACTTGTTT 59.899 41.667 0.00 0.00 0.00 2.83
2968 6483 8.603304 AGTTCTAGTGTACATTAACTTTCCCAT 58.397 33.333 0.00 0.00 0.00 4.00
3043 6564 6.487828 AGATGATGAAGGAAGTCCATTTTCA 58.512 36.000 0.00 1.82 38.89 2.69
3157 6682 0.527565 GCACTTCATTTGGCGGATGT 59.472 50.000 0.72 0.00 0.00 3.06
3169 6694 3.402110 TGGCGGATGTGATATCAACATC 58.598 45.455 24.93 24.93 39.43 3.06
3234 6838 9.425248 ACCTATTGATTTGATTTACCATGTCAT 57.575 29.630 0.00 0.00 0.00 3.06
3235 6839 9.687210 CCTATTGATTTGATTTACCATGTCATG 57.313 33.333 5.79 5.79 0.00 3.07
3264 6868 8.935741 AGGCTGCTTAGTTATACCTAAGTAAAT 58.064 33.333 15.95 1.50 43.77 1.40
3354 6958 7.324354 AGTTTCTTTTTAACGGTAGCTTTCA 57.676 32.000 0.00 0.00 0.00 2.69
3375 6979 3.312736 TTTGCTCCCTTTGTTCTTCCT 57.687 42.857 0.00 0.00 0.00 3.36
3512 7116 3.289836 CCATTTGTCTACATGCATGGGA 58.710 45.455 29.41 22.53 30.53 4.37
3527 7131 6.275494 TGCATGGGATATTTGCATCTTATG 57.725 37.500 0.00 0.00 41.18 1.90
3559 7163 3.196469 TGTGTTGGGATTTTGTTTCAGCA 59.804 39.130 0.00 0.00 0.00 4.41
3622 7226 2.435805 AGAACTGACAGAAGAGTTGGCA 59.564 45.455 10.08 0.00 32.47 4.92
3728 7332 5.244178 TGGTAACTGGCCGAATTTATTTTGT 59.756 36.000 0.00 0.00 37.61 2.83
3729 7333 5.575218 GGTAACTGGCCGAATTTATTTTGTG 59.425 40.000 0.00 0.00 0.00 3.33
3741 7345 7.819900 CGAATTTATTTTGTGGGTGGGAAATTA 59.180 33.333 0.00 0.00 0.00 1.40
3795 7399 1.575576 CTGGCAGCACAGAAGCACTC 61.576 60.000 0.00 0.00 40.97 3.51
4036 7640 5.269189 TCCTGTGTTGTAGTCATCTGGATA 58.731 41.667 0.00 0.00 0.00 2.59
4227 7831 2.847327 AGCCCATTATCATCACCGAG 57.153 50.000 0.00 0.00 0.00 4.63
4248 7852 1.017387 CCGGGTGCTGCTAGATTTTC 58.983 55.000 0.00 0.00 0.00 2.29
4255 9455 3.000724 GTGCTGCTAGATTTTCTACGCAG 59.999 47.826 20.03 20.03 44.54 5.18
4332 9532 9.098355 GTAACTTCTTTAGCATGTCACATATGA 57.902 33.333 10.38 0.00 0.00 2.15
4348 9548 9.643693 GTCACATATGAGGATGTTTTGATTTTT 57.356 29.630 10.38 0.00 37.99 1.94
4382 9583 7.618117 TGAGTAACTATGGAGATCCTTGTGTTA 59.382 37.037 0.00 5.96 36.82 2.41
4483 9685 3.641434 AGGCAGAATGTTGCAGATAGT 57.359 42.857 4.34 0.00 45.86 2.12
4586 9816 3.374988 TGATGTTTGTCTGGCGATCAATC 59.625 43.478 0.00 0.00 0.00 2.67
4652 9882 2.137425 TACAGCAGTCGACCGTGGTG 62.137 60.000 26.20 26.20 45.62 4.17
4687 9917 4.286032 ACAGCAGGAAGTTGACAAGGTATA 59.714 41.667 0.00 0.00 32.13 1.47
4729 9959 9.918630 AATCCTGTCTTTGTTTTTCTCATTATG 57.081 29.630 0.00 0.00 0.00 1.90
4750 9980 5.027293 TGAGTCATGATTCTGTATGGGTG 57.973 43.478 17.91 0.00 0.00 4.61
4780 10010 5.649831 CAGCCCATTTACTCTTTTTCTAGCT 59.350 40.000 0.00 0.00 0.00 3.32
4885 12597 5.408299 TGAGATTTCACTATTGGTGTTGTCG 59.592 40.000 0.00 0.00 45.50 4.35
5060 12871 4.348656 GAAACAACACCGAGAGTTTTTCC 58.651 43.478 0.00 0.00 34.62 3.13
5112 12923 0.173481 TATCTGCAGCGACCTGACAC 59.827 55.000 9.47 0.00 41.77 3.67
5187 13004 0.248949 GGGTCGTCGGTATTCTGCTC 60.249 60.000 0.00 0.00 0.00 4.26
5191 13008 1.392710 CGTCGGTATTCTGCTCCCCT 61.393 60.000 0.00 0.00 0.00 4.79
5317 13137 1.064463 TGTCCATCCCTTCAGCATTCC 60.064 52.381 0.00 0.00 0.00 3.01
5322 13142 1.067295 TCCCTTCAGCATTCCAGTGT 58.933 50.000 0.00 0.00 0.00 3.55
5349 13169 6.038356 CGAGAAAAAGAAAGGCGGTAGTATA 58.962 40.000 0.00 0.00 0.00 1.47
5350 13170 6.700520 CGAGAAAAAGAAAGGCGGTAGTATAT 59.299 38.462 0.00 0.00 0.00 0.86
5399 13219 3.371102 TCGAGAATCCAGATAAAGCGG 57.629 47.619 0.00 0.00 0.00 5.52
5402 13222 1.139058 AGAATCCAGATAAAGCGGCGT 59.861 47.619 9.37 0.00 0.00 5.68
5403 13223 1.940613 GAATCCAGATAAAGCGGCGTT 59.059 47.619 9.37 6.38 0.00 4.84
5422 13242 4.801516 GCGTTTGCTTCTTTAGTTTTCCAA 59.198 37.500 0.00 0.00 38.39 3.53
5423 13243 5.289917 GCGTTTGCTTCTTTAGTTTTCCAAA 59.710 36.000 0.00 0.00 38.39 3.28
5424 13244 6.183360 GCGTTTGCTTCTTTAGTTTTCCAAAA 60.183 34.615 0.00 0.00 38.39 2.44
5426 13246 8.055986 CGTTTGCTTCTTTAGTTTTCCAAAATC 58.944 33.333 0.00 0.00 0.00 2.17
5427 13247 7.692908 TTGCTTCTTTAGTTTTCCAAAATCG 57.307 32.000 0.00 0.00 0.00 3.34
5428 13248 6.801575 TGCTTCTTTAGTTTTCCAAAATCGT 58.198 32.000 0.00 0.00 0.00 3.73
5429 13249 6.695278 TGCTTCTTTAGTTTTCCAAAATCGTG 59.305 34.615 0.00 0.00 0.00 4.35
5431 13251 7.858879 GCTTCTTTAGTTTTCCAAAATCGTGTA 59.141 33.333 0.00 0.00 0.00 2.90
5432 13252 9.166126 CTTCTTTAGTTTTCCAAAATCGTGTAC 57.834 33.333 0.00 0.00 0.00 2.90
5433 13253 8.441312 TCTTTAGTTTTCCAAAATCGTGTACT 57.559 30.769 0.00 0.00 0.00 2.73
5434 13254 9.545105 TCTTTAGTTTTCCAAAATCGTGTACTA 57.455 29.630 0.00 0.00 0.00 1.82
5453 13273 2.717639 ACAGGAATTATGCGAAGGCT 57.282 45.000 0.00 0.00 40.82 4.58
5454 13274 2.292267 ACAGGAATTATGCGAAGGCTG 58.708 47.619 0.00 0.00 40.82 4.85
5466 13286 1.135083 CGAAGGCTGGATCGTGTTAGT 60.135 52.381 0.00 0.00 34.48 2.24
5473 13293 1.084289 GGATCGTGTTAGTGGTTGGC 58.916 55.000 0.00 0.00 0.00 4.52
5476 13296 1.588674 TCGTGTTAGTGGTTGGCAAG 58.411 50.000 0.00 0.00 0.00 4.01
5480 13300 1.133945 TGTTAGTGGTTGGCAAGAGCA 60.134 47.619 0.00 0.00 44.61 4.26
5481 13301 2.162681 GTTAGTGGTTGGCAAGAGCAT 58.837 47.619 0.00 0.00 44.61 3.79
5482 13302 2.113860 TAGTGGTTGGCAAGAGCATC 57.886 50.000 0.00 0.00 44.61 3.91
5496 13316 2.767536 GCATCTAGCAAACCTCGCA 58.232 52.632 0.00 0.00 44.79 5.10
5497 13317 1.303309 GCATCTAGCAAACCTCGCAT 58.697 50.000 0.00 0.00 44.79 4.73
5498 13318 1.262683 GCATCTAGCAAACCTCGCATC 59.737 52.381 0.00 0.00 44.79 3.91
5499 13319 1.869767 CATCTAGCAAACCTCGCATCC 59.130 52.381 0.00 0.00 0.00 3.51
5500 13320 0.178068 TCTAGCAAACCTCGCATCCC 59.822 55.000 0.00 0.00 0.00 3.85
5501 13321 1.153449 TAGCAAACCTCGCATCCCG 60.153 57.895 0.00 0.00 38.61 5.14
5502 13322 1.895020 TAGCAAACCTCGCATCCCGT 61.895 55.000 0.00 0.00 38.35 5.28
5503 13323 2.750888 GCAAACCTCGCATCCCGTC 61.751 63.158 0.00 0.00 38.35 4.79
5504 13324 2.125673 AAACCTCGCATCCCGTCG 60.126 61.111 0.00 0.00 38.35 5.12
5505 13325 2.642254 AAACCTCGCATCCCGTCGA 61.642 57.895 0.00 0.00 38.35 4.20
5506 13326 2.830704 AAACCTCGCATCCCGTCGAC 62.831 60.000 5.18 5.18 38.35 4.20
5507 13327 4.570663 CCTCGCATCCCGTCGACC 62.571 72.222 10.58 0.00 38.35 4.79
5508 13328 4.570663 CTCGCATCCCGTCGACCC 62.571 72.222 10.58 0.00 38.35 4.46
5512 13332 4.221422 CATCCCGTCGACCCGCAT 62.221 66.667 10.58 0.00 0.00 4.73
5513 13333 2.520020 ATCCCGTCGACCCGCATA 60.520 61.111 10.58 0.00 0.00 3.14
5514 13334 2.129146 ATCCCGTCGACCCGCATAA 61.129 57.895 10.58 0.00 0.00 1.90
5515 13335 2.359570 ATCCCGTCGACCCGCATAAC 62.360 60.000 10.58 0.00 0.00 1.89
5516 13336 2.493030 CCGTCGACCCGCATAACT 59.507 61.111 10.58 0.00 0.00 2.24
5517 13337 1.588139 CCGTCGACCCGCATAACTC 60.588 63.158 10.58 0.00 0.00 3.01
5518 13338 1.138036 CGTCGACCCGCATAACTCA 59.862 57.895 10.58 0.00 0.00 3.41
5519 13339 0.248907 CGTCGACCCGCATAACTCAT 60.249 55.000 10.58 0.00 0.00 2.90
5520 13340 1.801395 CGTCGACCCGCATAACTCATT 60.801 52.381 10.58 0.00 0.00 2.57
5521 13341 2.277084 GTCGACCCGCATAACTCATTT 58.723 47.619 3.51 0.00 0.00 2.32
5522 13342 2.030457 GTCGACCCGCATAACTCATTTG 59.970 50.000 3.51 0.00 0.00 2.32
5523 13343 1.268032 CGACCCGCATAACTCATTTGC 60.268 52.381 0.00 0.00 0.00 3.68
5524 13344 1.742831 GACCCGCATAACTCATTTGCA 59.257 47.619 0.00 0.00 36.15 4.08
5525 13345 1.745087 ACCCGCATAACTCATTTGCAG 59.255 47.619 0.00 0.00 36.15 4.41
5526 13346 1.745087 CCCGCATAACTCATTTGCAGT 59.255 47.619 0.00 0.00 36.15 4.40
5527 13347 2.164219 CCCGCATAACTCATTTGCAGTT 59.836 45.455 0.00 0.00 37.80 3.16
5528 13348 3.429085 CCGCATAACTCATTTGCAGTTC 58.571 45.455 0.00 0.00 35.63 3.01
5529 13349 3.119884 CCGCATAACTCATTTGCAGTTCA 60.120 43.478 0.00 0.00 35.63 3.18
5530 13350 3.848019 CGCATAACTCATTTGCAGTTCAC 59.152 43.478 0.00 0.00 35.63 3.18
5531 13351 3.848019 GCATAACTCATTTGCAGTTCACG 59.152 43.478 0.00 0.00 35.63 4.35
5532 13352 4.613622 GCATAACTCATTTGCAGTTCACGT 60.614 41.667 0.00 0.00 35.63 4.49
5533 13353 5.390461 GCATAACTCATTTGCAGTTCACGTA 60.390 40.000 0.00 0.00 35.63 3.57
5534 13354 6.598525 CATAACTCATTTGCAGTTCACGTAA 58.401 36.000 0.00 0.00 35.63 3.18
5535 13355 5.493133 AACTCATTTGCAGTTCACGTAAA 57.507 34.783 0.00 0.00 27.00 2.01
5536 13356 5.493133 ACTCATTTGCAGTTCACGTAAAA 57.507 34.783 0.00 0.00 0.00 1.52
5537 13357 5.270853 ACTCATTTGCAGTTCACGTAAAAC 58.729 37.500 5.14 5.14 0.00 2.43
5538 13358 4.602995 TCATTTGCAGTTCACGTAAAACC 58.397 39.130 8.84 0.00 0.00 3.27
5539 13359 4.096532 TCATTTGCAGTTCACGTAAAACCA 59.903 37.500 8.84 0.34 0.00 3.67
5540 13360 3.408288 TTGCAGTTCACGTAAAACCAC 57.592 42.857 8.84 3.63 0.00 4.16
5541 13361 2.634600 TGCAGTTCACGTAAAACCACT 58.365 42.857 8.84 0.00 0.00 4.00
5542 13362 3.011119 TGCAGTTCACGTAAAACCACTT 58.989 40.909 8.84 0.00 0.00 3.16
5543 13363 3.440872 TGCAGTTCACGTAAAACCACTTT 59.559 39.130 8.84 0.00 0.00 2.66
5544 13364 4.082679 TGCAGTTCACGTAAAACCACTTTT 60.083 37.500 8.84 0.00 33.92 2.27
5545 13365 4.264380 GCAGTTCACGTAAAACCACTTTTG 59.736 41.667 8.84 2.68 31.74 2.44
5546 13366 5.395642 CAGTTCACGTAAAACCACTTTTGT 58.604 37.500 8.84 0.00 31.74 2.83
5555 13375 2.637025 CACTTTTGTGGGCCGACG 59.363 61.111 13.67 1.07 46.16 5.12
5556 13376 3.284449 ACTTTTGTGGGCCGACGC 61.284 61.111 13.67 0.00 0.00 5.19
5557 13377 4.383602 CTTTTGTGGGCCGACGCG 62.384 66.667 13.67 3.53 35.02 6.01
5581 13401 2.821366 CACAGATGCAGACCCCGC 60.821 66.667 0.00 0.00 0.00 6.13
5582 13402 3.321648 ACAGATGCAGACCCCGCA 61.322 61.111 0.00 0.00 44.94 5.69
5587 13407 4.557554 TGCAGACCCCGCATAATG 57.442 55.556 0.00 0.00 33.55 1.90
5588 13408 1.152984 TGCAGACCCCGCATAATGG 60.153 57.895 0.00 0.00 33.55 3.16
5589 13409 1.148273 GCAGACCCCGCATAATGGA 59.852 57.895 0.00 0.00 0.00 3.41
5590 13410 0.250901 GCAGACCCCGCATAATGGAT 60.251 55.000 0.00 0.00 0.00 3.41
5591 13411 1.813513 CAGACCCCGCATAATGGATC 58.186 55.000 0.00 0.00 0.00 3.36
5592 13412 0.693049 AGACCCCGCATAATGGATCC 59.307 55.000 4.20 4.20 0.00 3.36
5593 13413 0.673644 GACCCCGCATAATGGATCCG 60.674 60.000 7.39 0.00 0.00 4.18
5594 13414 1.374947 CCCCGCATAATGGATCCGT 59.625 57.895 7.39 3.27 0.00 4.69
5595 13415 0.611200 CCCCGCATAATGGATCCGTA 59.389 55.000 6.97 1.79 0.00 4.02
5596 13416 1.002659 CCCCGCATAATGGATCCGTAA 59.997 52.381 6.97 0.00 0.00 3.18
5597 13417 2.551287 CCCCGCATAATGGATCCGTAAA 60.551 50.000 6.97 0.00 0.00 2.01
5598 13418 3.142951 CCCGCATAATGGATCCGTAAAA 58.857 45.455 6.97 0.00 0.00 1.52
5599 13419 3.566322 CCCGCATAATGGATCCGTAAAAA 59.434 43.478 6.97 0.00 0.00 1.94
5641 13461 1.515081 TTTTTACGGGTCGGCTTCTG 58.485 50.000 0.00 0.00 0.00 3.02
5642 13462 0.952010 TTTTACGGGTCGGCTTCTGC 60.952 55.000 0.00 0.00 38.76 4.26
5643 13463 3.636313 TTACGGGTCGGCTTCTGCG 62.636 63.158 0.00 0.00 40.82 5.18
5646 13466 4.070552 GGGTCGGCTTCTGCGAGT 62.071 66.667 0.00 0.00 40.82 4.18
5647 13467 2.048127 GGTCGGCTTCTGCGAGTT 60.048 61.111 0.00 0.00 40.82 3.01
5648 13468 1.668151 GGTCGGCTTCTGCGAGTTT 60.668 57.895 0.00 0.00 40.82 2.66
5649 13469 1.228657 GGTCGGCTTCTGCGAGTTTT 61.229 55.000 0.00 0.00 40.82 2.43
5650 13470 0.110644 GTCGGCTTCTGCGAGTTTTG 60.111 55.000 0.00 0.00 40.82 2.44
5651 13471 0.249699 TCGGCTTCTGCGAGTTTTGA 60.250 50.000 0.00 0.00 40.82 2.69
5652 13472 0.798776 CGGCTTCTGCGAGTTTTGAT 59.201 50.000 0.00 0.00 40.82 2.57
5653 13473 1.201965 CGGCTTCTGCGAGTTTTGATC 60.202 52.381 0.00 0.00 40.82 2.92
5654 13474 2.079925 GGCTTCTGCGAGTTTTGATCT 58.920 47.619 0.00 0.00 40.82 2.75
5655 13475 2.159599 GGCTTCTGCGAGTTTTGATCTG 60.160 50.000 0.00 0.00 40.82 2.90
5656 13476 2.159599 GCTTCTGCGAGTTTTGATCTGG 60.160 50.000 0.00 0.00 0.00 3.86
5657 13477 1.442769 TCTGCGAGTTTTGATCTGGC 58.557 50.000 0.00 0.00 37.21 4.85
5658 13478 0.095935 CTGCGAGTTTTGATCTGGCG 59.904 55.000 0.00 0.00 38.99 5.69
5659 13479 1.226128 GCGAGTTTTGATCTGGCGC 60.226 57.895 0.00 0.00 36.12 6.53
5660 13480 1.911293 GCGAGTTTTGATCTGGCGCA 61.911 55.000 10.83 0.00 42.21 6.09
5661 13481 0.095935 CGAGTTTTGATCTGGCGCAG 59.904 55.000 10.83 4.99 0.00 5.18
5677 13497 4.753662 AGCTCGTCCCAGCCCGTA 62.754 66.667 0.00 0.00 40.65 4.02
5678 13498 3.766691 GCTCGTCCCAGCCCGTAA 61.767 66.667 0.00 0.00 32.76 3.18
5679 13499 2.975536 CTCGTCCCAGCCCGTAAA 59.024 61.111 0.00 0.00 0.00 2.01
5680 13500 1.294138 CTCGTCCCAGCCCGTAAAA 59.706 57.895 0.00 0.00 0.00 1.52
5681 13501 1.004679 TCGTCCCAGCCCGTAAAAC 60.005 57.895 0.00 0.00 0.00 2.43
5682 13502 1.004200 CGTCCCAGCCCGTAAAACT 60.004 57.895 0.00 0.00 0.00 2.66
5683 13503 0.604511 CGTCCCAGCCCGTAAAACTT 60.605 55.000 0.00 0.00 0.00 2.66
5684 13504 1.338011 CGTCCCAGCCCGTAAAACTTA 60.338 52.381 0.00 0.00 0.00 2.24
5685 13505 2.781923 GTCCCAGCCCGTAAAACTTAA 58.218 47.619 0.00 0.00 0.00 1.85
5686 13506 3.148412 GTCCCAGCCCGTAAAACTTAAA 58.852 45.455 0.00 0.00 0.00 1.52
5687 13507 3.760151 GTCCCAGCCCGTAAAACTTAAAT 59.240 43.478 0.00 0.00 0.00 1.40
5688 13508 4.219070 GTCCCAGCCCGTAAAACTTAAATT 59.781 41.667 0.00 0.00 0.00 1.82
5689 13509 4.218852 TCCCAGCCCGTAAAACTTAAATTG 59.781 41.667 0.00 0.00 0.00 2.32
5690 13510 4.218852 CCCAGCCCGTAAAACTTAAATTGA 59.781 41.667 0.00 0.00 0.00 2.57
5691 13511 5.105513 CCCAGCCCGTAAAACTTAAATTGAT 60.106 40.000 0.00 0.00 0.00 2.57
5692 13512 6.033966 CCAGCCCGTAAAACTTAAATTGATC 58.966 40.000 0.00 0.00 0.00 2.92
5693 13513 6.127730 CCAGCCCGTAAAACTTAAATTGATCT 60.128 38.462 0.00 0.00 0.00 2.75
5694 13514 7.066525 CCAGCCCGTAAAACTTAAATTGATCTA 59.933 37.037 0.00 0.00 0.00 1.98
5695 13515 8.621286 CAGCCCGTAAAACTTAAATTGATCTAT 58.379 33.333 0.00 0.00 0.00 1.98
5696 13516 8.837389 AGCCCGTAAAACTTAAATTGATCTATC 58.163 33.333 0.00 0.00 0.00 2.08
5697 13517 8.837389 GCCCGTAAAACTTAAATTGATCTATCT 58.163 33.333 0.00 0.00 0.00 1.98
5713 13533 9.740239 TTGATCTATCTTAATGCTTTCATTTGC 57.260 29.630 0.00 0.00 42.51 3.68
5714 13534 9.128404 TGATCTATCTTAATGCTTTCATTTGCT 57.872 29.630 0.00 0.00 42.51 3.91
5715 13535 9.962783 GATCTATCTTAATGCTTTCATTTGCTT 57.037 29.630 0.00 0.00 42.51 3.91
5719 13539 6.890558 TCTTAATGCTTTCATTTGCTTTTGC 58.109 32.000 0.00 0.00 42.51 3.68
5720 13540 6.482641 TCTTAATGCTTTCATTTGCTTTTGCA 59.517 30.769 0.00 0.00 46.48 4.08
5783 13603 9.528018 CTAGAATAGCAAAACCAAAGAAAACAA 57.472 29.630 0.00 0.00 0.00 2.83
5784 13604 8.424274 AGAATAGCAAAACCAAAGAAAACAAG 57.576 30.769 0.00 0.00 0.00 3.16
5785 13605 8.257306 AGAATAGCAAAACCAAAGAAAACAAGA 58.743 29.630 0.00 0.00 0.00 3.02
5786 13606 8.785329 AATAGCAAAACCAAAGAAAACAAGAA 57.215 26.923 0.00 0.00 0.00 2.52
5787 13607 6.480524 AGCAAAACCAAAGAAAACAAGAAC 57.519 33.333 0.00 0.00 0.00 3.01
5788 13608 5.411361 AGCAAAACCAAAGAAAACAAGAACC 59.589 36.000 0.00 0.00 0.00 3.62
5789 13609 5.180304 GCAAAACCAAAGAAAACAAGAACCA 59.820 36.000 0.00 0.00 0.00 3.67
5790 13610 6.598525 CAAAACCAAAGAAAACAAGAACCAC 58.401 36.000 0.00 0.00 0.00 4.16
5791 13611 5.476091 AACCAAAGAAAACAAGAACCACA 57.524 34.783 0.00 0.00 0.00 4.17
5792 13612 5.476091 ACCAAAGAAAACAAGAACCACAA 57.524 34.783 0.00 0.00 0.00 3.33
5793 13613 5.478407 ACCAAAGAAAACAAGAACCACAAG 58.522 37.500 0.00 0.00 0.00 3.16
5794 13614 5.245075 ACCAAAGAAAACAAGAACCACAAGA 59.755 36.000 0.00 0.00 0.00 3.02
5795 13615 6.162777 CCAAAGAAAACAAGAACCACAAGAA 58.837 36.000 0.00 0.00 0.00 2.52
5796 13616 6.818142 CCAAAGAAAACAAGAACCACAAGAAT 59.182 34.615 0.00 0.00 0.00 2.40
5797 13617 7.201548 CCAAAGAAAACAAGAACCACAAGAATG 60.202 37.037 0.00 0.00 0.00 2.67
5798 13618 5.351458 AGAAAACAAGAACCACAAGAATGC 58.649 37.500 0.00 0.00 0.00 3.56
5799 13619 4.734398 AAACAAGAACCACAAGAATGCA 57.266 36.364 0.00 0.00 0.00 3.96
5800 13620 4.942761 AACAAGAACCACAAGAATGCAT 57.057 36.364 0.00 0.00 0.00 3.96
5801 13621 4.942761 ACAAGAACCACAAGAATGCATT 57.057 36.364 12.83 12.83 0.00 3.56
5802 13622 5.280654 ACAAGAACCACAAGAATGCATTT 57.719 34.783 14.33 0.77 0.00 2.32
5803 13623 5.291971 ACAAGAACCACAAGAATGCATTTC 58.708 37.500 14.33 7.05 34.31 2.17
5804 13624 5.163426 ACAAGAACCACAAGAATGCATTTCA 60.163 36.000 14.33 0.00 36.75 2.69
5805 13625 5.130292 AGAACCACAAGAATGCATTTCAG 57.870 39.130 14.33 8.71 36.75 3.02
5806 13626 4.828939 AGAACCACAAGAATGCATTTCAGA 59.171 37.500 14.33 0.00 36.75 3.27
5807 13627 5.302568 AGAACCACAAGAATGCATTTCAGAA 59.697 36.000 14.33 0.00 36.75 3.02
5808 13628 5.130292 ACCACAAGAATGCATTTCAGAAG 57.870 39.130 14.33 4.77 36.75 2.85
5809 13629 4.828939 ACCACAAGAATGCATTTCAGAAGA 59.171 37.500 14.33 0.00 36.75 2.87
5810 13630 5.479375 ACCACAAGAATGCATTTCAGAAGAT 59.521 36.000 14.33 0.00 36.75 2.40
5811 13631 6.014840 ACCACAAGAATGCATTTCAGAAGATT 60.015 34.615 14.33 0.00 36.75 2.40
5812 13632 6.872020 CCACAAGAATGCATTTCAGAAGATTT 59.128 34.615 14.33 0.00 36.75 2.17
5813 13633 7.063074 CCACAAGAATGCATTTCAGAAGATTTC 59.937 37.037 14.33 0.00 36.75 2.17
5814 13634 7.063074 CACAAGAATGCATTTCAGAAGATTTCC 59.937 37.037 14.33 0.00 36.75 3.13
5815 13635 6.845758 AGAATGCATTTCAGAAGATTTCCA 57.154 33.333 14.33 0.00 36.75 3.53
5816 13636 7.235935 AGAATGCATTTCAGAAGATTTCCAA 57.764 32.000 14.33 0.00 36.75 3.53
5817 13637 7.095270 AGAATGCATTTCAGAAGATTTCCAAC 58.905 34.615 14.33 0.00 36.75 3.77
5818 13638 6.600882 ATGCATTTCAGAAGATTTCCAACT 57.399 33.333 0.00 0.00 0.00 3.16
5819 13639 6.409524 TGCATTTCAGAAGATTTCCAACTT 57.590 33.333 0.00 0.00 0.00 2.66
5820 13640 6.449698 TGCATTTCAGAAGATTTCCAACTTC 58.550 36.000 0.00 0.00 41.64 3.01
5821 13641 5.866092 GCATTTCAGAAGATTTCCAACTTCC 59.134 40.000 0.00 0.00 42.09 3.46
5822 13642 6.517194 GCATTTCAGAAGATTTCCAACTTCCA 60.517 38.462 0.00 0.00 42.09 3.53
5823 13643 7.609056 CATTTCAGAAGATTTCCAACTTCCAT 58.391 34.615 0.00 0.00 42.09 3.41
5824 13644 8.742777 CATTTCAGAAGATTTCCAACTTCCATA 58.257 33.333 0.00 0.00 42.09 2.74
5825 13645 8.704849 TTTCAGAAGATTTCCAACTTCCATAA 57.295 30.769 0.00 0.00 42.09 1.90
5826 13646 7.687941 TCAGAAGATTTCCAACTTCCATAAC 57.312 36.000 0.00 0.00 42.09 1.89
5827 13647 7.461749 TCAGAAGATTTCCAACTTCCATAACT 58.538 34.615 0.00 0.00 42.09 2.24
5828 13648 7.391554 TCAGAAGATTTCCAACTTCCATAACTG 59.608 37.037 0.00 0.00 42.09 3.16
5829 13649 5.904362 AGATTTCCAACTTCCATAACTGC 57.096 39.130 0.00 0.00 0.00 4.40
5830 13650 5.574188 AGATTTCCAACTTCCATAACTGCT 58.426 37.500 0.00 0.00 0.00 4.24
5831 13651 5.649831 AGATTTCCAACTTCCATAACTGCTC 59.350 40.000 0.00 0.00 0.00 4.26
5832 13652 3.350219 TCCAACTTCCATAACTGCTCC 57.650 47.619 0.00 0.00 0.00 4.70
5833 13653 2.026262 TCCAACTTCCATAACTGCTCCC 60.026 50.000 0.00 0.00 0.00 4.30
5834 13654 2.290896 CCAACTTCCATAACTGCTCCCA 60.291 50.000 0.00 0.00 0.00 4.37
5835 13655 2.749621 CAACTTCCATAACTGCTCCCAC 59.250 50.000 0.00 0.00 0.00 4.61
5836 13656 2.269940 ACTTCCATAACTGCTCCCACT 58.730 47.619 0.00 0.00 0.00 4.00
5837 13657 3.450904 ACTTCCATAACTGCTCCCACTA 58.549 45.455 0.00 0.00 0.00 2.74
5838 13658 3.452627 ACTTCCATAACTGCTCCCACTAG 59.547 47.826 0.00 0.00 0.00 2.57
5839 13659 3.116096 TCCATAACTGCTCCCACTAGT 57.884 47.619 0.00 0.00 0.00 2.57
5840 13660 3.450904 TCCATAACTGCTCCCACTAGTT 58.549 45.455 0.00 0.00 38.19 2.24
5841 13661 3.197766 TCCATAACTGCTCCCACTAGTTG 59.802 47.826 0.00 0.00 36.22 3.16
5842 13662 3.197766 CCATAACTGCTCCCACTAGTTGA 59.802 47.826 0.00 0.00 36.22 3.18
5843 13663 4.323485 CCATAACTGCTCCCACTAGTTGAA 60.323 45.833 0.00 0.00 36.22 2.69
5844 13664 3.409026 AACTGCTCCCACTAGTTGAAG 57.591 47.619 0.00 0.00 33.69 3.02
5845 13665 1.002544 ACTGCTCCCACTAGTTGAAGC 59.997 52.381 0.00 0.00 0.00 3.86
5846 13666 1.002430 CTGCTCCCACTAGTTGAAGCA 59.998 52.381 7.65 7.65 0.00 3.91
5847 13667 1.419762 TGCTCCCACTAGTTGAAGCAA 59.580 47.619 5.34 0.00 0.00 3.91
5848 13668 2.040278 TGCTCCCACTAGTTGAAGCAAT 59.960 45.455 5.34 0.00 0.00 3.56
5849 13669 3.263170 TGCTCCCACTAGTTGAAGCAATA 59.737 43.478 5.34 0.00 0.00 1.90
5850 13670 4.080356 TGCTCCCACTAGTTGAAGCAATAT 60.080 41.667 5.34 0.00 0.00 1.28
5851 13671 4.513318 GCTCCCACTAGTTGAAGCAATATC 59.487 45.833 0.00 0.00 0.00 1.63
5852 13672 5.686124 GCTCCCACTAGTTGAAGCAATATCT 60.686 44.000 0.00 0.00 0.00 1.98
5853 13673 6.313519 TCCCACTAGTTGAAGCAATATCTT 57.686 37.500 0.00 0.00 0.00 2.40
5854 13674 6.721318 TCCCACTAGTTGAAGCAATATCTTT 58.279 36.000 0.00 0.00 0.00 2.52
5855 13675 7.175104 TCCCACTAGTTGAAGCAATATCTTTT 58.825 34.615 0.00 0.00 0.00 2.27
5856 13676 7.669722 TCCCACTAGTTGAAGCAATATCTTTTT 59.330 33.333 0.00 0.00 0.00 1.94
5857 13677 7.970614 CCCACTAGTTGAAGCAATATCTTTTTC 59.029 37.037 0.00 0.00 0.00 2.29
5858 13678 8.514594 CCACTAGTTGAAGCAATATCTTTTTCA 58.485 33.333 0.00 0.00 0.00 2.69
5861 13681 7.823149 AGTTGAAGCAATATCTTTTTCATGC 57.177 32.000 0.00 0.00 0.00 4.06
5862 13682 7.380536 AGTTGAAGCAATATCTTTTTCATGCA 58.619 30.769 0.00 0.00 36.30 3.96
5863 13683 8.038944 AGTTGAAGCAATATCTTTTTCATGCAT 58.961 29.630 0.00 0.00 36.30 3.96
5864 13684 7.997107 TGAAGCAATATCTTTTTCATGCATC 57.003 32.000 0.00 0.00 36.30 3.91
5865 13685 7.778083 TGAAGCAATATCTTTTTCATGCATCT 58.222 30.769 0.00 0.00 36.30 2.90
5866 13686 8.905850 TGAAGCAATATCTTTTTCATGCATCTA 58.094 29.630 0.00 0.00 36.30 1.98
5867 13687 9.909644 GAAGCAATATCTTTTTCATGCATCTAT 57.090 29.630 0.00 0.00 36.30 1.98
5869 13689 9.692749 AGCAATATCTTTTTCATGCATCTATTG 57.307 29.630 0.00 2.63 36.30 1.90
5870 13690 9.472361 GCAATATCTTTTTCATGCATCTATTGT 57.528 29.630 0.00 0.00 34.10 2.71
5875 13695 9.745880 ATCTTTTTCATGCATCTATTGTTGATC 57.254 29.630 0.00 0.00 0.00 2.92
5876 13696 8.963725 TCTTTTTCATGCATCTATTGTTGATCT 58.036 29.630 0.00 0.00 0.00 2.75
5877 13697 8.920509 TTTTTCATGCATCTATTGTTGATCTG 57.079 30.769 0.00 0.00 0.00 2.90
5878 13698 7.634671 TTTCATGCATCTATTGTTGATCTGT 57.365 32.000 0.00 0.00 0.00 3.41
5879 13699 6.613755 TCATGCATCTATTGTTGATCTGTG 57.386 37.500 0.00 0.00 0.00 3.66
5880 13700 5.529800 TCATGCATCTATTGTTGATCTGTGG 59.470 40.000 0.00 0.00 0.00 4.17
5881 13701 5.101648 TGCATCTATTGTTGATCTGTGGA 57.898 39.130 0.00 0.00 0.00 4.02
5882 13702 5.687780 TGCATCTATTGTTGATCTGTGGAT 58.312 37.500 0.00 0.00 34.45 3.41
5883 13703 6.124340 TGCATCTATTGTTGATCTGTGGATT 58.876 36.000 0.00 0.00 31.46 3.01
5884 13704 6.261603 TGCATCTATTGTTGATCTGTGGATTC 59.738 38.462 0.00 0.00 31.46 2.52
5885 13705 6.485984 GCATCTATTGTTGATCTGTGGATTCT 59.514 38.462 0.00 0.00 31.46 2.40
5886 13706 7.013083 GCATCTATTGTTGATCTGTGGATTCTT 59.987 37.037 0.00 0.00 31.46 2.52
5887 13707 7.854557 TCTATTGTTGATCTGTGGATTCTTG 57.145 36.000 0.00 0.00 31.46 3.02
5888 13708 7.623630 TCTATTGTTGATCTGTGGATTCTTGA 58.376 34.615 0.00 0.00 31.46 3.02
5889 13709 8.270030 TCTATTGTTGATCTGTGGATTCTTGAT 58.730 33.333 0.00 0.00 31.46 2.57
5890 13710 6.748333 TTGTTGATCTGTGGATTCTTGATC 57.252 37.500 0.00 0.00 35.44 2.92
5891 13711 6.058553 TGTTGATCTGTGGATTCTTGATCT 57.941 37.500 0.00 0.00 35.77 2.75
5892 13712 6.479006 TGTTGATCTGTGGATTCTTGATCTT 58.521 36.000 0.00 0.00 35.77 2.40
5893 13713 6.373495 TGTTGATCTGTGGATTCTTGATCTTG 59.627 38.462 0.00 0.00 35.77 3.02
5894 13714 6.058553 TGATCTGTGGATTCTTGATCTTGT 57.941 37.500 0.00 0.00 35.77 3.16
5895 13715 6.479006 TGATCTGTGGATTCTTGATCTTGTT 58.521 36.000 0.00 0.00 35.77 2.83
5896 13716 6.944290 TGATCTGTGGATTCTTGATCTTGTTT 59.056 34.615 0.00 0.00 35.77 2.83
5897 13717 7.449395 TGATCTGTGGATTCTTGATCTTGTTTT 59.551 33.333 0.00 0.00 35.77 2.43
5898 13718 6.973843 TCTGTGGATTCTTGATCTTGTTTTG 58.026 36.000 0.00 0.00 35.02 2.44
5899 13719 6.547141 TCTGTGGATTCTTGATCTTGTTTTGT 59.453 34.615 0.00 0.00 35.02 2.83
5900 13720 7.068593 TCTGTGGATTCTTGATCTTGTTTTGTT 59.931 33.333 0.00 0.00 35.02 2.83
5901 13721 8.231692 TGTGGATTCTTGATCTTGTTTTGTTA 57.768 30.769 0.00 0.00 35.02 2.41
5902 13722 8.690884 TGTGGATTCTTGATCTTGTTTTGTTAA 58.309 29.630 0.00 0.00 35.02 2.01
5903 13723 9.696917 GTGGATTCTTGATCTTGTTTTGTTAAT 57.303 29.630 0.00 0.00 35.02 1.40
5912 13732 9.195411 TGATCTTGTTTTGTTAATTCTTGATGC 57.805 29.630 0.00 0.00 0.00 3.91
5913 13733 9.415544 GATCTTGTTTTGTTAATTCTTGATGCT 57.584 29.630 0.00 0.00 0.00 3.79
5914 13734 9.768662 ATCTTGTTTTGTTAATTCTTGATGCTT 57.231 25.926 0.00 0.00 0.00 3.91
5915 13735 9.598517 TCTTGTTTTGTTAATTCTTGATGCTTT 57.401 25.926 0.00 0.00 0.00 3.51
5916 13736 9.853921 CTTGTTTTGTTAATTCTTGATGCTTTC 57.146 29.630 0.00 0.00 0.00 2.62
5917 13737 9.598517 TTGTTTTGTTAATTCTTGATGCTTTCT 57.401 25.926 0.00 0.00 0.00 2.52
5918 13738 9.598517 TGTTTTGTTAATTCTTGATGCTTTCTT 57.401 25.926 0.00 0.00 0.00 2.52
5920 13740 9.814899 TTTTGTTAATTCTTGATGCTTTCTTCA 57.185 25.926 0.00 0.00 0.00 3.02
5921 13741 9.985730 TTTGTTAATTCTTGATGCTTTCTTCAT 57.014 25.926 0.00 0.00 0.00 2.57
5922 13742 9.985730 TTGTTAATTCTTGATGCTTTCTTCATT 57.014 25.926 0.00 0.00 0.00 2.57
5923 13743 9.630098 TGTTAATTCTTGATGCTTTCTTCATTC 57.370 29.630 0.00 0.00 0.00 2.67
5924 13744 9.852091 GTTAATTCTTGATGCTTTCTTCATTCT 57.148 29.630 0.00 0.00 0.00 2.40
5926 13746 8.983307 AATTCTTGATGCTTTCTTCATTCTTC 57.017 30.769 0.00 0.00 0.00 2.87
5927 13747 7.514784 TTCTTGATGCTTTCTTCATTCTTCA 57.485 32.000 0.00 0.00 0.00 3.02
5928 13748 7.698506 TCTTGATGCTTTCTTCATTCTTCAT 57.301 32.000 0.00 0.00 0.00 2.57
5929 13749 7.759465 TCTTGATGCTTTCTTCATTCTTCATC 58.241 34.615 0.00 0.00 0.00 2.92
5930 13750 7.610692 TCTTGATGCTTTCTTCATTCTTCATCT 59.389 33.333 0.00 0.00 32.62 2.90
5931 13751 7.698506 TGATGCTTTCTTCATTCTTCATCTT 57.301 32.000 0.00 0.00 32.62 2.40
5932 13752 8.118976 TGATGCTTTCTTCATTCTTCATCTTT 57.881 30.769 0.00 0.00 32.62 2.52
5933 13753 8.027189 TGATGCTTTCTTCATTCTTCATCTTTG 58.973 33.333 0.00 0.00 32.62 2.77
5934 13754 6.684686 TGCTTTCTTCATTCTTCATCTTTGG 58.315 36.000 0.00 0.00 0.00 3.28
5935 13755 6.266103 TGCTTTCTTCATTCTTCATCTTTGGT 59.734 34.615 0.00 0.00 0.00 3.67
5936 13756 7.150640 GCTTTCTTCATTCTTCATCTTTGGTT 58.849 34.615 0.00 0.00 0.00 3.67
5937 13757 7.654923 GCTTTCTTCATTCTTCATCTTTGGTTT 59.345 33.333 0.00 0.00 0.00 3.27
5938 13758 9.189723 CTTTCTTCATTCTTCATCTTTGGTTTC 57.810 33.333 0.00 0.00 0.00 2.78
5939 13759 6.902341 TCTTCATTCTTCATCTTTGGTTTCG 58.098 36.000 0.00 0.00 0.00 3.46
5940 13760 6.710295 TCTTCATTCTTCATCTTTGGTTTCGA 59.290 34.615 0.00 0.00 0.00 3.71
5941 13761 6.875948 TCATTCTTCATCTTTGGTTTCGAA 57.124 33.333 0.00 0.00 0.00 3.71
5942 13762 6.902341 TCATTCTTCATCTTTGGTTTCGAAG 58.098 36.000 0.00 0.00 36.05 3.79
5943 13763 6.710295 TCATTCTTCATCTTTGGTTTCGAAGA 59.290 34.615 0.00 0.00 44.81 2.87
5944 13764 6.935741 TTCTTCATCTTTGGTTTCGAAGAA 57.064 33.333 8.00 8.00 44.15 2.52
5945 13765 6.545504 TCTTCATCTTTGGTTTCGAAGAAG 57.454 37.500 10.21 10.21 44.15 2.85
5946 13766 6.055588 TCTTCATCTTTGGTTTCGAAGAAGT 58.944 36.000 14.05 2.31 44.15 3.01
5947 13767 6.542370 TCTTCATCTTTGGTTTCGAAGAAGTT 59.458 34.615 14.05 4.96 44.15 2.66
5948 13768 6.060028 TCATCTTTGGTTTCGAAGAAGTTG 57.940 37.500 0.00 7.44 44.15 3.16
5949 13769 5.820423 TCATCTTTGGTTTCGAAGAAGTTGA 59.180 36.000 15.06 15.06 44.15 3.18
5950 13770 5.479716 TCTTTGGTTTCGAAGAAGTTGAC 57.520 39.130 0.00 0.00 45.90 3.18
5951 13771 3.936902 TTGGTTTCGAAGAAGTTGACG 57.063 42.857 0.00 0.00 45.90 4.35
5952 13772 2.896168 TGGTTTCGAAGAAGTTGACGT 58.104 42.857 0.00 0.00 45.90 4.34
5953 13773 3.264104 TGGTTTCGAAGAAGTTGACGTT 58.736 40.909 0.00 0.00 45.90 3.99
5954 13774 3.062909 TGGTTTCGAAGAAGTTGACGTTG 59.937 43.478 0.00 0.00 45.90 4.10
5955 13775 3.027029 GTTTCGAAGAAGTTGACGTTGC 58.973 45.455 0.00 0.00 45.90 4.17
5956 13776 2.218953 TCGAAGAAGTTGACGTTGCT 57.781 45.000 0.00 0.00 0.00 3.91
5957 13777 2.546778 TCGAAGAAGTTGACGTTGCTT 58.453 42.857 0.00 0.00 0.00 3.91
5958 13778 2.538449 TCGAAGAAGTTGACGTTGCTTC 59.462 45.455 15.33 15.33 38.97 3.86
5959 13779 2.348591 CGAAGAAGTTGACGTTGCTTCC 60.349 50.000 17.87 8.12 39.36 3.46
5960 13780 1.594331 AGAAGTTGACGTTGCTTCCC 58.406 50.000 17.87 2.83 39.36 3.97
5961 13781 0.591659 GAAGTTGACGTTGCTTCCCC 59.408 55.000 13.31 0.00 34.26 4.81
5962 13782 0.182775 AAGTTGACGTTGCTTCCCCT 59.817 50.000 0.00 0.00 0.00 4.79
5963 13783 0.250338 AGTTGACGTTGCTTCCCCTC 60.250 55.000 0.00 0.00 0.00 4.30
5964 13784 0.250338 GTTGACGTTGCTTCCCCTCT 60.250 55.000 0.00 0.00 0.00 3.69
5965 13785 1.001633 GTTGACGTTGCTTCCCCTCTA 59.998 52.381 0.00 0.00 0.00 2.43
5966 13786 0.895530 TGACGTTGCTTCCCCTCTAG 59.104 55.000 0.00 0.00 0.00 2.43
5967 13787 0.896226 GACGTTGCTTCCCCTCTAGT 59.104 55.000 0.00 0.00 0.00 2.57
5968 13788 1.275573 GACGTTGCTTCCCCTCTAGTT 59.724 52.381 0.00 0.00 0.00 2.24
5969 13789 1.002087 ACGTTGCTTCCCCTCTAGTTG 59.998 52.381 0.00 0.00 0.00 3.16
5970 13790 1.454201 GTTGCTTCCCCTCTAGTTGC 58.546 55.000 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 3.782889 AAGGCGAAATAGGACAAATGC 57.217 42.857 0.00 0.00 0.00 3.56
30 31 4.007659 GGAGAAAAGGCGAAATAGGACAA 58.992 43.478 0.00 0.00 0.00 3.18
37 38 5.728637 AGAAAATGGAGAAAAGGCGAAAT 57.271 34.783 0.00 0.00 0.00 2.17
53 54 8.868522 TCATCAACTATGGAAGTGAAGAAAAT 57.131 30.769 0.00 0.00 38.88 1.82
76 77 2.303890 ACATGCAGAGGAGACACATTCA 59.696 45.455 0.00 0.00 0.00 2.57
84 85 3.327757 ACAGGTAAAACATGCAGAGGAGA 59.672 43.478 0.00 0.00 32.34 3.71
162 165 4.081309 TGGTATGCCTCAACCTACAACTAC 60.081 45.833 0.16 0.00 36.67 2.73
190 193 3.238788 ACCAAGGTCTTTAGGGTTTGG 57.761 47.619 0.00 0.00 40.59 3.28
265 268 5.931146 TGATCCCAAATTCAAATGAAAACCG 59.069 36.000 0.00 0.00 37.61 4.44
300 304 2.584498 AGGAATGGAGCAAGGGAGAATT 59.416 45.455 0.00 0.00 0.00 2.17
301 305 2.212420 AGGAATGGAGCAAGGGAGAAT 58.788 47.619 0.00 0.00 0.00 2.40
395 399 9.151177 ACCCGTTATTCCTTTACAATCTATCTA 57.849 33.333 0.00 0.00 0.00 1.98
406 410 5.617528 TGAGCATACCCGTTATTCCTTTA 57.382 39.130 0.00 0.00 0.00 1.85
417 421 2.905075 TCAAGTCATTGAGCATACCCG 58.095 47.619 0.00 0.00 40.54 5.28
435 439 1.330655 GGCCGACAGATTCCTCCTCA 61.331 60.000 0.00 0.00 0.00 3.86
524 528 1.072331 ACGCTTCATTTCCAGGACACT 59.928 47.619 0.00 0.00 0.00 3.55
529 533 1.522668 TGTGACGCTTCATTTCCAGG 58.477 50.000 0.00 0.00 33.11 4.45
610 3649 8.708742 CGATACAATGCTTAAAATAGAATCCGA 58.291 33.333 0.00 0.00 0.00 4.55
611 3650 8.495949 ACGATACAATGCTTAAAATAGAATCCG 58.504 33.333 0.00 0.00 0.00 4.18
612 3651 9.813080 GACGATACAATGCTTAAAATAGAATCC 57.187 33.333 0.00 0.00 0.00 3.01
724 3764 6.712547 AGAAGTGAAAAGAGGTTACAGGATTG 59.287 38.462 0.00 0.00 0.00 2.67
767 3807 4.049186 TGCTGAGAGTTCGTCAGTTTTAC 58.951 43.478 2.30 0.00 43.00 2.01
815 3968 0.107945 GGCGCATGAGAGGACTTCTT 60.108 55.000 10.83 0.00 35.87 2.52
909 4062 0.326927 AGCCGAGATTCCCCGAAAAA 59.673 50.000 0.00 0.00 0.00 1.94
914 4067 3.930012 GGGAGCCGAGATTCCCCG 61.930 72.222 0.00 0.00 46.15 5.73
1079 4233 2.034305 CGAGGAAGTTATACGAGTGGGG 59.966 54.545 0.00 0.00 0.00 4.96
1080 4234 2.034305 CCGAGGAAGTTATACGAGTGGG 59.966 54.545 0.00 0.00 0.00 4.61
1121 4540 1.225637 CAAACGGATTCGCGAACGG 60.226 57.895 28.04 23.45 40.63 4.44
1141 4560 3.942439 GCCGCCCTATCTCCCACC 61.942 72.222 0.00 0.00 0.00 4.61
1142 4561 4.301027 CGCCGCCCTATCTCCCAC 62.301 72.222 0.00 0.00 0.00 4.61
1144 4563 3.686045 CTCGCCGCCCTATCTCCC 61.686 72.222 0.00 0.00 0.00 4.30
1166 4585 0.323725 AAATCACAAGAGCGCCCCAT 60.324 50.000 2.29 0.00 0.00 4.00
1172 4591 1.002366 CGGGAGAAATCACAAGAGCG 58.998 55.000 0.00 0.00 0.00 5.03
1212 4632 4.433022 CGAACACGAAGCAATGAGTACTTC 60.433 45.833 0.00 0.00 37.13 3.01
1213 4633 3.428870 CGAACACGAAGCAATGAGTACTT 59.571 43.478 0.00 0.00 0.00 2.24
1280 4700 1.135721 CACGAGCAGATCATCCAGTCA 59.864 52.381 0.00 0.00 0.00 3.41
1356 4778 6.758886 GGCAAAGAATCGATCTCTCTTCTTTA 59.241 38.462 17.32 0.00 42.83 1.85
1380 4802 4.750098 CACTACAAGCCACCTTATTATCGG 59.250 45.833 0.00 0.00 0.00 4.18
1522 4953 1.338200 ACTAAGAAAGCTCCCTGTGCG 60.338 52.381 0.00 0.00 35.28 5.34
1526 4957 3.503748 CCAAACACTAAGAAAGCTCCCTG 59.496 47.826 0.00 0.00 0.00 4.45
1608 5043 3.181445 TGGTTCAATACTCTGCAACCTGT 60.181 43.478 0.00 0.00 37.89 4.00
1686 5149 8.427276 GTTTACCATAAGGGCAATACTACTACT 58.573 37.037 0.00 0.00 42.05 2.57
1687 5150 8.206189 TGTTTACCATAAGGGCAATACTACTAC 58.794 37.037 0.00 0.00 42.05 2.73
1688 5151 8.206189 GTGTTTACCATAAGGGCAATACTACTA 58.794 37.037 0.00 0.00 42.05 1.82
1920 5402 2.579207 GCTACATTGCGGTAGACTGA 57.421 50.000 12.54 0.00 42.68 3.41
1950 5432 2.829120 TGGTAATGAGGTGACGTGATCA 59.171 45.455 0.00 0.00 33.79 2.92
2145 5642 5.541868 TCAGGAGAGATTCTTTCACAGAACT 59.458 40.000 6.55 0.00 44.70 3.01
2164 5661 2.986050 ACAAAGGGTAAGGACTCAGGA 58.014 47.619 0.00 0.00 0.00 3.86
2336 5833 6.701400 AGTGTCCAAATTTCTATTTGTTGTGC 59.299 34.615 9.11 0.00 45.96 4.57
2349 5846 8.431910 TCTCTTACCTAGTAGTGTCCAAATTT 57.568 34.615 0.00 0.00 0.00 1.82
2465 5966 6.731164 ACAACGGTAACAGGTTATTTTCTTG 58.269 36.000 0.00 0.00 0.00 3.02
2469 5971 6.238814 CCTCAACAACGGTAACAGGTTATTTT 60.239 38.462 0.00 0.00 0.00 1.82
2479 5981 1.873698 TCTGCCTCAACAACGGTAAC 58.126 50.000 0.00 0.00 0.00 2.50
2875 6390 3.949842 ACAAGTACTCCCTCCGTAAAC 57.050 47.619 0.00 0.00 0.00 2.01
2897 6412 6.313519 AGAGAGGTTCCTTGTATGCAATTA 57.686 37.500 0.00 0.00 33.65 1.40
3157 6682 7.658982 GTCTGAATTGGCTAGATGTTGATATCA 59.341 37.037 0.00 0.00 0.00 2.15
3169 6694 6.318144 AGAACAATCATGTCTGAATTGGCTAG 59.682 38.462 8.45 0.00 39.40 3.42
3234 6838 7.664552 TTAGGTATAACTAAGCAGCCTAACA 57.335 36.000 6.12 0.00 33.69 2.41
3264 6868 2.119495 GAATTACCCTCAGGCCTCAGA 58.881 52.381 4.61 0.00 36.11 3.27
3323 6927 9.712359 GCTACCGTTAAAAAGAAACTATAATGG 57.288 33.333 0.00 0.00 38.19 3.16
3354 6958 3.849527 AGGAAGAACAAAGGGAGCAAAT 58.150 40.909 0.00 0.00 0.00 2.32
3375 6979 5.708230 ACCACGATTATTTCAAAGGCACTAA 59.292 36.000 0.00 0.00 38.49 2.24
3524 7128 5.172687 TCCCAACACAGCATTAGAACATA 57.827 39.130 0.00 0.00 0.00 2.29
3527 7131 5.391312 AAATCCCAACACAGCATTAGAAC 57.609 39.130 0.00 0.00 0.00 3.01
3559 7163 6.239858 CCCCTTCCACCACAAAATTTAAGATT 60.240 38.462 0.00 0.00 0.00 2.40
3622 7226 3.327757 TGTCATTCTCTAGCAAGTTGGGT 59.672 43.478 4.75 0.00 0.00 4.51
3728 7332 5.437043 ACCATATAACCTAATTTCCCACCCA 59.563 40.000 0.00 0.00 0.00 4.51
3729 7333 5.960704 ACCATATAACCTAATTTCCCACCC 58.039 41.667 0.00 0.00 0.00 4.61
3795 7399 3.115554 CAACTTTTTCTGGCCAAACTCG 58.884 45.455 7.01 0.00 0.00 4.18
4117 7721 8.902540 AATTCAATGCAAATATCATGCTGAAT 57.097 26.923 16.78 16.78 44.12 2.57
4227 7831 0.107654 AAATCTAGCAGCACCCGGTC 60.108 55.000 0.00 0.00 0.00 4.79
4348 9548 4.021807 TCTCCATAGTTACTCACGCACAAA 60.022 41.667 0.00 0.00 0.00 2.83
4382 9583 2.102578 GGCCATAAAGTCCTGCACAAT 58.897 47.619 0.00 0.00 0.00 2.71
4483 9685 2.169769 ACCGAGAATAGCCCGATTCAAA 59.830 45.455 6.42 0.00 38.14 2.69
4652 9882 6.155475 ACTTCCTGCTGTAGATATTGTCTC 57.845 41.667 0.00 0.00 38.42 3.36
4687 9917 8.372877 AGACAGGATTAGTGCTGCTATATATT 57.627 34.615 6.66 0.00 46.66 1.28
4729 9959 5.028549 ACACCCATACAGAATCATGACTC 57.971 43.478 0.00 0.00 0.00 3.36
4750 9980 7.606839 AGAAAAAGAGTAAATGGGCTGTAGTAC 59.393 37.037 0.00 0.00 0.00 2.73
4807 10040 6.961359 AGTGTTTCCTTTTGCAAGTAAAAC 57.039 33.333 15.86 15.86 35.87 2.43
4816 12527 4.805719 CCAGAAAGAAGTGTTTCCTTTTGC 59.194 41.667 0.00 0.00 37.16 3.68
5060 12871 4.381566 CGCTGTTCTTTTAACGGAAAATGG 59.618 41.667 0.97 0.00 36.44 3.16
5163 12980 1.705337 GAATACCGACGACCCGACGA 61.705 60.000 12.03 0.00 46.01 4.20
5187 13004 3.652274 TGTTTAACGACGACTAAAGGGG 58.348 45.455 0.00 0.00 0.00 4.79
5191 13008 7.872163 ATGTACATGTTTAACGACGACTAAA 57.128 32.000 7.78 2.37 0.00 1.85
5317 13137 3.548818 CCTTTCTTTTTCTCGGCACACTG 60.549 47.826 0.00 0.00 0.00 3.66
5322 13142 0.591170 CGCCTTTCTTTTTCTCGGCA 59.409 50.000 0.00 0.00 37.39 5.69
5349 13169 9.244799 GAAATTTCGTCTCTTTTGTTTTGGTAT 57.755 29.630 1.68 0.00 0.00 2.73
5350 13170 8.463607 AGAAATTTCGTCTCTTTTGTTTTGGTA 58.536 29.630 12.42 0.00 0.00 3.25
5399 13219 4.356289 TGGAAAACTAAAGAAGCAAACGC 58.644 39.130 0.00 0.00 0.00 4.84
5402 13222 7.762159 ACGATTTTGGAAAACTAAAGAAGCAAA 59.238 29.630 0.00 0.00 0.00 3.68
5403 13223 7.221838 CACGATTTTGGAAAACTAAAGAAGCAA 59.778 33.333 0.00 0.00 0.00 3.91
5422 13242 6.200286 CGCATAATTCCTGTAGTACACGATTT 59.800 38.462 0.00 6.75 0.00 2.17
5423 13243 5.690409 CGCATAATTCCTGTAGTACACGATT 59.310 40.000 0.00 3.13 0.00 3.34
5424 13244 5.009310 TCGCATAATTCCTGTAGTACACGAT 59.991 40.000 0.00 0.00 0.00 3.73
5426 13246 4.603985 TCGCATAATTCCTGTAGTACACG 58.396 43.478 0.00 0.00 0.00 4.49
5427 13247 5.462398 CCTTCGCATAATTCCTGTAGTACAC 59.538 44.000 0.00 0.00 0.00 2.90
5428 13248 5.597806 CCTTCGCATAATTCCTGTAGTACA 58.402 41.667 2.36 2.36 0.00 2.90
5429 13249 4.448060 GCCTTCGCATAATTCCTGTAGTAC 59.552 45.833 0.00 0.00 34.03 2.73
5431 13251 3.134804 AGCCTTCGCATAATTCCTGTAGT 59.865 43.478 0.00 0.00 37.52 2.73
5432 13252 3.496130 CAGCCTTCGCATAATTCCTGTAG 59.504 47.826 0.00 0.00 37.52 2.74
5433 13253 3.466836 CAGCCTTCGCATAATTCCTGTA 58.533 45.455 0.00 0.00 37.52 2.74
5434 13254 2.292267 CAGCCTTCGCATAATTCCTGT 58.708 47.619 0.00 0.00 37.52 4.00
5453 13273 1.609580 GCCAACCACTAACACGATCCA 60.610 52.381 0.00 0.00 0.00 3.41
5454 13274 1.084289 GCCAACCACTAACACGATCC 58.916 55.000 0.00 0.00 0.00 3.36
5466 13286 1.679944 GCTAGATGCTCTTGCCAACCA 60.680 52.381 0.00 0.00 38.90 3.67
5473 13293 2.606725 CGAGGTTTGCTAGATGCTCTTG 59.393 50.000 0.00 0.00 43.37 3.02
5476 13296 0.933796 GCGAGGTTTGCTAGATGCTC 59.066 55.000 0.00 0.00 43.37 4.26
5480 13300 1.202698 GGGATGCGAGGTTTGCTAGAT 60.203 52.381 0.00 0.00 0.00 1.98
5481 13301 0.178068 GGGATGCGAGGTTTGCTAGA 59.822 55.000 0.00 0.00 0.00 2.43
5482 13302 1.154205 CGGGATGCGAGGTTTGCTAG 61.154 60.000 0.00 0.00 0.00 3.42
5484 13304 2.436646 CGGGATGCGAGGTTTGCT 60.437 61.111 0.00 0.00 0.00 3.91
5485 13305 2.746277 ACGGGATGCGAGGTTTGC 60.746 61.111 0.00 0.00 0.00 3.68
5486 13306 2.452813 CGACGGGATGCGAGGTTTG 61.453 63.158 0.00 0.00 0.00 2.93
5488 13308 3.066190 TCGACGGGATGCGAGGTT 61.066 61.111 0.00 0.00 32.13 3.50
5489 13309 3.823330 GTCGACGGGATGCGAGGT 61.823 66.667 0.00 0.00 37.18 3.85
5490 13310 4.570663 GGTCGACGGGATGCGAGG 62.571 72.222 9.92 0.00 37.18 4.63
5491 13311 4.570663 GGGTCGACGGGATGCGAG 62.571 72.222 9.92 0.00 37.18 5.03
5495 13315 2.358193 TTATGCGGGTCGACGGGATG 62.358 60.000 18.16 5.02 32.82 3.51
5496 13316 2.129146 TTATGCGGGTCGACGGGAT 61.129 57.895 9.92 12.82 34.86 3.85
5497 13317 2.755064 TTATGCGGGTCGACGGGA 60.755 61.111 9.92 5.66 0.00 5.14
5498 13318 2.584143 GTTATGCGGGTCGACGGG 60.584 66.667 9.92 4.73 0.00 5.28
5499 13319 1.588139 GAGTTATGCGGGTCGACGG 60.588 63.158 9.92 5.12 0.00 4.79
5500 13320 0.248907 ATGAGTTATGCGGGTCGACG 60.249 55.000 9.92 0.00 0.00 5.12
5501 13321 1.935933 AATGAGTTATGCGGGTCGAC 58.064 50.000 7.13 7.13 0.00 4.20
5502 13322 2.276201 CAAATGAGTTATGCGGGTCGA 58.724 47.619 0.00 0.00 0.00 4.20
5503 13323 1.268032 GCAAATGAGTTATGCGGGTCG 60.268 52.381 0.00 0.00 0.00 4.79
5504 13324 1.742831 TGCAAATGAGTTATGCGGGTC 59.257 47.619 0.00 0.00 42.91 4.46
5505 13325 1.745087 CTGCAAATGAGTTATGCGGGT 59.255 47.619 0.00 0.00 42.91 5.28
5506 13326 2.480224 CTGCAAATGAGTTATGCGGG 57.520 50.000 0.00 0.00 42.91 6.13
5508 13328 3.848019 GTGAACTGCAAATGAGTTATGCG 59.152 43.478 0.00 0.00 42.91 4.73
5509 13329 3.848019 CGTGAACTGCAAATGAGTTATGC 59.152 43.478 0.00 0.00 40.45 3.14
5510 13330 5.034554 ACGTGAACTGCAAATGAGTTATG 57.965 39.130 0.00 0.00 33.71 1.90
5511 13331 6.795098 TTACGTGAACTGCAAATGAGTTAT 57.205 33.333 0.00 0.00 33.71 1.89
5512 13332 6.606234 TTTACGTGAACTGCAAATGAGTTA 57.394 33.333 0.00 0.00 33.71 2.24
5513 13333 5.493133 TTTACGTGAACTGCAAATGAGTT 57.507 34.783 0.00 0.00 36.33 3.01
5514 13334 5.270853 GTTTTACGTGAACTGCAAATGAGT 58.729 37.500 0.00 0.00 0.00 3.41
5515 13335 4.675114 GGTTTTACGTGAACTGCAAATGAG 59.325 41.667 13.88 0.00 0.00 2.90
5516 13336 4.096532 TGGTTTTACGTGAACTGCAAATGA 59.903 37.500 13.88 0.00 0.00 2.57
5517 13337 4.206200 GTGGTTTTACGTGAACTGCAAATG 59.794 41.667 13.88 0.00 0.00 2.32
5518 13338 4.097286 AGTGGTTTTACGTGAACTGCAAAT 59.903 37.500 13.88 0.00 0.00 2.32
5519 13339 3.440872 AGTGGTTTTACGTGAACTGCAAA 59.559 39.130 13.88 0.00 0.00 3.68
5520 13340 3.011119 AGTGGTTTTACGTGAACTGCAA 58.989 40.909 13.88 0.00 0.00 4.08
5521 13341 2.634600 AGTGGTTTTACGTGAACTGCA 58.365 42.857 13.88 0.00 0.00 4.41
5522 13342 3.685836 AAGTGGTTTTACGTGAACTGC 57.314 42.857 13.88 8.68 0.00 4.40
5523 13343 5.285134 CACAAAAGTGGTTTTACGTGAACTG 59.715 40.000 13.88 7.68 35.71 3.16
5524 13344 5.395642 CACAAAAGTGGTTTTACGTGAACT 58.604 37.500 13.88 0.00 35.71 3.01
5525 13345 4.559643 CCACAAAAGTGGTTTTACGTGAAC 59.440 41.667 6.49 2.98 39.56 3.18
5526 13346 4.380655 CCCACAAAAGTGGTTTTACGTGAA 60.381 41.667 13.11 0.00 42.75 3.18
5527 13347 3.128938 CCCACAAAAGTGGTTTTACGTGA 59.871 43.478 13.11 0.00 42.75 4.35
5528 13348 3.440228 CCCACAAAAGTGGTTTTACGTG 58.560 45.455 13.11 0.00 42.75 4.49
5529 13349 2.159212 GCCCACAAAAGTGGTTTTACGT 60.159 45.455 13.11 0.00 42.75 3.57
5530 13350 2.465855 GCCCACAAAAGTGGTTTTACG 58.534 47.619 13.11 0.00 42.75 3.18
5531 13351 2.800273 CGGCCCACAAAAGTGGTTTTAC 60.800 50.000 13.11 0.00 42.75 2.01
5532 13352 1.409427 CGGCCCACAAAAGTGGTTTTA 59.591 47.619 13.11 0.00 42.75 1.52
5533 13353 0.176910 CGGCCCACAAAAGTGGTTTT 59.823 50.000 13.11 0.00 42.75 2.43
5534 13354 0.684805 TCGGCCCACAAAAGTGGTTT 60.685 50.000 13.11 0.00 42.75 3.27
5535 13355 1.076632 TCGGCCCACAAAAGTGGTT 60.077 52.632 13.11 0.00 42.75 3.67
5536 13356 1.826487 GTCGGCCCACAAAAGTGGT 60.826 57.895 13.11 0.00 42.75 4.16
5537 13357 2.903547 CGTCGGCCCACAAAAGTGG 61.904 63.158 7.66 7.66 43.86 4.00
5538 13358 2.637025 CGTCGGCCCACAAAAGTG 59.363 61.111 0.16 0.00 0.00 3.16
5539 13359 3.284449 GCGTCGGCCCACAAAAGT 61.284 61.111 0.16 0.00 0.00 2.66
5540 13360 4.383602 CGCGTCGGCCCACAAAAG 62.384 66.667 0.16 0.00 35.02 2.27
5564 13384 2.821366 GCGGGGTCTGCATCTGTG 60.821 66.667 0.00 0.00 0.00 3.66
5565 13385 3.321648 TGCGGGGTCTGCATCTGT 61.322 61.111 0.00 0.00 37.44 3.41
5571 13391 0.250901 ATCCATTATGCGGGGTCTGC 60.251 55.000 0.00 0.00 0.00 4.26
5572 13392 1.611673 GGATCCATTATGCGGGGTCTG 60.612 57.143 6.95 0.00 34.61 3.51
5573 13393 0.693049 GGATCCATTATGCGGGGTCT 59.307 55.000 6.95 0.00 34.61 3.85
5574 13394 0.673644 CGGATCCATTATGCGGGGTC 60.674 60.000 13.41 0.00 44.85 4.46
5575 13395 1.374947 CGGATCCATTATGCGGGGT 59.625 57.895 13.41 0.00 44.85 4.95
5576 13396 4.301505 CGGATCCATTATGCGGGG 57.698 61.111 13.41 0.00 44.85 5.73
5622 13442 1.515081 CAGAAGCCGACCCGTAAAAA 58.485 50.000 0.00 0.00 0.00 1.94
5623 13443 0.952010 GCAGAAGCCGACCCGTAAAA 60.952 55.000 0.00 0.00 33.58 1.52
5624 13444 1.375013 GCAGAAGCCGACCCGTAAA 60.375 57.895 0.00 0.00 33.58 2.01
5625 13445 2.263540 GCAGAAGCCGACCCGTAA 59.736 61.111 0.00 0.00 33.58 3.18
5626 13446 4.124351 CGCAGAAGCCGACCCGTA 62.124 66.667 0.00 0.00 37.52 4.02
5629 13449 3.591254 AACTCGCAGAAGCCGACCC 62.591 63.158 0.00 0.00 37.52 4.46
5630 13450 1.228657 AAAACTCGCAGAAGCCGACC 61.229 55.000 0.00 0.00 37.52 4.79
5631 13451 0.110644 CAAAACTCGCAGAAGCCGAC 60.111 55.000 0.00 0.00 37.52 4.79
5632 13452 0.249699 TCAAAACTCGCAGAAGCCGA 60.250 50.000 0.00 0.00 37.52 5.54
5633 13453 0.798776 ATCAAAACTCGCAGAAGCCG 59.201 50.000 0.00 0.00 37.52 5.52
5634 13454 2.079925 AGATCAAAACTCGCAGAAGCC 58.920 47.619 0.00 0.00 37.52 4.35
5635 13455 2.159599 CCAGATCAAAACTCGCAGAAGC 60.160 50.000 0.00 0.00 34.09 3.86
5636 13456 2.159599 GCCAGATCAAAACTCGCAGAAG 60.160 50.000 0.00 0.00 34.09 2.85
5637 13457 1.806542 GCCAGATCAAAACTCGCAGAA 59.193 47.619 0.00 0.00 34.09 3.02
5638 13458 1.442769 GCCAGATCAAAACTCGCAGA 58.557 50.000 0.00 0.00 0.00 4.26
5639 13459 0.095935 CGCCAGATCAAAACTCGCAG 59.904 55.000 0.00 0.00 0.00 5.18
5640 13460 1.911293 GCGCCAGATCAAAACTCGCA 61.911 55.000 0.00 0.00 40.63 5.10
5641 13461 1.226128 GCGCCAGATCAAAACTCGC 60.226 57.895 0.00 0.00 0.00 5.03
5642 13462 0.095935 CTGCGCCAGATCAAAACTCG 59.904 55.000 4.18 0.00 32.44 4.18
5643 13463 0.179179 GCTGCGCCAGATCAAAACTC 60.179 55.000 4.18 0.00 32.44 3.01
5644 13464 0.607489 AGCTGCGCCAGATCAAAACT 60.607 50.000 4.18 0.00 32.44 2.66
5645 13465 0.179179 GAGCTGCGCCAGATCAAAAC 60.179 55.000 16.58 0.00 44.99 2.43
5646 13466 1.638388 CGAGCTGCGCCAGATCAAAA 61.638 55.000 19.77 0.00 45.80 2.44
5647 13467 2.102438 CGAGCTGCGCCAGATCAAA 61.102 57.895 19.77 0.00 45.80 2.69
5648 13468 2.510012 CGAGCTGCGCCAGATCAA 60.510 61.111 19.77 0.00 45.80 2.57
5649 13469 3.706563 GACGAGCTGCGCCAGATCA 62.707 63.158 19.77 0.00 45.80 2.92
5650 13470 2.959071 GACGAGCTGCGCCAGATC 60.959 66.667 4.18 9.97 46.04 2.75
5651 13471 4.521062 GGACGAGCTGCGCCAGAT 62.521 66.667 4.18 0.07 46.04 2.90
5660 13480 4.753662 TACGGGCTGGGACGAGCT 62.754 66.667 6.29 0.00 39.11 4.09
5661 13481 2.791501 TTTTACGGGCTGGGACGAGC 62.792 60.000 0.00 0.00 38.34 5.03
5662 13482 1.017701 GTTTTACGGGCTGGGACGAG 61.018 60.000 0.00 0.00 0.00 4.18
5663 13483 1.004679 GTTTTACGGGCTGGGACGA 60.005 57.895 0.00 0.00 0.00 4.20
5664 13484 0.604511 AAGTTTTACGGGCTGGGACG 60.605 55.000 0.00 0.00 0.00 4.79
5665 13485 2.477845 TAAGTTTTACGGGCTGGGAC 57.522 50.000 0.00 0.00 0.00 4.46
5666 13486 3.505480 TTTAAGTTTTACGGGCTGGGA 57.495 42.857 0.00 0.00 0.00 4.37
5667 13487 4.218852 TCAATTTAAGTTTTACGGGCTGGG 59.781 41.667 0.00 0.00 0.00 4.45
5668 13488 5.379732 TCAATTTAAGTTTTACGGGCTGG 57.620 39.130 0.00 0.00 0.00 4.85
5669 13489 6.852664 AGATCAATTTAAGTTTTACGGGCTG 58.147 36.000 0.00 0.00 0.00 4.85
5670 13490 8.747538 ATAGATCAATTTAAGTTTTACGGGCT 57.252 30.769 0.00 0.00 0.00 5.19
5671 13491 8.837389 AGATAGATCAATTTAAGTTTTACGGGC 58.163 33.333 0.00 0.00 0.00 6.13
5687 13507 9.740239 GCAAATGAAAGCATTAAGATAGATCAA 57.260 29.630 0.00 0.00 43.71 2.57
5688 13508 9.128404 AGCAAATGAAAGCATTAAGATAGATCA 57.872 29.630 0.00 0.00 43.71 2.92
5689 13509 9.962783 AAGCAAATGAAAGCATTAAGATAGATC 57.037 29.630 0.00 0.00 43.71 2.75
5693 13513 8.658609 GCAAAAGCAAATGAAAGCATTAAGATA 58.341 29.630 0.00 0.00 43.71 1.98
5694 13514 7.173562 TGCAAAAGCAAATGAAAGCATTAAGAT 59.826 29.630 0.00 0.00 43.71 2.40
5695 13515 6.482641 TGCAAAAGCAAATGAAAGCATTAAGA 59.517 30.769 0.00 0.00 43.71 2.10
5696 13516 6.660722 TGCAAAAGCAAATGAAAGCATTAAG 58.339 32.000 0.00 0.00 43.71 1.85
5697 13517 6.615264 TGCAAAAGCAAATGAAAGCATTAA 57.385 29.167 0.00 0.00 43.71 1.40
5698 13518 6.037940 TGTTGCAAAAGCAAATGAAAGCATTA 59.962 30.769 0.00 0.00 43.71 1.90
5699 13519 5.163642 TGTTGCAAAAGCAAATGAAAGCATT 60.164 32.000 0.00 0.00 46.35 3.56
5700 13520 4.335874 TGTTGCAAAAGCAAATGAAAGCAT 59.664 33.333 0.00 0.00 35.92 3.79
5701 13521 3.688185 TGTTGCAAAAGCAAATGAAAGCA 59.312 34.783 0.00 0.00 0.00 3.91
5702 13522 4.275838 TGTTGCAAAAGCAAATGAAAGC 57.724 36.364 0.00 0.00 0.00 3.51
5703 13523 5.629097 TGTTGTTGCAAAAGCAAATGAAAG 58.371 33.333 3.32 0.00 0.00 2.62
5704 13524 5.618056 TGTTGTTGCAAAAGCAAATGAAA 57.382 30.435 3.32 0.00 0.00 2.69
5705 13525 5.814764 ATGTTGTTGCAAAAGCAAATGAA 57.185 30.435 10.43 0.00 0.00 2.57
5706 13526 5.814764 AATGTTGTTGCAAAAGCAAATGA 57.185 30.435 10.43 0.00 0.00 2.57
5707 13527 7.966157 TTTAATGTTGTTGCAAAAGCAAATG 57.034 28.000 10.43 0.00 0.00 2.32
5740 13560 9.883142 GCTATTCTAGCCAAGATTTAGTGATAT 57.117 33.333 0.00 0.00 45.95 1.63
5757 13577 9.528018 TTGTTTTCTTTGGTTTTGCTATTCTAG 57.472 29.630 0.00 0.00 0.00 2.43
5758 13578 9.528018 CTTGTTTTCTTTGGTTTTGCTATTCTA 57.472 29.630 0.00 0.00 0.00 2.10
5759 13579 8.257306 TCTTGTTTTCTTTGGTTTTGCTATTCT 58.743 29.630 0.00 0.00 0.00 2.40
5760 13580 8.419076 TCTTGTTTTCTTTGGTTTTGCTATTC 57.581 30.769 0.00 0.00 0.00 1.75
5761 13581 8.664798 GTTCTTGTTTTCTTTGGTTTTGCTATT 58.335 29.630 0.00 0.00 0.00 1.73
5762 13582 7.279981 GGTTCTTGTTTTCTTTGGTTTTGCTAT 59.720 33.333 0.00 0.00 0.00 2.97
5763 13583 6.592220 GGTTCTTGTTTTCTTTGGTTTTGCTA 59.408 34.615 0.00 0.00 0.00 3.49
5764 13584 5.411361 GGTTCTTGTTTTCTTTGGTTTTGCT 59.589 36.000 0.00 0.00 0.00 3.91
5765 13585 5.180304 TGGTTCTTGTTTTCTTTGGTTTTGC 59.820 36.000 0.00 0.00 0.00 3.68
5766 13586 6.203723 TGTGGTTCTTGTTTTCTTTGGTTTTG 59.796 34.615 0.00 0.00 0.00 2.44
5767 13587 6.292150 TGTGGTTCTTGTTTTCTTTGGTTTT 58.708 32.000 0.00 0.00 0.00 2.43
5768 13588 5.859495 TGTGGTTCTTGTTTTCTTTGGTTT 58.141 33.333 0.00 0.00 0.00 3.27
5769 13589 5.476091 TGTGGTTCTTGTTTTCTTTGGTT 57.524 34.783 0.00 0.00 0.00 3.67
5770 13590 5.245075 TCTTGTGGTTCTTGTTTTCTTTGGT 59.755 36.000 0.00 0.00 0.00 3.67
5771 13591 5.719173 TCTTGTGGTTCTTGTTTTCTTTGG 58.281 37.500 0.00 0.00 0.00 3.28
5772 13592 7.674705 GCATTCTTGTGGTTCTTGTTTTCTTTG 60.675 37.037 0.00 0.00 0.00 2.77
5773 13593 6.313658 GCATTCTTGTGGTTCTTGTTTTCTTT 59.686 34.615 0.00 0.00 0.00 2.52
5774 13594 5.812127 GCATTCTTGTGGTTCTTGTTTTCTT 59.188 36.000 0.00 0.00 0.00 2.52
5775 13595 5.105392 TGCATTCTTGTGGTTCTTGTTTTCT 60.105 36.000 0.00 0.00 0.00 2.52
5776 13596 5.108517 TGCATTCTTGTGGTTCTTGTTTTC 58.891 37.500 0.00 0.00 0.00 2.29
5777 13597 5.083533 TGCATTCTTGTGGTTCTTGTTTT 57.916 34.783 0.00 0.00 0.00 2.43
5778 13598 4.734398 TGCATTCTTGTGGTTCTTGTTT 57.266 36.364 0.00 0.00 0.00 2.83
5779 13599 4.942761 ATGCATTCTTGTGGTTCTTGTT 57.057 36.364 0.00 0.00 0.00 2.83
5780 13600 4.942761 AATGCATTCTTGTGGTTCTTGT 57.057 36.364 5.99 0.00 0.00 3.16
5781 13601 5.291178 TGAAATGCATTCTTGTGGTTCTTG 58.709 37.500 13.38 0.00 38.92 3.02
5782 13602 5.302568 TCTGAAATGCATTCTTGTGGTTCTT 59.697 36.000 13.38 0.00 38.92 2.52
5783 13603 4.828939 TCTGAAATGCATTCTTGTGGTTCT 59.171 37.500 13.38 0.00 38.92 3.01
5784 13604 5.125100 TCTGAAATGCATTCTTGTGGTTC 57.875 39.130 13.38 4.48 38.92 3.62
5785 13605 5.302568 TCTTCTGAAATGCATTCTTGTGGTT 59.697 36.000 13.38 0.00 38.92 3.67
5786 13606 4.828939 TCTTCTGAAATGCATTCTTGTGGT 59.171 37.500 13.38 0.00 38.92 4.16
5787 13607 5.381174 TCTTCTGAAATGCATTCTTGTGG 57.619 39.130 13.38 3.01 38.92 4.17
5788 13608 7.063074 GGAAATCTTCTGAAATGCATTCTTGTG 59.937 37.037 13.38 2.49 38.92 3.33
5789 13609 7.095270 GGAAATCTTCTGAAATGCATTCTTGT 58.905 34.615 13.38 0.00 38.92 3.16
5790 13610 7.094631 TGGAAATCTTCTGAAATGCATTCTTG 58.905 34.615 13.38 5.84 38.92 3.02
5791 13611 7.235935 TGGAAATCTTCTGAAATGCATTCTT 57.764 32.000 13.38 0.00 38.92 2.52
5792 13612 6.845758 TGGAAATCTTCTGAAATGCATTCT 57.154 33.333 13.38 3.05 38.92 2.40
5793 13613 7.095270 AGTTGGAAATCTTCTGAAATGCATTC 58.905 34.615 13.38 7.13 38.60 2.67
5794 13614 7.001099 AGTTGGAAATCTTCTGAAATGCATT 57.999 32.000 5.99 5.99 0.00 3.56
5795 13615 6.600882 AGTTGGAAATCTTCTGAAATGCAT 57.399 33.333 0.00 0.00 0.00 3.96
5796 13616 6.409524 AAGTTGGAAATCTTCTGAAATGCA 57.590 33.333 0.00 0.00 0.00 3.96
5797 13617 5.866092 GGAAGTTGGAAATCTTCTGAAATGC 59.134 40.000 0.00 0.00 39.67 3.56
5798 13618 6.985117 TGGAAGTTGGAAATCTTCTGAAATG 58.015 36.000 0.00 0.00 39.67 2.32
5799 13619 7.787623 ATGGAAGTTGGAAATCTTCTGAAAT 57.212 32.000 0.00 0.00 39.67 2.17
5800 13620 8.576442 GTTATGGAAGTTGGAAATCTTCTGAAA 58.424 33.333 0.00 0.00 39.67 2.69
5801 13621 7.944554 AGTTATGGAAGTTGGAAATCTTCTGAA 59.055 33.333 0.00 0.00 39.67 3.02
5802 13622 7.391554 CAGTTATGGAAGTTGGAAATCTTCTGA 59.608 37.037 0.00 0.00 39.67 3.27
5803 13623 7.533426 CAGTTATGGAAGTTGGAAATCTTCTG 58.467 38.462 0.00 0.00 39.67 3.02
5804 13624 6.151817 GCAGTTATGGAAGTTGGAAATCTTCT 59.848 38.462 0.00 0.00 39.67 2.85
5805 13625 6.151817 AGCAGTTATGGAAGTTGGAAATCTTC 59.848 38.462 0.00 0.00 39.21 2.87
5806 13626 6.012745 AGCAGTTATGGAAGTTGGAAATCTT 58.987 36.000 0.00 0.00 0.00 2.40
5807 13627 5.574188 AGCAGTTATGGAAGTTGGAAATCT 58.426 37.500 0.00 0.00 0.00 2.40
5808 13628 5.163612 GGAGCAGTTATGGAAGTTGGAAATC 60.164 44.000 0.00 0.00 0.00 2.17
5809 13629 4.706962 GGAGCAGTTATGGAAGTTGGAAAT 59.293 41.667 0.00 0.00 0.00 2.17
5810 13630 4.079253 GGAGCAGTTATGGAAGTTGGAAA 58.921 43.478 0.00 0.00 0.00 3.13
5811 13631 3.561313 GGGAGCAGTTATGGAAGTTGGAA 60.561 47.826 0.00 0.00 0.00 3.53
5812 13632 2.026262 GGGAGCAGTTATGGAAGTTGGA 60.026 50.000 0.00 0.00 0.00 3.53
5813 13633 2.290896 TGGGAGCAGTTATGGAAGTTGG 60.291 50.000 0.00 0.00 0.00 3.77
5814 13634 2.749621 GTGGGAGCAGTTATGGAAGTTG 59.250 50.000 0.00 0.00 0.00 3.16
5815 13635 2.644798 AGTGGGAGCAGTTATGGAAGTT 59.355 45.455 0.00 0.00 0.00 2.66
5816 13636 2.269940 AGTGGGAGCAGTTATGGAAGT 58.730 47.619 0.00 0.00 0.00 3.01
5817 13637 3.452627 ACTAGTGGGAGCAGTTATGGAAG 59.547 47.826 0.00 0.00 0.00 3.46
5818 13638 3.450904 ACTAGTGGGAGCAGTTATGGAA 58.549 45.455 0.00 0.00 0.00 3.53
5819 13639 3.116096 ACTAGTGGGAGCAGTTATGGA 57.884 47.619 0.00 0.00 0.00 3.41
5820 13640 3.197766 TCAACTAGTGGGAGCAGTTATGG 59.802 47.826 0.00 0.00 31.46 2.74
5821 13641 4.471904 TCAACTAGTGGGAGCAGTTATG 57.528 45.455 0.00 0.00 31.46 1.90
5822 13642 4.624125 GCTTCAACTAGTGGGAGCAGTTAT 60.624 45.833 23.78 0.00 37.02 1.89
5823 13643 3.306780 GCTTCAACTAGTGGGAGCAGTTA 60.307 47.826 23.78 0.00 37.02 2.24
5824 13644 2.551071 GCTTCAACTAGTGGGAGCAGTT 60.551 50.000 23.78 0.00 37.02 3.16
5825 13645 1.002544 GCTTCAACTAGTGGGAGCAGT 59.997 52.381 23.78 0.00 37.02 4.40
5826 13646 1.002430 TGCTTCAACTAGTGGGAGCAG 59.998 52.381 26.91 9.89 39.97 4.24
5827 13647 1.055849 TGCTTCAACTAGTGGGAGCA 58.944 50.000 26.91 26.91 41.47 4.26
5828 13648 2.185004 TTGCTTCAACTAGTGGGAGC 57.815 50.000 22.23 22.23 37.34 4.70
5829 13649 5.923204 AGATATTGCTTCAACTAGTGGGAG 58.077 41.667 0.43 0.43 0.00 4.30
5830 13650 5.957771 AGATATTGCTTCAACTAGTGGGA 57.042 39.130 0.00 0.00 0.00 4.37
5831 13651 7.396540 AAAAGATATTGCTTCAACTAGTGGG 57.603 36.000 0.00 0.00 0.00 4.61
5832 13652 8.514594 TGAAAAAGATATTGCTTCAACTAGTGG 58.485 33.333 0.00 0.00 0.00 4.00
5835 13655 9.017669 GCATGAAAAAGATATTGCTTCAACTAG 57.982 33.333 0.00 0.00 30.37 2.57
5836 13656 8.522003 TGCATGAAAAAGATATTGCTTCAACTA 58.478 29.630 0.00 0.00 30.37 2.24
5837 13657 7.380536 TGCATGAAAAAGATATTGCTTCAACT 58.619 30.769 0.00 0.00 30.37 3.16
5838 13658 7.585286 TGCATGAAAAAGATATTGCTTCAAC 57.415 32.000 0.00 0.78 30.37 3.18
5839 13659 8.255206 AGATGCATGAAAAAGATATTGCTTCAA 58.745 29.630 2.46 0.00 30.37 2.69
5840 13660 7.778083 AGATGCATGAAAAAGATATTGCTTCA 58.222 30.769 2.46 1.60 0.00 3.02
5841 13661 9.909644 ATAGATGCATGAAAAAGATATTGCTTC 57.090 29.630 2.46 0.00 0.00 3.86
5843 13663 9.692749 CAATAGATGCATGAAAAAGATATTGCT 57.307 29.630 2.46 0.00 0.00 3.91
5844 13664 9.472361 ACAATAGATGCATGAAAAAGATATTGC 57.528 29.630 2.46 0.00 33.49 3.56
5849 13669 9.745880 GATCAACAATAGATGCATGAAAAAGAT 57.254 29.630 2.46 0.00 33.47 2.40
5850 13670 8.963725 AGATCAACAATAGATGCATGAAAAAGA 58.036 29.630 2.46 0.00 33.47 2.52
5851 13671 9.020813 CAGATCAACAATAGATGCATGAAAAAG 57.979 33.333 2.46 0.00 33.47 2.27
5852 13672 8.525316 ACAGATCAACAATAGATGCATGAAAAA 58.475 29.630 2.46 0.00 33.47 1.94
5853 13673 7.971722 CACAGATCAACAATAGATGCATGAAAA 59.028 33.333 2.46 0.00 33.47 2.29
5854 13674 7.415877 CCACAGATCAACAATAGATGCATGAAA 60.416 37.037 2.46 0.00 33.47 2.69
5855 13675 6.038936 CCACAGATCAACAATAGATGCATGAA 59.961 38.462 2.46 0.00 33.47 2.57
5856 13676 5.529800 CCACAGATCAACAATAGATGCATGA 59.470 40.000 2.46 0.00 34.04 3.07
5857 13677 5.529800 TCCACAGATCAACAATAGATGCATG 59.470 40.000 2.46 0.00 0.00 4.06
5858 13678 5.687780 TCCACAGATCAACAATAGATGCAT 58.312 37.500 0.00 0.00 0.00 3.96
5859 13679 5.101648 TCCACAGATCAACAATAGATGCA 57.898 39.130 0.00 0.00 0.00 3.96
5860 13680 6.485984 AGAATCCACAGATCAACAATAGATGC 59.514 38.462 0.00 0.00 0.00 3.91
5861 13681 8.343366 CAAGAATCCACAGATCAACAATAGATG 58.657 37.037 0.00 0.00 0.00 2.90
5862 13682 8.270030 TCAAGAATCCACAGATCAACAATAGAT 58.730 33.333 0.00 0.00 0.00 1.98
5863 13683 7.623630 TCAAGAATCCACAGATCAACAATAGA 58.376 34.615 0.00 0.00 0.00 1.98
5864 13684 7.854557 TCAAGAATCCACAGATCAACAATAG 57.145 36.000 0.00 0.00 0.00 1.73
5865 13685 8.270030 AGATCAAGAATCCACAGATCAACAATA 58.730 33.333 0.00 0.00 38.00 1.90
5866 13686 7.117397 AGATCAAGAATCCACAGATCAACAAT 58.883 34.615 0.00 0.00 38.00 2.71
5867 13687 6.479006 AGATCAAGAATCCACAGATCAACAA 58.521 36.000 0.00 0.00 38.00 2.83
5868 13688 6.058553 AGATCAAGAATCCACAGATCAACA 57.941 37.500 0.00 0.00 38.00 3.33
5869 13689 6.373774 ACAAGATCAAGAATCCACAGATCAAC 59.626 38.462 0.00 0.00 38.00 3.18
5870 13690 6.479006 ACAAGATCAAGAATCCACAGATCAA 58.521 36.000 0.00 0.00 38.00 2.57
5871 13691 6.058553 ACAAGATCAAGAATCCACAGATCA 57.941 37.500 0.00 0.00 38.00 2.92
5872 13692 6.998968 AACAAGATCAAGAATCCACAGATC 57.001 37.500 0.00 0.00 34.67 2.75
5873 13693 7.232127 ACAAAACAAGATCAAGAATCCACAGAT 59.768 33.333 0.00 0.00 34.67 2.90
5874 13694 6.547141 ACAAAACAAGATCAAGAATCCACAGA 59.453 34.615 0.00 0.00 34.67 3.41
5875 13695 6.742109 ACAAAACAAGATCAAGAATCCACAG 58.258 36.000 0.00 0.00 34.67 3.66
5876 13696 6.713762 ACAAAACAAGATCAAGAATCCACA 57.286 33.333 0.00 0.00 34.67 4.17
5877 13697 9.696917 ATTAACAAAACAAGATCAAGAATCCAC 57.303 29.630 0.00 0.00 34.67 4.02
5886 13706 9.195411 GCATCAAGAATTAACAAAACAAGATCA 57.805 29.630 0.00 0.00 0.00 2.92
5887 13707 9.415544 AGCATCAAGAATTAACAAAACAAGATC 57.584 29.630 0.00 0.00 0.00 2.75
5888 13708 9.768662 AAGCATCAAGAATTAACAAAACAAGAT 57.231 25.926 0.00 0.00 0.00 2.40
5889 13709 9.598517 AAAGCATCAAGAATTAACAAAACAAGA 57.401 25.926 0.00 0.00 0.00 3.02
5890 13710 9.853921 GAAAGCATCAAGAATTAACAAAACAAG 57.146 29.630 0.00 0.00 0.00 3.16
5891 13711 9.598517 AGAAAGCATCAAGAATTAACAAAACAA 57.401 25.926 0.00 0.00 0.00 2.83
5892 13712 9.598517 AAGAAAGCATCAAGAATTAACAAAACA 57.401 25.926 0.00 0.00 0.00 2.83
5894 13714 9.814899 TGAAGAAAGCATCAAGAATTAACAAAA 57.185 25.926 0.00 0.00 0.00 2.44
5895 13715 9.985730 ATGAAGAAAGCATCAAGAATTAACAAA 57.014 25.926 0.00 0.00 0.00 2.83
5896 13716 9.985730 AATGAAGAAAGCATCAAGAATTAACAA 57.014 25.926 0.00 0.00 0.00 2.83
5897 13717 9.630098 GAATGAAGAAAGCATCAAGAATTAACA 57.370 29.630 0.00 0.00 0.00 2.41
5898 13718 9.852091 AGAATGAAGAAAGCATCAAGAATTAAC 57.148 29.630 0.00 0.00 0.00 2.01
5901 13721 8.582437 TGAAGAATGAAGAAAGCATCAAGAATT 58.418 29.630 0.00 0.00 0.00 2.17
5902 13722 8.118976 TGAAGAATGAAGAAAGCATCAAGAAT 57.881 30.769 0.00 0.00 0.00 2.40
5903 13723 7.514784 TGAAGAATGAAGAAAGCATCAAGAA 57.485 32.000 0.00 0.00 0.00 2.52
5904 13724 7.610692 AGATGAAGAATGAAGAAAGCATCAAGA 59.389 33.333 0.00 0.00 34.80 3.02
5905 13725 7.763356 AGATGAAGAATGAAGAAAGCATCAAG 58.237 34.615 0.00 0.00 34.80 3.02
5906 13726 7.698506 AGATGAAGAATGAAGAAAGCATCAA 57.301 32.000 0.00 0.00 34.80 2.57
5907 13727 7.698506 AAGATGAAGAATGAAGAAAGCATCA 57.301 32.000 0.00 0.00 34.80 3.07
5908 13728 7.488471 CCAAAGATGAAGAATGAAGAAAGCATC 59.512 37.037 0.00 0.00 33.08 3.91
5909 13729 7.039223 ACCAAAGATGAAGAATGAAGAAAGCAT 60.039 33.333 0.00 0.00 0.00 3.79
5910 13730 6.266103 ACCAAAGATGAAGAATGAAGAAAGCA 59.734 34.615 0.00 0.00 0.00 3.91
5911 13731 6.685657 ACCAAAGATGAAGAATGAAGAAAGC 58.314 36.000 0.00 0.00 0.00 3.51
5912 13732 9.189723 GAAACCAAAGATGAAGAATGAAGAAAG 57.810 33.333 0.00 0.00 0.00 2.62
5913 13733 7.862372 CGAAACCAAAGATGAAGAATGAAGAAA 59.138 33.333 0.00 0.00 0.00 2.52
5914 13734 7.228507 TCGAAACCAAAGATGAAGAATGAAGAA 59.771 33.333 0.00 0.00 0.00 2.52
5915 13735 6.710295 TCGAAACCAAAGATGAAGAATGAAGA 59.290 34.615 0.00 0.00 0.00 2.87
5916 13736 6.902341 TCGAAACCAAAGATGAAGAATGAAG 58.098 36.000 0.00 0.00 0.00 3.02
5917 13737 6.875948 TCGAAACCAAAGATGAAGAATGAA 57.124 33.333 0.00 0.00 0.00 2.57
5918 13738 6.710295 TCTTCGAAACCAAAGATGAAGAATGA 59.290 34.615 0.00 0.00 38.94 2.57
5919 13739 6.902341 TCTTCGAAACCAAAGATGAAGAATG 58.098 36.000 0.00 0.00 38.94 2.67
5920 13740 7.229506 ACTTCTTCGAAACCAAAGATGAAGAAT 59.770 33.333 18.95 4.51 45.78 2.40
5921 13741 6.542370 ACTTCTTCGAAACCAAAGATGAAGAA 59.458 34.615 18.95 12.85 45.18 2.52
5922 13742 6.055588 ACTTCTTCGAAACCAAAGATGAAGA 58.944 36.000 18.95 8.78 43.17 2.87
5923 13743 6.305693 ACTTCTTCGAAACCAAAGATGAAG 57.694 37.500 13.36 13.36 44.61 3.02
5924 13744 6.317642 TCAACTTCTTCGAAACCAAAGATGAA 59.682 34.615 14.29 5.59 33.32 2.57
5925 13745 5.820423 TCAACTTCTTCGAAACCAAAGATGA 59.180 36.000 13.37 13.37 33.32 2.92
5926 13746 5.909610 GTCAACTTCTTCGAAACCAAAGATG 59.090 40.000 13.17 11.79 34.53 2.90
5927 13747 5.277345 CGTCAACTTCTTCGAAACCAAAGAT 60.277 40.000 13.17 2.74 31.89 2.40
5928 13748 4.033587 CGTCAACTTCTTCGAAACCAAAGA 59.966 41.667 13.17 0.00 0.00 2.52
5929 13749 4.201783 ACGTCAACTTCTTCGAAACCAAAG 60.202 41.667 0.00 3.77 0.00 2.77
5930 13750 3.685756 ACGTCAACTTCTTCGAAACCAAA 59.314 39.130 0.00 0.00 0.00 3.28
5931 13751 3.264104 ACGTCAACTTCTTCGAAACCAA 58.736 40.909 0.00 0.00 0.00 3.67
5932 13752 2.896168 ACGTCAACTTCTTCGAAACCA 58.104 42.857 0.00 0.00 0.00 3.67
5933 13753 3.604392 CAACGTCAACTTCTTCGAAACC 58.396 45.455 0.00 0.00 0.00 3.27
5934 13754 3.027029 GCAACGTCAACTTCTTCGAAAC 58.973 45.455 0.00 0.00 0.00 2.78
5935 13755 2.933906 AGCAACGTCAACTTCTTCGAAA 59.066 40.909 0.00 0.00 0.00 3.46
5936 13756 2.546778 AGCAACGTCAACTTCTTCGAA 58.453 42.857 0.00 0.00 0.00 3.71
5937 13757 2.218953 AGCAACGTCAACTTCTTCGA 57.781 45.000 0.00 0.00 0.00 3.71
5938 13758 2.348591 GGAAGCAACGTCAACTTCTTCG 60.349 50.000 18.76 0.00 39.77 3.79
5939 13759 2.031944 GGGAAGCAACGTCAACTTCTTC 60.032 50.000 18.76 6.89 39.77 2.87
5940 13760 1.947456 GGGAAGCAACGTCAACTTCTT 59.053 47.619 18.76 0.00 39.77 2.52
5941 13761 1.594331 GGGAAGCAACGTCAACTTCT 58.406 50.000 18.76 0.00 39.77 2.85
5942 13762 0.591659 GGGGAAGCAACGTCAACTTC 59.408 55.000 13.78 13.78 39.25 3.01
5943 13763 0.182775 AGGGGAAGCAACGTCAACTT 59.817 50.000 0.00 0.00 0.00 2.66
5944 13764 0.250338 GAGGGGAAGCAACGTCAACT 60.250 55.000 0.00 0.00 0.00 3.16
5945 13765 0.250338 AGAGGGGAAGCAACGTCAAC 60.250 55.000 0.00 0.00 0.00 3.18
5946 13766 1.275291 CTAGAGGGGAAGCAACGTCAA 59.725 52.381 0.00 0.00 0.00 3.18
5947 13767 0.895530 CTAGAGGGGAAGCAACGTCA 59.104 55.000 0.00 0.00 0.00 4.35
5948 13768 0.896226 ACTAGAGGGGAAGCAACGTC 59.104 55.000 0.00 0.00 0.00 4.34
5949 13769 1.002087 CAACTAGAGGGGAAGCAACGT 59.998 52.381 0.00 0.00 0.00 3.99
5950 13770 1.726853 CAACTAGAGGGGAAGCAACG 58.273 55.000 0.00 0.00 0.00 4.10
5951 13771 1.454201 GCAACTAGAGGGGAAGCAAC 58.546 55.000 0.00 0.00 0.00 4.17
5952 13772 3.957288 GCAACTAGAGGGGAAGCAA 57.043 52.632 0.00 0.00 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.