Multiple sequence alignment - TraesCS3B01G343800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G343800 chr3B 100.000 7404 0 0 1 7404 552924903 552932306 0.000000e+00 13673.0
1 TraesCS3B01G343800 chr3A 95.958 5987 143 30 1257 7187 565351808 565357751 0.000000e+00 9624.0
2 TraesCS3B01G343800 chr3A 96.853 2669 61 13 2154 4820 560189712 560187065 0.000000e+00 4442.0
3 TraesCS3B01G343800 chr3A 88.365 997 59 16 279 1224 565350826 565351816 0.000000e+00 1146.0
4 TraesCS3B01G343800 chr3A 94.366 355 11 7 1813 2163 560203076 560202727 3.040000e-148 536.0
5 TraesCS3B01G343800 chr3D 94.646 4968 126 45 421 5311 423859346 423854442 0.000000e+00 7572.0
6 TraesCS3B01G343800 chr3D 96.306 1543 46 4 5309 6840 423854307 423852765 0.000000e+00 2523.0
7 TraesCS3B01G343800 chr7B 79.398 432 67 11 6810 7222 206345930 206346358 1.220000e-72 285.0
8 TraesCS3B01G343800 chr7B 84.153 183 20 8 7228 7404 14912402 14912581 1.280000e-37 169.0
9 TraesCS3B01G343800 chr6A 80.149 403 55 11 6818 7200 55034767 55035164 2.030000e-70 278.0
10 TraesCS3B01G343800 chr6A 88.506 174 16 3 6811 6982 481078623 481078794 2.710000e-49 207.0
11 TraesCS3B01G343800 chr6A 80.603 232 34 10 87 313 588043470 588043695 1.280000e-37 169.0
12 TraesCS3B01G343800 chr4B 81.919 271 37 10 91 355 466691017 466691281 1.250000e-52 219.0
13 TraesCS3B01G343800 chr4B 87.879 165 17 3 6817 6979 105703612 105703449 2.730000e-44 191.0
14 TraesCS3B01G343800 chr4B 94.595 37 2 0 31 67 574228575 574228539 2.890000e-04 58.4
15 TraesCS3B01G343800 chr4A 88.485 165 15 3 6817 6979 514566244 514566406 5.860000e-46 196.0
16 TraesCS3B01G343800 chr4A 85.789 190 18 9 169 355 84944637 84944454 7.580000e-45 193.0
17 TraesCS3B01G343800 chr7D 84.158 202 27 5 158 357 603341293 603341095 2.730000e-44 191.0
18 TraesCS3B01G343800 chr7D 83.784 185 19 9 7226 7404 598011954 598011775 1.650000e-36 165.0
19 TraesCS3B01G343800 chr2A 86.286 175 18 6 193 364 459472896 459473067 1.270000e-42 185.0
20 TraesCS3B01G343800 chr2A 85.714 175 18 7 193 364 459364962 459365132 2.120000e-40 178.0
21 TraesCS3B01G343800 chr2A 80.000 185 24 11 7228 7404 777899580 777899401 2.800000e-24 124.0
22 TraesCS3B01G343800 chr6B 81.498 227 33 8 133 354 438385138 438385360 2.120000e-40 178.0
23 TraesCS3B01G343800 chr1D 79.061 277 43 13 87 358 19975958 19975692 7.630000e-40 176.0
24 TraesCS3B01G343800 chr1D 84.459 148 15 6 7228 7370 23423379 23423235 1.000000e-28 139.0
25 TraesCS3B01G343800 chr1A 82.673 202 25 8 157 355 571292494 571292300 3.550000e-38 171.0
26 TraesCS3B01G343800 chr1A 83.221 149 16 6 7228 7370 24813146 24813291 2.170000e-25 128.0
27 TraesCS3B01G343800 chr4D 87.500 112 11 3 6817 6926 72670135 72670025 7.800000e-25 126.0
28 TraesCS3B01G343800 chr5A 88.172 93 5 5 7313 7404 632368842 632368755 1.020000e-18 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G343800 chr3B 552924903 552932306 7403 False 13673.0 13673 100.0000 1 7404 1 chr3B.!!$F1 7403
1 TraesCS3B01G343800 chr3A 565350826 565357751 6925 False 5385.0 9624 92.1615 279 7187 2 chr3A.!!$F1 6908
2 TraesCS3B01G343800 chr3A 560187065 560189712 2647 True 4442.0 4442 96.8530 2154 4820 1 chr3A.!!$R1 2666
3 TraesCS3B01G343800 chr3D 423852765 423859346 6581 True 5047.5 7572 95.4760 421 6840 2 chr3D.!!$R1 6419

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
272 273 0.097325 GAGAGTGACAGCGTACTCGG 59.903 60.000 0.0 0.0 46.05 4.63 F
1953 2078 0.178950 TCTGAGCTGGTGTGGTCTCT 60.179 55.000 0.0 0.0 35.68 3.10 F
3268 3406 3.807553 TCTTGTCAAATGTCAGTCAGCA 58.192 40.909 0.0 0.0 0.00 4.41 F
3931 4069 0.539438 TTGATGTGGCTGTTGGGACC 60.539 55.000 0.0 0.0 0.00 4.46 F
5155 5295 0.398696 TATGTGGGTTTGGTGCTCGT 59.601 50.000 0.0 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2075 2212 0.392461 TTATCACCACTCTTGCCGCC 60.392 55.000 0.0 0.0 0.00 6.13 R
3850 3988 1.176527 TGCTACCATTCAAAGCCAGC 58.823 50.000 0.0 0.0 35.33 4.85 R
5137 5277 0.467290 AACGAGCACCAAACCCACAT 60.467 50.000 0.0 0.0 0.00 3.21 R
5571 5851 2.778299 AGTGTGCATTATTGGTGACGT 58.222 42.857 0.0 0.0 0.00 4.34 R
6927 7225 0.112995 AGCCAAGCAAACCCAGATCA 59.887 50.000 0.0 0.0 0.00 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.025015 GCTTATGTTGCAGAAGTCCATG 57.975 45.455 5.58 0.00 35.43 3.66
22 23 3.691118 GCTTATGTTGCAGAAGTCCATGA 59.309 43.478 0.00 0.00 35.43 3.07
23 24 4.201891 GCTTATGTTGCAGAAGTCCATGAG 60.202 45.833 0.00 0.00 35.43 2.90
24 25 3.708403 ATGTTGCAGAAGTCCATGAGA 57.292 42.857 0.00 0.00 0.00 3.27
25 26 3.049708 TGTTGCAGAAGTCCATGAGAG 57.950 47.619 0.00 0.00 0.00 3.20
26 27 2.369860 TGTTGCAGAAGTCCATGAGAGT 59.630 45.455 0.00 0.00 0.00 3.24
27 28 3.578282 TGTTGCAGAAGTCCATGAGAGTA 59.422 43.478 0.00 0.00 0.00 2.59
28 29 3.876274 TGCAGAAGTCCATGAGAGTAC 57.124 47.619 0.00 0.00 0.00 2.73
29 30 2.164422 TGCAGAAGTCCATGAGAGTACG 59.836 50.000 0.00 0.00 0.00 3.67
30 31 2.423892 GCAGAAGTCCATGAGAGTACGA 59.576 50.000 0.00 0.00 0.00 3.43
31 32 3.119459 GCAGAAGTCCATGAGAGTACGAA 60.119 47.826 0.00 0.00 0.00 3.85
32 33 4.618460 GCAGAAGTCCATGAGAGTACGAAA 60.618 45.833 0.00 0.00 0.00 3.46
33 34 5.470368 CAGAAGTCCATGAGAGTACGAAAA 58.530 41.667 0.00 0.00 0.00 2.29
34 35 5.346281 CAGAAGTCCATGAGAGTACGAAAAC 59.654 44.000 0.00 0.00 0.00 2.43
35 36 5.244178 AGAAGTCCATGAGAGTACGAAAACT 59.756 40.000 0.00 0.00 0.00 2.66
36 37 4.810790 AGTCCATGAGAGTACGAAAACTG 58.189 43.478 0.00 0.00 0.00 3.16
37 38 3.368236 GTCCATGAGAGTACGAAAACTGC 59.632 47.826 0.00 0.00 0.00 4.40
38 39 3.006430 TCCATGAGAGTACGAAAACTGCA 59.994 43.478 0.00 0.00 0.00 4.41
39 40 3.745975 CCATGAGAGTACGAAAACTGCAA 59.254 43.478 0.00 0.00 0.00 4.08
40 41 4.377431 CCATGAGAGTACGAAAACTGCAAC 60.377 45.833 0.00 0.00 0.00 4.17
41 42 3.787785 TGAGAGTACGAAAACTGCAACA 58.212 40.909 0.00 0.00 0.00 3.33
42 43 3.554324 TGAGAGTACGAAAACTGCAACAC 59.446 43.478 0.00 0.00 0.00 3.32
43 44 3.527533 AGAGTACGAAAACTGCAACACA 58.472 40.909 0.00 0.00 0.00 3.72
44 45 3.936453 AGAGTACGAAAACTGCAACACAA 59.064 39.130 0.00 0.00 0.00 3.33
45 46 4.574828 AGAGTACGAAAACTGCAACACAAT 59.425 37.500 0.00 0.00 0.00 2.71
46 47 4.844267 AGTACGAAAACTGCAACACAATC 58.156 39.130 0.00 0.00 0.00 2.67
47 48 4.574828 AGTACGAAAACTGCAACACAATCT 59.425 37.500 0.00 0.00 0.00 2.40
48 49 4.370364 ACGAAAACTGCAACACAATCTT 57.630 36.364 0.00 0.00 0.00 2.40
49 50 4.743493 ACGAAAACTGCAACACAATCTTT 58.257 34.783 0.00 0.00 0.00 2.52
50 51 4.562394 ACGAAAACTGCAACACAATCTTTG 59.438 37.500 0.00 0.00 0.00 2.77
51 52 4.562394 CGAAAACTGCAACACAATCTTTGT 59.438 37.500 0.00 0.00 46.75 2.83
52 53 5.062058 CGAAAACTGCAACACAATCTTTGTT 59.938 36.000 0.00 0.00 43.23 2.83
67 68 4.386245 GTTGCAAACGTTTCCGCA 57.614 50.000 18.81 18.81 36.92 5.69
68 69 2.654939 GTTGCAAACGTTTCCGCAA 58.345 47.368 25.96 25.96 41.79 4.85
69 70 2.654939 TTGCAAACGTTTCCGCAAC 58.345 47.368 25.96 8.54 39.32 4.17
70 71 0.109272 TTGCAAACGTTTCCGCAACA 60.109 45.000 25.96 12.25 39.32 3.33
71 72 0.798771 TGCAAACGTTTCCGCAACAC 60.799 50.000 20.01 1.56 37.70 3.32
72 73 0.798771 GCAAACGTTTCCGCAACACA 60.799 50.000 11.37 0.00 37.70 3.72
73 74 1.618861 CAAACGTTTCCGCAACACAA 58.381 45.000 11.37 0.00 37.70 3.33
74 75 1.581602 CAAACGTTTCCGCAACACAAG 59.418 47.619 11.37 0.00 37.70 3.16
75 76 0.099791 AACGTTTCCGCAACACAAGG 59.900 50.000 0.00 0.00 37.70 3.61
76 77 1.027792 ACGTTTCCGCAACACAAGGT 61.028 50.000 0.00 0.00 37.70 3.50
77 78 0.316689 CGTTTCCGCAACACAAGGTC 60.317 55.000 0.00 0.00 34.68 3.85
78 79 0.736053 GTTTCCGCAACACAAGGTCA 59.264 50.000 0.00 0.00 35.18 4.02
79 80 0.736053 TTTCCGCAACACAAGGTCAC 59.264 50.000 0.00 0.00 0.00 3.67
80 81 1.433053 TTCCGCAACACAAGGTCACG 61.433 55.000 0.00 0.00 0.00 4.35
81 82 1.885388 CCGCAACACAAGGTCACGA 60.885 57.895 0.00 0.00 31.47 4.35
82 83 1.433053 CCGCAACACAAGGTCACGAA 61.433 55.000 0.00 0.00 31.47 3.85
83 84 0.315869 CGCAACACAAGGTCACGAAC 60.316 55.000 0.00 0.00 31.47 3.95
84 85 0.730265 GCAACACAAGGTCACGAACA 59.270 50.000 0.00 0.00 0.00 3.18
85 86 1.268032 GCAACACAAGGTCACGAACAG 60.268 52.381 0.00 0.00 0.00 3.16
86 87 2.006888 CAACACAAGGTCACGAACAGT 58.993 47.619 0.00 0.00 0.00 3.55
87 88 2.396590 ACACAAGGTCACGAACAGTT 57.603 45.000 0.00 0.00 0.00 3.16
88 89 2.706890 ACACAAGGTCACGAACAGTTT 58.293 42.857 0.00 0.00 0.00 2.66
89 90 3.078837 ACACAAGGTCACGAACAGTTTT 58.921 40.909 0.00 0.00 0.00 2.43
90 91 4.255301 ACACAAGGTCACGAACAGTTTTA 58.745 39.130 0.00 0.00 0.00 1.52
91 92 4.696402 ACACAAGGTCACGAACAGTTTTAA 59.304 37.500 0.00 0.00 0.00 1.52
92 93 5.181622 ACACAAGGTCACGAACAGTTTTAAA 59.818 36.000 0.00 0.00 0.00 1.52
93 94 6.087522 CACAAGGTCACGAACAGTTTTAAAA 58.912 36.000 0.00 0.00 0.00 1.52
94 95 6.583050 CACAAGGTCACGAACAGTTTTAAAAA 59.417 34.615 1.31 0.00 0.00 1.94
95 96 7.274686 CACAAGGTCACGAACAGTTTTAAAAAT 59.725 33.333 1.31 0.00 0.00 1.82
96 97 7.274686 ACAAGGTCACGAACAGTTTTAAAAATG 59.725 33.333 22.93 22.93 39.65 2.32
194 195 9.612066 AAAAATATCCACAAATTTGAACACTGT 57.388 25.926 24.64 0.00 0.00 3.55
195 196 9.612066 AAAATATCCACAAATTTGAACACTGTT 57.388 25.926 24.64 8.06 0.00 3.16
196 197 8.816640 AATATCCACAAATTTGAACACTGTTC 57.183 30.769 24.64 14.10 0.00 3.18
197 198 5.651387 TCCACAAATTTGAACACTGTTCA 57.349 34.783 24.64 18.83 0.00 3.18
198 199 6.219417 TCCACAAATTTGAACACTGTTCAT 57.781 33.333 24.64 8.53 0.00 2.57
199 200 6.041511 TCCACAAATTTGAACACTGTTCATG 58.958 36.000 24.64 19.13 0.00 3.07
200 201 6.041511 CCACAAATTTGAACACTGTTCATGA 58.958 36.000 24.64 15.41 0.00 3.07
201 202 6.199531 CCACAAATTTGAACACTGTTCATGAG 59.800 38.462 24.64 15.88 0.00 2.90
202 203 6.753279 CACAAATTTGAACACTGTTCATGAGT 59.247 34.615 24.64 14.53 0.00 3.41
203 204 7.276218 CACAAATTTGAACACTGTTCATGAGTT 59.724 33.333 24.64 16.54 0.00 3.01
204 205 7.818930 ACAAATTTGAACACTGTTCATGAGTTT 59.181 29.630 24.64 15.13 0.00 2.66
205 206 8.658609 CAAATTTGAACACTGTTCATGAGTTTT 58.341 29.630 22.39 14.80 0.00 2.43
206 207 9.868277 AAATTTGAACACTGTTCATGAGTTTTA 57.132 25.926 22.39 5.23 0.00 1.52
207 208 9.868277 AATTTGAACACTGTTCATGAGTTTTAA 57.132 25.926 22.39 12.83 0.00 1.52
208 209 9.868277 ATTTGAACACTGTTCATGAGTTTTAAA 57.132 25.926 22.39 12.23 0.00 1.52
209 210 9.698309 TTTGAACACTGTTCATGAGTTTTAAAA 57.302 25.926 22.39 9.16 0.00 1.52
210 211 9.698309 TTGAACACTGTTCATGAGTTTTAAAAA 57.302 25.926 22.39 3.28 0.00 1.94
257 258 9.611284 TTGTTTACGATTTCATGAAAATGAGAG 57.389 29.630 23.91 13.53 37.70 3.20
258 259 8.783093 TGTTTACGATTTCATGAAAATGAGAGT 58.217 29.630 23.91 17.59 37.70 3.24
259 260 9.055248 GTTTACGATTTCATGAAAATGAGAGTG 57.945 33.333 23.91 10.30 37.70 3.51
260 261 8.546597 TTACGATTTCATGAAAATGAGAGTGA 57.453 30.769 23.91 11.53 37.70 3.41
261 262 6.835914 ACGATTTCATGAAAATGAGAGTGAC 58.164 36.000 23.91 5.85 37.70 3.67
262 263 6.427853 ACGATTTCATGAAAATGAGAGTGACA 59.572 34.615 23.91 0.00 37.70 3.58
263 264 6.959871 CGATTTCATGAAAATGAGAGTGACAG 59.040 38.462 23.91 1.46 37.70 3.51
264 265 5.618056 TTCATGAAAATGAGAGTGACAGC 57.382 39.130 5.45 0.00 31.46 4.40
265 266 3.681417 TCATGAAAATGAGAGTGACAGCG 59.319 43.478 0.00 0.00 0.00 5.18
266 267 3.111853 TGAAAATGAGAGTGACAGCGT 57.888 42.857 0.00 0.00 0.00 5.07
267 268 4.251543 TGAAAATGAGAGTGACAGCGTA 57.748 40.909 0.00 0.00 0.00 4.42
268 269 3.987868 TGAAAATGAGAGTGACAGCGTAC 59.012 43.478 0.00 0.00 0.00 3.67
269 270 3.944055 AAATGAGAGTGACAGCGTACT 57.056 42.857 0.00 0.00 0.00 2.73
270 271 3.495670 AATGAGAGTGACAGCGTACTC 57.504 47.619 0.00 0.00 42.77 2.59
271 272 0.796927 TGAGAGTGACAGCGTACTCG 59.203 55.000 0.00 0.00 46.05 4.18
272 273 0.097325 GAGAGTGACAGCGTACTCGG 59.903 60.000 0.00 0.00 46.05 4.63
273 274 1.514443 GAGTGACAGCGTACTCGGC 60.514 63.158 0.00 0.00 34.60 5.54
274 275 2.874780 GTGACAGCGTACTCGGCG 60.875 66.667 0.00 0.00 37.56 6.46
275 276 3.051479 TGACAGCGTACTCGGCGA 61.051 61.111 10.14 10.14 37.56 5.54
276 277 2.404186 TGACAGCGTACTCGGCGAT 61.404 57.895 11.27 3.37 37.56 4.58
278 279 3.323136 CAGCGTACTCGGCGATGC 61.323 66.667 11.27 12.61 38.85 3.91
279 280 3.822192 AGCGTACTCGGCGATGCA 61.822 61.111 11.27 0.00 37.56 3.96
280 281 2.883730 GCGTACTCGGCGATGCAA 60.884 61.111 11.27 0.00 37.56 4.08
287 288 2.080693 ACTCGGCGATGCAACAAAATA 58.919 42.857 11.27 0.00 0.00 1.40
304 305 7.042797 ACAAAATATGGTCATGGCTATTGAC 57.957 36.000 0.00 7.10 42.20 3.18
367 369 6.951256 CTTTTGCTAGTATTTCAAAAGGGC 57.049 37.500 17.82 0.00 46.16 5.19
377 379 1.923356 TCAAAAGGGCCTCATGGAAC 58.077 50.000 6.46 0.00 34.57 3.62
399 401 7.603784 GGAACATTTAGGATTTTCTGTGCAATT 59.396 33.333 0.00 0.00 0.00 2.32
460 462 7.438564 TGACATTGCAGTTTTCTACTACTACA 58.561 34.615 0.00 0.00 34.56 2.74
502 530 6.452350 GCGGACATGACATTTATTTTGAAACG 60.452 38.462 0.00 0.00 0.00 3.60
504 532 6.310224 GGACATGACATTTATTTTGAAACGGG 59.690 38.462 0.00 0.00 0.00 5.28
507 535 4.589374 TGACATTTATTTTGAAACGGGGGT 59.411 37.500 0.00 0.00 0.00 4.95
591 624 1.737236 GCACAAACATACCAGCATCGA 59.263 47.619 0.00 0.00 0.00 3.59
647 708 3.282745 CTCTGGACACACGGACCGG 62.283 68.421 20.00 9.81 0.00 5.28
648 709 4.373116 CTGGACACACGGACCGGG 62.373 72.222 16.39 16.39 35.82 5.73
769 836 4.454847 TCCTCGCGAGTCCATAATAAGTAG 59.545 45.833 32.41 13.35 0.00 2.57
770 837 4.379603 CCTCGCGAGTCCATAATAAGTAGG 60.380 50.000 32.41 10.29 0.00 3.18
771 838 4.392047 TCGCGAGTCCATAATAAGTAGGA 58.608 43.478 3.71 0.00 0.00 2.94
772 839 4.454847 TCGCGAGTCCATAATAAGTAGGAG 59.545 45.833 3.71 0.00 0.00 3.69
973 1058 5.988287 TCTTTCCCGTAATAATAAACCCGT 58.012 37.500 0.00 0.00 0.00 5.28
977 1062 4.343526 TCCCGTAATAATAAACCCGTAGCA 59.656 41.667 0.00 0.00 0.00 3.49
1179 1264 1.078426 ACCGCTCCCAAATTCTCCG 60.078 57.895 0.00 0.00 0.00 4.63
1180 1265 2.472909 CCGCTCCCAAATTCTCCGC 61.473 63.158 0.00 0.00 0.00 5.54
1183 1268 1.819632 CTCCCAAATTCTCCGCCCG 60.820 63.158 0.00 0.00 0.00 6.13
1184 1269 3.518068 CCCAAATTCTCCGCCCGC 61.518 66.667 0.00 0.00 0.00 6.13
1200 1285 2.749441 GCAGCCCAACCAGAGAGC 60.749 66.667 0.00 0.00 0.00 4.09
1201 1286 2.045536 CAGCCCAACCAGAGAGCC 60.046 66.667 0.00 0.00 0.00 4.70
1202 1287 2.530151 AGCCCAACCAGAGAGCCA 60.530 61.111 0.00 0.00 0.00 4.75
1203 1288 2.045536 GCCCAACCAGAGAGCCAG 60.046 66.667 0.00 0.00 0.00 4.85
1282 1370 2.058675 CCCGCCGATAAATCCCTCT 58.941 57.895 0.00 0.00 0.00 3.69
1286 1374 1.608283 CGCCGATAAATCCCTCTTCCC 60.608 57.143 0.00 0.00 0.00 3.97
1467 1565 7.575332 TTTGTTTATTTATGCTCGCTTTTCC 57.425 32.000 0.00 0.00 0.00 3.13
1484 1582 4.473520 CCGGCCGATGCTGTCCTT 62.474 66.667 30.73 0.00 42.66 3.36
1645 1763 2.280308 TCCTAGCCAATACCCAAGGT 57.720 50.000 0.00 0.00 40.16 3.50
1800 1925 7.654923 TGTTTCTAGTTCATGAGCTATAGCATG 59.345 37.037 26.07 20.26 45.16 4.06
1801 1926 6.907853 TCTAGTTCATGAGCTATAGCATGT 57.092 37.500 26.07 6.06 45.16 3.21
1802 1927 7.295322 TCTAGTTCATGAGCTATAGCATGTT 57.705 36.000 26.07 5.67 45.16 2.71
1803 1928 7.730084 TCTAGTTCATGAGCTATAGCATGTTT 58.270 34.615 26.07 5.26 45.16 2.83
1953 2078 0.178950 TCTGAGCTGGTGTGGTCTCT 60.179 55.000 0.00 0.00 35.68 3.10
3268 3406 3.807553 TCTTGTCAAATGTCAGTCAGCA 58.192 40.909 0.00 0.00 0.00 4.41
3271 3409 4.011966 TGTCAAATGTCAGTCAGCATCT 57.988 40.909 0.00 0.00 0.00 2.90
3280 3418 4.256920 GTCAGTCAGCATCTGGTGTTAAT 58.743 43.478 9.03 0.00 43.46 1.40
3821 3959 6.200114 ACCCCTCATCAATCAGAAATCAATT 58.800 36.000 0.00 0.00 0.00 2.32
3931 4069 0.539438 TTGATGTGGCTGTTGGGACC 60.539 55.000 0.00 0.00 0.00 4.46
4376 4515 1.144936 CCGGTGATTCCTCCAGAGC 59.855 63.158 0.00 0.00 0.00 4.09
4433 4572 2.793933 GCAAAGAGATTGGATGCGCTTC 60.794 50.000 14.55 14.55 39.54 3.86
4961 5100 2.177173 GATTTTCGCGATCACCTTTGC 58.823 47.619 10.88 0.00 0.00 3.68
5038 5177 3.379372 CAGGGATGCCATAGTGTTTTCTG 59.621 47.826 5.86 0.00 0.00 3.02
5060 5199 4.704540 TGTACATAAGAAAAGGGCACATGG 59.295 41.667 0.00 0.00 0.00 3.66
5155 5295 0.398696 TATGTGGGTTTGGTGCTCGT 59.601 50.000 0.00 0.00 0.00 4.18
5229 5369 3.956744 ACTGGGAGAACTCATTTTAGGC 58.043 45.455 4.23 0.00 0.00 3.93
5230 5370 3.282885 CTGGGAGAACTCATTTTAGGCC 58.717 50.000 0.00 0.00 0.00 5.19
5249 5389 3.305608 GGCCAGGAGCACATATTAAATGC 60.306 47.826 0.00 0.00 46.50 3.56
5431 5711 1.203187 TCAGTGGGTTCTAGAGTGCCT 60.203 52.381 9.10 0.00 0.00 4.75
5514 5794 7.001073 GCTTAAATTGAGGAAGATACTGGGAT 58.999 38.462 0.00 0.00 0.00 3.85
5537 5817 6.377327 TCTGAAGAGTTGATGTTTGTTTCC 57.623 37.500 0.00 0.00 0.00 3.13
5571 5851 3.307691 GGTGATCCTTGACAGATGGTTGA 60.308 47.826 0.00 0.00 0.00 3.18
5621 5901 1.796459 GGCTTTTTCTTGCGTCTACGA 59.204 47.619 6.71 0.00 43.02 3.43
5624 5904 4.092383 GGCTTTTTCTTGCGTCTACGATTA 59.908 41.667 6.71 0.00 43.02 1.75
5691 5971 6.422701 CGCTCGGATAAATGGTAAATGACTAA 59.577 38.462 0.00 0.00 0.00 2.24
5757 6037 6.699575 ATAATGTCTAACTTGGTGATTGGC 57.300 37.500 0.00 0.00 0.00 4.52
5866 6148 8.486210 TGTAATATGAACTTCTTACAGGAGCAT 58.514 33.333 0.00 0.00 32.10 3.79
5896 6178 1.022735 TCGCCTCTCTGTAACGATCC 58.977 55.000 0.00 0.00 0.00 3.36
6000 6282 7.867909 TCTTATCAGTGTTGTGAAGTAGAACAG 59.132 37.037 0.00 0.00 42.46 3.16
6028 6310 6.263842 TCATGTTTTGATTTCTCTTGCTGACT 59.736 34.615 0.00 0.00 0.00 3.41
6178 6467 3.256383 CCTTGTCCATGTGATTGCAAAGA 59.744 43.478 1.71 0.00 0.00 2.52
6194 6483 8.845413 ATTGCAAAGAGAGATATGTAATCTCC 57.155 34.615 1.71 4.14 44.15 3.71
6226 6517 1.116308 TGGTCCTGTCAGTCAACGAA 58.884 50.000 0.00 0.00 0.00 3.85
6238 6529 7.320399 TGTCAGTCAACGAACAATCTATGTAT 58.680 34.615 0.00 0.00 42.99 2.29
6343 6634 6.292168 CGTCGAAAGAAGAACTTAGCAAGAAA 60.292 38.462 0.00 0.00 45.01 2.52
6376 6667 5.172205 AGAGAGCTACTTCATTTCGGAAAC 58.828 41.667 5.12 0.00 0.00 2.78
6453 6746 2.617021 GGTCTTTACCGCCTTTCATCCA 60.617 50.000 0.00 0.00 35.62 3.41
6478 6771 2.030551 CCAGCGATGCAAGCATGAT 58.969 52.632 12.94 1.08 36.70 2.45
6593 6886 7.873505 GGTATATTGAGAGATTGAGGTTGTACC 59.126 40.741 0.00 0.00 38.99 3.34
6612 6905 9.485591 GTTGTACCAATACACGATTCTATTTTG 57.514 33.333 0.00 0.00 41.12 2.44
6737 7030 0.451383 TTCATTGCTTGCGGGATTCG 59.549 50.000 0.00 0.00 42.76 3.34
6738 7031 1.064621 CATTGCTTGCGGGATTCGG 59.935 57.895 0.00 0.00 39.69 4.30
6752 7045 1.859080 GATTCGGTTCGTGAGGCATAC 59.141 52.381 0.00 0.00 0.00 2.39
6774 7071 5.947443 ACTGTATGTACTAAACACTCGGTC 58.053 41.667 0.00 0.00 42.09 4.79
6797 7094 2.354203 GGATCCTGTGAGTGGTGAGTTC 60.354 54.545 3.84 0.00 0.00 3.01
6864 7162 8.991243 AAACATCATTTGGTCATTACAATCAG 57.009 30.769 0.00 0.00 0.00 2.90
6900 7198 3.245229 TGCCAAATCCAGTGGTAGTTGAT 60.245 43.478 17.69 0.00 38.50 2.57
6962 7261 4.381292 GCTTGGCTAATTCATGAGCAAACT 60.381 41.667 6.95 0.00 40.64 2.66
6998 7297 8.657387 TCTCCCTATCTTCAGGATAACAATAG 57.343 38.462 0.00 0.00 38.00 1.73
7011 7310 8.820831 CAGGATAACAATAGTCTCCCTAATCAT 58.179 37.037 0.00 0.00 32.56 2.45
7023 7322 7.455953 AGTCTCCCTAATCATCATGTAATGCTA 59.544 37.037 0.00 0.00 46.21 3.49
7027 7326 8.481314 TCCCTAATCATCATGTAATGCTATCTC 58.519 37.037 0.00 0.00 46.21 2.75
7042 7341 2.653234 ATCTCCATGCTGCTAAAGGG 57.347 50.000 0.00 0.00 0.00 3.95
7066 7365 4.858850 TCACAGGAGCCATAATGTTTGAT 58.141 39.130 0.00 0.00 0.00 2.57
7077 7376 6.583806 GCCATAATGTTTGATATAACAGCAGC 59.416 38.462 0.00 0.00 40.99 5.25
7080 7379 6.513806 AATGTTTGATATAACAGCAGCACA 57.486 33.333 0.00 0.00 40.99 4.57
7091 7390 3.151554 ACAGCAGCACAATCAGATTCAA 58.848 40.909 0.00 0.00 0.00 2.69
7099 7398 7.041576 GCAGCACAATCAGATTCAACTATGATA 60.042 37.037 0.00 0.00 34.96 2.15
7156 7455 3.595758 GGCACACGCACAAGCCTT 61.596 61.111 0.00 0.00 43.70 4.35
7177 7476 0.737715 GCCTCCTCAACACTAGCACG 60.738 60.000 0.00 0.00 0.00 5.34
7182 7481 0.602638 CTCAACACTAGCACGGGCAA 60.603 55.000 14.57 0.00 44.61 4.52
7187 7486 1.913762 ACTAGCACGGGCAAGGAGT 60.914 57.895 14.57 6.56 44.61 3.85
7188 7487 1.296715 CTAGCACGGGCAAGGAGTT 59.703 57.895 14.57 0.00 44.61 3.01
7189 7488 0.321653 CTAGCACGGGCAAGGAGTTT 60.322 55.000 14.57 0.00 44.61 2.66
7190 7489 0.109723 TAGCACGGGCAAGGAGTTTT 59.890 50.000 14.57 0.00 44.61 2.43
7191 7490 0.109723 AGCACGGGCAAGGAGTTTTA 59.890 50.000 14.57 0.00 44.61 1.52
7192 7491 0.240145 GCACGGGCAAGGAGTTTTAC 59.760 55.000 3.77 0.00 40.72 2.01
7193 7492 1.600023 CACGGGCAAGGAGTTTTACA 58.400 50.000 0.00 0.00 0.00 2.41
7194 7493 1.265905 CACGGGCAAGGAGTTTTACAC 59.734 52.381 0.00 0.00 0.00 2.90
7195 7494 0.879090 CGGGCAAGGAGTTTTACACC 59.121 55.000 0.00 0.00 0.00 4.16
7196 7495 1.254026 GGGCAAGGAGTTTTACACCC 58.746 55.000 0.00 0.00 28.26 4.61
7197 7496 1.203013 GGGCAAGGAGTTTTACACCCT 60.203 52.381 0.00 0.00 33.11 4.34
7198 7497 2.160205 GGCAAGGAGTTTTACACCCTC 58.840 52.381 0.00 0.00 28.26 4.30
7199 7498 2.488347 GGCAAGGAGTTTTACACCCTCA 60.488 50.000 0.00 0.00 28.26 3.86
7200 7499 3.219281 GCAAGGAGTTTTACACCCTCAA 58.781 45.455 0.00 0.00 28.26 3.02
7201 7500 3.004419 GCAAGGAGTTTTACACCCTCAAC 59.996 47.826 0.00 0.00 28.26 3.18
7202 7501 4.461198 CAAGGAGTTTTACACCCTCAACT 58.539 43.478 0.00 0.00 32.02 3.16
7203 7502 4.790718 AGGAGTTTTACACCCTCAACTT 57.209 40.909 0.00 0.00 29.43 2.66
7204 7503 4.461198 AGGAGTTTTACACCCTCAACTTG 58.539 43.478 0.00 0.00 29.43 3.16
7205 7504 3.568430 GGAGTTTTACACCCTCAACTTGG 59.432 47.826 0.00 0.00 29.43 3.61
7206 7505 4.457466 GAGTTTTACACCCTCAACTTGGA 58.543 43.478 0.00 0.00 29.43 3.53
7207 7506 4.204799 AGTTTTACACCCTCAACTTGGAC 58.795 43.478 0.00 0.00 0.00 4.02
7208 7507 3.935818 TTTACACCCTCAACTTGGACA 57.064 42.857 0.00 0.00 0.00 4.02
7209 7508 3.935818 TTACACCCTCAACTTGGACAA 57.064 42.857 0.00 0.00 0.00 3.18
7210 7509 2.818751 ACACCCTCAACTTGGACAAA 57.181 45.000 0.00 0.00 0.00 2.83
7211 7510 3.312736 ACACCCTCAACTTGGACAAAT 57.687 42.857 0.00 0.00 0.00 2.32
7212 7511 3.222603 ACACCCTCAACTTGGACAAATC 58.777 45.455 0.00 0.00 0.00 2.17
7213 7512 2.558359 CACCCTCAACTTGGACAAATCC 59.442 50.000 0.00 0.00 46.48 3.01
7214 7513 2.447047 ACCCTCAACTTGGACAAATCCT 59.553 45.455 0.00 0.00 46.43 3.24
7215 7514 3.084786 CCCTCAACTTGGACAAATCCTC 58.915 50.000 0.00 0.00 46.43 3.71
7216 7515 3.084786 CCTCAACTTGGACAAATCCTCC 58.915 50.000 0.00 0.00 46.43 4.30
7217 7516 3.084786 CTCAACTTGGACAAATCCTCCC 58.915 50.000 0.00 0.00 46.43 4.30
7218 7517 2.445145 TCAACTTGGACAAATCCTCCCA 59.555 45.455 0.00 0.00 46.43 4.37
7219 7518 3.075882 TCAACTTGGACAAATCCTCCCAT 59.924 43.478 0.00 0.00 46.43 4.00
7220 7519 3.091633 ACTTGGACAAATCCTCCCATG 57.908 47.619 0.00 0.00 46.43 3.66
7221 7520 2.379907 ACTTGGACAAATCCTCCCATGT 59.620 45.455 0.00 0.00 46.43 3.21
7222 7521 3.181418 ACTTGGACAAATCCTCCCATGTT 60.181 43.478 0.00 0.00 46.43 2.71
7223 7522 3.085952 TGGACAAATCCTCCCATGTTC 57.914 47.619 0.00 0.00 46.43 3.18
7224 7523 2.291540 TGGACAAATCCTCCCATGTTCC 60.292 50.000 0.00 0.00 46.43 3.62
7225 7524 2.024941 GGACAAATCCTCCCATGTTCCT 60.025 50.000 0.00 0.00 42.45 3.36
7226 7525 3.202151 GGACAAATCCTCCCATGTTCCTA 59.798 47.826 0.00 0.00 42.45 2.94
7227 7526 4.141158 GGACAAATCCTCCCATGTTCCTAT 60.141 45.833 0.00 0.00 42.45 2.57
7228 7527 5.073144 GGACAAATCCTCCCATGTTCCTATA 59.927 44.000 0.00 0.00 42.45 1.31
7229 7528 6.192970 ACAAATCCTCCCATGTTCCTATAG 57.807 41.667 0.00 0.00 0.00 1.31
7230 7529 5.073691 ACAAATCCTCCCATGTTCCTATAGG 59.926 44.000 13.07 13.07 0.00 2.57
7231 7530 4.785173 ATCCTCCCATGTTCCTATAGGA 57.215 45.455 18.00 18.00 43.73 2.94
7232 7531 4.785173 TCCTCCCATGTTCCTATAGGAT 57.215 45.455 22.30 4.86 44.98 3.24
7233 7532 4.429505 TCCTCCCATGTTCCTATAGGATG 58.570 47.826 22.30 16.67 44.98 3.51
7234 7533 3.054802 CCTCCCATGTTCCTATAGGATGC 60.055 52.174 22.30 17.38 44.98 3.91
7235 7534 2.567169 TCCCATGTTCCTATAGGATGCG 59.433 50.000 22.30 10.27 44.98 4.73
7236 7535 2.303022 CCCATGTTCCTATAGGATGCGT 59.697 50.000 22.30 15.66 44.98 5.24
7237 7536 3.244561 CCCATGTTCCTATAGGATGCGTT 60.245 47.826 22.30 7.58 44.98 4.84
7238 7537 4.389374 CCATGTTCCTATAGGATGCGTTT 58.611 43.478 22.30 5.43 44.98 3.60
7239 7538 4.214119 CCATGTTCCTATAGGATGCGTTTG 59.786 45.833 22.30 14.80 44.98 2.93
7240 7539 3.804036 TGTTCCTATAGGATGCGTTTGG 58.196 45.455 22.30 0.00 44.98 3.28
7241 7540 3.199071 TGTTCCTATAGGATGCGTTTGGT 59.801 43.478 22.30 0.00 44.98 3.67
7242 7541 4.406326 TGTTCCTATAGGATGCGTTTGGTA 59.594 41.667 22.30 0.19 44.98 3.25
7243 7542 4.866508 TCCTATAGGATGCGTTTGGTAG 57.133 45.455 18.00 0.00 39.78 3.18
7244 7543 3.006537 TCCTATAGGATGCGTTTGGTAGC 59.993 47.826 18.00 0.00 39.78 3.58
7245 7544 2.256117 ATAGGATGCGTTTGGTAGCC 57.744 50.000 0.00 0.00 37.02 3.93
7246 7545 0.179468 TAGGATGCGTTTGGTAGCCC 59.821 55.000 0.00 0.00 37.55 5.19
7247 7546 2.469516 GGATGCGTTTGGTAGCCCG 61.470 63.158 0.00 0.00 29.53 6.13
7248 7547 3.108357 GATGCGTTTGGTAGCCCGC 62.108 63.158 12.08 12.08 45.92 6.13
7250 7549 3.131478 GCGTTTGGTAGCCCGCAT 61.131 61.111 13.54 0.00 45.12 4.73
7251 7550 1.816259 GCGTTTGGTAGCCCGCATA 60.816 57.895 13.54 0.00 45.12 3.14
7252 7551 1.164041 GCGTTTGGTAGCCCGCATAT 61.164 55.000 13.54 0.00 45.12 1.78
7253 7552 1.874739 GCGTTTGGTAGCCCGCATATA 60.875 52.381 13.54 0.00 45.12 0.86
7254 7553 1.796459 CGTTTGGTAGCCCGCATATAC 59.204 52.381 0.00 0.00 0.00 1.47
7255 7554 2.148768 GTTTGGTAGCCCGCATATACC 58.851 52.381 0.00 0.00 39.57 2.73
7256 7555 0.688487 TTGGTAGCCCGCATATACCC 59.312 55.000 0.00 0.00 38.56 3.69
7257 7556 1.196104 TGGTAGCCCGCATATACCCC 61.196 60.000 0.00 0.00 38.56 4.95
7258 7557 1.196104 GGTAGCCCGCATATACCCCA 61.196 60.000 0.00 0.00 34.14 4.96
7259 7558 0.249398 GTAGCCCGCATATACCCCAG 59.751 60.000 0.00 0.00 0.00 4.45
7260 7559 1.550130 TAGCCCGCATATACCCCAGC 61.550 60.000 0.00 0.00 0.00 4.85
7261 7560 2.351276 CCCGCATATACCCCAGCC 59.649 66.667 0.00 0.00 0.00 4.85
7262 7561 2.525124 CCCGCATATACCCCAGCCA 61.525 63.158 0.00 0.00 0.00 4.75
7263 7562 1.003355 CCGCATATACCCCAGCCAG 60.003 63.158 0.00 0.00 0.00 4.85
7264 7563 1.003355 CGCATATACCCCAGCCAGG 60.003 63.158 0.00 0.00 37.03 4.45
7265 7564 1.303643 GCATATACCCCAGCCAGGC 60.304 63.158 1.84 1.84 35.39 4.85
7266 7565 1.380302 CATATACCCCAGCCAGGCC 59.620 63.158 8.22 0.00 35.39 5.19
7267 7566 1.852626 ATATACCCCAGCCAGGCCC 60.853 63.158 8.22 0.00 35.39 5.80
7303 7602 3.990466 CCCGTTTGGTTACCGCAT 58.010 55.556 0.00 0.00 0.00 4.73
7304 7603 2.259281 CCCGTTTGGTTACCGCATT 58.741 52.632 0.00 0.00 0.00 3.56
7305 7604 1.451067 CCCGTTTGGTTACCGCATTA 58.549 50.000 0.00 0.00 0.00 1.90
7306 7605 2.018515 CCCGTTTGGTTACCGCATTAT 58.981 47.619 0.00 0.00 0.00 1.28
7307 7606 2.424246 CCCGTTTGGTTACCGCATTATT 59.576 45.455 0.00 0.00 0.00 1.40
7308 7607 3.430931 CCGTTTGGTTACCGCATTATTG 58.569 45.455 0.00 0.00 0.00 1.90
7309 7608 3.430931 CGTTTGGTTACCGCATTATTGG 58.569 45.455 0.00 0.00 0.00 3.16
7310 7609 3.732471 CGTTTGGTTACCGCATTATTGGG 60.732 47.826 0.00 0.00 35.65 4.12
7311 7610 2.810870 TGGTTACCGCATTATTGGGT 57.189 45.000 0.00 2.99 37.84 4.51
7312 7611 2.645802 TGGTTACCGCATTATTGGGTC 58.354 47.619 0.00 0.00 35.28 4.46
7313 7612 2.240160 TGGTTACCGCATTATTGGGTCT 59.760 45.455 0.00 0.00 35.28 3.85
7314 7613 2.616842 GGTTACCGCATTATTGGGTCTG 59.383 50.000 0.00 0.00 35.28 3.51
7315 7614 1.961793 TACCGCATTATTGGGTCTGC 58.038 50.000 1.64 0.00 35.28 4.26
7316 7615 0.034574 ACCGCATTATTGGGTCTGCA 60.035 50.000 0.00 0.00 34.29 4.41
7317 7616 1.321474 CCGCATTATTGGGTCTGCAT 58.679 50.000 0.00 0.00 34.29 3.96
7318 7617 2.158682 ACCGCATTATTGGGTCTGCATA 60.159 45.455 0.00 0.00 34.29 3.14
7319 7618 2.485426 CCGCATTATTGGGTCTGCATAG 59.515 50.000 0.00 0.00 34.29 2.23
7320 7619 2.095567 CGCATTATTGGGTCTGCATAGC 60.096 50.000 0.00 0.00 34.29 2.97
7321 7620 2.886523 GCATTATTGGGTCTGCATAGCA 59.113 45.455 3.58 0.00 36.92 3.49
7322 7621 3.304928 GCATTATTGGGTCTGCATAGCAC 60.305 47.826 3.58 0.00 33.79 4.40
7323 7622 3.643199 TTATTGGGTCTGCATAGCACA 57.357 42.857 3.58 0.00 33.79 4.57
7324 7623 2.512692 ATTGGGTCTGCATAGCACAA 57.487 45.000 3.58 3.32 33.79 3.33
7325 7624 2.284754 TTGGGTCTGCATAGCACAAA 57.715 45.000 3.58 0.00 33.79 2.83
7326 7625 2.512692 TGGGTCTGCATAGCACAAAT 57.487 45.000 3.58 0.00 33.79 2.32
7327 7626 2.806434 TGGGTCTGCATAGCACAAATT 58.194 42.857 3.58 0.00 33.79 1.82
7328 7627 3.164268 TGGGTCTGCATAGCACAAATTT 58.836 40.909 3.58 0.00 33.79 1.82
7329 7628 3.577848 TGGGTCTGCATAGCACAAATTTT 59.422 39.130 3.58 0.00 33.79 1.82
7330 7629 4.769488 TGGGTCTGCATAGCACAAATTTTA 59.231 37.500 3.58 0.00 33.79 1.52
7331 7630 5.244851 TGGGTCTGCATAGCACAAATTTTAA 59.755 36.000 3.58 0.00 33.79 1.52
7332 7631 6.162777 GGGTCTGCATAGCACAAATTTTAAA 58.837 36.000 3.58 0.00 33.79 1.52
7333 7632 6.311200 GGGTCTGCATAGCACAAATTTTAAAG 59.689 38.462 3.58 0.00 33.79 1.85
7334 7633 6.183360 GGTCTGCATAGCACAAATTTTAAAGC 60.183 38.462 0.00 0.00 33.79 3.51
7335 7634 6.365789 GTCTGCATAGCACAAATTTTAAAGCA 59.634 34.615 0.00 0.00 33.79 3.91
7336 7635 6.365789 TCTGCATAGCACAAATTTTAAAGCAC 59.634 34.615 0.00 0.00 33.79 4.40
7337 7636 5.407995 TGCATAGCACAAATTTTAAAGCACC 59.592 36.000 0.00 0.00 31.71 5.01
7338 7637 5.639082 GCATAGCACAAATTTTAAAGCACCT 59.361 36.000 0.00 0.00 0.00 4.00
7339 7638 6.183360 GCATAGCACAAATTTTAAAGCACCTC 60.183 38.462 0.00 0.00 0.00 3.85
7340 7639 5.535753 AGCACAAATTTTAAAGCACCTCT 57.464 34.783 0.00 0.00 0.00 3.69
7341 7640 5.291971 AGCACAAATTTTAAAGCACCTCTG 58.708 37.500 0.00 0.00 0.00 3.35
7342 7641 5.049828 GCACAAATTTTAAAGCACCTCTGT 58.950 37.500 0.00 0.00 0.00 3.41
7343 7642 5.050837 GCACAAATTTTAAAGCACCTCTGTG 60.051 40.000 0.00 0.00 45.65 3.66
7344 7643 5.463061 CACAAATTTTAAAGCACCTCTGTGG 59.537 40.000 0.00 0.00 42.99 4.17
7345 7644 4.871933 AATTTTAAAGCACCTCTGTGGG 57.128 40.909 0.33 0.00 42.99 4.61
7346 7645 1.616159 TTTAAAGCACCTCTGTGGGC 58.384 50.000 0.33 1.47 42.99 5.36
7347 7646 0.251165 TTAAAGCACCTCTGTGGGCC 60.251 55.000 0.00 0.00 42.99 5.80
7348 7647 1.133809 TAAAGCACCTCTGTGGGCCT 61.134 55.000 4.53 0.00 42.99 5.19
7349 7648 2.703675 AAAGCACCTCTGTGGGCCTG 62.704 60.000 4.53 0.00 42.99 4.85
7351 7650 3.957586 CACCTCTGTGGGCCTGCA 61.958 66.667 4.53 2.86 41.11 4.41
7352 7651 2.937689 ACCTCTGTGGGCCTGCAT 60.938 61.111 4.53 0.00 41.11 3.96
7353 7652 2.124403 CCTCTGTGGGCCTGCATC 60.124 66.667 4.53 0.00 0.00 3.91
7354 7653 2.124403 CTCTGTGGGCCTGCATCC 60.124 66.667 4.53 0.00 0.00 3.51
7355 7654 2.934932 TCTGTGGGCCTGCATCCA 60.935 61.111 4.53 3.84 0.00 3.41
7356 7655 2.439701 CTGTGGGCCTGCATCCAG 60.440 66.667 4.53 0.00 38.85 3.86
7357 7656 2.934932 TGTGGGCCTGCATCCAGA 60.935 61.111 4.53 2.67 41.77 3.86
7358 7657 2.124403 GTGGGCCTGCATCCAGAG 60.124 66.667 4.53 0.00 41.77 3.35
7359 7658 3.414193 TGGGCCTGCATCCAGAGG 61.414 66.667 4.53 0.00 41.77 3.69
7360 7659 3.092511 GGGCCTGCATCCAGAGGA 61.093 66.667 0.84 0.00 41.77 3.71
7361 7660 2.683465 GGGCCTGCATCCAGAGGAA 61.683 63.158 0.84 0.00 41.77 3.36
7362 7661 1.452833 GGCCTGCATCCAGAGGAAC 60.453 63.158 0.00 0.00 41.77 3.62
7363 7662 1.300963 GCCTGCATCCAGAGGAACA 59.699 57.895 0.00 0.00 41.77 3.18
7364 7663 1.028868 GCCTGCATCCAGAGGAACAC 61.029 60.000 0.00 0.00 41.77 3.32
7365 7664 0.617413 CCTGCATCCAGAGGAACACT 59.383 55.000 0.00 0.00 41.77 3.55
7366 7665 1.406614 CCTGCATCCAGAGGAACACTC 60.407 57.143 0.00 0.00 46.98 3.51
7376 7675 1.734465 GAGGAACACTCAAATCTGCCG 59.266 52.381 0.00 0.00 45.85 5.69
7377 7676 1.072331 AGGAACACTCAAATCTGCCGT 59.928 47.619 0.00 0.00 0.00 5.68
7378 7677 1.880027 GGAACACTCAAATCTGCCGTT 59.120 47.619 0.00 0.00 0.00 4.44
7379 7678 2.293399 GGAACACTCAAATCTGCCGTTT 59.707 45.455 0.00 0.00 0.00 3.60
7380 7679 3.243401 GGAACACTCAAATCTGCCGTTTT 60.243 43.478 0.00 0.00 0.00 2.43
7381 7680 4.359706 GAACACTCAAATCTGCCGTTTTT 58.640 39.130 0.00 0.00 0.00 1.94
7382 7681 5.506649 GGAACACTCAAATCTGCCGTTTTTA 60.507 40.000 0.00 0.00 0.00 1.52
7383 7682 5.705609 ACACTCAAATCTGCCGTTTTTAT 57.294 34.783 0.00 0.00 0.00 1.40
7384 7683 5.460646 ACACTCAAATCTGCCGTTTTTATG 58.539 37.500 0.00 0.00 0.00 1.90
7385 7684 4.858692 CACTCAAATCTGCCGTTTTTATGG 59.141 41.667 0.00 0.00 0.00 2.74
7386 7685 4.764823 ACTCAAATCTGCCGTTTTTATGGA 59.235 37.500 0.00 0.00 0.00 3.41
7387 7686 5.106157 ACTCAAATCTGCCGTTTTTATGGAG 60.106 40.000 0.00 0.00 0.00 3.86
7388 7687 4.157656 TCAAATCTGCCGTTTTTATGGAGG 59.842 41.667 0.00 0.00 0.00 4.30
7392 7691 0.455815 GCCGTTTTTATGGAGGCAGG 59.544 55.000 0.00 0.00 46.48 4.85
7393 7692 0.455815 CCGTTTTTATGGAGGCAGGC 59.544 55.000 0.00 0.00 0.00 4.85
7394 7693 0.455815 CGTTTTTATGGAGGCAGGCC 59.544 55.000 0.97 0.97 0.00 5.19
7395 7694 0.824109 GTTTTTATGGAGGCAGGCCC 59.176 55.000 6.70 0.85 36.58 5.80
7396 7695 0.682855 TTTTTATGGAGGCAGGCCCG 60.683 55.000 6.70 0.00 39.21 6.13
7397 7696 1.567208 TTTTATGGAGGCAGGCCCGA 61.567 55.000 6.70 0.00 39.21 5.14
7398 7697 1.983119 TTTATGGAGGCAGGCCCGAG 61.983 60.000 6.70 0.00 39.21 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.691118 TCATGGACTTCTGCAACATAAGC 59.309 43.478 0.00 0.00 0.00 3.09
1 2 5.181009 TCTCATGGACTTCTGCAACATAAG 58.819 41.667 0.00 0.00 0.00 1.73
2 3 5.164620 TCTCATGGACTTCTGCAACATAA 57.835 39.130 0.00 0.00 0.00 1.90
3 4 4.223700 ACTCTCATGGACTTCTGCAACATA 59.776 41.667 0.00 0.00 0.00 2.29
4 5 3.008813 ACTCTCATGGACTTCTGCAACAT 59.991 43.478 0.00 0.00 0.00 2.71
5 6 2.369860 ACTCTCATGGACTTCTGCAACA 59.630 45.455 0.00 0.00 0.00 3.33
6 7 3.051081 ACTCTCATGGACTTCTGCAAC 57.949 47.619 0.00 0.00 0.00 4.17
7 8 3.367395 CGTACTCTCATGGACTTCTGCAA 60.367 47.826 0.00 0.00 0.00 4.08
8 9 2.164422 CGTACTCTCATGGACTTCTGCA 59.836 50.000 0.00 0.00 0.00 4.41
9 10 2.423892 TCGTACTCTCATGGACTTCTGC 59.576 50.000 0.00 0.00 0.00 4.26
10 11 4.703645 TTCGTACTCTCATGGACTTCTG 57.296 45.455 0.00 0.00 0.00 3.02
11 12 5.244178 AGTTTTCGTACTCTCATGGACTTCT 59.756 40.000 0.00 0.00 0.00 2.85
12 13 5.346281 CAGTTTTCGTACTCTCATGGACTTC 59.654 44.000 0.00 0.00 0.00 3.01
13 14 5.230942 CAGTTTTCGTACTCTCATGGACTT 58.769 41.667 0.00 0.00 0.00 3.01
14 15 4.810790 CAGTTTTCGTACTCTCATGGACT 58.189 43.478 0.00 0.00 0.00 3.85
15 16 3.368236 GCAGTTTTCGTACTCTCATGGAC 59.632 47.826 0.00 0.00 0.00 4.02
16 17 3.006430 TGCAGTTTTCGTACTCTCATGGA 59.994 43.478 0.00 0.00 0.00 3.41
17 18 3.325870 TGCAGTTTTCGTACTCTCATGG 58.674 45.455 0.00 0.00 0.00 3.66
18 19 4.211164 TGTTGCAGTTTTCGTACTCTCATG 59.789 41.667 0.00 0.00 0.00 3.07
19 20 4.211374 GTGTTGCAGTTTTCGTACTCTCAT 59.789 41.667 0.00 0.00 0.00 2.90
20 21 3.554324 GTGTTGCAGTTTTCGTACTCTCA 59.446 43.478 0.00 0.00 0.00 3.27
21 22 3.554324 TGTGTTGCAGTTTTCGTACTCTC 59.446 43.478 0.00 0.00 0.00 3.20
22 23 3.527533 TGTGTTGCAGTTTTCGTACTCT 58.472 40.909 0.00 0.00 0.00 3.24
23 24 3.936902 TGTGTTGCAGTTTTCGTACTC 57.063 42.857 0.00 0.00 0.00 2.59
24 25 4.574828 AGATTGTGTTGCAGTTTTCGTACT 59.425 37.500 0.00 0.00 0.00 2.73
25 26 4.844267 AGATTGTGTTGCAGTTTTCGTAC 58.156 39.130 0.00 0.00 0.00 3.67
26 27 5.493133 AAGATTGTGTTGCAGTTTTCGTA 57.507 34.783 0.00 0.00 0.00 3.43
27 28 4.370364 AAGATTGTGTTGCAGTTTTCGT 57.630 36.364 0.00 0.00 0.00 3.85
28 29 4.562394 ACAAAGATTGTGTTGCAGTTTTCG 59.438 37.500 0.00 0.00 43.48 3.46
29 30 6.242829 CAACAAAGATTGTGTTGCAGTTTTC 58.757 36.000 4.52 0.00 46.63 2.29
30 31 6.168164 CAACAAAGATTGTGTTGCAGTTTT 57.832 33.333 4.52 0.00 46.63 2.43
31 32 5.783100 CAACAAAGATTGTGTTGCAGTTT 57.217 34.783 4.52 0.00 46.63 2.66
38 39 4.241681 ACGTTTGCAACAAAGATTGTGTT 58.758 34.783 0.00 0.00 44.59 3.32
39 40 3.843999 ACGTTTGCAACAAAGATTGTGT 58.156 36.364 0.00 0.00 44.59 3.72
40 41 4.838665 AACGTTTGCAACAAAGATTGTG 57.161 36.364 0.00 0.00 44.59 3.33
42 43 4.821012 GGAAACGTTTGCAACAAAGATTG 58.179 39.130 25.29 0.00 0.00 2.67
59 60 0.736053 TGACCTTGTGTTGCGGAAAC 59.264 50.000 0.00 0.00 39.41 2.78
60 61 0.736053 GTGACCTTGTGTTGCGGAAA 59.264 50.000 0.00 0.00 0.00 3.13
61 62 1.433053 CGTGACCTTGTGTTGCGGAA 61.433 55.000 0.00 0.00 0.00 4.30
62 63 1.885388 CGTGACCTTGTGTTGCGGA 60.885 57.895 0.00 0.00 0.00 5.54
63 64 1.433053 TTCGTGACCTTGTGTTGCGG 61.433 55.000 0.00 0.00 0.00 5.69
64 65 0.315869 GTTCGTGACCTTGTGTTGCG 60.316 55.000 0.00 0.00 0.00 4.85
65 66 0.730265 TGTTCGTGACCTTGTGTTGC 59.270 50.000 0.00 0.00 0.00 4.17
66 67 2.006888 ACTGTTCGTGACCTTGTGTTG 58.993 47.619 0.00 0.00 0.00 3.33
67 68 2.396590 ACTGTTCGTGACCTTGTGTT 57.603 45.000 0.00 0.00 0.00 3.32
68 69 2.396590 AACTGTTCGTGACCTTGTGT 57.603 45.000 0.00 0.00 0.00 3.72
69 70 3.757745 AAAACTGTTCGTGACCTTGTG 57.242 42.857 0.00 0.00 0.00 3.33
70 71 5.883503 TTTAAAACTGTTCGTGACCTTGT 57.116 34.783 0.00 0.00 0.00 3.16
71 72 7.274686 ACATTTTTAAAACTGTTCGTGACCTTG 59.725 33.333 15.86 0.00 28.85 3.61
72 73 7.317390 ACATTTTTAAAACTGTTCGTGACCTT 58.683 30.769 15.86 0.00 28.85 3.50
73 74 6.859017 ACATTTTTAAAACTGTTCGTGACCT 58.141 32.000 15.86 0.00 28.85 3.85
74 75 7.514573 AACATTTTTAAAACTGTTCGTGACC 57.485 32.000 23.48 0.00 37.24 4.02
168 169 9.612066 ACAGTGTTCAAATTTGTGGATATTTTT 57.388 25.926 17.47 0.00 0.00 1.94
169 170 9.612066 AACAGTGTTCAAATTTGTGGATATTTT 57.388 25.926 17.47 2.12 0.00 1.82
170 171 9.260002 GAACAGTGTTCAAATTTGTGGATATTT 57.740 29.630 27.37 5.70 0.00 1.40
171 172 8.420222 TGAACAGTGTTCAAATTTGTGGATATT 58.580 29.630 31.49 6.11 0.00 1.28
172 173 7.950512 TGAACAGTGTTCAAATTTGTGGATAT 58.049 30.769 31.49 0.00 0.00 1.63
173 174 7.340122 TGAACAGTGTTCAAATTTGTGGATA 57.660 32.000 31.49 7.83 0.00 2.59
174 175 6.219417 TGAACAGTGTTCAAATTTGTGGAT 57.781 33.333 31.49 0.00 0.00 3.41
175 176 5.651387 TGAACAGTGTTCAAATTTGTGGA 57.349 34.783 31.49 8.51 0.00 4.02
176 177 6.041511 TCATGAACAGTGTTCAAATTTGTGG 58.958 36.000 35.44 19.41 31.55 4.17
177 178 6.753279 ACTCATGAACAGTGTTCAAATTTGTG 59.247 34.615 35.44 28.90 31.55 3.33
178 179 6.866480 ACTCATGAACAGTGTTCAAATTTGT 58.134 32.000 35.44 25.73 31.55 2.83
179 180 7.760131 AACTCATGAACAGTGTTCAAATTTG 57.240 32.000 35.44 28.55 31.55 2.32
180 181 8.776376 AAAACTCATGAACAGTGTTCAAATTT 57.224 26.923 35.44 27.46 31.55 1.82
181 182 9.868277 TTAAAACTCATGAACAGTGTTCAAATT 57.132 25.926 35.44 24.43 31.55 1.82
182 183 9.868277 TTTAAAACTCATGAACAGTGTTCAAAT 57.132 25.926 35.44 21.53 31.55 2.32
183 184 9.698309 TTTTAAAACTCATGAACAGTGTTCAAA 57.302 25.926 35.44 26.03 31.55 2.69
184 185 9.698309 TTTTTAAAACTCATGAACAGTGTTCAA 57.302 25.926 35.44 22.43 31.55 2.69
231 232 9.611284 CTCTCATTTTCATGAAATCGTAAACAA 57.389 29.630 21.10 3.92 39.04 2.83
232 233 8.783093 ACTCTCATTTTCATGAAATCGTAAACA 58.217 29.630 21.10 4.64 39.04 2.83
233 234 9.055248 CACTCTCATTTTCATGAAATCGTAAAC 57.945 33.333 21.10 0.00 39.04 2.01
234 235 8.998377 TCACTCTCATTTTCATGAAATCGTAAA 58.002 29.630 21.10 6.10 39.04 2.01
235 236 8.443160 GTCACTCTCATTTTCATGAAATCGTAA 58.557 33.333 21.10 6.83 39.04 3.18
236 237 7.602265 TGTCACTCTCATTTTCATGAAATCGTA 59.398 33.333 21.10 7.21 39.04 3.43
237 238 6.427853 TGTCACTCTCATTTTCATGAAATCGT 59.572 34.615 21.10 8.32 39.04 3.73
238 239 6.834876 TGTCACTCTCATTTTCATGAAATCG 58.165 36.000 21.10 14.77 39.04 3.34
239 240 6.746364 GCTGTCACTCTCATTTTCATGAAATC 59.254 38.462 21.10 3.97 39.04 2.17
240 241 6.618811 GCTGTCACTCTCATTTTCATGAAAT 58.381 36.000 21.10 9.11 39.04 2.17
241 242 5.334337 CGCTGTCACTCTCATTTTCATGAAA 60.334 40.000 16.91 16.91 39.04 2.69
242 243 4.152938 CGCTGTCACTCTCATTTTCATGAA 59.847 41.667 3.38 3.38 39.04 2.57
243 244 3.681417 CGCTGTCACTCTCATTTTCATGA 59.319 43.478 0.00 0.00 37.05 3.07
244 245 3.434641 ACGCTGTCACTCTCATTTTCATG 59.565 43.478 0.00 0.00 0.00 3.07
245 246 3.668447 ACGCTGTCACTCTCATTTTCAT 58.332 40.909 0.00 0.00 0.00 2.57
246 247 3.111853 ACGCTGTCACTCTCATTTTCA 57.888 42.857 0.00 0.00 0.00 2.69
247 248 4.238514 AGTACGCTGTCACTCTCATTTTC 58.761 43.478 0.00 0.00 0.00 2.29
248 249 4.238514 GAGTACGCTGTCACTCTCATTTT 58.761 43.478 0.00 0.00 38.50 1.82
249 250 3.670895 CGAGTACGCTGTCACTCTCATTT 60.671 47.826 0.00 0.00 39.23 2.32
250 251 2.159503 CGAGTACGCTGTCACTCTCATT 60.160 50.000 0.00 0.00 39.23 2.57
251 252 1.398739 CGAGTACGCTGTCACTCTCAT 59.601 52.381 0.00 0.00 39.23 2.90
252 253 0.796927 CGAGTACGCTGTCACTCTCA 59.203 55.000 0.00 0.00 39.23 3.27
253 254 0.097325 CCGAGTACGCTGTCACTCTC 59.903 60.000 0.00 0.00 39.23 3.20
254 255 1.924320 GCCGAGTACGCTGTCACTCT 61.924 60.000 0.00 0.00 39.23 3.24
255 256 1.514443 GCCGAGTACGCTGTCACTC 60.514 63.158 0.00 0.00 38.24 3.51
256 257 2.567049 GCCGAGTACGCTGTCACT 59.433 61.111 0.00 0.00 38.29 3.41
257 258 2.594119 ATCGCCGAGTACGCTGTCAC 62.594 60.000 0.00 0.00 38.29 3.67
258 259 2.404186 ATCGCCGAGTACGCTGTCA 61.404 57.895 0.00 0.00 38.29 3.58
259 260 1.939785 CATCGCCGAGTACGCTGTC 60.940 63.158 0.00 0.00 38.29 3.51
260 261 2.102357 CATCGCCGAGTACGCTGT 59.898 61.111 0.00 0.00 38.29 4.40
261 262 3.323136 GCATCGCCGAGTACGCTG 61.323 66.667 0.00 0.00 38.29 5.18
262 263 3.350909 TTGCATCGCCGAGTACGCT 62.351 57.895 0.00 0.00 38.29 5.07
263 264 2.883730 TTGCATCGCCGAGTACGC 60.884 61.111 0.00 0.00 38.29 4.42
264 265 1.348538 TTGTTGCATCGCCGAGTACG 61.349 55.000 0.00 0.00 39.43 3.67
265 266 0.793861 TTTGTTGCATCGCCGAGTAC 59.206 50.000 0.00 0.00 0.00 2.73
266 267 1.514003 TTTTGTTGCATCGCCGAGTA 58.486 45.000 0.00 0.00 0.00 2.59
267 268 0.881118 ATTTTGTTGCATCGCCGAGT 59.119 45.000 0.00 0.00 0.00 4.18
268 269 2.823196 TATTTTGTTGCATCGCCGAG 57.177 45.000 0.00 0.00 0.00 4.63
269 270 2.223456 CCATATTTTGTTGCATCGCCGA 60.223 45.455 0.00 0.00 0.00 5.54
270 271 2.118683 CCATATTTTGTTGCATCGCCG 58.881 47.619 0.00 0.00 0.00 6.46
271 272 3.115554 GACCATATTTTGTTGCATCGCC 58.884 45.455 0.00 0.00 0.00 5.54
272 273 3.768406 TGACCATATTTTGTTGCATCGC 58.232 40.909 0.00 0.00 0.00 4.58
273 274 4.741185 CCATGACCATATTTTGTTGCATCG 59.259 41.667 0.00 0.00 0.00 3.84
274 275 4.508861 GCCATGACCATATTTTGTTGCATC 59.491 41.667 0.00 0.00 0.00 3.91
275 276 4.162698 AGCCATGACCATATTTTGTTGCAT 59.837 37.500 0.00 0.00 0.00 3.96
276 277 3.514706 AGCCATGACCATATTTTGTTGCA 59.485 39.130 0.00 0.00 0.00 4.08
277 278 4.127566 AGCCATGACCATATTTTGTTGC 57.872 40.909 0.00 0.00 0.00 4.17
278 279 7.436080 GTCAATAGCCATGACCATATTTTGTTG 59.564 37.037 0.00 0.00 41.02 3.33
279 280 7.491682 GTCAATAGCCATGACCATATTTTGTT 58.508 34.615 0.00 0.00 41.02 2.83
280 281 6.238731 CGTCAATAGCCATGACCATATTTTGT 60.239 38.462 0.00 0.00 43.34 2.83
287 288 3.777106 ATCGTCAATAGCCATGACCAT 57.223 42.857 0.00 0.00 43.34 3.55
328 329 1.851658 AAAGGTTCATGCGTTGCAAC 58.148 45.000 19.89 19.89 43.62 4.17
336 337 6.620678 TGAAATACTAGCAAAAGGTTCATGC 58.379 36.000 0.00 0.00 40.34 4.06
367 369 7.123247 ACAGAAAATCCTAAATGTTCCATGAGG 59.877 37.037 0.00 0.00 0.00 3.86
460 462 6.811253 TGTCCGCTACACTTATTTTGAAAT 57.189 33.333 0.00 0.00 31.43 2.17
554 587 2.224549 TGTGCGTGTCCTTTTTATTCGG 59.775 45.455 0.00 0.00 0.00 4.30
647 708 0.999712 TCTTCCCCACCCAGAATTCC 59.000 55.000 0.65 0.00 0.00 3.01
648 709 3.053320 AGAATCTTCCCCACCCAGAATTC 60.053 47.826 0.00 0.00 0.00 2.17
680 741 2.853914 GTGCGCGTGGAAAGAGAC 59.146 61.111 8.43 0.00 0.00 3.36
769 836 2.094182 TGAATGAACTGCGGAGTACTCC 60.094 50.000 29.18 29.18 46.18 3.85
770 837 3.232213 TGAATGAACTGCGGAGTACTC 57.768 47.619 10.98 14.87 0.00 2.59
771 838 3.244078 TGTTGAATGAACTGCGGAGTACT 60.244 43.478 10.98 0.00 35.37 2.73
772 839 3.064207 TGTTGAATGAACTGCGGAGTAC 58.936 45.455 10.98 3.25 35.37 2.73
780 847 1.953686 ACGGGGTTGTTGAATGAACTG 59.046 47.619 0.00 0.00 35.37 3.16
973 1058 2.574929 CCACCCGCGTTACTGCTA 59.425 61.111 4.92 0.00 0.00 3.49
1183 1268 2.749441 GCTCTCTGGTTGGGCTGC 60.749 66.667 0.00 0.00 0.00 5.25
1184 1269 2.045536 GGCTCTCTGGTTGGGCTG 60.046 66.667 0.00 0.00 0.00 4.85
1189 1274 2.045536 GGCCTGGCTCTCTGGTTG 60.046 66.667 19.68 0.00 36.89 3.77
1190 1275 0.621571 TATGGCCTGGCTCTCTGGTT 60.622 55.000 19.68 0.00 36.89 3.67
1191 1276 1.003442 TATGGCCTGGCTCTCTGGT 59.997 57.895 19.68 0.00 36.89 4.00
1193 1278 1.071128 GCTATGGCCTGGCTCTCTG 59.929 63.158 19.68 6.74 0.00 3.35
1282 1370 1.229853 GGAGGGAGTGGAAGGGGAA 60.230 63.158 0.00 0.00 0.00 3.97
1286 1374 1.689892 GGAGTAGGAGGGAGTGGAAGG 60.690 61.905 0.00 0.00 0.00 3.46
1351 1443 2.046023 TCACAGCATTGCTCCCCG 60.046 61.111 8.54 0.00 36.40 5.73
1467 1565 2.587322 TAAAGGACAGCATCGGCCGG 62.587 60.000 27.83 11.74 42.56 6.13
1553 1651 1.995484 CACCGACTTGTGTGATGCTAG 59.005 52.381 0.00 0.00 34.37 3.42
1606 1704 6.257994 AGGAAGCCAGATGAATTGATCTTA 57.742 37.500 4.49 0.00 29.72 2.10
1607 1705 5.126699 AGGAAGCCAGATGAATTGATCTT 57.873 39.130 4.49 0.00 29.72 2.40
1645 1763 2.291540 CCCTCCCTTATTTGCCTGTTCA 60.292 50.000 0.00 0.00 0.00 3.18
1953 2078 4.776435 TTAATGCTGAGACCATCATCCA 57.224 40.909 0.00 0.00 37.28 3.41
2074 2211 2.572095 TATCACCACTCTTGCCGCCG 62.572 60.000 0.00 0.00 0.00 6.46
2075 2212 0.392461 TTATCACCACTCTTGCCGCC 60.392 55.000 0.00 0.00 0.00 6.13
2076 2213 0.727398 GTTATCACCACTCTTGCCGC 59.273 55.000 0.00 0.00 0.00 6.53
2344 2481 2.162681 GCAGTTAACTGGACCAGCAAT 58.837 47.619 31.42 10.56 43.94 3.56
2345 2482 1.142870 AGCAGTTAACTGGACCAGCAA 59.857 47.619 31.42 12.81 43.94 3.91
2346 2483 0.764890 AGCAGTTAACTGGACCAGCA 59.235 50.000 31.42 6.86 43.94 4.41
2347 2484 1.897560 AAGCAGTTAACTGGACCAGC 58.102 50.000 31.42 18.82 43.94 4.85
2348 2485 3.003480 GCTAAGCAGTTAACTGGACCAG 58.997 50.000 31.42 20.45 43.94 4.00
2349 2486 2.637872 AGCTAAGCAGTTAACTGGACCA 59.362 45.455 31.42 10.21 43.94 4.02
2350 2487 3.336138 AGCTAAGCAGTTAACTGGACC 57.664 47.619 31.42 17.99 43.94 4.46
2351 2488 3.120165 GCAAGCTAAGCAGTTAACTGGAC 60.120 47.826 31.42 18.63 43.94 4.02
2352 2489 3.074412 GCAAGCTAAGCAGTTAACTGGA 58.926 45.455 31.42 2.30 43.94 3.86
2353 2490 2.162408 GGCAAGCTAAGCAGTTAACTGG 59.838 50.000 31.42 18.47 43.94 4.00
2354 2491 2.813754 TGGCAAGCTAAGCAGTTAACTG 59.186 45.455 27.85 27.85 46.40 3.16
2355 2492 3.077359 CTGGCAAGCTAAGCAGTTAACT 58.923 45.455 1.12 1.12 0.00 2.24
2356 2493 3.074412 TCTGGCAAGCTAAGCAGTTAAC 58.926 45.455 12.48 0.00 0.00 2.01
2357 2494 3.417069 TCTGGCAAGCTAAGCAGTTAA 57.583 42.857 12.48 0.00 0.00 2.01
2358 2495 3.007940 TCTTCTGGCAAGCTAAGCAGTTA 59.992 43.478 12.48 0.00 0.00 2.24
2359 2496 2.157738 CTTCTGGCAAGCTAAGCAGTT 58.842 47.619 12.48 0.00 0.00 3.16
3013 3151 2.512485 TCACTGCATTGTTTGGCAAG 57.488 45.000 3.77 0.00 40.86 4.01
3268 3406 7.595819 TTTTGAAACAGGATTAACACCAGAT 57.404 32.000 3.82 0.00 0.00 2.90
3271 3409 6.983307 CACATTTTGAAACAGGATTAACACCA 59.017 34.615 3.82 0.00 0.00 4.17
3280 3418 4.558496 GCCGAATCACATTTTGAAACAGGA 60.558 41.667 0.00 0.00 37.92 3.86
3535 3673 8.000780 AGCAATAACTTTCATTGTATTCCCTC 57.999 34.615 0.00 0.00 36.08 4.30
3850 3988 1.176527 TGCTACCATTCAAAGCCAGC 58.823 50.000 0.00 0.00 35.33 4.85
4376 4515 5.860182 CCATTGTTTCAGACTGCTTATGTTG 59.140 40.000 0.00 0.00 0.00 3.33
4433 4572 1.416813 GCAGAGGTCTTCGCATGTCG 61.417 60.000 0.00 0.00 40.15 4.35
4961 5100 8.975439 CAGAAAGAGAAAATGTTGAAAGGAATG 58.025 33.333 0.00 0.00 0.00 2.67
5038 5177 4.705023 ACCATGTGCCCTTTTCTTATGTAC 59.295 41.667 0.00 0.00 0.00 2.90
5128 5268 4.677779 GCACCAAACCCACATAAAGCTATG 60.678 45.833 0.00 0.00 40.78 2.23
5137 5277 0.467290 AACGAGCACCAAACCCACAT 60.467 50.000 0.00 0.00 0.00 3.21
5249 5389 5.882557 AGCATAGGATGTTTGTACAAGGAAG 59.117 40.000 8.56 0.00 37.91 3.46
5465 5745 6.360681 GCACAACTTCACAATCAACAATACTC 59.639 38.462 0.00 0.00 0.00 2.59
5514 5794 6.122277 AGGAAACAAACATCAACTCTTCAGA 58.878 36.000 0.00 0.00 0.00 3.27
5537 5817 8.279970 TGTCAAGGATCACCAATGTAAATAAG 57.720 34.615 0.00 0.00 38.94 1.73
5571 5851 2.778299 AGTGTGCATTATTGGTGACGT 58.222 42.857 0.00 0.00 0.00 4.34
5621 5901 5.669798 ATGCTTCCTCCCATTTACCTAAT 57.330 39.130 0.00 0.00 0.00 1.73
5624 5904 3.628257 CCAATGCTTCCTCCCATTTACCT 60.628 47.826 0.00 0.00 29.71 3.08
5757 6037 8.668510 ATCTACAACCTGAGCATTTTATGTAG 57.331 34.615 0.00 0.00 40.01 2.74
5866 6148 3.706594 ACAGAGAGGCGATTTCTATCCAA 59.293 43.478 0.00 0.00 0.00 3.53
5896 6178 3.751175 TCTACTTGGCAAGTTGAATTCCG 59.249 43.478 35.13 14.64 42.81 4.30
5982 6264 4.868171 TGACACTGTTCTACTTCACAACAC 59.132 41.667 0.00 0.00 0.00 3.32
6000 6282 6.143438 CAGCAAGAGAAATCAAAACATGACAC 59.857 38.462 0.00 0.00 41.93 3.67
6028 6310 4.391155 ACGGCCATACAACTTAAACTTCA 58.609 39.130 2.24 0.00 0.00 3.02
6156 6445 3.256383 TCTTTGCAATCACATGGACAAGG 59.744 43.478 0.00 0.00 0.00 3.61
6178 6467 8.943085 ACCATTGAAAGGAGATTACATATCTCT 58.057 33.333 12.90 0.00 43.00 3.10
6194 6483 4.099266 TGACAGGACCAAAACCATTGAAAG 59.901 41.667 0.00 0.00 0.00 2.62
6343 6634 7.954666 ATGAAGTAGCTCTCTTTCTCTTAGT 57.045 36.000 0.00 0.00 0.00 2.24
6376 6667 3.691342 TCCGGCTGACCTGTTCCG 61.691 66.667 0.00 0.00 41.41 4.30
6391 6682 0.250901 ACTGCCATCAGGTGTTGTCC 60.251 55.000 0.00 0.00 44.54 4.02
6453 6746 1.915614 CTTGCATCGCTGGCGTTTCT 61.916 55.000 14.55 0.00 40.74 2.52
6478 6771 1.476085 CAGACAAGCCAACACCAACAA 59.524 47.619 0.00 0.00 0.00 2.83
6593 6886 6.574832 CCATCGCAAAATAGAATCGTGTATTG 59.425 38.462 0.00 0.00 0.00 1.90
6612 6905 1.267806 CACAATAGCCAATCCCATCGC 59.732 52.381 0.00 0.00 0.00 4.58
6737 7030 2.953466 TACAGTATGCCTCACGAACC 57.047 50.000 0.00 0.00 42.53 3.62
6738 7031 3.782046 ACATACAGTATGCCTCACGAAC 58.218 45.455 18.99 0.00 42.53 3.95
6752 7045 5.338365 GGACCGAGTGTTTAGTACATACAG 58.662 45.833 0.00 0.00 39.39 2.74
6774 7071 1.219124 CACCACTCACAGGATCCGG 59.781 63.158 10.69 10.69 0.00 5.14
6900 7198 4.728780 GGGGGCAGTCTATCTGGA 57.271 61.111 0.00 0.00 43.78 3.86
6919 7217 4.019174 AGCAAACCCAGATCAATGGTAAG 58.981 43.478 0.00 0.00 38.81 2.34
6921 7219 3.737559 AGCAAACCCAGATCAATGGTA 57.262 42.857 0.00 0.00 38.81 3.25
6922 7220 2.564062 CAAGCAAACCCAGATCAATGGT 59.436 45.455 0.00 0.00 38.81 3.55
6924 7222 2.675889 GCCAAGCAAACCCAGATCAATG 60.676 50.000 0.00 0.00 0.00 2.82
6925 7223 1.551883 GCCAAGCAAACCCAGATCAAT 59.448 47.619 0.00 0.00 0.00 2.57
6927 7225 0.112995 AGCCAAGCAAACCCAGATCA 59.887 50.000 0.00 0.00 0.00 2.92
6928 7226 2.128771 TAGCCAAGCAAACCCAGATC 57.871 50.000 0.00 0.00 0.00 2.75
6929 7227 2.603075 TTAGCCAAGCAAACCCAGAT 57.397 45.000 0.00 0.00 0.00 2.90
6930 7228 2.603075 ATTAGCCAAGCAAACCCAGA 57.397 45.000 0.00 0.00 0.00 3.86
6931 7229 2.562298 TGAATTAGCCAAGCAAACCCAG 59.438 45.455 0.00 0.00 0.00 4.45
6932 7230 2.603021 TGAATTAGCCAAGCAAACCCA 58.397 42.857 0.00 0.00 0.00 4.51
6962 7261 5.899547 TGAAGATAGGGAGAGATAGCAACAA 59.100 40.000 0.00 0.00 0.00 2.83
6969 7268 8.001300 TGTTATCCTGAAGATAGGGAGAGATA 57.999 38.462 0.00 0.00 38.69 1.98
6976 7275 8.429237 AGACTATTGTTATCCTGAAGATAGGG 57.571 38.462 0.00 0.00 38.69 3.53
6998 7297 6.471146 AGCATTACATGATGATTAGGGAGAC 58.529 40.000 0.00 0.00 0.00 3.36
7011 7310 5.243207 CAGCATGGAGATAGCATTACATGA 58.757 41.667 0.00 0.00 38.29 3.07
7023 7322 2.130193 TCCCTTTAGCAGCATGGAGAT 58.870 47.619 0.00 0.00 35.86 2.75
7027 7326 1.952296 GTGATCCCTTTAGCAGCATGG 59.048 52.381 0.00 0.00 35.86 3.66
7042 7341 4.883585 TCAAACATTATGGCTCCTGTGATC 59.116 41.667 0.00 0.00 0.00 2.92
7066 7365 6.114767 TGAATCTGATTGTGCTGCTGTTATA 58.885 36.000 7.78 0.00 0.00 0.98
7117 7416 4.566488 CCATTGGGCTGAAGACTACTCTTT 60.566 45.833 0.00 0.00 36.82 2.52
7142 7441 1.966451 GGCTAAGGCTTGTGCGTGT 60.966 57.895 10.69 0.00 40.82 4.49
7143 7442 1.639298 GAGGCTAAGGCTTGTGCGTG 61.639 60.000 20.78 3.44 38.98 5.34
7144 7443 1.376037 GAGGCTAAGGCTTGTGCGT 60.376 57.895 10.69 14.98 38.98 5.24
7145 7444 2.109126 GGAGGCTAAGGCTTGTGCG 61.109 63.158 10.69 0.00 38.98 5.34
7154 7453 2.497675 TGCTAGTGTTGAGGAGGCTAAG 59.502 50.000 0.00 0.00 0.00 2.18
7156 7455 1.825474 GTGCTAGTGTTGAGGAGGCTA 59.175 52.381 0.00 0.00 0.00 3.93
7177 7476 1.203013 AGGGTGTAAAACTCCTTGCCC 60.203 52.381 0.00 0.00 32.60 5.36
7182 7481 4.461198 CAAGTTGAGGGTGTAAAACTCCT 58.539 43.478 0.00 0.00 31.81 3.69
7187 7486 4.237976 TGTCCAAGTTGAGGGTGTAAAA 57.762 40.909 3.87 0.00 0.00 1.52
7188 7487 3.935818 TGTCCAAGTTGAGGGTGTAAA 57.064 42.857 3.87 0.00 0.00 2.01
7189 7488 3.935818 TTGTCCAAGTTGAGGGTGTAA 57.064 42.857 3.87 0.00 0.00 2.41
7190 7489 3.935818 TTTGTCCAAGTTGAGGGTGTA 57.064 42.857 3.87 0.00 0.00 2.90
7191 7490 2.818751 TTTGTCCAAGTTGAGGGTGT 57.181 45.000 3.87 0.00 0.00 4.16
7192 7491 2.558359 GGATTTGTCCAAGTTGAGGGTG 59.442 50.000 3.87 0.00 0.00 4.61
7193 7492 2.447047 AGGATTTGTCCAAGTTGAGGGT 59.553 45.455 3.87 0.00 0.00 4.34
7194 7493 3.084786 GAGGATTTGTCCAAGTTGAGGG 58.915 50.000 3.87 0.00 0.00 4.30
7195 7494 3.084786 GGAGGATTTGTCCAAGTTGAGG 58.915 50.000 3.87 0.00 33.84 3.86
7196 7495 3.084786 GGGAGGATTTGTCCAAGTTGAG 58.915 50.000 3.87 0.00 35.57 3.02
7197 7496 2.445145 TGGGAGGATTTGTCCAAGTTGA 59.555 45.455 3.87 0.00 35.57 3.18
7198 7497 2.875296 TGGGAGGATTTGTCCAAGTTG 58.125 47.619 0.00 0.00 35.57 3.16
7199 7498 3.181418 ACATGGGAGGATTTGTCCAAGTT 60.181 43.478 0.00 0.00 35.57 2.66
7200 7499 2.379907 ACATGGGAGGATTTGTCCAAGT 59.620 45.455 0.00 0.00 35.57 3.16
7201 7500 3.091633 ACATGGGAGGATTTGTCCAAG 57.908 47.619 0.00 0.00 35.57 3.61
7202 7501 3.430453 GAACATGGGAGGATTTGTCCAA 58.570 45.455 0.00 0.00 35.57 3.53
7203 7502 2.291540 GGAACATGGGAGGATTTGTCCA 60.292 50.000 0.00 0.00 35.57 4.02
7204 7503 2.024941 AGGAACATGGGAGGATTTGTCC 60.025 50.000 0.00 0.00 0.00 4.02
7205 7504 3.372440 AGGAACATGGGAGGATTTGTC 57.628 47.619 0.00 0.00 0.00 3.18
7206 7505 5.073691 CCTATAGGAACATGGGAGGATTTGT 59.926 44.000 14.11 0.00 37.39 2.83
7207 7506 5.310594 TCCTATAGGAACATGGGAGGATTTG 59.689 44.000 19.59 0.00 42.18 2.32
7208 7507 5.486332 TCCTATAGGAACATGGGAGGATTT 58.514 41.667 19.59 0.00 42.18 2.17
7209 7508 5.106631 TCCTATAGGAACATGGGAGGATT 57.893 43.478 19.59 0.00 42.18 3.01
7210 7509 4.785173 TCCTATAGGAACATGGGAGGAT 57.215 45.455 19.59 0.00 42.18 3.24
7223 7522 3.326747 GCTACCAAACGCATCCTATAGG 58.673 50.000 13.07 13.07 0.00 2.57
7224 7523 3.326747 GGCTACCAAACGCATCCTATAG 58.673 50.000 0.00 0.00 0.00 1.31
7225 7524 2.038033 GGGCTACCAAACGCATCCTATA 59.962 50.000 0.00 0.00 36.50 1.31
7226 7525 1.202770 GGGCTACCAAACGCATCCTAT 60.203 52.381 0.00 0.00 36.50 2.57
7227 7526 0.179468 GGGCTACCAAACGCATCCTA 59.821 55.000 0.00 0.00 36.50 2.94
7228 7527 1.077716 GGGCTACCAAACGCATCCT 60.078 57.895 0.00 0.00 36.50 3.24
7229 7528 2.469516 CGGGCTACCAAACGCATCC 61.470 63.158 0.00 0.00 36.13 3.51
7230 7529 3.098555 CGGGCTACCAAACGCATC 58.901 61.111 0.00 0.00 36.13 3.91
7234 7533 1.796459 GTATATGCGGGCTACCAAACG 59.204 52.381 0.00 0.00 36.13 3.60
7235 7534 2.148768 GGTATATGCGGGCTACCAAAC 58.851 52.381 3.49 0.00 35.90 2.93
7236 7535 1.072648 GGGTATATGCGGGCTACCAAA 59.927 52.381 9.08 0.00 37.28 3.28
7237 7536 0.688487 GGGTATATGCGGGCTACCAA 59.312 55.000 9.08 0.00 37.28 3.67
7238 7537 1.196104 GGGGTATATGCGGGCTACCA 61.196 60.000 9.08 0.00 37.28 3.25
7239 7538 1.196104 TGGGGTATATGCGGGCTACC 61.196 60.000 0.32 0.32 35.24 3.18
7240 7539 0.249398 CTGGGGTATATGCGGGCTAC 59.751 60.000 0.00 0.00 0.00 3.58
7241 7540 1.550130 GCTGGGGTATATGCGGGCTA 61.550 60.000 0.00 0.00 0.00 3.93
7242 7541 2.895424 GCTGGGGTATATGCGGGCT 61.895 63.158 0.00 0.00 0.00 5.19
7243 7542 2.359975 GCTGGGGTATATGCGGGC 60.360 66.667 0.00 0.00 0.00 6.13
7244 7543 2.351276 GGCTGGGGTATATGCGGG 59.649 66.667 0.00 0.00 0.00 6.13
7245 7544 1.003355 CTGGCTGGGGTATATGCGG 60.003 63.158 0.00 0.00 0.00 5.69
7246 7545 1.003355 CCTGGCTGGGGTATATGCG 60.003 63.158 1.84 0.00 0.00 4.73
7247 7546 1.303643 GCCTGGCTGGGGTATATGC 60.304 63.158 12.43 0.00 36.00 3.14
7248 7547 1.380302 GGCCTGGCTGGGGTATATG 59.620 63.158 19.68 0.00 36.00 1.78
7249 7548 1.852626 GGGCCTGGCTGGGGTATAT 60.853 63.158 19.68 0.00 36.00 0.86
7250 7549 2.449714 GGGCCTGGCTGGGGTATA 60.450 66.667 19.68 0.00 36.00 1.47
7286 7585 1.451067 TAATGCGGTAACCAAACGGG 58.549 50.000 0.00 0.00 44.81 5.28
7287 7586 3.430931 CAATAATGCGGTAACCAAACGG 58.569 45.455 0.00 0.00 0.00 4.44
7288 7587 3.430931 CCAATAATGCGGTAACCAAACG 58.569 45.455 0.00 0.00 0.00 3.60
7289 7588 3.193903 ACCCAATAATGCGGTAACCAAAC 59.806 43.478 0.00 0.00 31.00 2.93
7290 7589 3.432378 ACCCAATAATGCGGTAACCAAA 58.568 40.909 0.00 0.00 31.00 3.28
7291 7590 3.018149 GACCCAATAATGCGGTAACCAA 58.982 45.455 0.00 0.00 32.37 3.67
7292 7591 2.240160 AGACCCAATAATGCGGTAACCA 59.760 45.455 0.00 0.00 32.37 3.67
7293 7592 2.616842 CAGACCCAATAATGCGGTAACC 59.383 50.000 0.00 0.00 32.37 2.85
7294 7593 2.032924 GCAGACCCAATAATGCGGTAAC 59.967 50.000 0.00 0.00 32.37 2.50
7295 7594 2.294074 GCAGACCCAATAATGCGGTAA 58.706 47.619 0.00 0.00 32.37 2.85
7296 7595 1.210722 TGCAGACCCAATAATGCGGTA 59.789 47.619 0.00 0.00 41.58 4.02
7297 7596 0.034574 TGCAGACCCAATAATGCGGT 60.035 50.000 0.00 0.00 41.58 5.68
7298 7597 1.321474 ATGCAGACCCAATAATGCGG 58.679 50.000 0.00 0.00 41.58 5.69
7299 7598 2.095567 GCTATGCAGACCCAATAATGCG 60.096 50.000 0.00 0.00 41.58 4.73
7300 7599 2.886523 TGCTATGCAGACCCAATAATGC 59.113 45.455 0.00 0.00 39.14 3.56
7301 7600 3.884693 TGTGCTATGCAGACCCAATAATG 59.115 43.478 0.00 0.00 40.08 1.90
7302 7601 4.169059 TGTGCTATGCAGACCCAATAAT 57.831 40.909 0.00 0.00 40.08 1.28
7303 7602 3.643199 TGTGCTATGCAGACCCAATAA 57.357 42.857 0.00 0.00 40.08 1.40
7304 7603 3.643199 TTGTGCTATGCAGACCCAATA 57.357 42.857 0.00 0.00 40.08 1.90
7305 7604 2.512692 TTGTGCTATGCAGACCCAAT 57.487 45.000 0.00 0.00 40.08 3.16
7306 7605 2.284754 TTTGTGCTATGCAGACCCAA 57.715 45.000 0.00 0.00 40.08 4.12
7307 7606 2.512692 ATTTGTGCTATGCAGACCCA 57.487 45.000 0.00 0.00 40.08 4.51
7308 7607 3.874392 AAATTTGTGCTATGCAGACCC 57.126 42.857 0.00 0.00 40.08 4.46
7309 7608 6.183360 GCTTTAAAATTTGTGCTATGCAGACC 60.183 38.462 0.00 0.00 40.08 3.85
7310 7609 6.365789 TGCTTTAAAATTTGTGCTATGCAGAC 59.634 34.615 0.00 0.00 40.08 3.51
7311 7610 6.365789 GTGCTTTAAAATTTGTGCTATGCAGA 59.634 34.615 0.00 0.00 40.08 4.26
7312 7611 6.401367 GGTGCTTTAAAATTTGTGCTATGCAG 60.401 38.462 0.00 0.00 40.08 4.41
7313 7612 5.407995 GGTGCTTTAAAATTTGTGCTATGCA 59.592 36.000 0.00 0.00 35.60 3.96
7314 7613 5.639082 AGGTGCTTTAAAATTTGTGCTATGC 59.361 36.000 0.00 0.00 0.00 3.14
7315 7614 7.062605 CAGAGGTGCTTTAAAATTTGTGCTATG 59.937 37.037 0.00 0.00 0.00 2.23
7316 7615 7.092716 CAGAGGTGCTTTAAAATTTGTGCTAT 58.907 34.615 0.00 0.00 0.00 2.97
7317 7616 6.040391 ACAGAGGTGCTTTAAAATTTGTGCTA 59.960 34.615 0.00 0.00 0.00 3.49
7318 7617 5.163416 ACAGAGGTGCTTTAAAATTTGTGCT 60.163 36.000 0.00 0.00 0.00 4.40
7319 7618 5.049828 ACAGAGGTGCTTTAAAATTTGTGC 58.950 37.500 0.00 0.00 0.00 4.57
7320 7619 5.463061 CCACAGAGGTGCTTTAAAATTTGTG 59.537 40.000 0.00 0.00 43.88 3.33
7321 7620 5.453198 CCCACAGAGGTGCTTTAAAATTTGT 60.453 40.000 0.00 0.00 43.88 2.83
7322 7621 4.990426 CCCACAGAGGTGCTTTAAAATTTG 59.010 41.667 0.00 0.00 43.88 2.32
7323 7622 4.503123 GCCCACAGAGGTGCTTTAAAATTT 60.503 41.667 0.00 0.00 43.88 1.82
7324 7623 3.006859 GCCCACAGAGGTGCTTTAAAATT 59.993 43.478 0.00 0.00 43.88 1.82
7325 7624 2.562738 GCCCACAGAGGTGCTTTAAAAT 59.437 45.455 0.00 0.00 43.88 1.82
7326 7625 1.960689 GCCCACAGAGGTGCTTTAAAA 59.039 47.619 0.00 0.00 43.88 1.52
7327 7626 1.616159 GCCCACAGAGGTGCTTTAAA 58.384 50.000 0.00 0.00 43.88 1.52
7328 7627 0.251165 GGCCCACAGAGGTGCTTTAA 60.251 55.000 0.00 0.00 43.88 1.52
7329 7628 1.133809 AGGCCCACAGAGGTGCTTTA 61.134 55.000 0.00 0.00 43.88 1.85
7330 7629 2.116125 GGCCCACAGAGGTGCTTT 59.884 61.111 0.00 0.00 43.88 3.51
7331 7630 2.856000 AGGCCCACAGAGGTGCTT 60.856 61.111 0.00 0.00 43.88 3.91
7332 7631 3.644606 CAGGCCCACAGAGGTGCT 61.645 66.667 0.00 0.00 43.88 4.40
7334 7633 3.278072 ATGCAGGCCCACAGAGGTG 62.278 63.158 0.00 0.00 44.85 4.00
7335 7634 2.937689 ATGCAGGCCCACAGAGGT 60.938 61.111 0.00 0.00 34.66 3.85
7336 7635 2.124403 GATGCAGGCCCACAGAGG 60.124 66.667 0.00 0.00 37.03 3.69
7337 7636 2.124403 GGATGCAGGCCCACAGAG 60.124 66.667 0.00 0.00 0.00 3.35
7338 7637 2.934932 TGGATGCAGGCCCACAGA 60.935 61.111 0.00 0.00 0.00 3.41
7339 7638 2.439701 CTGGATGCAGGCCCACAG 60.440 66.667 6.28 0.00 0.00 3.66
7340 7639 2.934932 TCTGGATGCAGGCCCACA 60.935 61.111 14.84 0.00 0.00 4.17
7341 7640 2.124403 CTCTGGATGCAGGCCCAC 60.124 66.667 14.84 0.00 0.00 4.61
7342 7641 3.414193 CCTCTGGATGCAGGCCCA 61.414 66.667 14.84 5.64 0.00 5.36
7343 7642 2.683465 TTCCTCTGGATGCAGGCCC 61.683 63.158 14.84 1.16 0.00 5.80
7344 7643 1.452833 GTTCCTCTGGATGCAGGCC 60.453 63.158 14.84 0.00 0.00 5.19
7345 7644 1.028868 GTGTTCCTCTGGATGCAGGC 61.029 60.000 14.84 1.22 0.00 4.85
7346 7645 0.617413 AGTGTTCCTCTGGATGCAGG 59.383 55.000 14.84 5.13 0.00 4.85
7347 7646 1.277273 TGAGTGTTCCTCTGGATGCAG 59.723 52.381 8.12 8.12 41.11 4.41
7348 7647 1.351076 TGAGTGTTCCTCTGGATGCA 58.649 50.000 0.00 0.00 41.11 3.96
7349 7648 2.479566 TTGAGTGTTCCTCTGGATGC 57.520 50.000 0.00 0.00 41.11 3.91
7350 7649 4.634883 CAGATTTGAGTGTTCCTCTGGATG 59.365 45.833 0.00 0.00 41.11 3.51
7351 7650 4.841422 CAGATTTGAGTGTTCCTCTGGAT 58.159 43.478 0.00 0.00 41.11 3.41
7352 7651 3.557898 GCAGATTTGAGTGTTCCTCTGGA 60.558 47.826 0.00 0.00 41.11 3.86
7353 7652 2.746362 GCAGATTTGAGTGTTCCTCTGG 59.254 50.000 0.00 0.00 41.11 3.86
7354 7653 2.746362 GGCAGATTTGAGTGTTCCTCTG 59.254 50.000 0.00 0.00 41.11 3.35
7355 7654 2.613977 CGGCAGATTTGAGTGTTCCTCT 60.614 50.000 0.00 0.00 41.11 3.69
7356 7655 1.734465 CGGCAGATTTGAGTGTTCCTC 59.266 52.381 0.00 0.00 40.89 3.71
7357 7656 1.072331 ACGGCAGATTTGAGTGTTCCT 59.928 47.619 0.00 0.00 0.00 3.36
7358 7657 1.523758 ACGGCAGATTTGAGTGTTCC 58.476 50.000 0.00 0.00 0.00 3.62
7359 7658 3.626028 AAACGGCAGATTTGAGTGTTC 57.374 42.857 0.00 0.00 0.00 3.18
7360 7659 4.385358 AAAAACGGCAGATTTGAGTGTT 57.615 36.364 0.00 0.00 0.00 3.32
7361 7660 5.460646 CATAAAAACGGCAGATTTGAGTGT 58.539 37.500 0.00 0.00 0.00 3.55
7362 7661 4.858692 CCATAAAAACGGCAGATTTGAGTG 59.141 41.667 0.00 0.00 0.00 3.51
7363 7662 4.764823 TCCATAAAAACGGCAGATTTGAGT 59.235 37.500 0.00 0.00 0.00 3.41
7364 7663 5.309323 TCCATAAAAACGGCAGATTTGAG 57.691 39.130 0.00 0.00 0.00 3.02
7365 7664 4.157656 CCTCCATAAAAACGGCAGATTTGA 59.842 41.667 0.00 0.00 0.00 2.69
7366 7665 4.423732 CCTCCATAAAAACGGCAGATTTG 58.576 43.478 0.00 0.00 0.00 2.32
7367 7666 3.119137 GCCTCCATAAAAACGGCAGATTT 60.119 43.478 0.00 0.00 40.41 2.17
7368 7667 2.427095 GCCTCCATAAAAACGGCAGATT 59.573 45.455 0.00 0.00 40.41 2.40
7369 7668 2.024414 GCCTCCATAAAAACGGCAGAT 58.976 47.619 0.00 0.00 40.41 2.90
7370 7669 1.271652 TGCCTCCATAAAAACGGCAGA 60.272 47.619 0.00 0.00 45.08 4.26
7371 7670 1.173043 TGCCTCCATAAAAACGGCAG 58.827 50.000 0.00 0.00 45.08 4.85
7373 7672 0.455815 CCTGCCTCCATAAAAACGGC 59.544 55.000 0.00 0.00 41.06 5.68
7374 7673 0.455815 GCCTGCCTCCATAAAAACGG 59.544 55.000 0.00 0.00 0.00 4.44
7375 7674 0.455815 GGCCTGCCTCCATAAAAACG 59.544 55.000 0.00 0.00 0.00 3.60
7376 7675 0.824109 GGGCCTGCCTCCATAAAAAC 59.176 55.000 8.29 0.00 36.10 2.43
7377 7676 0.682855 CGGGCCTGCCTCCATAAAAA 60.683 55.000 8.29 0.00 36.10 1.94
7378 7677 1.077068 CGGGCCTGCCTCCATAAAA 60.077 57.895 8.29 0.00 36.10 1.52
7379 7678 1.983119 CTCGGGCCTGCCTCCATAAA 61.983 60.000 6.73 0.00 36.10 1.40
7380 7679 2.366301 TCGGGCCTGCCTCCATAA 60.366 61.111 6.73 0.00 36.10 1.90
7381 7680 2.844362 CTCGGGCCTGCCTCCATA 60.844 66.667 6.73 0.00 36.10 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.