Multiple sequence alignment - TraesCS3B01G339900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G339900 chr3B 100.000 4740 0 0 1 4740 545705652 545710391 0.000000e+00 8754
1 TraesCS3B01G339900 chr3B 97.145 4483 124 4 1 4482 292883112 292887591 0.000000e+00 7566
2 TraesCS3B01G339900 chr5B 97.817 4490 91 6 1 4487 663247961 663243476 0.000000e+00 7742
3 TraesCS3B01G339900 chr2A 97.769 4483 96 4 1 4482 761131635 761136114 0.000000e+00 7721
4 TraesCS3B01G339900 chr6B 97.569 4484 98 5 1 4482 522436848 522432374 0.000000e+00 7666
5 TraesCS3B01G339900 chr6B 97.293 3583 94 3 1 3582 49682118 49678538 0.000000e+00 6076
6 TraesCS3B01G339900 chr6B 94.624 465 24 1 1052 1515 29510578 29511042 0.000000e+00 719
7 TraesCS3B01G339900 chr1B 97.503 4485 107 5 1 4482 37922658 37918176 0.000000e+00 7657
8 TraesCS3B01G339900 chr1B 92.593 1053 73 3 1 1050 31636340 31635290 0.000000e+00 1507
9 TraesCS3B01G339900 chr1B 89.272 261 24 3 4482 4740 353062281 353062539 1.650000e-84 324
10 TraesCS3B01G339900 chr5A 96.522 2703 86 6 1785 4482 149693846 149691147 0.000000e+00 4464
11 TraesCS3B01G339900 chr5A 96.521 2702 86 6 1785 4482 522675296 522672599 0.000000e+00 4462
12 TraesCS3B01G339900 chr5A 98.195 277 5 0 1513 1789 149694662 149694386 7.130000e-133 484
13 TraesCS3B01G339900 chr5A 97.473 277 7 0 1513 1789 522676113 522675837 1.540000e-129 473
14 TraesCS3B01G339900 chr1A 95.495 2708 112 8 1785 4486 565926224 565928927 0.000000e+00 4316
15 TraesCS3B01G339900 chr1A 96.786 280 9 0 1510 1789 565925404 565925683 7.180000e-128 468
16 TraesCS3B01G339900 chr2B 90.580 1051 61 15 1 1050 6773480 6772467 0.000000e+00 1358
17 TraesCS3B01G339900 chr2B 90.390 1051 64 17 1 1050 6908913 6907899 0.000000e+00 1347
18 TraesCS3B01G339900 chr7B 94.409 465 25 1 1052 1515 699808841 699808377 0.000000e+00 713
19 TraesCS3B01G339900 chr7B 93.118 465 31 1 1052 1515 646000990 646000526 0.000000e+00 680
20 TraesCS3B01G339900 chr7B 90.734 259 24 0 4482 4740 135008257 135008515 3.510000e-91 346
21 TraesCS3B01G339900 chr7B 89.494 257 27 0 4482 4738 504070279 504070023 4.570000e-85 326
22 TraesCS3B01G339900 chr4B 91.506 259 22 0 4482 4740 513818207 513818465 1.620000e-94 357
23 TraesCS3B01G339900 chr4B 89.575 259 27 0 4482 4740 83657681 83657939 3.540000e-86 329
24 TraesCS3B01G339900 chr4B 89.804 255 26 0 4486 4740 426852180 426851926 1.270000e-85 327
25 TraesCS3B01G339900 chr4B 89.575 259 26 1 4482 4740 444704736 444704993 1.270000e-85 327
26 TraesCS3B01G339900 chr4B 89.189 259 28 0 4482 4740 458080662 458080920 1.650000e-84 324
27 TraesCS3B01G339900 chr1D 89.535 258 27 0 4482 4739 211056028 211055771 1.270000e-85 327


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G339900 chr3B 545705652 545710391 4739 False 8754.0 8754 100.0000 1 4740 1 chr3B.!!$F2 4739
1 TraesCS3B01G339900 chr3B 292883112 292887591 4479 False 7566.0 7566 97.1450 1 4482 1 chr3B.!!$F1 4481
2 TraesCS3B01G339900 chr5B 663243476 663247961 4485 True 7742.0 7742 97.8170 1 4487 1 chr5B.!!$R1 4486
3 TraesCS3B01G339900 chr2A 761131635 761136114 4479 False 7721.0 7721 97.7690 1 4482 1 chr2A.!!$F1 4481
4 TraesCS3B01G339900 chr6B 522432374 522436848 4474 True 7666.0 7666 97.5690 1 4482 1 chr6B.!!$R2 4481
5 TraesCS3B01G339900 chr6B 49678538 49682118 3580 True 6076.0 6076 97.2930 1 3582 1 chr6B.!!$R1 3581
6 TraesCS3B01G339900 chr1B 37918176 37922658 4482 True 7657.0 7657 97.5030 1 4482 1 chr1B.!!$R2 4481
7 TraesCS3B01G339900 chr1B 31635290 31636340 1050 True 1507.0 1507 92.5930 1 1050 1 chr1B.!!$R1 1049
8 TraesCS3B01G339900 chr5A 149691147 149694662 3515 True 2474.0 4464 97.3585 1513 4482 2 chr5A.!!$R1 2969
9 TraesCS3B01G339900 chr5A 522672599 522676113 3514 True 2467.5 4462 96.9970 1513 4482 2 chr5A.!!$R2 2969
10 TraesCS3B01G339900 chr1A 565925404 565928927 3523 False 2392.0 4316 96.1405 1510 4486 2 chr1A.!!$F1 2976
11 TraesCS3B01G339900 chr2B 6772467 6773480 1013 True 1358.0 1358 90.5800 1 1050 1 chr2B.!!$R1 1049
12 TraesCS3B01G339900 chr2B 6907899 6908913 1014 True 1347.0 1347 90.3900 1 1050 1 chr2B.!!$R2 1049

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
581 585 2.219458 TCTAGCCGATCTGAACCGTAG 58.781 52.381 0.00 0.45 0.00 3.51 F
1481 1490 0.549950 CTGGATGGATGGAACTGCCT 59.450 55.000 0.00 0.00 37.63 4.75 F
2226 3326 2.099263 GACATCGACGAGGAGGAAATCA 59.901 50.000 17.43 0.00 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2508 3608 1.904287 AAACCGAAACTGCATAGCCA 58.096 45.0 0.0 0.0 0.00 4.75 R
2608 3708 0.394938 TCGCTGCCCTAAACAGTCAA 59.605 50.0 0.0 0.0 37.47 3.18 R
4219 5326 0.321346 TGGCACAAGATTCAGCTCGA 59.679 50.0 0.0 0.0 31.92 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
440 444 7.646922 TGTGCCATTTTGCAAAATATTTTTGAC 59.353 29.630 31.33 20.89 44.11 3.18
580 584 2.336945 TCTAGCCGATCTGAACCGTA 57.663 50.000 0.00 0.00 0.00 4.02
581 585 2.219458 TCTAGCCGATCTGAACCGTAG 58.781 52.381 0.00 0.45 0.00 3.51
1019 1027 3.728373 GGTGATGGGGGTCGCCTT 61.728 66.667 5.82 0.00 43.78 4.35
1240 1249 2.954318 CCCGATTCTCAGGATTTTGCAT 59.046 45.455 0.00 0.00 0.00 3.96
1481 1490 0.549950 CTGGATGGATGGAACTGCCT 59.450 55.000 0.00 0.00 37.63 4.75
1613 1622 3.403038 GCTTGCTAGACAAACTTCCAGA 58.597 45.455 0.00 0.00 37.96 3.86
1668 1677 8.100791 ACAAAGTAAATGACATAACTGCTCCTA 58.899 33.333 4.57 0.00 0.00 2.94
1681 1690 3.262420 CTGCTCCTACACGTAGCATTTT 58.738 45.455 10.20 0.00 44.69 1.82
1722 1731 7.955918 AGAACAGAGCAATGTTTCCTTTATTT 58.044 30.769 7.84 0.00 43.32 1.40
1861 2960 3.499338 TGGTTTGAGTGCCATGAAGAAT 58.501 40.909 0.00 0.00 0.00 2.40
2043 3143 7.403231 ACGTCATATATTTAGGAATGGAGGGAT 59.597 37.037 0.00 0.00 0.00 3.85
2226 3326 2.099263 GACATCGACGAGGAGGAAATCA 59.901 50.000 17.43 0.00 0.00 2.57
2304 3404 5.864418 TGTAGTCTAGTTTCTGTTGTGGT 57.136 39.130 0.00 0.00 0.00 4.16
2348 3448 4.802248 GCCTGATTGATGAGGTCCTGTATC 60.802 50.000 0.00 0.67 33.33 2.24
2393 3493 9.745018 ATATCATATTTGTTCCTTCCTGTATGG 57.255 33.333 0.00 0.00 37.10 2.74
2399 3499 3.245229 TGTTCCTTCCTGTATGGTGCATT 60.245 43.478 0.00 0.00 37.07 3.56
2523 3623 3.722147 ACTAGATGGCTATGCAGTTTCG 58.278 45.455 0.00 0.00 0.00 3.46
2794 3894 6.548622 AGTTTGCTGTCCAGAAATATATGCAT 59.451 34.615 3.79 3.79 0.00 3.96
2796 3896 5.623169 TGCTGTCCAGAAATATATGCATGA 58.377 37.500 10.16 0.00 0.00 3.07
3095 4199 2.025981 TGCCCAAGTACAAGCAGATCAT 60.026 45.455 0.00 0.00 0.00 2.45
3416 4520 4.154942 GGATTTGATATGGCCATCTGGTT 58.845 43.478 24.80 0.00 37.57 3.67
3799 4903 5.356751 TGCCACCAGTCATGTTAATATTCAC 59.643 40.000 0.00 0.00 0.00 3.18
4015 5121 6.901300 ACTGACAAGTGGGACCTAATTAGATA 59.099 38.462 14.28 0.00 34.48 1.98
4164 5270 4.620982 CTGACCAAAATGAACAGGGAAAC 58.379 43.478 0.00 0.00 0.00 2.78
4219 5326 4.592778 GCCCATATAAACACCCAATTGGAT 59.407 41.667 26.60 5.52 37.39 3.41
4222 5329 5.767665 CCATATAAACACCCAATTGGATCGA 59.232 40.000 26.60 6.17 37.39 3.59
4394 5501 1.000938 GCCAGCTTTTGACCTTCTGTG 60.001 52.381 0.00 0.00 0.00 3.66
4450 5557 5.305902 TGTGACCTTTCAGTGACCAATAGTA 59.694 40.000 0.00 0.00 30.10 1.82
4487 5594 5.805486 TGACATATTTCTTGTAGTGCTCGTC 59.195 40.000 0.00 0.00 0.00 4.20
4488 5595 5.720202 ACATATTTCTTGTAGTGCTCGTCA 58.280 37.500 0.00 0.00 0.00 4.35
4489 5596 5.807520 ACATATTTCTTGTAGTGCTCGTCAG 59.192 40.000 0.00 0.00 0.00 3.51
4512 5619 4.106925 CAGGGGGCTCTCCTGCAC 62.107 72.222 8.02 0.00 44.29 4.57
4516 5623 4.459089 GGGCTCTCCTGCACCGTC 62.459 72.222 0.00 0.00 34.04 4.79
4517 5624 4.459089 GGCTCTCCTGCACCGTCC 62.459 72.222 0.00 0.00 34.04 4.79
4518 5625 4.459089 GCTCTCCTGCACCGTCCC 62.459 72.222 0.00 0.00 0.00 4.46
4519 5626 2.681778 CTCTCCTGCACCGTCCCT 60.682 66.667 0.00 0.00 0.00 4.20
4520 5627 2.680352 TCTCCTGCACCGTCCCTC 60.680 66.667 0.00 0.00 0.00 4.30
4521 5628 2.681778 CTCCTGCACCGTCCCTCT 60.682 66.667 0.00 0.00 0.00 3.69
4522 5629 2.680352 TCCTGCACCGTCCCTCTC 60.680 66.667 0.00 0.00 0.00 3.20
4523 5630 4.135153 CCTGCACCGTCCCTCTCG 62.135 72.222 0.00 0.00 0.00 4.04
4524 5631 3.374402 CTGCACCGTCCCTCTCGT 61.374 66.667 0.00 0.00 0.00 4.18
4525 5632 3.343788 CTGCACCGTCCCTCTCGTC 62.344 68.421 0.00 0.00 0.00 4.20
4526 5633 4.477975 GCACCGTCCCTCTCGTCG 62.478 72.222 0.00 0.00 0.00 5.12
4527 5634 4.477975 CACCGTCCCTCTCGTCGC 62.478 72.222 0.00 0.00 0.00 5.19
4530 5637 3.878519 CGTCCCTCTCGTCGCCTC 61.879 72.222 0.00 0.00 0.00 4.70
4531 5638 2.750637 GTCCCTCTCGTCGCCTCA 60.751 66.667 0.00 0.00 0.00 3.86
4532 5639 2.750637 TCCCTCTCGTCGCCTCAC 60.751 66.667 0.00 0.00 0.00 3.51
4533 5640 3.827898 CCCTCTCGTCGCCTCACC 61.828 72.222 0.00 0.00 0.00 4.02
4534 5641 3.827898 CCTCTCGTCGCCTCACCC 61.828 72.222 0.00 0.00 0.00 4.61
4535 5642 2.752238 CTCTCGTCGCCTCACCCT 60.752 66.667 0.00 0.00 0.00 4.34
4536 5643 2.750637 TCTCGTCGCCTCACCCTC 60.751 66.667 0.00 0.00 0.00 4.30
4537 5644 3.827898 CTCGTCGCCTCACCCTCC 61.828 72.222 0.00 0.00 0.00 4.30
4540 5647 4.131088 GTCGCCTCACCCTCCGTC 62.131 72.222 0.00 0.00 0.00 4.79
4543 5650 3.775654 GCCTCACCCTCCGTCCTG 61.776 72.222 0.00 0.00 0.00 3.86
4544 5651 3.775654 CCTCACCCTCCGTCCTGC 61.776 72.222 0.00 0.00 0.00 4.85
4545 5652 4.135153 CTCACCCTCCGTCCTGCG 62.135 72.222 0.00 0.00 40.95 5.18
4546 5653 4.988716 TCACCCTCCGTCCTGCGT 62.989 66.667 0.00 0.00 39.32 5.24
4547 5654 3.066190 CACCCTCCGTCCTGCGTA 61.066 66.667 0.00 0.00 39.32 4.42
4548 5655 2.754658 ACCCTCCGTCCTGCGTAG 60.755 66.667 0.00 0.00 39.32 3.51
4549 5656 3.528370 CCCTCCGTCCTGCGTAGG 61.528 72.222 14.20 14.20 45.00 3.18
4550 5657 4.208686 CCTCCGTCCTGCGTAGGC 62.209 72.222 15.66 9.18 39.79 3.93
4551 5658 4.554363 CTCCGTCCTGCGTAGGCG 62.554 72.222 22.42 22.42 44.22 5.52
4553 5660 4.849329 CCGTCCTGCGTAGGCGAC 62.849 72.222 27.86 16.72 44.22 5.19
4561 5668 4.476410 CGTAGGCGACGCAGCTCA 62.476 66.667 23.09 0.00 46.27 4.26
4562 5669 2.580867 GTAGGCGACGCAGCTCAG 60.581 66.667 23.09 0.00 37.29 3.35
4563 5670 3.826754 TAGGCGACGCAGCTCAGG 61.827 66.667 23.09 0.00 37.29 3.86
4567 5674 3.753434 CGACGCAGCTCAGGAGGT 61.753 66.667 0.00 0.00 40.20 3.85
4572 5679 2.583520 CAGCTCAGGAGGTGCCTC 59.416 66.667 14.69 9.66 46.97 4.70
4590 5697 4.101448 CGCCACCTCCTCCCCAAG 62.101 72.222 0.00 0.00 0.00 3.61
4591 5698 2.610859 GCCACCTCCTCCCCAAGA 60.611 66.667 0.00 0.00 0.00 3.02
4592 5699 2.231380 GCCACCTCCTCCCCAAGAA 61.231 63.158 0.00 0.00 0.00 2.52
4593 5700 1.994463 CCACCTCCTCCCCAAGAAG 59.006 63.158 0.00 0.00 0.00 2.85
4594 5701 1.566298 CCACCTCCTCCCCAAGAAGG 61.566 65.000 0.00 0.00 37.03 3.46
4595 5702 0.842467 CACCTCCTCCCCAAGAAGGT 60.842 60.000 0.00 0.00 34.66 3.50
4596 5703 0.842467 ACCTCCTCCCCAAGAAGGTG 60.842 60.000 0.00 0.00 34.66 4.00
4597 5704 1.301293 CTCCTCCCCAAGAAGGTGC 59.699 63.158 0.00 0.00 34.66 5.01
4598 5705 2.203549 CTCCTCCCCAAGAAGGTGCC 62.204 65.000 0.00 0.00 34.66 5.01
4599 5706 2.356667 CTCCCCAAGAAGGTGCCC 59.643 66.667 0.00 0.00 34.66 5.36
4600 5707 2.121506 TCCCCAAGAAGGTGCCCT 60.122 61.111 0.00 0.00 34.66 5.19
4601 5708 0.914417 CTCCCCAAGAAGGTGCCCTA 60.914 60.000 0.00 0.00 31.13 3.53
4602 5709 0.914417 TCCCCAAGAAGGTGCCCTAG 60.914 60.000 0.00 0.00 31.13 3.02
4603 5710 1.077429 CCCAAGAAGGTGCCCTAGC 60.077 63.158 0.00 0.00 31.13 3.42
4604 5711 1.566298 CCCAAGAAGGTGCCCTAGCT 61.566 60.000 0.00 0.00 39.21 3.32
4605 5712 0.107459 CCAAGAAGGTGCCCTAGCTC 60.107 60.000 0.00 0.00 40.80 4.09
4611 5718 2.124529 GTGCCCTAGCTCCAAGGC 60.125 66.667 8.80 8.80 45.96 4.35
4613 5720 3.787001 GCCCTAGCTCCAAGGCGT 61.787 66.667 0.00 0.00 35.30 5.68
4614 5721 2.187946 CCCTAGCTCCAAGGCGTG 59.812 66.667 0.00 0.00 37.29 5.34
4615 5722 2.512515 CCTAGCTCCAAGGCGTGC 60.513 66.667 0.00 0.00 37.29 5.34
4616 5723 2.887568 CTAGCTCCAAGGCGTGCG 60.888 66.667 0.00 0.00 37.29 5.34
4617 5724 4.451150 TAGCTCCAAGGCGTGCGG 62.451 66.667 0.00 0.00 37.29 5.69
4628 5735 3.598715 CGTGCGGCCCCTATACGA 61.599 66.667 0.00 0.00 36.94 3.43
4629 5736 2.338984 GTGCGGCCCCTATACGAG 59.661 66.667 0.00 0.00 0.00 4.18
4630 5737 2.196502 TGCGGCCCCTATACGAGA 59.803 61.111 0.00 0.00 0.00 4.04
4631 5738 2.198287 TGCGGCCCCTATACGAGAC 61.198 63.158 0.00 0.00 0.00 3.36
4632 5739 2.928741 GCGGCCCCTATACGAGACC 61.929 68.421 0.00 0.00 0.00 3.85
4633 5740 2.273912 CGGCCCCTATACGAGACCC 61.274 68.421 0.00 0.00 0.00 4.46
4634 5741 1.152398 GGCCCCTATACGAGACCCA 60.152 63.158 0.00 0.00 0.00 4.51
4635 5742 1.470165 GGCCCCTATACGAGACCCAC 61.470 65.000 0.00 0.00 0.00 4.61
4636 5743 1.470165 GCCCCTATACGAGACCCACC 61.470 65.000 0.00 0.00 0.00 4.61
4637 5744 0.105862 CCCCTATACGAGACCCACCA 60.106 60.000 0.00 0.00 0.00 4.17
4638 5745 1.038280 CCCTATACGAGACCCACCAC 58.962 60.000 0.00 0.00 0.00 4.16
4639 5746 0.666913 CCTATACGAGACCCACCACG 59.333 60.000 0.00 0.00 0.00 4.94
4640 5747 1.386533 CTATACGAGACCCACCACGT 58.613 55.000 0.00 0.00 41.66 4.49
4641 5748 1.332997 CTATACGAGACCCACCACGTC 59.667 57.143 0.00 0.00 39.59 4.34
4642 5749 1.318158 ATACGAGACCCACCACGTCC 61.318 60.000 0.00 0.00 39.59 4.79
4643 5750 4.415332 CGAGACCCACCACGTCCG 62.415 72.222 0.00 0.00 0.00 4.79
4644 5751 4.065281 GAGACCCACCACGTCCGG 62.065 72.222 0.00 0.00 0.00 5.14
4665 5772 4.697756 CCGCACGGCAAGAAGGGA 62.698 66.667 0.00 0.00 0.00 4.20
4666 5773 3.121030 CGCACGGCAAGAAGGGAG 61.121 66.667 0.00 0.00 0.00 4.30
4667 5774 3.435186 GCACGGCAAGAAGGGAGC 61.435 66.667 0.00 0.00 0.00 4.70
4668 5775 2.348998 CACGGCAAGAAGGGAGCT 59.651 61.111 0.00 0.00 0.00 4.09
4669 5776 2.037136 CACGGCAAGAAGGGAGCTG 61.037 63.158 0.00 0.00 40.41 4.24
4670 5777 3.130160 CGGCAAGAAGGGAGCTGC 61.130 66.667 0.00 0.00 0.00 5.25
4671 5778 2.753446 GGCAAGAAGGGAGCTGCC 60.753 66.667 18.04 18.04 35.20 4.85
4672 5779 2.034687 GCAAGAAGGGAGCTGCCA 59.965 61.111 27.56 0.00 38.95 4.92
4673 5780 1.604593 GCAAGAAGGGAGCTGCCAA 60.605 57.895 27.56 0.00 38.95 4.52
4674 5781 1.871126 GCAAGAAGGGAGCTGCCAAC 61.871 60.000 27.56 18.64 38.95 3.77
4675 5782 0.538057 CAAGAAGGGAGCTGCCAACA 60.538 55.000 27.56 0.00 38.95 3.33
4676 5783 0.185901 AAGAAGGGAGCTGCCAACAA 59.814 50.000 27.56 0.00 38.95 2.83
4677 5784 0.185901 AGAAGGGAGCTGCCAACAAA 59.814 50.000 27.56 0.00 38.95 2.83
4678 5785 1.203100 AGAAGGGAGCTGCCAACAAAT 60.203 47.619 27.56 0.43 38.95 2.32
4679 5786 1.203287 GAAGGGAGCTGCCAACAAATC 59.797 52.381 27.56 10.28 38.95 2.17
4680 5787 0.613012 AGGGAGCTGCCAACAAATCC 60.613 55.000 27.56 0.00 38.95 3.01
4681 5788 1.607801 GGGAGCTGCCAACAAATCCC 61.608 60.000 20.97 1.42 41.21 3.85
4682 5789 0.613012 GGAGCTGCCAACAAATCCCT 60.613 55.000 0.00 0.00 36.34 4.20
4683 5790 1.260544 GAGCTGCCAACAAATCCCTT 58.739 50.000 0.00 0.00 0.00 3.95
4684 5791 0.971386 AGCTGCCAACAAATCCCTTG 59.029 50.000 0.00 0.00 41.19 3.61
4691 5798 2.470311 ACAAATCCCTTGTCCCCGA 58.530 52.632 0.00 0.00 45.50 5.14
4692 5799 0.328258 ACAAATCCCTTGTCCCCGAG 59.672 55.000 0.00 0.00 45.50 4.63
4693 5800 0.618458 CAAATCCCTTGTCCCCGAGA 59.382 55.000 0.00 0.00 0.00 4.04
4694 5801 1.004277 CAAATCCCTTGTCCCCGAGAA 59.996 52.381 0.00 0.00 0.00 2.87
4695 5802 0.912486 AATCCCTTGTCCCCGAGAAG 59.088 55.000 0.00 0.00 33.51 2.85
4697 5804 3.807368 CCTTGTCCCCGAGAAGGT 58.193 61.111 8.96 0.00 44.74 3.50
4698 5805 1.296715 CCTTGTCCCCGAGAAGGTG 59.703 63.158 8.96 0.00 44.74 4.00
4699 5806 1.376037 CTTGTCCCCGAGAAGGTGC 60.376 63.158 0.00 0.00 38.74 5.01
4700 5807 1.831652 CTTGTCCCCGAGAAGGTGCT 61.832 60.000 0.00 0.00 38.74 4.40
4701 5808 1.827399 TTGTCCCCGAGAAGGTGCTC 61.827 60.000 0.00 0.00 38.74 4.26
4707 5814 3.482783 GAGAAGGTGCTCGCGTGC 61.483 66.667 25.10 25.10 0.00 5.34
4708 5815 3.923563 GAGAAGGTGCTCGCGTGCT 62.924 63.158 30.29 13.14 0.00 4.40
4709 5816 3.482783 GAAGGTGCTCGCGTGCTC 61.483 66.667 30.29 26.41 0.00 4.26
4713 5820 3.857854 GTGCTCGCGTGCTCCATG 61.858 66.667 30.29 3.31 0.00 3.66
4714 5821 4.377708 TGCTCGCGTGCTCCATGT 62.378 61.111 30.29 0.00 0.00 3.21
4715 5822 2.202743 GCTCGCGTGCTCCATGTA 60.203 61.111 24.65 0.00 0.00 2.29
4716 5823 2.517450 GCTCGCGTGCTCCATGTAC 61.517 63.158 24.65 0.00 0.00 2.90
4717 5824 1.878522 CTCGCGTGCTCCATGTACC 60.879 63.158 5.77 0.00 0.00 3.34
4718 5825 3.254654 CGCGTGCTCCATGTACCG 61.255 66.667 0.00 0.00 0.00 4.02
4719 5826 2.890474 GCGTGCTCCATGTACCGG 60.890 66.667 0.00 0.00 0.00 5.28
4720 5827 2.890474 CGTGCTCCATGTACCGGC 60.890 66.667 0.00 0.00 0.00 6.13
4721 5828 2.267642 GTGCTCCATGTACCGGCA 59.732 61.111 0.00 0.00 0.00 5.69
4722 5829 2.106683 GTGCTCCATGTACCGGCAC 61.107 63.158 0.00 0.00 44.53 5.01
4723 5830 2.267642 GCTCCATGTACCGGCACA 59.732 61.111 10.61 10.61 0.00 4.57
4724 5831 2.106683 GCTCCATGTACCGGCACAC 61.107 63.158 10.38 1.62 0.00 3.82
4725 5832 1.449601 CTCCATGTACCGGCACACC 60.450 63.158 10.38 0.00 0.00 4.16
4726 5833 2.178876 CTCCATGTACCGGCACACCA 62.179 60.000 10.38 0.00 34.57 4.17
4727 5834 1.302913 CCATGTACCGGCACACCAA 60.303 57.895 10.38 0.00 34.57 3.67
4728 5835 1.305219 CCATGTACCGGCACACCAAG 61.305 60.000 10.38 0.56 34.57 3.61
4729 5836 0.321210 CATGTACCGGCACACCAAGA 60.321 55.000 10.38 0.00 34.57 3.02
4730 5837 0.321298 ATGTACCGGCACACCAAGAC 60.321 55.000 10.38 0.00 34.57 3.01
4731 5838 1.370064 GTACCGGCACACCAAGACT 59.630 57.895 0.00 0.00 34.57 3.24
4732 5839 0.949105 GTACCGGCACACCAAGACTG 60.949 60.000 0.00 0.00 34.57 3.51
4733 5840 2.725203 TACCGGCACACCAAGACTGC 62.725 60.000 0.00 0.00 34.57 4.40
4734 5841 2.591429 CGGCACACCAAGACTGCA 60.591 61.111 0.00 0.00 34.57 4.41
4735 5842 1.968017 CGGCACACCAAGACTGCAT 60.968 57.895 0.00 0.00 34.57 3.96
4736 5843 1.878775 GGCACACCAAGACTGCATC 59.121 57.895 0.00 0.00 35.26 3.91
4737 5844 1.589716 GGCACACCAAGACTGCATCC 61.590 60.000 0.00 0.00 35.26 3.51
4738 5845 1.589716 GCACACCAAGACTGCATCCC 61.590 60.000 0.00 0.00 0.00 3.85
4739 5846 0.037303 CACACCAAGACTGCATCCCT 59.963 55.000 0.00 0.00 0.00 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
310 314 3.363341 TCATTTTTCGAGTGCCCAAAC 57.637 42.857 0.00 0.00 0.00 2.93
440 444 1.536709 GGGTGTTTTGTGAAGCAGCTG 60.537 52.381 10.11 10.11 42.06 4.24
485 489 8.825667 TTGGCTCAGAAAATTTATGGTTTAAC 57.174 30.769 0.24 0.00 0.00 2.01
516 520 1.048724 GGGTGATCCGTGGGATGAGA 61.049 60.000 1.07 0.00 43.27 3.27
580 584 2.038659 GATTAGGCTGCTGAGAGGTCT 58.961 52.381 0.00 0.00 0.00 3.85
581 585 1.069978 GGATTAGGCTGCTGAGAGGTC 59.930 57.143 0.00 0.00 0.00 3.85
1019 1027 3.430497 CGAGGGGAGGGAGGAGGA 61.430 72.222 0.00 0.00 0.00 3.71
1240 1249 2.092968 CCCGGAGAATCATGAGAAACCA 60.093 50.000 0.73 0.00 36.25 3.67
1270 1279 1.753930 TTCGCGGTGTCATAGACCTA 58.246 50.000 6.13 0.00 0.00 3.08
1668 1677 5.544650 AGTACCACTAAAAATGCTACGTGT 58.455 37.500 0.00 0.00 0.00 4.49
1681 1690 4.587262 TCTGTTCTTGCTGAGTACCACTAA 59.413 41.667 0.00 0.00 0.00 2.24
1722 1731 6.822667 AACAATGCATTGATACAAGACTCA 57.177 33.333 38.99 0.00 40.14 3.41
1861 2960 9.571810 GTCAATTCATACAAGCATGATAAACAA 57.428 29.630 0.00 0.00 34.95 2.83
2226 3326 3.108847 TCAAACCTTGTTTGGGGAGTT 57.891 42.857 16.99 0.00 0.00 3.01
2304 3404 3.292460 CCACCCTAGTTTGGTTTCACAA 58.708 45.455 0.00 0.00 32.46 3.33
2348 3448 2.859165 TGAACTAAGACCAAGGCCAG 57.141 50.000 5.01 0.00 0.00 4.85
2399 3499 2.301870 AGTCCGTGAGCATTAACCAAGA 59.698 45.455 0.00 0.00 0.00 3.02
2508 3608 1.904287 AAACCGAAACTGCATAGCCA 58.096 45.000 0.00 0.00 0.00 4.75
2523 3623 3.952967 AGGATCACTAGACCGAGTAAACC 59.047 47.826 0.00 0.00 0.00 3.27
2608 3708 0.394938 TCGCTGCCCTAAACAGTCAA 59.605 50.000 0.00 0.00 37.47 3.18
2673 3773 6.127054 TGCTTTACAACTCATATGTAGAGGCT 60.127 38.462 1.90 0.00 36.50 4.58
3812 4916 4.217550 GGGCAGTACAAACAGCTATTCAAA 59.782 41.667 0.00 0.00 38.16 2.69
4015 5121 1.645710 CAGGTCCCACTAGTCAGGTT 58.354 55.000 8.08 0.00 0.00 3.50
4107 5213 3.055167 GGCCCAACAATTCAGCCTTTTAT 60.055 43.478 0.00 0.00 40.57 1.40
4219 5326 0.321346 TGGCACAAGATTCAGCTCGA 59.679 50.000 0.00 0.00 31.92 4.04
4222 5329 2.089980 GATGTGGCACAAGATTCAGCT 58.910 47.619 25.95 4.08 44.16 4.24
4273 5380 0.910088 GGTCACTAGCAACCTCCCCT 60.910 60.000 6.84 0.00 32.54 4.79
4394 5501 7.042119 CCATTTATGACCTTTTTGTGACCAAAC 60.042 37.037 0.00 0.00 40.19 2.93
4492 5599 3.406200 CAGGAGAGCCCCCTGTGG 61.406 72.222 8.11 0.00 44.66 4.17
4499 5606 4.459089 GACGGTGCAGGAGAGCCC 62.459 72.222 0.00 0.00 33.31 5.19
4500 5607 4.459089 GGACGGTGCAGGAGAGCC 62.459 72.222 0.00 0.00 0.00 4.70
4501 5608 4.459089 GGGACGGTGCAGGAGAGC 62.459 72.222 1.14 0.00 0.00 4.09
4502 5609 2.681778 AGGGACGGTGCAGGAGAG 60.682 66.667 1.14 0.00 0.00 3.20
4503 5610 2.680352 GAGGGACGGTGCAGGAGA 60.680 66.667 1.14 0.00 0.00 3.71
4504 5611 2.681778 AGAGGGACGGTGCAGGAG 60.682 66.667 1.14 0.00 0.00 3.69
4505 5612 2.680352 GAGAGGGACGGTGCAGGA 60.680 66.667 1.14 0.00 0.00 3.86
4506 5613 4.135153 CGAGAGGGACGGTGCAGG 62.135 72.222 1.14 0.00 0.00 4.85
4507 5614 3.343788 GACGAGAGGGACGGTGCAG 62.344 68.421 1.14 0.00 34.93 4.41
4508 5615 3.371063 GACGAGAGGGACGGTGCA 61.371 66.667 1.14 0.00 34.93 4.57
4509 5616 4.477975 CGACGAGAGGGACGGTGC 62.478 72.222 0.00 0.00 34.93 5.01
4510 5617 4.477975 GCGACGAGAGGGACGGTG 62.478 72.222 0.00 0.00 34.93 4.94
4513 5620 3.878519 GAGGCGACGAGAGGGACG 61.879 72.222 0.00 0.00 0.00 4.79
4514 5621 2.750637 TGAGGCGACGAGAGGGAC 60.751 66.667 0.00 0.00 0.00 4.46
4515 5622 2.750637 GTGAGGCGACGAGAGGGA 60.751 66.667 0.00 0.00 0.00 4.20
4516 5623 3.827898 GGTGAGGCGACGAGAGGG 61.828 72.222 0.00 0.00 0.00 4.30
4517 5624 3.827898 GGGTGAGGCGACGAGAGG 61.828 72.222 0.00 0.00 0.00 3.69
4518 5625 2.752238 AGGGTGAGGCGACGAGAG 60.752 66.667 0.00 0.00 0.00 3.20
4519 5626 2.750637 GAGGGTGAGGCGACGAGA 60.751 66.667 0.00 0.00 0.00 4.04
4520 5627 3.827898 GGAGGGTGAGGCGACGAG 61.828 72.222 0.00 0.00 0.00 4.18
4523 5630 4.131088 GACGGAGGGTGAGGCGAC 62.131 72.222 0.00 0.00 0.00 5.19
4526 5633 3.775654 CAGGACGGAGGGTGAGGC 61.776 72.222 0.00 0.00 0.00 4.70
4527 5634 3.775654 GCAGGACGGAGGGTGAGG 61.776 72.222 0.00 0.00 0.00 3.86
4528 5635 4.135153 CGCAGGACGGAGGGTGAG 62.135 72.222 0.00 0.00 38.44 3.51
4545 5652 2.580867 CTGAGCTGCGTCGCCTAC 60.581 66.667 15.88 3.82 0.00 3.18
4546 5653 3.826754 CCTGAGCTGCGTCGCCTA 61.827 66.667 15.88 0.00 0.00 3.93
4550 5657 3.753434 ACCTCCTGAGCTGCGTCG 61.753 66.667 0.00 0.00 0.00 5.12
4551 5658 2.125753 CACCTCCTGAGCTGCGTC 60.126 66.667 0.00 0.00 0.00 5.19
4552 5659 4.385405 GCACCTCCTGAGCTGCGT 62.385 66.667 0.00 0.00 31.31 5.24
4554 5661 3.715097 AGGCACCTCCTGAGCTGC 61.715 66.667 5.99 5.99 45.54 5.25
4573 5680 4.101448 CTTGGGGAGGAGGTGGCG 62.101 72.222 0.00 0.00 0.00 5.69
4574 5681 2.203549 CTTCTTGGGGAGGAGGTGGC 62.204 65.000 0.00 0.00 0.00 5.01
4575 5682 1.566298 CCTTCTTGGGGAGGAGGTGG 61.566 65.000 0.00 0.00 45.12 4.61
4576 5683 1.994463 CCTTCTTGGGGAGGAGGTG 59.006 63.158 0.00 0.00 45.12 4.00
4577 5684 4.589569 CCTTCTTGGGGAGGAGGT 57.410 61.111 0.00 0.00 45.12 3.85
4579 5686 1.301293 GCACCTTCTTGGGGAGGAG 59.699 63.158 0.00 0.00 43.63 3.69
4580 5687 2.231380 GGCACCTTCTTGGGGAGGA 61.231 63.158 0.00 0.00 43.63 3.71
4581 5688 2.356667 GGCACCTTCTTGGGGAGG 59.643 66.667 0.00 0.00 43.63 4.30
4594 5701 2.124529 GCCTTGGAGCTAGGGCAC 60.125 66.667 4.81 0.00 43.59 5.01
4595 5702 3.785859 CGCCTTGGAGCTAGGGCA 61.786 66.667 10.01 0.00 44.27 5.36
4596 5703 3.787001 ACGCCTTGGAGCTAGGGC 61.787 66.667 3.19 1.36 41.02 5.19
4597 5704 2.187946 CACGCCTTGGAGCTAGGG 59.812 66.667 3.19 0.00 33.19 3.53
4598 5705 2.512515 GCACGCCTTGGAGCTAGG 60.513 66.667 0.00 0.00 35.80 3.02
4599 5706 2.887568 CGCACGCCTTGGAGCTAG 60.888 66.667 0.00 0.00 0.00 3.42
4600 5707 4.451150 CCGCACGCCTTGGAGCTA 62.451 66.667 0.00 0.00 0.00 3.32
4611 5718 3.553437 CTCGTATAGGGGCCGCACG 62.553 68.421 23.39 21.91 0.00 5.34
4612 5719 2.198287 TCTCGTATAGGGGCCGCAC 61.198 63.158 23.39 10.62 0.00 5.34
4613 5720 2.196502 TCTCGTATAGGGGCCGCA 59.803 61.111 23.39 8.50 0.00 5.69
4614 5721 2.649614 GTCTCGTATAGGGGCCGC 59.350 66.667 12.88 12.88 0.00 6.53
4615 5722 2.273912 GGGTCTCGTATAGGGGCCG 61.274 68.421 0.00 0.00 0.00 6.13
4616 5723 1.152398 TGGGTCTCGTATAGGGGCC 60.152 63.158 0.00 0.00 0.00 5.80
4617 5724 1.470165 GGTGGGTCTCGTATAGGGGC 61.470 65.000 0.00 0.00 0.00 5.80
4618 5725 0.105862 TGGTGGGTCTCGTATAGGGG 60.106 60.000 0.00 0.00 0.00 4.79
4619 5726 1.038280 GTGGTGGGTCTCGTATAGGG 58.962 60.000 0.00 0.00 0.00 3.53
4620 5727 0.666913 CGTGGTGGGTCTCGTATAGG 59.333 60.000 0.00 0.00 0.00 2.57
4621 5728 1.332997 GACGTGGTGGGTCTCGTATAG 59.667 57.143 0.00 0.00 36.67 1.31
4622 5729 1.382522 GACGTGGTGGGTCTCGTATA 58.617 55.000 0.00 0.00 36.67 1.47
4623 5730 1.318158 GGACGTGGTGGGTCTCGTAT 61.318 60.000 0.00 0.00 36.67 3.06
4624 5731 1.973281 GGACGTGGTGGGTCTCGTA 60.973 63.158 0.00 0.00 36.67 3.43
4625 5732 3.300765 GGACGTGGTGGGTCTCGT 61.301 66.667 0.00 0.00 39.21 4.18
4626 5733 4.415332 CGGACGTGGTGGGTCTCG 62.415 72.222 0.00 0.00 34.82 4.04
4627 5734 4.065281 CCGGACGTGGTGGGTCTC 62.065 72.222 0.00 0.00 34.82 3.36
4648 5755 4.697756 TCCCTTCTTGCCGTGCGG 62.698 66.667 6.22 6.22 38.57 5.69
4649 5756 3.121030 CTCCCTTCTTGCCGTGCG 61.121 66.667 0.00 0.00 0.00 5.34
4650 5757 3.435186 GCTCCCTTCTTGCCGTGC 61.435 66.667 0.00 0.00 0.00 5.34
4651 5758 2.037136 CAGCTCCCTTCTTGCCGTG 61.037 63.158 0.00 0.00 0.00 4.94
4652 5759 2.348998 CAGCTCCCTTCTTGCCGT 59.651 61.111 0.00 0.00 0.00 5.68
4653 5760 3.130160 GCAGCTCCCTTCTTGCCG 61.130 66.667 0.00 0.00 0.00 5.69
4654 5761 2.753446 GGCAGCTCCCTTCTTGCC 60.753 66.667 0.00 0.00 35.20 4.52
4655 5762 1.604593 TTGGCAGCTCCCTTCTTGC 60.605 57.895 0.00 0.00 0.00 4.01
4656 5763 0.538057 TGTTGGCAGCTCCCTTCTTG 60.538 55.000 2.28 0.00 0.00 3.02
4657 5764 0.185901 TTGTTGGCAGCTCCCTTCTT 59.814 50.000 2.28 0.00 0.00 2.52
4658 5765 0.185901 TTTGTTGGCAGCTCCCTTCT 59.814 50.000 2.28 0.00 0.00 2.85
4659 5766 1.203287 GATTTGTTGGCAGCTCCCTTC 59.797 52.381 2.28 0.00 0.00 3.46
4660 5767 1.260544 GATTTGTTGGCAGCTCCCTT 58.739 50.000 2.28 0.00 0.00 3.95
4661 5768 0.613012 GGATTTGTTGGCAGCTCCCT 60.613 55.000 2.28 0.00 0.00 4.20
4662 5769 1.607801 GGGATTTGTTGGCAGCTCCC 61.608 60.000 10.63 10.63 38.86 4.30
4663 5770 0.613012 AGGGATTTGTTGGCAGCTCC 60.613 55.000 2.28 1.13 0.00 4.70
4664 5771 1.067354 CAAGGGATTTGTTGGCAGCTC 60.067 52.381 2.28 0.00 31.92 4.09
4665 5772 0.971386 CAAGGGATTTGTTGGCAGCT 59.029 50.000 2.28 0.00 31.92 4.24
4666 5773 3.520187 CAAGGGATTTGTTGGCAGC 57.480 52.632 0.00 0.00 31.92 5.25
4674 5781 0.618458 TCTCGGGGACAAGGGATTTG 59.382 55.000 0.00 0.00 42.68 2.32
4675 5782 1.282157 CTTCTCGGGGACAAGGGATTT 59.718 52.381 0.00 0.00 0.00 2.17
4676 5783 0.912486 CTTCTCGGGGACAAGGGATT 59.088 55.000 0.00 0.00 0.00 3.01
4677 5784 0.983378 CCTTCTCGGGGACAAGGGAT 60.983 60.000 0.00 0.00 34.13 3.85
4678 5785 1.612442 CCTTCTCGGGGACAAGGGA 60.612 63.158 0.00 0.00 34.13 4.20
4679 5786 1.918800 ACCTTCTCGGGGACAAGGG 60.919 63.158 6.24 0.00 41.05 3.95
4680 5787 1.296715 CACCTTCTCGGGGACAAGG 59.703 63.158 0.00 0.00 39.13 3.61
4681 5788 1.376037 GCACCTTCTCGGGGACAAG 60.376 63.158 0.00 0.00 39.13 3.16
4682 5789 1.827399 GAGCACCTTCTCGGGGACAA 61.827 60.000 0.00 0.00 39.13 3.18
4683 5790 2.203788 AGCACCTTCTCGGGGACA 60.204 61.111 0.00 0.00 39.13 4.02
4684 5791 2.579738 GAGCACCTTCTCGGGGAC 59.420 66.667 0.00 0.00 39.13 4.46
4690 5797 3.482783 GCACGCGAGCACCTTCTC 61.483 66.667 23.72 0.00 0.00 2.87
4691 5798 3.923563 GAGCACGCGAGCACCTTCT 62.924 63.158 29.45 8.41 36.85 2.85
4692 5799 3.482783 GAGCACGCGAGCACCTTC 61.483 66.667 29.45 14.84 36.85 3.46
4696 5803 3.857854 CATGGAGCACGCGAGCAC 61.858 66.667 29.45 23.09 36.85 4.40
4697 5804 3.000693 TACATGGAGCACGCGAGCA 62.001 57.895 29.45 10.45 36.85 4.26
4698 5805 2.202743 TACATGGAGCACGCGAGC 60.203 61.111 21.28 21.28 0.00 5.03
4699 5806 1.878522 GGTACATGGAGCACGCGAG 60.879 63.158 15.93 5.97 0.00 5.03
4700 5807 2.183300 GGTACATGGAGCACGCGA 59.817 61.111 15.93 0.00 0.00 5.87
4701 5808 3.254654 CGGTACATGGAGCACGCG 61.255 66.667 3.53 3.53 0.00 6.01
4702 5809 2.890474 CCGGTACATGGAGCACGC 60.890 66.667 8.09 0.00 0.00 5.34
4703 5810 2.890474 GCCGGTACATGGAGCACG 60.890 66.667 8.09 0.00 0.00 5.34
4704 5811 2.106683 GTGCCGGTACATGGAGCAC 61.107 63.158 18.66 6.48 45.99 4.40
4705 5812 2.267642 GTGCCGGTACATGGAGCA 59.732 61.111 18.66 0.00 0.00 4.26
4706 5813 2.106683 GTGTGCCGGTACATGGAGC 61.107 63.158 28.46 11.48 32.43 4.70
4707 5814 1.449601 GGTGTGCCGGTACATGGAG 60.450 63.158 28.46 0.00 32.43 3.86
4708 5815 1.769716 TTGGTGTGCCGGTACATGGA 61.770 55.000 28.46 13.87 37.67 3.41
4709 5816 1.302913 TTGGTGTGCCGGTACATGG 60.303 57.895 28.46 0.00 37.67 3.66
4710 5817 0.321210 TCTTGGTGTGCCGGTACATG 60.321 55.000 28.46 17.64 37.67 3.21
4711 5818 0.321298 GTCTTGGTGTGCCGGTACAT 60.321 55.000 28.46 0.00 37.67 2.29
4712 5819 1.070105 GTCTTGGTGTGCCGGTACA 59.930 57.895 22.40 22.40 37.67 2.90
4713 5820 0.949105 CAGTCTTGGTGTGCCGGTAC 60.949 60.000 16.68 16.68 37.67 3.34
4714 5821 1.369692 CAGTCTTGGTGTGCCGGTA 59.630 57.895 1.90 0.00 37.67 4.02
4715 5822 2.111043 CAGTCTTGGTGTGCCGGT 59.889 61.111 1.90 0.00 37.67 5.28
4716 5823 3.357079 GCAGTCTTGGTGTGCCGG 61.357 66.667 0.00 0.00 37.67 6.13
4717 5824 1.915614 GATGCAGTCTTGGTGTGCCG 61.916 60.000 0.00 0.00 36.31 5.69
4718 5825 1.589716 GGATGCAGTCTTGGTGTGCC 61.590 60.000 0.00 0.00 36.31 5.01
4719 5826 1.589716 GGGATGCAGTCTTGGTGTGC 61.590 60.000 0.00 0.00 37.73 4.57
4720 5827 0.037303 AGGGATGCAGTCTTGGTGTG 59.963 55.000 0.00 0.00 0.00 3.82
4721 5828 2.468015 AGGGATGCAGTCTTGGTGT 58.532 52.632 0.00 0.00 0.00 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.