Multiple sequence alignment - TraesCS3B01G339300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G339300 chr3B 100.000 6314 0 0 1 6314 545207381 545201068 0.000000e+00 11660.0
1 TraesCS3B01G339300 chr3B 73.798 603 131 19 1391 1972 6672536 6671940 4.960000e-51 213.0
2 TraesCS3B01G339300 chr3D 92.776 1758 89 21 275 2015 418787696 418785960 0.000000e+00 2508.0
3 TraesCS3B01G339300 chr3D 93.792 1337 72 9 3265 4598 418784729 418783401 0.000000e+00 1999.0
4 TraesCS3B01G339300 chr3D 96.092 742 27 2 4678 5418 418783402 418782662 0.000000e+00 1208.0
5 TraesCS3B01G339300 chr3D 90.581 860 39 14 5461 6314 418782662 418781839 0.000000e+00 1101.0
6 TraesCS3B01G339300 chr3D 88.070 285 22 7 1 283 418867569 418867295 1.700000e-85 327.0
7 TraesCS3B01G339300 chr3D 75.385 520 107 14 1471 1972 4182474 4181958 1.370000e-56 231.0
8 TraesCS3B01G339300 chr3A 91.187 1668 78 18 4678 6314 532319553 532321182 0.000000e+00 2202.0
9 TraesCS3B01G339300 chr3A 94.070 1349 62 15 3256 4595 532318212 532319551 0.000000e+00 2032.0
10 TraesCS3B01G339300 chr3A 95.356 646 28 2 1372 2015 532315825 532316470 0.000000e+00 1026.0
11 TraesCS3B01G339300 chr3A 92.163 638 19 10 643 1275 532315131 532315742 0.000000e+00 872.0
12 TraesCS3B01G339300 chr3A 81.410 624 55 33 2279 2858 532316470 532317076 2.680000e-123 453.0
13 TraesCS3B01G339300 chr3A 84.296 433 28 20 1 428 532314449 532314846 2.760000e-103 387.0
14 TraesCS3B01G339300 chr3A 98.693 153 2 0 413 565 532314859 532315011 8.070000e-69 272.0
15 TraesCS3B01G339300 chr3A 75.000 600 129 16 1391 1972 9846100 9845504 2.260000e-64 257.0
16 TraesCS3B01G339300 chr3A 85.870 184 15 5 2990 3163 532317627 532317809 1.080000e-42 185.0
17 TraesCS3B01G339300 chr6D 90.226 266 20 3 2010 2273 348087865 348087604 6.060000e-90 342.0
18 TraesCS3B01G339300 chr6D 87.925 265 24 4 2015 2277 408691762 408691504 7.950000e-79 305.0
19 TraesCS3B01G339300 chr6D 88.636 88 6 4 4595 4679 190909273 190909359 3.110000e-18 104.0
20 TraesCS3B01G339300 chr4D 89.513 267 22 4 2017 2281 443209097 443208835 3.650000e-87 333.0
21 TraesCS3B01G339300 chr4D 89.179 268 23 3 2012 2277 145579770 145579507 4.720000e-86 329.0
22 TraesCS3B01G339300 chr4D 89.139 267 19 6 2015 2278 9306116 9306375 2.200000e-84 324.0
23 TraesCS3B01G339300 chr5B 88.889 261 23 3 2015 2273 446430443 446430699 3.670000e-82 316.0
24 TraesCS3B01G339300 chr5B 76.954 499 88 20 1391 1877 662856327 662855844 6.280000e-65 259.0
25 TraesCS3B01G339300 chr5B 94.118 51 2 1 1 50 626018017 626018067 6.790000e-10 76.8
26 TraesCS3B01G339300 chr5A 88.060 268 26 3 2015 2280 83022825 83023088 4.750000e-81 313.0
27 TraesCS3B01G339300 chr5D 88.506 261 23 4 2010 2268 443651566 443651821 6.150000e-80 309.0
28 TraesCS3B01G339300 chr5D 89.535 86 7 1 4597 4680 188826535 188826620 2.410000e-19 108.0
29 TraesCS3B01G339300 chr5D 85.567 97 10 2 4597 4689 535136260 535136164 1.450000e-16 99.0
30 TraesCS3B01G339300 chr7D 87.594 266 27 5 2014 2277 363048662 363048923 2.860000e-78 303.0
31 TraesCS3B01G339300 chr7D 88.764 89 8 1 4595 4681 83656211 83656299 2.410000e-19 108.0
32 TraesCS3B01G339300 chr7D 93.182 44 2 1 2684 2726 263509384 263509341 5.280000e-06 63.9
33 TraesCS3B01G339300 chr7A 84.568 162 21 2 64 223 611470117 611470276 2.360000e-34 158.0
34 TraesCS3B01G339300 chr4B 87.500 96 8 3 4589 4682 22844128 22844035 2.410000e-19 108.0
35 TraesCS3B01G339300 chr4A 88.043 92 5 6 4592 4679 594030193 594030104 3.110000e-18 104.0
36 TraesCS3B01G339300 chr4A 86.022 93 10 3 4589 4679 590227919 590228010 5.210000e-16 97.1
37 TraesCS3B01G339300 chrUn 87.640 89 10 1 4597 4684 110338132 110338044 1.120000e-17 102.0
38 TraesCS3B01G339300 chr1D 86.022 93 11 1 4597 4687 41508176 41508084 1.450000e-16 99.0
39 TraesCS3B01G339300 chr2D 94.444 36 1 1 2684 2718 417092968 417092933 3.000000e-03 54.7
40 TraesCS3B01G339300 chr6B 100.000 28 0 0 155 182 655297213 655297240 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G339300 chr3B 545201068 545207381 6313 True 11660.000 11660 100.000000 1 6314 1 chr3B.!!$R2 6313
1 TraesCS3B01G339300 chr3B 6671940 6672536 596 True 213.000 213 73.798000 1391 1972 1 chr3B.!!$R1 581
2 TraesCS3B01G339300 chr3D 418781839 418787696 5857 True 1704.000 2508 93.310250 275 6314 4 chr3D.!!$R3 6039
3 TraesCS3B01G339300 chr3D 4181958 4182474 516 True 231.000 231 75.385000 1471 1972 1 chr3D.!!$R1 501
4 TraesCS3B01G339300 chr3A 532314449 532321182 6733 False 928.625 2202 90.380625 1 6314 8 chr3A.!!$F1 6313
5 TraesCS3B01G339300 chr3A 9845504 9846100 596 True 257.000 257 75.000000 1391 1972 1 chr3A.!!$R1 581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
370 376 0.317160 CGTCAAGACTGCACCCTGTA 59.683 55.000 0.0 0.0 0.00 2.74 F
805 905 0.612744 TCATCAACGATCCAGCACCA 59.387 50.000 0.0 0.0 0.00 4.17 F
806 906 1.012086 CATCAACGATCCAGCACCAG 58.988 55.000 0.0 0.0 0.00 4.00 F
880 980 1.066914 GCAGAAGAGACGTGAAGCAG 58.933 55.000 0.0 0.0 0.00 4.24 F
2701 3159 1.005687 TCCATGAACCATGCCACATCA 59.994 47.619 0.0 0.0 40.20 3.07 F
3523 5232 0.320073 CGTTGCGTTGTCCCCTCTTA 60.320 55.000 0.0 0.0 0.00 2.10 F
4613 6331 0.784495 AGTACTCCCTCAGTCCCACA 59.216 55.000 0.0 0.0 36.43 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2265 2409 0.909623 CTCACAAATACCCCCTCCGT 59.090 55.000 0.00 0.00 0.00 4.69 R
2632 2787 1.341852 AGCACATGCAAATGAAGCACA 59.658 42.857 6.64 0.00 45.95 4.57 R
2677 3135 2.509131 TGTGGCATGGTTCATGGATAGA 59.491 45.455 9.54 0.00 41.64 1.98 R
2867 3362 0.458197 TGTTTGCTTATGCGGCATGC 60.458 50.000 24.99 20.05 43.34 4.06 R
4571 6289 0.752009 TTTAACCCTGGCGCACACAA 60.752 50.000 10.83 0.00 0.00 3.33 R
4969 6691 1.283487 GGCCAACCGTGTAAAACCG 59.717 57.895 0.00 0.00 0.00 4.44 R
5591 7337 2.095768 CGTCGGAAATGCAAGACATGTT 60.096 45.455 0.00 0.00 39.60 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 44 5.629435 GCTTCCTAAAATTCAACTTTGACCG 59.371 40.000 0.00 0.00 36.83 4.79
54 56 5.107913 TCAACTTTGACCGTAAATTACGTCG 60.108 40.000 21.83 11.54 40.30 5.12
77 79 9.171701 GTCGATAGTATGTATCTTTGTGACTTC 57.828 37.037 0.00 0.00 37.40 3.01
191 193 7.878477 TGATCAAAGTTGAATTTCAAGATGC 57.122 32.000 12.02 1.21 41.13 3.91
194 196 5.686841 TCAAAGTTGAATTTCAAGATGCGTG 59.313 36.000 12.02 5.71 37.00 5.34
198 200 4.150517 TTGAATTTCAAGATGCGTGTGCG 61.151 43.478 7.74 0.00 36.45 5.34
220 222 4.516698 CGTCTTATTCATTGGAATGGAGGG 59.483 45.833 0.00 0.00 43.47 4.30
221 223 5.687441 CGTCTTATTCATTGGAATGGAGGGA 60.687 44.000 0.00 0.00 43.47 4.20
222 224 5.767168 GTCTTATTCATTGGAATGGAGGGAG 59.233 44.000 0.00 0.00 43.47 4.30
238 240 7.838991 TGGAGGGAGAGTAGAAGATAGATAT 57.161 40.000 0.00 0.00 0.00 1.63
239 241 8.935142 TGGAGGGAGAGTAGAAGATAGATATA 57.065 38.462 0.00 0.00 0.00 0.86
240 242 8.998814 TGGAGGGAGAGTAGAAGATAGATATAG 58.001 40.741 0.00 0.00 0.00 1.31
369 375 1.069765 CGTCAAGACTGCACCCTGT 59.930 57.895 0.00 0.00 0.00 4.00
370 376 0.317160 CGTCAAGACTGCACCCTGTA 59.683 55.000 0.00 0.00 0.00 2.74
371 377 1.066858 CGTCAAGACTGCACCCTGTAT 60.067 52.381 0.00 0.00 0.00 2.29
372 378 2.165641 CGTCAAGACTGCACCCTGTATA 59.834 50.000 0.00 0.00 0.00 1.47
373 379 3.181475 CGTCAAGACTGCACCCTGTATAT 60.181 47.826 0.00 0.00 0.00 0.86
374 380 4.037565 CGTCAAGACTGCACCCTGTATATA 59.962 45.833 0.00 0.00 0.00 0.86
569 607 2.495669 AGCACTAGTTTGAGAGAGAGCC 59.504 50.000 0.00 0.00 0.00 4.70
574 612 2.178580 AGTTTGAGAGAGAGCCAGAGG 58.821 52.381 0.00 0.00 0.00 3.69
588 626 8.180844 AGAGAGCCAGAGGGTATTATTTACTAT 58.819 37.037 0.00 0.00 36.17 2.12
589 627 8.743636 AGAGCCAGAGGGTATTATTTACTATT 57.256 34.615 0.00 0.00 36.17 1.73
591 629 9.794719 GAGCCAGAGGGTATTATTTACTATTTT 57.205 33.333 0.00 0.00 36.17 1.82
620 658 9.320352 ACAATTTCGCTTTTGGTAAAAATAGTT 57.680 25.926 0.00 0.00 34.81 2.24
624 662 9.968870 TTTCGCTTTTGGTAAAAATAGTTACAT 57.031 25.926 0.00 0.00 35.96 2.29
627 665 9.828852 CGCTTTTGGTAAAAATAGTTACATACA 57.171 29.630 0.00 0.00 35.96 2.29
696 796 3.393800 ACCAAAGTCAGTGTCATCTTCG 58.606 45.455 0.00 0.00 0.00 3.79
698 798 2.086054 AAGTCAGTGTCATCTTCGCC 57.914 50.000 0.00 0.00 0.00 5.54
710 810 0.918983 TCTTCGCCATCCCTTTCCAT 59.081 50.000 0.00 0.00 0.00 3.41
804 904 1.869767 GATCATCAACGATCCAGCACC 59.130 52.381 0.00 0.00 36.57 5.01
805 905 0.612744 TCATCAACGATCCAGCACCA 59.387 50.000 0.00 0.00 0.00 4.17
806 906 1.012086 CATCAACGATCCAGCACCAG 58.988 55.000 0.00 0.00 0.00 4.00
834 934 2.443203 TCTGGGCCGGATTAGCGA 60.443 61.111 12.08 0.00 0.00 4.93
858 958 4.385748 GCATTAACACTTTTAGTTGGCAGC 59.614 41.667 0.00 0.00 0.00 5.25
880 980 1.066914 GCAGAAGAGACGTGAAGCAG 58.933 55.000 0.00 0.00 0.00 4.24
901 1001 5.363939 CAGAGACAAGGATATGGTTCTTCC 58.636 45.833 0.00 0.00 0.00 3.46
925 1025 6.094881 CCTTAATTTAAAATCGGAGCTGACCA 59.905 38.462 0.00 0.00 0.00 4.02
952 1052 9.672673 ATCCAATCCTATTATTATAGCACACAC 57.327 33.333 0.00 0.00 33.73 3.82
953 1053 7.817478 TCCAATCCTATTATTATAGCACACACG 59.183 37.037 0.00 0.00 33.73 4.49
954 1054 7.602644 CCAATCCTATTATTATAGCACACACGT 59.397 37.037 0.00 0.00 33.73 4.49
955 1055 9.634163 CAATCCTATTATTATAGCACACACGTA 57.366 33.333 0.00 0.00 33.73 3.57
979 1079 2.283966 ACCCCTCGAGTGACTGGG 60.284 66.667 18.93 18.93 37.20 4.45
1005 1107 6.544038 AACAATTAAGCAGCAAAAATGGAC 57.456 33.333 0.00 0.00 0.00 4.02
1009 1111 2.088178 GCAGCAAAAATGGACGCCG 61.088 57.895 0.00 0.00 0.00 6.46
1294 1419 4.742201 CCTCCACGCCAGGACACG 62.742 72.222 0.00 0.00 33.19 4.49
1295 1420 3.991051 CTCCACGCCAGGACACGT 61.991 66.667 0.00 0.00 44.75 4.49
1395 1523 2.280592 ACGGACAAGGACGGCAAC 60.281 61.111 0.00 0.00 0.00 4.17
2009 2153 5.892160 TCATTTTCCTTGAGATGCTCTTG 57.108 39.130 0.00 0.00 0.00 3.02
2010 2154 4.157289 TCATTTTCCTTGAGATGCTCTTGC 59.843 41.667 0.00 0.00 40.20 4.01
2023 2167 2.634940 TGCTCTTGCATATACTCCCTCC 59.365 50.000 0.00 0.00 45.31 4.30
2024 2168 2.353208 GCTCTTGCATATACTCCCTCCG 60.353 54.545 0.00 0.00 39.41 4.63
2025 2169 2.894126 CTCTTGCATATACTCCCTCCGT 59.106 50.000 0.00 0.00 0.00 4.69
2026 2170 3.305720 TCTTGCATATACTCCCTCCGTT 58.694 45.455 0.00 0.00 0.00 4.44
2027 2171 3.709653 TCTTGCATATACTCCCTCCGTTT 59.290 43.478 0.00 0.00 0.00 3.60
2028 2172 4.163458 TCTTGCATATACTCCCTCCGTTTT 59.837 41.667 0.00 0.00 0.00 2.43
2029 2173 4.497291 TGCATATACTCCCTCCGTTTTT 57.503 40.909 0.00 0.00 0.00 1.94
2030 2174 5.617528 TGCATATACTCCCTCCGTTTTTA 57.382 39.130 0.00 0.00 0.00 1.52
2031 2175 6.182507 TGCATATACTCCCTCCGTTTTTAT 57.817 37.500 0.00 0.00 0.00 1.40
2032 2176 6.597562 TGCATATACTCCCTCCGTTTTTATT 58.402 36.000 0.00 0.00 0.00 1.40
2033 2177 7.057894 TGCATATACTCCCTCCGTTTTTATTT 58.942 34.615 0.00 0.00 0.00 1.40
2034 2178 8.212312 TGCATATACTCCCTCCGTTTTTATTTA 58.788 33.333 0.00 0.00 0.00 1.40
2035 2179 8.501580 GCATATACTCCCTCCGTTTTTATTTAC 58.498 37.037 0.00 0.00 0.00 2.01
2036 2180 9.774413 CATATACTCCCTCCGTTTTTATTTACT 57.226 33.333 0.00 0.00 0.00 2.24
2037 2181 9.993454 ATATACTCCCTCCGTTTTTATTTACTC 57.007 33.333 0.00 0.00 0.00 2.59
2038 2182 5.494724 ACTCCCTCCGTTTTTATTTACTCC 58.505 41.667 0.00 0.00 0.00 3.85
2039 2183 4.506758 TCCCTCCGTTTTTATTTACTCCG 58.493 43.478 0.00 0.00 0.00 4.63
2040 2184 3.064408 CCCTCCGTTTTTATTTACTCCGC 59.936 47.826 0.00 0.00 0.00 5.54
2041 2185 3.685756 CCTCCGTTTTTATTTACTCCGCA 59.314 43.478 0.00 0.00 0.00 5.69
2042 2186 4.334481 CCTCCGTTTTTATTTACTCCGCAT 59.666 41.667 0.00 0.00 0.00 4.73
2043 2187 5.524646 CCTCCGTTTTTATTTACTCCGCATA 59.475 40.000 0.00 0.00 0.00 3.14
2044 2188 6.204108 CCTCCGTTTTTATTTACTCCGCATAT 59.796 38.462 0.00 0.00 0.00 1.78
2045 2189 7.255001 CCTCCGTTTTTATTTACTCCGCATATT 60.255 37.037 0.00 0.00 0.00 1.28
2046 2190 8.659925 TCCGTTTTTATTTACTCCGCATATTA 57.340 30.769 0.00 0.00 0.00 0.98
2047 2191 8.767085 TCCGTTTTTATTTACTCCGCATATTAG 58.233 33.333 0.00 0.00 0.00 1.73
2048 2192 8.553696 CCGTTTTTATTTACTCCGCATATTAGT 58.446 33.333 0.00 0.00 0.00 2.24
2049 2193 9.925268 CGTTTTTATTTACTCCGCATATTAGTT 57.075 29.630 0.00 0.00 0.00 2.24
2054 2198 9.826574 TTATTTACTCCGCATATTAGTTTGACT 57.173 29.630 0.00 0.00 0.00 3.41
2055 2199 7.534085 TTTACTCCGCATATTAGTTTGACTG 57.466 36.000 0.00 0.00 0.00 3.51
2056 2200 5.339008 ACTCCGCATATTAGTTTGACTGA 57.661 39.130 0.00 0.00 0.00 3.41
2057 2201 5.730550 ACTCCGCATATTAGTTTGACTGAA 58.269 37.500 0.00 0.00 0.00 3.02
2058 2202 5.812642 ACTCCGCATATTAGTTTGACTGAAG 59.187 40.000 0.00 0.00 0.00 3.02
2059 2203 5.730550 TCCGCATATTAGTTTGACTGAAGT 58.269 37.500 0.00 0.00 0.00 3.01
2060 2204 5.810587 TCCGCATATTAGTTTGACTGAAGTC 59.189 40.000 3.41 3.41 44.97 3.01
2117 2261 9.539825 AAAACAACATGAATATTTGCAGTAACA 57.460 25.926 0.00 0.00 0.00 2.41
2118 2262 9.539825 AAACAACATGAATATTTGCAGTAACAA 57.460 25.926 0.00 0.00 0.00 2.83
2119 2263 9.539825 AACAACATGAATATTTGCAGTAACAAA 57.460 25.926 0.00 0.00 43.27 2.83
2151 2295 9.908152 ATGATGTGTCAGAAAATATATGCAATG 57.092 29.630 0.00 0.00 37.87 2.82
2152 2296 9.122779 TGATGTGTCAGAAAATATATGCAATGA 57.877 29.630 0.00 0.00 0.00 2.57
2154 2298 9.908152 ATGTGTCAGAAAATATATGCAATGATG 57.092 29.630 0.00 0.00 0.00 3.07
2155 2299 9.122779 TGTGTCAGAAAATATATGCAATGATGA 57.877 29.630 0.00 0.00 0.00 2.92
2156 2300 9.955208 GTGTCAGAAAATATATGCAATGATGAA 57.045 29.630 0.00 0.00 0.00 2.57
2238 2382 9.836076 AAAAGTATATAAAGTTTGACTTTCGGC 57.164 29.630 9.15 0.00 44.47 5.54
2239 2383 8.556213 AAGTATATAAAGTTTGACTTTCGGCA 57.444 30.769 9.15 0.00 44.47 5.69
2240 2384 8.556213 AGTATATAAAGTTTGACTTTCGGCAA 57.444 30.769 9.15 0.00 44.47 4.52
2241 2385 9.005777 AGTATATAAAGTTTGACTTTCGGCAAA 57.994 29.630 9.15 0.00 44.47 3.68
2242 2386 9.058424 GTATATAAAGTTTGACTTTCGGCAAAC 57.942 33.333 14.24 14.24 44.47 2.93
2243 2387 3.517602 AAAGTTTGACTTTCGGCAAACC 58.482 40.909 17.45 3.50 44.47 3.27
2244 2388 2.863401 GTTTGACTTTCGGCAAACCT 57.137 45.000 11.68 0.00 44.86 3.50
2245 2389 3.974871 GTTTGACTTTCGGCAAACCTA 57.025 42.857 11.68 0.00 44.86 3.08
2246 2390 4.295857 GTTTGACTTTCGGCAAACCTAA 57.704 40.909 11.68 0.00 44.86 2.69
2247 2391 4.866921 GTTTGACTTTCGGCAAACCTAAT 58.133 39.130 11.68 0.00 44.86 1.73
2248 2392 6.004408 GTTTGACTTTCGGCAAACCTAATA 57.996 37.500 11.68 0.00 44.86 0.98
2249 2393 6.617879 GTTTGACTTTCGGCAAACCTAATAT 58.382 36.000 11.68 0.00 44.86 1.28
2250 2394 5.811399 TGACTTTCGGCAAACCTAATATG 57.189 39.130 0.00 0.00 0.00 1.78
2251 2395 5.492895 TGACTTTCGGCAAACCTAATATGA 58.507 37.500 0.00 0.00 0.00 2.15
2252 2396 5.584649 TGACTTTCGGCAAACCTAATATGAG 59.415 40.000 0.00 0.00 0.00 2.90
2253 2397 4.881850 ACTTTCGGCAAACCTAATATGAGG 59.118 41.667 4.32 4.32 42.89 3.86
2254 2398 4.764050 TTCGGCAAACCTAATATGAGGA 57.236 40.909 13.68 0.00 39.15 3.71
2255 2399 4.336889 TCGGCAAACCTAATATGAGGAG 57.663 45.455 13.68 3.64 39.15 3.69
2256 2400 3.709653 TCGGCAAACCTAATATGAGGAGT 59.290 43.478 13.68 0.00 39.15 3.85
2257 2401 4.897076 TCGGCAAACCTAATATGAGGAGTA 59.103 41.667 13.68 0.00 39.15 2.59
2258 2402 5.364446 TCGGCAAACCTAATATGAGGAGTAA 59.636 40.000 13.68 0.00 39.15 2.24
2259 2403 6.053005 CGGCAAACCTAATATGAGGAGTAAA 58.947 40.000 13.68 0.00 39.15 2.01
2260 2404 6.710744 CGGCAAACCTAATATGAGGAGTAAAT 59.289 38.462 13.68 0.00 39.15 1.40
2261 2405 7.876068 CGGCAAACCTAATATGAGGAGTAAATA 59.124 37.037 13.68 0.00 39.15 1.40
2262 2406 9.569122 GGCAAACCTAATATGAGGAGTAAATAA 57.431 33.333 13.68 0.00 39.15 1.40
2271 2415 8.904099 ATATGAGGAGTAAATAAAAACGGAGG 57.096 34.615 0.00 0.00 0.00 4.30
2272 2416 5.493809 TGAGGAGTAAATAAAAACGGAGGG 58.506 41.667 0.00 0.00 0.00 4.30
2273 2417 4.851843 AGGAGTAAATAAAAACGGAGGGG 58.148 43.478 0.00 0.00 0.00 4.79
2274 2418 3.949754 GGAGTAAATAAAAACGGAGGGGG 59.050 47.826 0.00 0.00 0.00 5.40
2275 2419 4.568380 GGAGTAAATAAAAACGGAGGGGGT 60.568 45.833 0.00 0.00 0.00 4.95
2276 2420 5.339118 GGAGTAAATAAAAACGGAGGGGGTA 60.339 44.000 0.00 0.00 0.00 3.69
2277 2421 6.331577 AGTAAATAAAAACGGAGGGGGTAT 57.668 37.500 0.00 0.00 0.00 2.73
2287 2431 1.913419 GGAGGGGGTATTTGTGAGTGA 59.087 52.381 0.00 0.00 0.00 3.41
2294 2443 4.522789 GGGGTATTTGTGAGTGACATGTTT 59.477 41.667 0.00 0.00 33.40 2.83
2298 2447 7.199766 GGTATTTGTGAGTGACATGTTTGAAA 58.800 34.615 0.00 0.00 33.40 2.69
2299 2448 7.867403 GGTATTTGTGAGTGACATGTTTGAAAT 59.133 33.333 0.00 1.71 33.40 2.17
2300 2449 7.703298 ATTTGTGAGTGACATGTTTGAAATG 57.297 32.000 0.00 0.00 33.40 2.32
2301 2450 6.448207 TTGTGAGTGACATGTTTGAAATGA 57.552 33.333 0.00 0.00 33.40 2.57
2303 2452 7.041635 TGTGAGTGACATGTTTGAAATGATT 57.958 32.000 0.00 0.00 0.00 2.57
2304 2453 8.164058 TGTGAGTGACATGTTTGAAATGATTA 57.836 30.769 0.00 0.00 0.00 1.75
2305 2454 8.291740 TGTGAGTGACATGTTTGAAATGATTAG 58.708 33.333 0.00 0.00 0.00 1.73
2306 2455 8.292448 GTGAGTGACATGTTTGAAATGATTAGT 58.708 33.333 0.00 0.00 0.00 2.24
2309 2458 9.725019 AGTGACATGTTTGAAATGATTAGTAGA 57.275 29.630 0.00 0.00 0.00 2.59
2345 2494 1.926108 AGCCTTAGACCTCACGACTT 58.074 50.000 0.00 0.00 0.00 3.01
2346 2495 1.819903 AGCCTTAGACCTCACGACTTC 59.180 52.381 0.00 0.00 0.00 3.01
2398 2547 9.407380 TCTGTAAGAATATGGTATGCATTTTGT 57.593 29.630 3.54 0.00 42.31 2.83
2421 2570 8.974060 TGTGTACTCTCTTGAAAAATAAAGGT 57.026 30.769 0.00 0.00 0.00 3.50
2422 2571 8.836413 TGTGTACTCTCTTGAAAAATAAAGGTG 58.164 33.333 0.00 0.00 0.00 4.00
2444 2593 5.645497 GTGATTTCCAATGAAGAGTAGCACT 59.355 40.000 0.00 0.00 0.00 4.40
2466 2616 7.148641 CACTAGCGATTAAGATACATCAACCT 58.851 38.462 0.00 0.00 0.00 3.50
2501 2652 9.049523 AGAACTAAACTACATGATGCATATGTG 57.950 33.333 21.85 14.41 39.03 3.21
2534 2685 8.677148 TGTTGTAGCTAAACTTCTTTCATCTT 57.323 30.769 15.26 0.00 0.00 2.40
2580 2731 9.046296 CCACTTACTAGCTTTTTCTACATATGG 57.954 37.037 7.80 0.00 0.00 2.74
2582 2733 8.769359 ACTTACTAGCTTTTTCTACATATGGGT 58.231 33.333 7.80 0.00 0.00 4.51
2587 2738 5.358160 AGCTTTTTCTACATATGGGTGCTTC 59.642 40.000 7.80 0.00 0.00 3.86
2625 2780 3.691118 ACAGATGTCCGATCCAAATTGTG 59.309 43.478 0.00 0.00 0.00 3.33
2632 2787 2.754552 CCGATCCAAATTGTGTCCATGT 59.245 45.455 0.00 0.00 0.00 3.21
2644 2799 3.243468 TGTGTCCATGTGTGCTTCATTTG 60.243 43.478 0.00 0.00 0.00 2.32
2651 2806 1.458064 GTGTGCTTCATTTGCATGTGC 59.542 47.619 0.00 0.00 42.69 4.57
2694 3152 6.071784 TGCATTAATCTATCCATGAACCATGC 60.072 38.462 0.00 0.00 40.20 4.06
2698 3156 2.509131 TCTATCCATGAACCATGCCACA 59.491 45.455 0.00 0.00 40.20 4.17
2699 3157 2.464796 ATCCATGAACCATGCCACAT 57.535 45.000 0.00 0.00 40.20 3.21
2700 3158 1.766494 TCCATGAACCATGCCACATC 58.234 50.000 0.00 0.00 40.20 3.06
2701 3159 1.005687 TCCATGAACCATGCCACATCA 59.994 47.619 0.00 0.00 40.20 3.07
2702 3160 2.036387 CCATGAACCATGCCACATCAT 58.964 47.619 0.00 0.00 40.20 2.45
2703 3161 2.035449 CCATGAACCATGCCACATCATC 59.965 50.000 0.00 0.00 40.20 2.92
2706 3164 3.163467 TGAACCATGCCACATCATCAAA 58.837 40.909 0.00 0.00 0.00 2.69
2707 3165 3.770388 TGAACCATGCCACATCATCAAAT 59.230 39.130 0.00 0.00 0.00 2.32
2712 3191 3.446310 TGCCACATCATCAAATCATGC 57.554 42.857 0.00 0.00 0.00 4.06
2717 3196 4.744631 CCACATCATCAAATCATGCATGTG 59.255 41.667 25.43 16.78 39.26 3.21
2724 3203 7.773149 TCATCAAATCATGCATGTGTTCATTA 58.227 30.769 25.43 4.73 31.15 1.90
2725 3204 7.918562 TCATCAAATCATGCATGTGTTCATTAG 59.081 33.333 25.43 9.98 31.15 1.73
2736 3215 6.566187 GCATGTGTTCATTAGCATTTTTGCAA 60.566 34.615 0.00 0.00 32.60 4.08
2737 3216 6.915544 TGTGTTCATTAGCATTTTTGCAAA 57.084 29.167 8.05 8.05 37.25 3.68
2738 3217 7.493743 TGTGTTCATTAGCATTTTTGCAAAT 57.506 28.000 13.65 0.00 37.25 2.32
2739 3218 7.574496 TGTGTTCATTAGCATTTTTGCAAATC 58.426 30.769 13.65 3.15 37.25 2.17
2741 3220 8.924691 GTGTTCATTAGCATTTTTGCAAATCTA 58.075 29.630 13.65 9.31 37.25 1.98
2764 3245 4.468713 TCAATTCAAACCATGACACCTCA 58.531 39.130 0.00 0.00 37.92 3.86
2784 3265 4.245660 TCATCAAGTCAATCACGTCTTCC 58.754 43.478 0.00 0.00 0.00 3.46
2787 3268 5.462530 TCAAGTCAATCACGTCTTCCTTA 57.537 39.130 0.00 0.00 0.00 2.69
2788 3269 5.849510 TCAAGTCAATCACGTCTTCCTTAA 58.150 37.500 0.00 0.00 0.00 1.85
2793 3288 6.766467 AGTCAATCACGTCTTCCTTAAGTTTT 59.234 34.615 0.97 0.00 34.13 2.43
2799 3294 9.893305 ATCACGTCTTCCTTAAGTTTTTATTTG 57.107 29.630 0.97 0.00 34.13 2.32
2860 3355 9.859427 CTATTGTTTCTGAAATGCAAAATAGGA 57.141 29.630 6.06 0.00 0.00 2.94
2862 3357 7.945033 TGTTTCTGAAATGCAAAATAGGAAC 57.055 32.000 6.06 0.00 0.00 3.62
2865 3360 8.992073 GTTTCTGAAATGCAAAATAGGAACAAT 58.008 29.630 6.06 0.00 0.00 2.71
2867 3362 8.537049 TCTGAAATGCAAAATAGGAACAATTG 57.463 30.769 3.24 3.24 0.00 2.32
2868 3363 7.118101 TCTGAAATGCAAAATAGGAACAATTGC 59.882 33.333 5.05 2.07 44.93 3.56
2872 3367 4.900664 GCAAAATAGGAACAATTGCATGC 58.099 39.130 11.82 11.82 44.29 4.06
2873 3368 4.201841 GCAAAATAGGAACAATTGCATGCC 60.202 41.667 16.68 1.90 44.29 4.40
2874 3369 3.441496 AATAGGAACAATTGCATGCCG 57.559 42.857 16.68 3.50 0.00 5.69
2875 3370 0.455410 TAGGAACAATTGCATGCCGC 59.545 50.000 16.68 0.00 42.89 6.53
2884 3379 4.810730 GCATGCCGCATAAGCAAA 57.189 50.000 6.36 0.00 44.83 3.68
2885 3380 2.290883 GCATGCCGCATAAGCAAAC 58.709 52.632 6.36 0.00 44.83 2.93
2886 3381 0.458197 GCATGCCGCATAAGCAAACA 60.458 50.000 6.36 0.00 44.83 2.83
2887 3382 1.270971 CATGCCGCATAAGCAAACAC 58.729 50.000 5.31 0.00 44.83 3.32
2889 3384 0.958091 TGCCGCATAAGCAAACACTT 59.042 45.000 0.00 0.00 42.27 3.16
2895 3390 5.399301 GCCGCATAAGCAAACACTTATAATG 59.601 40.000 0.00 0.00 40.14 1.90
2922 3872 9.155975 GTACAATGAGAAATCATGTGTTCTAGT 57.844 33.333 11.85 10.78 34.23 2.57
2928 3878 9.942850 TGAGAAATCATGTGTTCTAGTATCAAA 57.057 29.630 11.85 0.00 34.23 2.69
2947 3897 9.191995 GTATCAAACACCTTTTAGGAATTTGTG 57.808 33.333 17.64 0.00 40.86 3.33
2949 3899 8.017418 TCAAACACCTTTTAGGAATTTGTGAT 57.983 30.769 17.64 0.00 40.86 3.06
2951 3901 7.595819 AACACCTTTTAGGAATTTGTGATCA 57.404 32.000 0.00 0.00 37.67 2.92
2952 3902 7.595819 ACACCTTTTAGGAATTTGTGATCAA 57.404 32.000 0.00 0.00 37.67 2.57
2953 3903 8.017418 ACACCTTTTAGGAATTTGTGATCAAA 57.983 30.769 0.00 0.00 41.66 2.69
2954 3904 8.650490 ACACCTTTTAGGAATTTGTGATCAAAT 58.350 29.630 0.00 0.00 45.22 2.32
2955 3905 8.928733 CACCTTTTAGGAATTTGTGATCAAATG 58.071 33.333 0.00 0.00 44.03 2.32
2956 3906 8.096414 ACCTTTTAGGAATTTGTGATCAAATGG 58.904 33.333 0.00 0.00 44.03 3.16
2969 3919 8.993404 TGTGATCAAATGGTCAATATATTGGA 57.007 30.769 22.31 11.80 38.30 3.53
2970 3920 9.418839 TGTGATCAAATGGTCAATATATTGGAA 57.581 29.630 22.31 10.73 38.30 3.53
2980 3930 9.699410 TGGTCAATATATTGGAAATTTCACTCT 57.301 29.630 22.31 4.15 38.30 3.24
2982 3932 9.869844 GTCAATATATTGGAAATTTCACTCTCG 57.130 33.333 22.31 0.44 38.30 4.04
2983 3933 9.613428 TCAATATATTGGAAATTTCACTCTCGT 57.387 29.630 22.31 2.50 38.30 4.18
2986 3936 7.787725 ATATTGGAAATTTCACTCTCGTACC 57.212 36.000 19.49 0.00 0.00 3.34
2987 3937 4.610605 TGGAAATTTCACTCTCGTACCA 57.389 40.909 19.49 2.41 0.00 3.25
2988 3938 4.963373 TGGAAATTTCACTCTCGTACCAA 58.037 39.130 19.49 0.00 0.00 3.67
3038 3988 7.156876 CTTGAACTCCAATACAAGGCAATAA 57.843 36.000 0.00 0.00 36.92 1.40
3041 3991 7.546358 TGAACTCCAATACAAGGCAATAATTG 58.454 34.615 0.00 0.00 0.00 2.32
3047 3997 7.836685 TCCAATACAAGGCAATAATTGACCTTA 59.163 33.333 8.98 0.00 41.76 2.69
3051 4001 7.775053 ACAAGGCAATAATTGACCTTAAAGA 57.225 32.000 8.98 0.00 41.76 2.52
3074 4024 4.828072 TTTAAACCTGGCAAAGTTGGTT 57.172 36.364 2.50 2.50 43.73 3.67
3093 4043 8.316214 AGTTGGTTCCTAATATTAGTCGAAACA 58.684 33.333 19.87 19.87 31.36 2.83
3107 4065 5.067273 AGTCGAAACAAATGATGGTGGTAA 58.933 37.500 0.00 0.00 0.00 2.85
3111 4069 6.432783 TCGAAACAAATGATGGTGGTAATCTT 59.567 34.615 0.00 0.00 0.00 2.40
3124 4082 2.428114 GTAATCTTGCACGCGTTTAGC 58.572 47.619 10.22 11.71 43.95 3.09
3145 4104 3.500982 CACAATTAGAATGTTGGTGGCG 58.499 45.455 0.00 0.00 0.00 5.69
3154 4113 4.949856 AGAATGTTGGTGGCGAGATATTTT 59.050 37.500 0.00 0.00 0.00 1.82
3163 4122 8.684386 TGGTGGCGAGATATTTTATATTGAAA 57.316 30.769 0.00 0.00 0.00 2.69
3175 4134 8.760980 ATTTTATATTGAAATTGAGGGGTCGA 57.239 30.769 0.00 0.00 0.00 4.20
3176 4135 8.760980 TTTTATATTGAAATTGAGGGGTCGAT 57.239 30.769 0.00 0.00 0.00 3.59
3177 4136 9.854668 TTTTATATTGAAATTGAGGGGTCGATA 57.145 29.630 0.00 0.00 0.00 2.92
3183 4142 6.184068 TGAAATTGAGGGGTCGATATTTCAA 58.816 36.000 0.00 7.51 38.39 2.69
3510 5218 0.713883 CTACTAACTGTGCCGTTGCG 59.286 55.000 0.00 0.00 41.78 4.85
3521 5229 2.030562 CGTTGCGTTGTCCCCTCT 59.969 61.111 0.00 0.00 0.00 3.69
3523 5232 0.320073 CGTTGCGTTGTCCCCTCTTA 60.320 55.000 0.00 0.00 0.00 2.10
3578 5287 1.499056 CGTGCGCTCAATGCTTCTT 59.501 52.632 9.73 0.00 40.11 2.52
3593 5302 2.229062 GCTTCTTGTCAACTTAAGGCCC 59.771 50.000 7.53 0.00 0.00 5.80
3638 5347 7.815068 AGACAATATAATCTCGGTAACATGCTC 59.185 37.037 0.00 0.00 0.00 4.26
3701 5410 7.862372 ACAATTACACAGTTAATGCAGTTTGAG 59.138 33.333 0.00 0.00 0.00 3.02
3768 5477 6.817641 TGTAAATGGCATCAATTTTCCATCAC 59.182 34.615 0.00 0.00 38.28 3.06
3770 5479 3.087781 TGGCATCAATTTTCCATCACGA 58.912 40.909 0.00 0.00 0.00 4.35
3772 5481 4.160065 TGGCATCAATTTTCCATCACGAAT 59.840 37.500 0.00 0.00 0.00 3.34
3843 5552 1.490490 GCACTGGGGTCATAAGGATCA 59.510 52.381 0.00 0.00 0.00 2.92
3903 5613 4.413495 TTCGGACAAAATGAATTCGGTC 57.587 40.909 0.04 3.67 0.00 4.79
3906 5616 4.153475 TCGGACAAAATGAATTCGGTCTTC 59.847 41.667 0.04 0.00 0.00 2.87
3924 5634 5.416947 GTCTTCCCGTAATAAAGCTGAAGA 58.583 41.667 3.89 3.89 35.63 2.87
3929 5639 7.356089 TCCCGTAATAAAGCTGAAGAATAGA 57.644 36.000 0.00 0.00 0.00 1.98
3945 5656 6.910536 AGAATAGAATGGTTTCTTGCTACG 57.089 37.500 0.00 0.00 42.29 3.51
4187 5898 5.070685 ACTGAAGGTAACATTTTGGTCCTC 58.929 41.667 0.00 0.00 41.41 3.71
4191 5902 4.398319 AGGTAACATTTTGGTCCTCTGTG 58.602 43.478 0.00 0.00 41.41 3.66
4235 5946 8.814038 AACATTTAGCTATCCAAGAGAAATGT 57.186 30.769 11.00 11.00 45.02 2.71
4237 5948 9.247861 ACATTTAGCTATCCAAGAGAAATGTTT 57.752 29.630 11.00 0.00 42.96 2.83
4252 5963 2.192664 TGTTTGGCGGCTAATTCTCA 57.807 45.000 11.43 0.00 0.00 3.27
4298 6009 9.108111 TCTTAACTATCCTGTTTTCTAAAGGGA 57.892 33.333 0.00 0.00 0.00 4.20
4311 6029 2.337879 AAAGGGACCGCTGCACTCAA 62.338 55.000 0.00 0.00 0.00 3.02
4347 6065 1.538512 GGGTTCTTGTTTCTAACGGCC 59.461 52.381 0.00 0.00 0.00 6.13
4432 6150 1.647346 TATCGTTCGCCAACATGACC 58.353 50.000 0.00 0.00 32.14 4.02
4527 6245 7.122799 GCCAGAAGTAAGTCCTCCAAAAATATT 59.877 37.037 0.00 0.00 0.00 1.28
4579 6297 4.625311 TGATATGTTAGTGTCTTGTGTGCG 59.375 41.667 0.00 0.00 0.00 5.34
4595 6313 2.490115 TGTGCGCCAGGGTTAAATAAAG 59.510 45.455 4.18 0.00 0.00 1.85
4596 6314 2.490509 GTGCGCCAGGGTTAAATAAAGT 59.509 45.455 4.18 0.00 0.00 2.66
4597 6315 3.690628 GTGCGCCAGGGTTAAATAAAGTA 59.309 43.478 4.18 0.00 0.00 2.24
4598 6316 3.690628 TGCGCCAGGGTTAAATAAAGTAC 59.309 43.478 4.18 0.00 0.00 2.73
4599 6317 3.943381 GCGCCAGGGTTAAATAAAGTACT 59.057 43.478 0.00 0.00 0.00 2.73
4600 6318 4.034858 GCGCCAGGGTTAAATAAAGTACTC 59.965 45.833 0.00 0.00 0.00 2.59
4601 6319 4.573607 CGCCAGGGTTAAATAAAGTACTCC 59.426 45.833 0.00 0.00 0.00 3.85
4602 6320 4.885907 GCCAGGGTTAAATAAAGTACTCCC 59.114 45.833 0.00 0.00 0.00 4.30
4603 6321 5.339778 GCCAGGGTTAAATAAAGTACTCCCT 60.340 44.000 8.39 8.39 43.92 4.20
4604 6322 6.354938 CCAGGGTTAAATAAAGTACTCCCTC 58.645 44.000 10.78 0.00 41.58 4.30
4605 6323 6.069847 CCAGGGTTAAATAAAGTACTCCCTCA 60.070 42.308 10.78 0.00 41.58 3.86
4606 6324 7.048512 CAGGGTTAAATAAAGTACTCCCTCAG 58.951 42.308 10.78 0.00 41.58 3.35
4607 6325 6.734281 AGGGTTAAATAAAGTACTCCCTCAGT 59.266 38.462 8.39 0.00 39.68 3.41
4608 6326 7.046652 GGGTTAAATAAAGTACTCCCTCAGTC 58.953 42.308 0.00 0.00 36.43 3.51
4609 6327 7.046652 GGTTAAATAAAGTACTCCCTCAGTCC 58.953 42.308 0.00 0.00 36.43 3.85
4610 6328 5.695424 AAATAAAGTACTCCCTCAGTCCC 57.305 43.478 0.00 0.00 36.43 4.46
4611 6329 2.715763 AAAGTACTCCCTCAGTCCCA 57.284 50.000 0.00 0.00 36.43 4.37
4612 6330 1.939980 AAGTACTCCCTCAGTCCCAC 58.060 55.000 0.00 0.00 36.43 4.61
4613 6331 0.784495 AGTACTCCCTCAGTCCCACA 59.216 55.000 0.00 0.00 36.43 4.17
4614 6332 1.149288 AGTACTCCCTCAGTCCCACAA 59.851 52.381 0.00 0.00 36.43 3.33
4615 6333 2.188817 GTACTCCCTCAGTCCCACAAT 58.811 52.381 0.00 0.00 36.43 2.71
4616 6334 2.642171 ACTCCCTCAGTCCCACAATA 57.358 50.000 0.00 0.00 0.00 1.90
4617 6335 3.136641 ACTCCCTCAGTCCCACAATAT 57.863 47.619 0.00 0.00 0.00 1.28
4618 6336 4.280789 ACTCCCTCAGTCCCACAATATA 57.719 45.455 0.00 0.00 0.00 0.86
4619 6337 4.631234 ACTCCCTCAGTCCCACAATATAA 58.369 43.478 0.00 0.00 0.00 0.98
4620 6338 4.656112 ACTCCCTCAGTCCCACAATATAAG 59.344 45.833 0.00 0.00 0.00 1.73
4621 6339 4.890988 TCCCTCAGTCCCACAATATAAGA 58.109 43.478 0.00 0.00 0.00 2.10
4622 6340 4.654262 TCCCTCAGTCCCACAATATAAGAC 59.346 45.833 0.00 0.00 0.00 3.01
4623 6341 4.501571 CCCTCAGTCCCACAATATAAGACG 60.502 50.000 0.00 0.00 32.70 4.18
4624 6342 4.099573 CCTCAGTCCCACAATATAAGACGT 59.900 45.833 0.00 0.00 32.70 4.34
4625 6343 5.395324 CCTCAGTCCCACAATATAAGACGTT 60.395 44.000 0.00 0.00 32.70 3.99
4626 6344 6.045072 TCAGTCCCACAATATAAGACGTTT 57.955 37.500 0.00 0.00 32.70 3.60
4627 6345 6.469410 TCAGTCCCACAATATAAGACGTTTT 58.531 36.000 0.00 0.00 32.70 2.43
4628 6346 6.938030 TCAGTCCCACAATATAAGACGTTTTT 59.062 34.615 0.00 0.00 32.70 1.94
4629 6347 7.021196 CAGTCCCACAATATAAGACGTTTTTG 58.979 38.462 0.00 0.00 32.70 2.44
4630 6348 5.798434 GTCCCACAATATAAGACGTTTTTGC 59.202 40.000 0.00 0.00 0.00 3.68
4631 6349 5.473846 TCCCACAATATAAGACGTTTTTGCA 59.526 36.000 0.00 0.00 0.00 4.08
4632 6350 6.016192 TCCCACAATATAAGACGTTTTTGCAA 60.016 34.615 0.00 0.00 0.00 4.08
4633 6351 6.307800 CCCACAATATAAGACGTTTTTGCAAG 59.692 38.462 0.00 0.00 0.00 4.01
4634 6352 6.183359 CCACAATATAAGACGTTTTTGCAAGC 60.183 38.462 0.00 0.00 0.00 4.01
4635 6353 6.582295 CACAATATAAGACGTTTTTGCAAGCT 59.418 34.615 0.00 0.00 0.00 3.74
4636 6354 7.748683 CACAATATAAGACGTTTTTGCAAGCTA 59.251 33.333 0.00 0.00 0.00 3.32
4637 6355 8.458843 ACAATATAAGACGTTTTTGCAAGCTAT 58.541 29.630 0.00 0.00 0.00 2.97
4638 6356 9.929722 CAATATAAGACGTTTTTGCAAGCTATA 57.070 29.630 0.00 0.00 0.00 1.31
4644 6362 8.438676 AGACGTTTTTGCAAGCTATATTATCT 57.561 30.769 0.00 0.00 0.00 1.98
4645 6363 8.893727 AGACGTTTTTGCAAGCTATATTATCTT 58.106 29.630 0.00 0.00 0.00 2.40
4646 6364 8.841444 ACGTTTTTGCAAGCTATATTATCTTG 57.159 30.769 0.00 0.00 39.95 3.02
4647 6365 8.673711 ACGTTTTTGCAAGCTATATTATCTTGA 58.326 29.630 0.00 0.00 39.48 3.02
4648 6366 9.502145 CGTTTTTGCAAGCTATATTATCTTGAA 57.498 29.630 0.00 2.98 39.48 2.69
4673 6391 8.502105 AAAAACGTCTTATTATGGGAAGTAGG 57.498 34.615 0.00 0.00 0.00 3.18
4674 6392 5.803237 ACGTCTTATTATGGGAAGTAGGG 57.197 43.478 0.00 0.00 0.00 3.53
4675 6393 5.461327 ACGTCTTATTATGGGAAGTAGGGA 58.539 41.667 0.00 0.00 0.00 4.20
4676 6394 5.539193 ACGTCTTATTATGGGAAGTAGGGAG 59.461 44.000 0.00 0.00 0.00 4.30
4728 6447 6.884832 TCATATCCGTCAAGTATTTCCTTGT 58.115 36.000 0.00 0.00 42.01 3.16
4859 6581 3.560453 GCATAGGTAGGGGTGTTCAAACA 60.560 47.826 0.00 0.00 36.38 2.83
4969 6691 1.856802 CGGTTAGGGCCGTACATAAC 58.143 55.000 4.22 2.35 46.11 1.89
5019 6741 4.837093 TGAACAACCCTGGGTATAGAAG 57.163 45.455 20.91 7.71 33.12 2.85
5024 6746 4.850386 ACAACCCTGGGTATAGAAGTTCTT 59.150 41.667 20.91 0.00 33.12 2.52
5053 6775 6.258727 CCAGGTATTTATAAGTGTGTGCTGAG 59.741 42.308 0.00 0.00 0.00 3.35
5100 6822 3.440173 AGGTCGAAGTGTTTTATGGCATG 59.560 43.478 10.98 0.00 0.00 4.06
5117 6839 4.586421 TGGCATGGAGTTTGTGTTAATTCA 59.414 37.500 0.00 0.00 0.00 2.57
5272 6994 7.345691 TGTTGAATCCCTTGAGCATATTAAGA 58.654 34.615 0.00 0.00 0.00 2.10
5326 7048 4.827284 GGAAGGCCTAAAGCTATTTGCATA 59.173 41.667 5.16 0.00 45.94 3.14
5357 7079 8.764287 CAACATATTCATGATTTCGCTACTGTA 58.236 33.333 0.00 0.00 35.96 2.74
5367 7089 5.794687 TTTCGCTACTGTACCATTCAATG 57.205 39.130 0.00 0.00 0.00 2.82
5391 7113 6.901300 TGTTACTGATGGACTATACTCCCTTT 59.099 38.462 0.00 0.00 0.00 3.11
5392 7114 8.063153 TGTTACTGATGGACTATACTCCCTTTA 58.937 37.037 0.00 0.00 0.00 1.85
5400 7122 7.136885 TGGACTATACTCCCTTTATCCAGAAA 58.863 38.462 0.00 0.00 31.45 2.52
5410 7132 6.011981 TCCCTTTATCCAGAAATGTAAGGTGT 60.012 38.462 0.00 0.00 31.03 4.16
5444 7187 0.313043 AGTCAACGACCACCAGTACG 59.687 55.000 0.00 0.00 32.18 3.67
5511 7256 8.959548 TGTATGTCTTGCAATATTCATTTCTGT 58.040 29.630 0.00 0.00 0.00 3.41
5576 7322 9.853555 AAAATTATAGTCAAAATCGTGCATTCA 57.146 25.926 0.00 0.00 0.00 2.57
5582 7328 4.614284 GTCAAAATCGTGCATTCAAGACTG 59.386 41.667 0.00 0.00 33.71 3.51
5583 7329 4.514816 TCAAAATCGTGCATTCAAGACTGA 59.485 37.500 0.00 0.00 33.71 3.41
5584 7330 5.008514 TCAAAATCGTGCATTCAAGACTGAA 59.991 36.000 0.00 0.00 45.53 3.02
5587 7333 4.472691 TCGTGCATTCAAGACTGAAAAG 57.527 40.909 0.00 0.00 44.64 2.27
5588 7334 3.876914 TCGTGCATTCAAGACTGAAAAGT 59.123 39.130 0.00 0.00 44.64 2.66
5589 7335 4.024893 TCGTGCATTCAAGACTGAAAAGTC 60.025 41.667 0.00 0.00 44.64 3.01
5590 7336 4.260743 CGTGCATTCAAGACTGAAAAGTCA 60.261 41.667 8.47 0.00 44.64 3.41
5591 7337 5.581605 GTGCATTCAAGACTGAAAAGTCAA 58.418 37.500 8.47 0.00 44.64 3.18
5609 7355 3.670055 GTCAAACATGTCTTGCATTTCCG 59.330 43.478 0.00 0.00 35.19 4.30
5627 7373 3.355378 TCCGACGAAGGGAGTATGTTTA 58.645 45.455 0.00 0.00 0.00 2.01
5658 7404 3.857157 ACCTAGAAACTCAACCAGCAA 57.143 42.857 0.00 0.00 0.00 3.91
5693 7439 2.402564 TGGCTCAGGATTTCCTAGAGG 58.597 52.381 19.06 0.00 46.65 3.69
5774 7521 5.482908 ACTATTGACTCACCTTGTGTCATC 58.517 41.667 10.85 0.00 46.17 2.92
5779 7526 0.107643 TCACCTTGTGTCATCCGCAA 59.892 50.000 0.00 0.00 41.14 4.85
5786 7533 2.293170 TGTGTCATCCGCAAAACAGAA 58.707 42.857 0.00 0.00 0.00 3.02
5788 7535 3.129462 TGTGTCATCCGCAAAACAGAAAA 59.871 39.130 0.00 0.00 0.00 2.29
5798 7545 4.085312 CGCAAAACAGAAAATAAACACCCG 60.085 41.667 0.00 0.00 0.00 5.28
5849 7596 7.182026 TCCATAAGGAAATCAGTAAGGTTCTCA 59.818 37.037 0.00 0.00 42.23 3.27
5909 7656 9.421399 TCTTTCTTTAACTTTTCCTGGAAAGAT 57.579 29.630 20.25 13.39 40.92 2.40
5926 7674 9.947669 CTGGAAAGATAAAGAAGAAGCATTATG 57.052 33.333 0.00 0.00 0.00 1.90
5970 7718 1.814394 TGTACGGCGTACTCTGAACAT 59.186 47.619 39.53 7.56 39.49 2.71
6029 7777 8.519492 ACTCAAAATTTCCATTGATTTACACG 57.481 30.769 0.00 0.00 35.20 4.49
6050 7800 7.671827 ACACGAAAAGAAACTAAAACAAATGC 58.328 30.769 0.00 0.00 0.00 3.56
6051 7801 7.329717 ACACGAAAAGAAACTAAAACAAATGCA 59.670 29.630 0.00 0.00 0.00 3.96
6097 7848 9.426837 CAATATGACCAACAAGAATTTCATTGT 57.573 29.630 0.00 4.23 41.28 2.71
6136 7887 7.472334 AAGCCAAAAGACATAATCAATCTGT 57.528 32.000 0.00 0.00 0.00 3.41
6137 7888 7.472334 AGCCAAAAGACATAATCAATCTGTT 57.528 32.000 0.00 0.00 0.00 3.16
6138 7889 7.899973 AGCCAAAAGACATAATCAATCTGTTT 58.100 30.769 0.00 0.00 0.00 2.83
6139 7890 8.031277 AGCCAAAAGACATAATCAATCTGTTTC 58.969 33.333 0.00 0.00 0.00 2.78
6140 7891 7.276438 GCCAAAAGACATAATCAATCTGTTTCC 59.724 37.037 0.00 0.00 0.00 3.13
6141 7892 8.306038 CCAAAAGACATAATCAATCTGTTTCCA 58.694 33.333 0.00 0.00 0.00 3.53
6142 7893 9.865321 CAAAAGACATAATCAATCTGTTTCCAT 57.135 29.630 0.00 0.00 0.00 3.41
6144 7895 8.812513 AAGACATAATCAATCTGTTTCCATCA 57.187 30.769 0.00 0.00 0.00 3.07
6145 7896 8.447924 AGACATAATCAATCTGTTTCCATCAG 57.552 34.615 0.00 0.00 0.00 2.90
6146 7897 8.270030 AGACATAATCAATCTGTTTCCATCAGA 58.730 33.333 0.00 0.00 44.37 3.27
6147 7898 8.812513 ACATAATCAATCTGTTTCCATCAGAA 57.187 30.769 0.00 0.00 43.65 3.02
6148 7899 9.246670 ACATAATCAATCTGTTTCCATCAGAAA 57.753 29.630 0.00 0.00 43.65 2.52
6151 7902 8.997621 AATCAATCTGTTTCCATCAGAAAATG 57.002 30.769 0.00 0.00 45.93 2.32
6152 7903 6.392354 TCAATCTGTTTCCATCAGAAAATGC 58.608 36.000 0.00 0.00 45.93 3.56
6153 7904 6.209986 TCAATCTGTTTCCATCAGAAAATGCT 59.790 34.615 0.00 0.00 45.93 3.79
6154 7905 6.600882 ATCTGTTTCCATCAGAAAATGCTT 57.399 33.333 0.00 0.00 45.93 3.91
6215 7966 6.864165 CAGTAGTCTTTAGAACACTCCAGTTC 59.136 42.308 0.00 0.00 46.35 3.01
6251 8002 1.081892 CAACTTCCACAGCCTCATCG 58.918 55.000 0.00 0.00 0.00 3.84
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 21 6.735130 ACGGTCAAAGTTGAATTTTAGGAAG 58.265 36.000 0.00 0.00 39.21 3.46
185 187 2.010145 ATAAGACGCACACGCATCTT 57.990 45.000 1.22 1.22 45.53 2.40
186 188 1.927174 GAATAAGACGCACACGCATCT 59.073 47.619 0.00 0.00 45.53 2.90
191 193 4.201812 ATTCCAATGAATAAGACGCACACG 60.202 41.667 0.00 0.00 41.52 4.49
194 196 4.335315 TCCATTCCAATGAATAAGACGCAC 59.665 41.667 0.56 0.00 39.20 5.34
198 200 5.694995 TCCCTCCATTCCAATGAATAAGAC 58.305 41.667 0.56 0.00 39.20 3.01
285 291 8.871629 TCACTTTAAGTGGGATTATGCTTAAA 57.128 30.769 22.82 0.00 45.94 1.52
374 380 9.142515 CAACAACATTTATTCTTGTGTGCATAT 57.857 29.630 0.00 0.00 0.00 1.78
593 631 9.320352 ACTATTTTTACCAAAAGCGAAATTGTT 57.680 25.926 0.00 0.00 35.30 2.83
598 636 9.968870 ATGTAACTATTTTTACCAAAAGCGAAA 57.031 25.926 0.00 0.00 35.30 3.46
601 639 9.828852 TGTATGTAACTATTTTTACCAAAAGCG 57.171 29.630 0.00 0.00 35.30 4.68
615 653 9.982651 GAGGTACAATCATGTGTATGTAACTAT 57.017 33.333 15.31 2.20 44.14 2.12
617 655 7.847096 TGAGGTACAATCATGTGTATGTAACT 58.153 34.615 15.28 15.28 46.12 2.24
620 658 7.616313 TGTTGAGGTACAATCATGTGTATGTA 58.384 34.615 0.00 0.44 40.84 2.29
621 659 6.472016 TGTTGAGGTACAATCATGTGTATGT 58.528 36.000 0.00 1.26 40.84 2.29
622 660 6.983474 TGTTGAGGTACAATCATGTGTATG 57.017 37.500 0.00 0.00 40.84 2.39
624 662 6.072728 GCTTTGTTGAGGTACAATCATGTGTA 60.073 38.462 0.00 0.00 40.84 2.90
627 665 4.083324 CGCTTTGTTGAGGTACAATCATGT 60.083 41.667 0.00 0.00 43.74 3.21
628 666 4.154015 TCGCTTTGTTGAGGTACAATCATG 59.846 41.667 0.00 0.00 40.76 3.07
640 736 4.674662 CGTCAAATTTGATCGCTTTGTTGA 59.325 37.500 23.05 0.00 39.73 3.18
696 796 2.733956 TGTACAATGGAAAGGGATGGC 58.266 47.619 0.00 0.00 0.00 4.40
698 798 4.881273 TCGATTGTACAATGGAAAGGGATG 59.119 41.667 25.45 5.24 33.57 3.51
710 810 9.184062 GATATGGTATTAACGTCGATTGTACAA 57.816 33.333 11.41 11.41 0.00 2.41
803 903 1.329171 CCCAGAGGAGAGACTGCTGG 61.329 65.000 0.00 0.00 44.40 4.85
804 904 1.958902 GCCCAGAGGAGAGACTGCTG 61.959 65.000 0.00 0.00 30.82 4.41
805 905 1.685421 GCCCAGAGGAGAGACTGCT 60.685 63.158 0.00 0.00 34.11 4.24
806 906 2.730524 GGCCCAGAGGAGAGACTGC 61.731 68.421 0.00 0.00 33.47 4.40
834 934 5.772521 CTGCCAACTAAAAGTGTTAATGCT 58.227 37.500 0.00 0.00 0.00 3.79
858 958 2.095008 TGCTTCACGTCTCTTCTGCTAG 60.095 50.000 0.00 0.00 0.00 3.42
880 980 5.622346 AGGAAGAACCATATCCTTGTCTC 57.378 43.478 0.00 0.00 40.70 3.36
901 1001 7.083875 TGGTCAGCTCCGATTTTAAATTAAG 57.916 36.000 0.00 0.00 0.00 1.85
903 1003 7.201785 GGATTGGTCAGCTCCGATTTTAAATTA 60.202 37.037 0.00 0.00 32.23 1.40
979 1079 5.626132 CCATTTTTGCTGCTTAATTGTTTGC 59.374 36.000 0.00 0.00 0.00 3.68
1072 1174 4.479993 CCCCAGCTCTGCTTCCGG 62.480 72.222 0.00 0.00 36.40 5.14
1370 1498 2.738521 CCTTGTCCGTCACCTGCG 60.739 66.667 0.00 0.00 0.00 5.18
1599 1727 3.490759 GAGTGGTGCACGCGGATG 61.491 66.667 12.47 0.56 39.64 3.51
1765 1905 4.129737 CCAGACCCACGCGACGAT 62.130 66.667 15.93 0.00 0.00 3.73
2009 2153 7.506328 AAATAAAAACGGAGGGAGTATATGC 57.494 36.000 0.00 0.00 0.00 3.14
2010 2154 9.774413 AGTAAATAAAAACGGAGGGAGTATATG 57.226 33.333 0.00 0.00 0.00 1.78
2011 2155 9.993454 GAGTAAATAAAAACGGAGGGAGTATAT 57.007 33.333 0.00 0.00 0.00 0.86
2012 2156 8.424133 GGAGTAAATAAAAACGGAGGGAGTATA 58.576 37.037 0.00 0.00 0.00 1.47
2016 2160 4.569564 CGGAGTAAATAAAAACGGAGGGAG 59.430 45.833 0.00 0.00 0.00 4.30
2017 2161 4.506758 CGGAGTAAATAAAAACGGAGGGA 58.493 43.478 0.00 0.00 0.00 4.20
2018 2162 3.064408 GCGGAGTAAATAAAAACGGAGGG 59.936 47.826 0.00 0.00 0.00 4.30
2019 2163 3.685756 TGCGGAGTAAATAAAAACGGAGG 59.314 43.478 0.00 0.00 0.00 4.30
2020 2164 4.932268 TGCGGAGTAAATAAAAACGGAG 57.068 40.909 0.00 0.00 0.00 4.63
2021 2165 7.556733 AATATGCGGAGTAAATAAAAACGGA 57.443 32.000 0.00 0.00 0.00 4.69
2022 2166 8.553696 ACTAATATGCGGAGTAAATAAAAACGG 58.446 33.333 0.00 0.00 0.00 4.44
2023 2167 9.925268 AACTAATATGCGGAGTAAATAAAAACG 57.075 29.630 0.00 0.00 0.00 3.60
2028 2172 9.826574 AGTCAAACTAATATGCGGAGTAAATAA 57.173 29.630 0.00 0.00 0.00 1.40
2029 2173 9.256477 CAGTCAAACTAATATGCGGAGTAAATA 57.744 33.333 0.00 0.00 0.00 1.40
2030 2174 7.985184 TCAGTCAAACTAATATGCGGAGTAAAT 59.015 33.333 0.00 0.00 0.00 1.40
2031 2175 7.324935 TCAGTCAAACTAATATGCGGAGTAAA 58.675 34.615 0.00 0.00 0.00 2.01
2032 2176 6.869695 TCAGTCAAACTAATATGCGGAGTAA 58.130 36.000 0.00 0.00 0.00 2.24
2033 2177 6.459670 TCAGTCAAACTAATATGCGGAGTA 57.540 37.500 0.00 0.00 0.00 2.59
2034 2178 5.339008 TCAGTCAAACTAATATGCGGAGT 57.661 39.130 0.00 0.00 0.00 3.85
2035 2179 5.812642 ACTTCAGTCAAACTAATATGCGGAG 59.187 40.000 0.00 0.00 0.00 4.63
2036 2180 5.730550 ACTTCAGTCAAACTAATATGCGGA 58.269 37.500 0.00 0.00 0.00 5.54
2037 2181 6.037423 GACTTCAGTCAAACTAATATGCGG 57.963 41.667 1.86 0.00 44.18 5.69
2091 2235 9.539825 TGTTACTGCAAATATTCATGTTGTTTT 57.460 25.926 0.00 0.00 0.00 2.43
2092 2236 9.539825 TTGTTACTGCAAATATTCATGTTGTTT 57.460 25.926 0.00 0.00 0.00 2.83
2093 2237 9.539825 TTTGTTACTGCAAATATTCATGTTGTT 57.460 25.926 0.00 0.00 33.91 2.83
2094 2238 9.709495 ATTTGTTACTGCAAATATTCATGTTGT 57.291 25.926 2.65 0.00 44.40 3.32
2125 2269 9.908152 CATTGCATATATTTTCTGACACATCAT 57.092 29.630 0.00 0.00 33.22 2.45
2126 2270 9.122779 TCATTGCATATATTTTCTGACACATCA 57.877 29.630 0.00 0.00 0.00 3.07
2128 2272 9.908152 CATCATTGCATATATTTTCTGACACAT 57.092 29.630 0.00 0.00 0.00 3.21
2129 2273 9.122779 TCATCATTGCATATATTTTCTGACACA 57.877 29.630 0.00 0.00 0.00 3.72
2130 2274 9.955208 TTCATCATTGCATATATTTTCTGACAC 57.045 29.630 0.00 0.00 0.00 3.67
2223 2367 2.758423 AGGTTTGCCGAAAGTCAAACTT 59.242 40.909 14.77 7.09 46.62 2.66
2224 2368 2.375146 AGGTTTGCCGAAAGTCAAACT 58.625 42.857 14.77 0.00 46.62 2.66
2225 2369 2.863401 AGGTTTGCCGAAAGTCAAAC 57.137 45.000 8.77 8.77 46.68 2.93
2226 2370 6.431543 TCATATTAGGTTTGCCGAAAGTCAAA 59.568 34.615 0.00 0.00 40.50 2.69
2227 2371 5.941058 TCATATTAGGTTTGCCGAAAGTCAA 59.059 36.000 0.00 0.00 40.50 3.18
2228 2372 5.492895 TCATATTAGGTTTGCCGAAAGTCA 58.507 37.500 0.00 0.00 40.50 3.41
2229 2373 5.007724 CCTCATATTAGGTTTGCCGAAAGTC 59.992 44.000 0.00 0.00 40.50 3.01
2230 2374 4.881850 CCTCATATTAGGTTTGCCGAAAGT 59.118 41.667 0.00 0.00 40.50 2.66
2231 2375 5.123227 TCCTCATATTAGGTTTGCCGAAAG 58.877 41.667 2.85 0.00 40.50 2.62
2232 2376 5.105567 TCCTCATATTAGGTTTGCCGAAA 57.894 39.130 2.85 0.00 40.50 3.46
2233 2377 4.163458 ACTCCTCATATTAGGTTTGCCGAA 59.837 41.667 2.85 0.00 40.50 4.30
2234 2378 3.709653 ACTCCTCATATTAGGTTTGCCGA 59.290 43.478 2.85 0.00 40.50 5.54
2235 2379 4.073293 ACTCCTCATATTAGGTTTGCCG 57.927 45.455 2.85 0.00 40.50 5.69
2236 2380 9.569122 TTATTTACTCCTCATATTAGGTTTGCC 57.431 33.333 2.85 0.00 37.91 4.52
2245 2389 9.338622 CCTCCGTTTTTATTTACTCCTCATATT 57.661 33.333 0.00 0.00 0.00 1.28
2246 2390 7.937394 CCCTCCGTTTTTATTTACTCCTCATAT 59.063 37.037 0.00 0.00 0.00 1.78
2247 2391 7.277396 CCCTCCGTTTTTATTTACTCCTCATA 58.723 38.462 0.00 0.00 0.00 2.15
2248 2392 6.120220 CCCTCCGTTTTTATTTACTCCTCAT 58.880 40.000 0.00 0.00 0.00 2.90
2249 2393 5.493809 CCCTCCGTTTTTATTTACTCCTCA 58.506 41.667 0.00 0.00 0.00 3.86
2250 2394 4.880120 CCCCTCCGTTTTTATTTACTCCTC 59.120 45.833 0.00 0.00 0.00 3.71
2251 2395 4.324797 CCCCCTCCGTTTTTATTTACTCCT 60.325 45.833 0.00 0.00 0.00 3.69
2252 2396 3.949754 CCCCCTCCGTTTTTATTTACTCC 59.050 47.826 0.00 0.00 0.00 3.85
2253 2397 4.592942 ACCCCCTCCGTTTTTATTTACTC 58.407 43.478 0.00 0.00 0.00 2.59
2254 2398 4.662966 ACCCCCTCCGTTTTTATTTACT 57.337 40.909 0.00 0.00 0.00 2.24
2255 2399 7.093814 ACAAATACCCCCTCCGTTTTTATTTAC 60.094 37.037 0.00 0.00 0.00 2.01
2256 2400 6.952938 ACAAATACCCCCTCCGTTTTTATTTA 59.047 34.615 0.00 0.00 0.00 1.40
2257 2401 5.781306 ACAAATACCCCCTCCGTTTTTATTT 59.219 36.000 0.00 0.00 0.00 1.40
2258 2402 5.186215 CACAAATACCCCCTCCGTTTTTATT 59.814 40.000 0.00 0.00 0.00 1.40
2259 2403 4.707934 CACAAATACCCCCTCCGTTTTTAT 59.292 41.667 0.00 0.00 0.00 1.40
2260 2404 4.080687 CACAAATACCCCCTCCGTTTTTA 58.919 43.478 0.00 0.00 0.00 1.52
2261 2405 2.894765 CACAAATACCCCCTCCGTTTTT 59.105 45.455 0.00 0.00 0.00 1.94
2262 2406 2.108601 TCACAAATACCCCCTCCGTTTT 59.891 45.455 0.00 0.00 0.00 2.43
2263 2407 1.706305 TCACAAATACCCCCTCCGTTT 59.294 47.619 0.00 0.00 0.00 3.60
2264 2408 1.280998 CTCACAAATACCCCCTCCGTT 59.719 52.381 0.00 0.00 0.00 4.44
2265 2409 0.909623 CTCACAAATACCCCCTCCGT 59.090 55.000 0.00 0.00 0.00 4.69
2266 2410 0.909623 ACTCACAAATACCCCCTCCG 59.090 55.000 0.00 0.00 0.00 4.63
2267 2411 1.913419 TCACTCACAAATACCCCCTCC 59.087 52.381 0.00 0.00 0.00 4.30
2268 2412 2.304761 TGTCACTCACAAATACCCCCTC 59.695 50.000 0.00 0.00 29.30 4.30
2269 2413 2.344592 TGTCACTCACAAATACCCCCT 58.655 47.619 0.00 0.00 29.30 4.79
2270 2414 2.871096 TGTCACTCACAAATACCCCC 57.129 50.000 0.00 0.00 29.30 5.40
2271 2415 3.686016 ACATGTCACTCACAAATACCCC 58.314 45.455 0.00 0.00 38.97 4.95
2272 2416 5.240623 TCAAACATGTCACTCACAAATACCC 59.759 40.000 0.00 0.00 38.97 3.69
2273 2417 6.312399 TCAAACATGTCACTCACAAATACC 57.688 37.500 0.00 0.00 38.97 2.73
2274 2418 8.693504 CATTTCAAACATGTCACTCACAAATAC 58.306 33.333 0.00 0.00 38.97 1.89
2275 2419 8.628280 TCATTTCAAACATGTCACTCACAAATA 58.372 29.630 0.00 0.00 38.97 1.40
2276 2420 7.490840 TCATTTCAAACATGTCACTCACAAAT 58.509 30.769 0.00 0.00 38.97 2.32
2277 2421 6.861144 TCATTTCAAACATGTCACTCACAAA 58.139 32.000 0.00 0.00 38.97 2.83
2303 2452 9.273016 GGCTATGCATGTTTAAGAATTCTACTA 57.727 33.333 10.16 0.00 0.00 1.82
2304 2453 7.995488 AGGCTATGCATGTTTAAGAATTCTACT 59.005 33.333 10.16 0.00 0.00 2.57
2305 2454 8.159344 AGGCTATGCATGTTTAAGAATTCTAC 57.841 34.615 10.16 4.09 0.00 2.59
2306 2455 8.752005 AAGGCTATGCATGTTTAAGAATTCTA 57.248 30.769 10.16 0.00 0.00 2.10
2309 2458 8.624776 GTCTAAGGCTATGCATGTTTAAGAATT 58.375 33.333 10.16 0.00 0.00 2.17
2316 2465 4.080356 TGAGGTCTAAGGCTATGCATGTTT 60.080 41.667 10.16 0.95 0.00 2.83
2326 2475 1.819903 GAAGTCGTGAGGTCTAAGGCT 59.180 52.381 0.00 0.00 0.00 4.58
2367 2516 8.250143 TGCATACCATATTCTTACAGAAGAGA 57.750 34.615 0.00 0.00 42.66 3.10
2372 2521 9.407380 ACAAAATGCATACCATATTCTTACAGA 57.593 29.630 0.00 0.00 32.67 3.41
2373 2522 9.454585 CACAAAATGCATACCATATTCTTACAG 57.545 33.333 0.00 0.00 32.67 2.74
2374 2523 8.965819 ACACAAAATGCATACCATATTCTTACA 58.034 29.630 0.00 0.00 32.67 2.41
2377 2526 9.189156 AGTACACAAAATGCATACCATATTCTT 57.811 29.630 0.00 0.00 32.67 2.52
2378 2527 8.752005 AGTACACAAAATGCATACCATATTCT 57.248 30.769 0.00 0.00 32.67 2.40
2379 2528 8.840321 AGAGTACACAAAATGCATACCATATTC 58.160 33.333 0.00 0.00 32.67 1.75
2398 2547 9.793259 ATCACCTTTATTTTTCAAGAGAGTACA 57.207 29.630 0.00 0.00 0.00 2.90
2421 2570 5.809001 AGTGCTACTCTTCATTGGAAATCA 58.191 37.500 0.00 0.00 31.35 2.57
2422 2571 6.018343 GCTAGTGCTACTCTTCATTGGAAATC 60.018 42.308 0.00 0.00 36.03 2.17
2435 2584 6.900189 TGTATCTTAATCGCTAGTGCTACTC 58.100 40.000 0.00 0.00 36.97 2.59
2444 2593 6.929049 CCAAGGTTGATGTATCTTAATCGCTA 59.071 38.462 0.00 0.00 0.00 4.26
2495 2646 6.764308 AGCTACAACAAATGAAGCACATAT 57.236 33.333 0.00 0.00 38.38 1.78
2501 2652 7.363431 AGAAGTTTAGCTACAACAAATGAAGC 58.637 34.615 16.14 0.00 0.00 3.86
2553 2704 9.817809 CATATGTAGAAAAAGCTAGTAAGTGGA 57.182 33.333 0.00 0.00 0.00 4.02
2555 2706 9.046296 CCCATATGTAGAAAAAGCTAGTAAGTG 57.954 37.037 1.24 0.00 0.00 3.16
2556 2707 8.769359 ACCCATATGTAGAAAAAGCTAGTAAGT 58.231 33.333 1.24 0.00 0.00 2.24
2557 2708 9.046296 CACCCATATGTAGAAAAAGCTAGTAAG 57.954 37.037 1.24 0.00 0.00 2.34
2565 2716 6.136541 GGAAGCACCCATATGTAGAAAAAG 57.863 41.667 1.24 0.00 0.00 2.27
2580 2731 2.507407 TAATTGAGGTGGGAAGCACC 57.493 50.000 0.00 0.00 42.81 5.01
2582 2733 4.016444 GTCAATAATTGAGGTGGGAAGCA 58.984 43.478 0.00 0.00 41.01 3.91
2587 2738 5.195940 ACATCTGTCAATAATTGAGGTGGG 58.804 41.667 0.00 0.00 41.01 4.61
2625 2780 2.288334 TGCAAATGAAGCACACATGGAC 60.288 45.455 0.00 0.00 37.02 4.02
2632 2787 1.341852 AGCACATGCAAATGAAGCACA 59.658 42.857 6.64 0.00 45.95 4.57
2644 2799 9.013490 CAAAATAAGTAACTTATGAGCACATGC 57.987 33.333 6.91 0.00 36.85 4.06
2677 3135 2.509131 TGTGGCATGGTTCATGGATAGA 59.491 45.455 9.54 0.00 41.64 1.98
2683 3141 2.691011 TGATGATGTGGCATGGTTCATG 59.309 45.455 8.50 3.72 43.91 3.07
2694 3152 4.744631 CACATGCATGATTTGATGATGTGG 59.255 41.667 32.75 0.59 37.71 4.17
2698 3156 6.215495 TGAACACATGCATGATTTGATGAT 57.785 33.333 32.75 13.85 0.00 2.45
2699 3157 5.646577 TGAACACATGCATGATTTGATGA 57.353 34.783 32.75 7.37 0.00 2.92
2700 3158 6.902224 AATGAACACATGCATGATTTGATG 57.098 33.333 32.75 20.49 0.00 3.07
2701 3159 6.700081 GCTAATGAACACATGCATGATTTGAT 59.300 34.615 32.75 19.46 0.00 2.57
2702 3160 6.037726 GCTAATGAACACATGCATGATTTGA 58.962 36.000 32.75 18.17 0.00 2.69
2703 3161 5.808030 TGCTAATGAACACATGCATGATTTG 59.192 36.000 32.75 21.91 0.00 2.32
2706 3164 5.784578 ATGCTAATGAACACATGCATGAT 57.215 34.783 32.75 17.20 34.60 2.45
2707 3165 5.585820 AATGCTAATGAACACATGCATGA 57.414 34.783 32.75 10.72 35.42 3.07
2712 3191 6.469139 TGCAAAAATGCTAATGAACACATG 57.531 33.333 2.22 0.00 35.49 3.21
2724 3203 8.780846 TGAATTGATAGATTTGCAAAAATGCT 57.219 26.923 17.19 13.09 35.49 3.79
2725 3204 9.828852 TTTGAATTGATAGATTTGCAAAAATGC 57.171 25.926 17.19 9.27 0.00 3.56
2736 3215 7.616935 AGGTGTCATGGTTTGAATTGATAGATT 59.383 33.333 0.00 0.00 35.70 2.40
2737 3216 7.121382 AGGTGTCATGGTTTGAATTGATAGAT 58.879 34.615 0.00 0.00 35.70 1.98
2738 3217 6.484288 AGGTGTCATGGTTTGAATTGATAGA 58.516 36.000 0.00 0.00 35.70 1.98
2739 3218 6.375174 TGAGGTGTCATGGTTTGAATTGATAG 59.625 38.462 0.00 0.00 35.70 2.08
2741 3220 5.078949 TGAGGTGTCATGGTTTGAATTGAT 58.921 37.500 0.00 0.00 35.70 2.57
2743 3222 4.852134 TGAGGTGTCATGGTTTGAATTG 57.148 40.909 0.00 0.00 35.70 2.32
2764 3245 4.543590 AGGAAGACGTGATTGACTTGAT 57.456 40.909 0.00 0.00 0.00 2.57
2834 3329 9.859427 TCCTATTTTGCATTTCAGAAACAATAG 57.141 29.630 0.00 5.91 0.00 1.73
2836 3331 8.992073 GTTCCTATTTTGCATTTCAGAAACAAT 58.008 29.630 0.00 0.00 0.00 2.71
2845 3340 7.131498 TGCAATTGTTCCTATTTTGCATTTC 57.869 32.000 7.40 0.00 45.42 2.17
2858 3353 3.784746 GCGGCATGCAATTGTTCC 58.215 55.556 21.36 0.00 45.45 3.62
2867 3362 0.458197 TGTTTGCTTATGCGGCATGC 60.458 50.000 24.99 20.05 43.34 4.06
2868 3363 1.135315 AGTGTTTGCTTATGCGGCATG 60.135 47.619 24.99 10.66 43.34 4.06
2872 3367 5.914635 CCATTATAAGTGTTTGCTTATGCGG 59.085 40.000 8.17 3.43 40.62 5.69
2873 3368 6.494842 ACCATTATAAGTGTTTGCTTATGCG 58.505 36.000 8.17 0.00 40.62 4.73
2874 3369 8.402472 TGTACCATTATAAGTGTTTGCTTATGC 58.598 33.333 8.17 0.00 40.62 3.14
2878 3373 9.019656 TCATTGTACCATTATAAGTGTTTGCTT 57.980 29.630 0.00 0.00 0.00 3.91
2880 3375 8.673711 TCTCATTGTACCATTATAAGTGTTTGC 58.326 33.333 0.00 0.00 0.00 3.68
2895 3390 7.383102 AGAACACATGATTTCTCATTGTACC 57.617 36.000 0.00 0.00 40.20 3.34
2922 3872 9.137459 TCACAAATTCCTAAAAGGTGTTTGATA 57.863 29.630 21.35 12.16 40.13 2.15
2928 3878 7.595819 TTGATCACAAATTCCTAAAAGGTGT 57.404 32.000 0.00 0.00 33.11 4.16
2943 3893 9.418839 TCCAATATATTGACCATTTGATCACAA 57.581 29.630 24.17 0.00 40.14 3.33
2944 3894 8.993404 TCCAATATATTGACCATTTGATCACA 57.007 30.769 24.17 0.00 40.14 3.58
2954 3904 9.699410 AGAGTGAAATTTCCAATATATTGACCA 57.301 29.630 24.17 9.35 40.14 4.02
2956 3906 9.869844 CGAGAGTGAAATTTCCAATATATTGAC 57.130 33.333 24.17 12.70 40.14 3.18
2957 3907 9.613428 ACGAGAGTGAAATTTCCAATATATTGA 57.387 29.630 24.17 7.33 46.97 2.57
2969 3919 7.119262 CCAATAGTTGGTACGAGAGTGAAATTT 59.881 37.037 0.54 0.00 44.65 1.82
2970 3920 6.594159 CCAATAGTTGGTACGAGAGTGAAATT 59.406 38.462 0.54 0.00 44.65 1.82
2971 3921 6.106673 CCAATAGTTGGTACGAGAGTGAAAT 58.893 40.000 0.54 0.00 44.65 2.17
2972 3922 5.475719 CCAATAGTTGGTACGAGAGTGAAA 58.524 41.667 0.54 0.00 44.65 2.69
2973 3923 5.068234 CCAATAGTTGGTACGAGAGTGAA 57.932 43.478 0.54 0.00 44.65 3.18
2974 3924 4.713824 CCAATAGTTGGTACGAGAGTGA 57.286 45.455 0.54 0.00 44.65 3.41
2986 3936 9.683069 GCCAAATATAGAATGAACCAATAGTTG 57.317 33.333 0.00 0.00 39.40 3.16
2987 3937 8.860088 GGCCAAATATAGAATGAACCAATAGTT 58.140 33.333 0.00 0.00 43.07 2.24
2988 3938 7.451566 GGGCCAAATATAGAATGAACCAATAGT 59.548 37.037 4.39 0.00 0.00 2.12
2997 3947 6.672593 AGTTCAAGGGCCAAATATAGAATGA 58.327 36.000 6.18 0.00 0.00 2.57
3002 3952 4.792068 TGGAGTTCAAGGGCCAAATATAG 58.208 43.478 6.18 0.00 0.00 1.31
3038 3988 8.094548 GCCAGGTTTAAAATCTTTAAGGTCAAT 58.905 33.333 0.00 0.00 0.00 2.57
3041 3991 6.988522 TGCCAGGTTTAAAATCTTTAAGGTC 58.011 36.000 0.00 0.00 0.00 3.85
3047 3997 6.542005 CCAACTTTGCCAGGTTTAAAATCTTT 59.458 34.615 0.00 0.00 0.00 2.52
3050 4000 5.364778 ACCAACTTTGCCAGGTTTAAAATC 58.635 37.500 0.00 0.00 0.00 2.17
3051 4001 5.366482 ACCAACTTTGCCAGGTTTAAAAT 57.634 34.783 0.00 0.00 0.00 1.82
3055 4005 2.696187 GGAACCAACTTTGCCAGGTTTA 59.304 45.455 0.00 0.00 43.94 2.01
3057 4007 1.119684 GGAACCAACTTTGCCAGGTT 58.880 50.000 0.00 0.00 46.39 3.50
3061 4011 7.179269 ACTAATATTAGGAACCAACTTTGCCA 58.821 34.615 23.24 0.00 35.08 4.92
3062 4012 7.466860 CGACTAATATTAGGAACCAACTTTGCC 60.467 40.741 23.24 0.00 35.08 4.52
3093 4043 4.142403 CGTGCAAGATTACCACCATCATTT 60.142 41.667 0.00 0.00 0.00 2.32
3107 4065 0.165944 GTGCTAAACGCGTGCAAGAT 59.834 50.000 22.19 0.00 43.27 2.40
3111 4069 0.309302 AATTGTGCTAAACGCGTGCA 59.691 45.000 14.98 16.55 43.27 4.57
3124 4082 3.190327 TCGCCACCAACATTCTAATTGTG 59.810 43.478 0.00 0.00 0.00 3.33
3137 4095 8.684386 TTCAATATAAAATATCTCGCCACCAA 57.316 30.769 0.00 0.00 0.00 3.67
3287 4995 3.181510 GGTCAACCACGCATTGAATAGAC 60.182 47.826 0.00 0.00 37.80 2.59
3510 5218 5.823045 CACCTGATAAATAAGAGGGGACAAC 59.177 44.000 0.00 0.00 29.56 3.32
3518 5226 6.816640 TGTCGGTTTCACCTGATAAATAAGAG 59.183 38.462 0.00 0.00 35.66 2.85
3521 5229 6.370442 CAGTGTCGGTTTCACCTGATAAATAA 59.630 38.462 0.00 0.00 35.66 1.40
3523 5232 4.695455 CAGTGTCGGTTTCACCTGATAAAT 59.305 41.667 0.00 0.00 35.66 1.40
3546 5255 1.348594 GCACGCGTATCTCTTTGCC 59.651 57.895 13.44 0.00 0.00 4.52
3578 5287 0.847373 TGGTGGGCCTTAAGTTGACA 59.153 50.000 4.53 0.00 35.27 3.58
3593 5302 2.066262 CTTACGTGTAGGCTTGTGGTG 58.934 52.381 0.00 0.00 0.00 4.17
3638 5347 9.622004 GTTGATCATGGATAATAATGCTCAAAG 57.378 33.333 0.00 0.00 39.36 2.77
3648 5357 9.336171 TGAACGAAATGTTGATCATGGATAATA 57.664 29.630 0.00 0.00 42.09 0.98
3659 5368 7.918033 TGTGTAATTGTTGAACGAAATGTTGAT 59.082 29.630 0.00 0.00 42.09 2.57
3701 5410 4.034510 CCGAATTGGTATTTGAGAGCACTC 59.965 45.833 3.95 3.95 42.88 3.51
3772 5481 8.812329 CACCAAATGTTCGTCAGAAAAATAAAA 58.188 29.630 0.00 0.00 38.23 1.52
3843 5552 7.121168 ACAATTCATGTGTATTCGATCTTTGGT 59.879 33.333 0.00 0.00 41.93 3.67
3903 5613 6.927294 ATTCTTCAGCTTTATTACGGGAAG 57.073 37.500 0.00 0.00 33.41 3.46
3906 5616 8.499162 CATTCTATTCTTCAGCTTTATTACGGG 58.501 37.037 0.00 0.00 0.00 5.28
3945 5656 2.620112 AACACATGCCTGCTCACGC 61.620 57.895 0.00 0.00 0.00 5.34
4235 5946 3.009723 CTCTTGAGAATTAGCCGCCAAA 58.990 45.455 0.00 0.00 0.00 3.28
4237 5948 1.555075 ACTCTTGAGAATTAGCCGCCA 59.445 47.619 4.49 0.00 0.00 5.69
4252 5963 2.300437 GAGGCACTGGTCTTGTACTCTT 59.700 50.000 0.00 0.00 41.55 2.85
4298 6009 1.680735 TCAAAATTTGAGTGCAGCGGT 59.319 42.857 4.03 0.00 34.08 5.68
4311 6029 5.308976 AGAACCCAAAATGGCTCAAAATT 57.691 34.783 0.00 0.00 35.79 1.82
4328 6046 2.501261 AGGCCGTTAGAAACAAGAACC 58.499 47.619 0.00 0.00 0.00 3.62
4347 6065 1.291184 TTCGCGTCAGATGTGGCAAG 61.291 55.000 5.77 0.00 0.00 4.01
4432 6150 4.636435 ACCTGTTCAACCGGGCCG 62.636 66.667 21.46 21.46 0.00 6.13
4556 6274 4.625311 CGCACACAAGACACTAACATATCA 59.375 41.667 0.00 0.00 0.00 2.15
4559 6277 2.734606 GCGCACACAAGACACTAACATA 59.265 45.455 0.30 0.00 0.00 2.29
4569 6287 2.046009 TAACCCTGGCGCACACAAGA 62.046 55.000 10.83 0.00 0.00 3.02
4571 6289 0.752009 TTTAACCCTGGCGCACACAA 60.752 50.000 10.83 0.00 0.00 3.33
4579 6297 4.885907 GGGAGTACTTTATTTAACCCTGGC 59.114 45.833 0.00 0.00 33.99 4.85
4595 6313 1.640917 TTGTGGGACTGAGGGAGTAC 58.359 55.000 0.00 0.00 33.83 2.73
4596 6314 2.642171 ATTGTGGGACTGAGGGAGTA 57.358 50.000 0.00 0.00 33.83 2.59
4597 6315 2.642171 TATTGTGGGACTGAGGGAGT 57.358 50.000 0.00 0.00 37.76 3.85
4598 6316 4.901849 TCTTATATTGTGGGACTGAGGGAG 59.098 45.833 0.00 0.00 0.00 4.30
4599 6317 4.654262 GTCTTATATTGTGGGACTGAGGGA 59.346 45.833 0.00 0.00 0.00 4.20
4600 6318 4.501571 CGTCTTATATTGTGGGACTGAGGG 60.502 50.000 0.00 0.00 0.00 4.30
4601 6319 4.099573 ACGTCTTATATTGTGGGACTGAGG 59.900 45.833 0.00 0.00 0.00 3.86
4602 6320 5.263968 ACGTCTTATATTGTGGGACTGAG 57.736 43.478 0.00 0.00 0.00 3.35
4603 6321 5.670792 AACGTCTTATATTGTGGGACTGA 57.329 39.130 0.00 0.00 0.00 3.41
4604 6322 6.737254 AAAACGTCTTATATTGTGGGACTG 57.263 37.500 0.00 0.00 0.00 3.51
4605 6323 6.349033 GCAAAAACGTCTTATATTGTGGGACT 60.349 38.462 0.00 0.00 0.00 3.85
4606 6324 5.798434 GCAAAAACGTCTTATATTGTGGGAC 59.202 40.000 0.00 0.00 0.00 4.46
4607 6325 5.473846 TGCAAAAACGTCTTATATTGTGGGA 59.526 36.000 0.00 0.00 0.00 4.37
4608 6326 5.704888 TGCAAAAACGTCTTATATTGTGGG 58.295 37.500 0.00 0.00 0.00 4.61
4609 6327 6.183359 GCTTGCAAAAACGTCTTATATTGTGG 60.183 38.462 0.00 0.00 0.00 4.17
4610 6328 6.582295 AGCTTGCAAAAACGTCTTATATTGTG 59.418 34.615 0.00 0.00 0.00 3.33
4611 6329 6.677913 AGCTTGCAAAAACGTCTTATATTGT 58.322 32.000 0.00 0.00 0.00 2.71
4612 6330 8.841444 ATAGCTTGCAAAAACGTCTTATATTG 57.159 30.769 0.00 0.00 0.00 1.90
4618 6336 8.893727 AGATAATATAGCTTGCAAAAACGTCTT 58.106 29.630 0.00 0.00 0.00 3.01
4619 6337 8.438676 AGATAATATAGCTTGCAAAAACGTCT 57.561 30.769 0.00 0.00 0.00 4.18
4620 6338 8.947940 CAAGATAATATAGCTTGCAAAAACGTC 58.052 33.333 0.00 0.00 43.99 4.34
4621 6339 8.841444 CAAGATAATATAGCTTGCAAAAACGT 57.159 30.769 0.00 0.00 43.99 3.99
4648 6366 7.555195 CCCTACTTCCCATAATAAGACGTTTTT 59.445 37.037 0.00 0.00 0.00 1.94
4649 6367 7.052248 CCCTACTTCCCATAATAAGACGTTTT 58.948 38.462 0.00 0.00 0.00 2.43
4650 6368 6.384886 TCCCTACTTCCCATAATAAGACGTTT 59.615 38.462 0.00 0.00 0.00 3.60
4651 6369 5.901276 TCCCTACTTCCCATAATAAGACGTT 59.099 40.000 0.00 0.00 0.00 3.99
4652 6370 5.461327 TCCCTACTTCCCATAATAAGACGT 58.539 41.667 0.00 0.00 0.00 4.34
4653 6371 5.539193 ACTCCCTACTTCCCATAATAAGACG 59.461 44.000 0.00 0.00 0.00 4.18
4654 6372 6.997942 ACTCCCTACTTCCCATAATAAGAC 57.002 41.667 0.00 0.00 0.00 3.01
4655 6373 7.834046 ACTACTCCCTACTTCCCATAATAAGA 58.166 38.462 0.00 0.00 0.00 2.10
4656 6374 8.493787 AACTACTCCCTACTTCCCATAATAAG 57.506 38.462 0.00 0.00 0.00 1.73
4657 6375 9.956558 TTAACTACTCCCTACTTCCCATAATAA 57.043 33.333 0.00 0.00 0.00 1.40
4658 6376 9.372189 GTTAACTACTCCCTACTTCCCATAATA 57.628 37.037 0.00 0.00 0.00 0.98
4659 6377 7.847848 TGTTAACTACTCCCTACTTCCCATAAT 59.152 37.037 7.22 0.00 0.00 1.28
4660 6378 7.191210 TGTTAACTACTCCCTACTTCCCATAA 58.809 38.462 7.22 0.00 0.00 1.90
4661 6379 6.744822 TGTTAACTACTCCCTACTTCCCATA 58.255 40.000 7.22 0.00 0.00 2.74
4662 6380 5.596763 TGTTAACTACTCCCTACTTCCCAT 58.403 41.667 7.22 0.00 0.00 4.00
4663 6381 5.014534 TGTTAACTACTCCCTACTTCCCA 57.985 43.478 7.22 0.00 0.00 4.37
4664 6382 5.424573 ACATGTTAACTACTCCCTACTTCCC 59.575 44.000 7.22 0.00 0.00 3.97
4665 6383 6.154021 TGACATGTTAACTACTCCCTACTTCC 59.846 42.308 7.22 0.00 0.00 3.46
4666 6384 7.093858 ACTGACATGTTAACTACTCCCTACTTC 60.094 40.741 7.22 0.00 0.00 3.01
4667 6385 6.724905 ACTGACATGTTAACTACTCCCTACTT 59.275 38.462 7.22 0.00 0.00 2.24
4668 6386 6.153000 CACTGACATGTTAACTACTCCCTACT 59.847 42.308 7.22 0.00 0.00 2.57
4669 6387 6.331061 CACTGACATGTTAACTACTCCCTAC 58.669 44.000 7.22 0.00 0.00 3.18
4670 6388 5.105473 GCACTGACATGTTAACTACTCCCTA 60.105 44.000 7.22 0.00 0.00 3.53
4671 6389 4.322801 GCACTGACATGTTAACTACTCCCT 60.323 45.833 7.22 0.00 0.00 4.20
4672 6390 3.933332 GCACTGACATGTTAACTACTCCC 59.067 47.826 7.22 0.00 0.00 4.30
4673 6391 3.933332 GGCACTGACATGTTAACTACTCC 59.067 47.826 7.22 0.00 0.00 3.85
4674 6392 3.933332 GGGCACTGACATGTTAACTACTC 59.067 47.826 7.22 0.00 0.00 2.59
4675 6393 3.583086 AGGGCACTGACATGTTAACTACT 59.417 43.478 7.22 0.00 0.00 2.57
4676 6394 3.939066 AGGGCACTGACATGTTAACTAC 58.061 45.455 7.22 0.00 0.00 2.73
4728 6447 5.151297 TGTGACAGTGATGCTCATCTAAA 57.849 39.130 10.76 0.00 38.60 1.85
4742 6461 8.500753 TGTTTTAGTAATCAACTTGTGACAGT 57.499 30.769 0.00 0.00 39.72 3.55
4908 6630 2.783510 AGTATGGACCCCAATACCCTTG 59.216 50.000 0.00 0.00 36.95 3.61
4909 6631 3.160575 AGTATGGACCCCAATACCCTT 57.839 47.619 0.00 0.00 36.95 3.95
4969 6691 1.283487 GGCCAACCGTGTAAAACCG 59.717 57.895 0.00 0.00 0.00 4.44
4996 6718 5.253096 ACTTCTATACCCAGGGTTGTTCAAT 59.747 40.000 19.18 5.39 37.09 2.57
5019 6741 9.676861 ACACTTATAAATACCTGGGTAAAGAAC 57.323 33.333 12.40 0.00 33.99 3.01
5024 6746 6.824704 GCACACACTTATAAATACCTGGGTAA 59.175 38.462 3.45 0.00 33.99 2.85
5117 6839 9.336171 ACACAAGCAAACCAAACAATTAATTAT 57.664 25.926 0.00 0.00 0.00 1.28
5326 7048 5.745294 GCGAAATCATGAATATGTTGCACTT 59.255 36.000 0.00 0.00 35.73 3.16
5357 7079 5.819991 AGTCCATCAGTAACATTGAATGGT 58.180 37.500 10.27 5.41 31.22 3.55
5367 7089 6.980416 AAGGGAGTATAGTCCATCAGTAAC 57.020 41.667 24.92 7.79 38.52 2.50
5400 7122 8.690203 TGCAAGCATAATTATACACCTTACAT 57.310 30.769 0.00 0.00 0.00 2.29
5410 7132 6.018262 GGTCGTTGACTGCAAGCATAATTATA 60.018 38.462 0.00 0.00 37.60 0.98
5444 7187 6.494893 TGCTCATTCCATGTACTTTTACAC 57.505 37.500 0.00 0.00 41.12 2.90
5566 7312 3.876914 ACTTTTCAGTCTTGAATGCACGA 59.123 39.130 0.00 0.00 42.60 4.35
5567 7313 4.214437 GACTTTTCAGTCTTGAATGCACG 58.786 43.478 0.00 0.00 45.54 5.34
5582 7328 6.833342 AATGCAAGACATGTTTGACTTTTC 57.167 33.333 18.78 6.20 39.60 2.29
5583 7329 6.258507 GGAAATGCAAGACATGTTTGACTTTT 59.741 34.615 18.78 17.39 39.60 2.27
5584 7330 5.754890 GGAAATGCAAGACATGTTTGACTTT 59.245 36.000 18.78 15.99 39.60 2.66
5587 7333 3.670055 CGGAAATGCAAGACATGTTTGAC 59.330 43.478 18.78 12.66 39.60 3.18
5588 7334 3.567585 TCGGAAATGCAAGACATGTTTGA 59.432 39.130 18.78 8.85 39.60 2.69
5589 7335 3.670055 GTCGGAAATGCAAGACATGTTTG 59.330 43.478 0.00 7.99 39.60 2.93
5590 7336 3.609175 CGTCGGAAATGCAAGACATGTTT 60.609 43.478 0.00 0.00 39.60 2.83
5591 7337 2.095768 CGTCGGAAATGCAAGACATGTT 60.096 45.455 0.00 0.00 39.60 2.71
5609 7355 5.839621 TGCTATAAACATACTCCCTTCGTC 58.160 41.667 0.00 0.00 0.00 4.20
5627 7373 7.606839 GGTTGAGTTTCTAGGTTTAGTTGCTAT 59.393 37.037 0.00 0.00 0.00 2.97
5658 7404 3.444703 GAGCCATACTCACTCGATGTT 57.555 47.619 0.00 0.00 45.49 2.71
5774 7521 4.210328 GGGTGTTTATTTTCTGTTTTGCGG 59.790 41.667 0.00 0.00 0.00 5.69
5779 7526 4.657436 TGCGGGTGTTTATTTTCTGTTT 57.343 36.364 0.00 0.00 0.00 2.83
5786 7533 7.633193 TGAGTAATATTGCGGGTGTTTATTT 57.367 32.000 0.00 0.00 0.00 1.40
5788 7535 7.224297 AGATGAGTAATATTGCGGGTGTTTAT 58.776 34.615 0.00 0.00 0.00 1.40
5798 7545 9.928236 GACTTTGAAGAAGATGAGTAATATTGC 57.072 33.333 0.00 0.00 0.00 3.56
5849 7596 8.467598 TCACTTAAAGACGCTATTAATGAGTCT 58.532 33.333 14.07 14.07 44.21 3.24
5910 7657 9.466497 TTCTATTCCACATAATGCTTCTTCTTT 57.534 29.630 0.00 0.00 0.00 2.52
5913 7660 8.443953 ACTTCTATTCCACATAATGCTTCTTC 57.556 34.615 0.00 0.00 0.00 2.87
5926 7674 3.412386 ACTGTGGCAACTTCTATTCCAC 58.588 45.455 2.99 2.99 45.43 4.02
6029 7777 8.439286 TGTGTGCATTTGTTTTAGTTTCTTTTC 58.561 29.630 0.00 0.00 0.00 2.29
6046 7796 6.095440 GGATGTCTTACCTAATTGTGTGCATT 59.905 38.462 0.00 0.00 0.00 3.56
6047 7797 5.590259 GGATGTCTTACCTAATTGTGTGCAT 59.410 40.000 0.00 0.00 0.00 3.96
6048 7798 4.941263 GGATGTCTTACCTAATTGTGTGCA 59.059 41.667 0.00 0.00 0.00 4.57
6049 7799 4.941263 TGGATGTCTTACCTAATTGTGTGC 59.059 41.667 0.00 0.00 0.00 4.57
6050 7800 7.630242 ATTGGATGTCTTACCTAATTGTGTG 57.370 36.000 0.00 0.00 0.00 3.82
6051 7801 9.342308 CATATTGGATGTCTTACCTAATTGTGT 57.658 33.333 0.00 0.00 0.00 3.72
6097 7848 8.780249 GTCTTTTGGCTTATAGTAACACTGAAA 58.220 33.333 0.00 0.00 0.00 2.69
6111 7862 8.579850 ACAGATTGATTATGTCTTTTGGCTTA 57.420 30.769 0.00 0.00 0.00 3.09
6112 7863 7.472334 ACAGATTGATTATGTCTTTTGGCTT 57.528 32.000 0.00 0.00 0.00 4.35
6113 7864 7.472334 AACAGATTGATTATGTCTTTTGGCT 57.528 32.000 0.00 0.00 0.00 4.75
6131 7882 6.600882 AAGCATTTTCTGATGGAAACAGAT 57.399 33.333 0.00 0.00 45.54 2.90
6215 7966 4.078639 AGTTGAAGGGAAAGTGAGTCAG 57.921 45.455 0.00 0.00 0.00 3.51
6251 8002 2.110006 GATGAGGAAGAGGGCGGC 59.890 66.667 0.00 0.00 0.00 6.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.