Multiple sequence alignment - TraesCS3B01G334500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G334500 chr3B 100.000 3905 0 0 1 3905 540661651 540657747 0.000000e+00 7212.0
1 TraesCS3B01G334500 chr3B 100.000 579 0 0 4255 4833 540657397 540656819 0.000000e+00 1070.0
2 TraesCS3B01G334500 chr3B 92.817 529 19 6 45 554 540680552 540680024 0.000000e+00 749.0
3 TraesCS3B01G334500 chr3B 84.701 451 66 3 3197 3646 540482533 540482085 9.540000e-122 448.0
4 TraesCS3B01G334500 chr3B 91.720 157 13 0 1056 1212 540484021 540483865 8.140000e-53 219.0
5 TraesCS3B01G334500 chr3A 91.993 1686 81 19 2256 3899 535325280 535326953 0.000000e+00 2316.0
6 TraesCS3B01G334500 chr3A 91.881 776 32 14 776 1531 535323513 535324277 0.000000e+00 1055.0
7 TraesCS3B01G334500 chr3A 84.486 477 67 6 3161 3636 535719209 535719679 9.470000e-127 464.0
8 TraesCS3B01G334500 chr3A 91.928 223 15 2 4258 4477 535327084 535327306 4.700000e-80 309.0
9 TraesCS3B01G334500 chr3A 82.250 400 29 16 386 758 535323062 535323446 1.690000e-79 307.0
10 TraesCS3B01G334500 chr3A 96.364 55 1 1 1536 1590 535325156 535325209 6.660000e-14 89.8
11 TraesCS3B01G334500 chr3D 90.505 1485 72 26 2470 3905 414767859 414766395 0.000000e+00 1897.0
12 TraesCS3B01G334500 chr3D 90.307 1238 53 24 773 1989 414769409 414768218 0.000000e+00 1559.0
13 TraesCS3B01G334500 chr3D 84.760 479 63 9 3161 3636 414640312 414639841 5.660000e-129 472.0
14 TraesCS3B01G334500 chr3D 93.722 223 14 0 4255 4477 414766271 414766049 7.750000e-88 335.0
15 TraesCS3B01G334500 chr3D 88.341 223 22 2 2040 2259 414768224 414768003 1.030000e-66 265.0
16 TraesCS3B01G334500 chr3D 80.886 361 37 18 386 742 414769846 414769514 6.210000e-64 255.0
17 TraesCS3B01G334500 chr3D 79.070 387 64 5 5 391 414770281 414769912 2.890000e-62 250.0
18 TraesCS3B01G334500 chr3D 92.308 156 12 0 1057 1212 414641866 414641711 6.300000e-54 222.0
19 TraesCS3B01G334500 chr7D 79.570 93 16 3 4556 4646 160849205 160849114 4.040000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G334500 chr3B 540656819 540661651 4832 True 4141.000000 7212 100.0000 1 4833 2 chr3B.!!$R3 4832
1 TraesCS3B01G334500 chr3B 540680024 540680552 528 True 749.000000 749 92.8170 45 554 1 chr3B.!!$R1 509
2 TraesCS3B01G334500 chr3B 540482085 540484021 1936 True 333.500000 448 88.2105 1056 3646 2 chr3B.!!$R2 2590
3 TraesCS3B01G334500 chr3A 535323062 535327306 4244 False 815.360000 2316 90.8832 386 4477 5 chr3A.!!$F2 4091
4 TraesCS3B01G334500 chr3D 414766049 414770281 4232 True 760.166667 1897 87.1385 5 4477 6 chr3D.!!$R2 4472
5 TraesCS3B01G334500 chr3D 414639841 414641866 2025 True 347.000000 472 88.5340 1057 3636 2 chr3D.!!$R1 2579

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
140 141 0.760945 CCTAAGTCGGCCTGGATCCT 60.761 60.0 14.23 0.0 0.00 3.24 F
1266 1470 0.677288 ATTTCCCATCCGCGTCGATA 59.323 50.0 4.92 0.0 0.00 2.92 F
2371 3561 0.035056 GCCTGCATTCAGTACCACCT 60.035 55.0 0.00 0.0 38.66 4.00 F
3321 4920 0.252696 TGGAGGCCCATCAGTACACT 60.253 55.0 0.00 0.0 37.58 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1417 1631 0.317436 CGACAGCTACATCTCTCCGC 60.317 60.0 0.00 0.0 0.00 5.54 R
2553 3756 0.510359 GCTGCAGAGAACAACACGAG 59.490 55.0 20.43 0.0 0.00 4.18 R
3653 5252 0.454789 TATTTCGCGACGAACGAGCA 60.455 50.0 9.15 0.0 45.64 4.26 R
4744 6345 0.039764 AAGGGAGGGTTTTGCCTAGC 59.960 55.0 0.00 0.0 38.02 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.555966 GAAAGAGGGAGAGAGAGAGAGG 58.444 54.545 0.00 0.00 0.00 3.69
23 24 1.010793 AGAGGGAGAGAGAGAGAGGGA 59.989 57.143 0.00 0.00 0.00 4.20
29 30 2.370189 GAGAGAGAGAGAGGGAGAGAGG 59.630 59.091 0.00 0.00 0.00 3.69
41 42 2.408565 GGAGAGAGGGAGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
140 141 0.760945 CCTAAGTCGGCCTGGATCCT 60.761 60.000 14.23 0.00 0.00 3.24
214 215 3.665745 TTGCTCAGGCTGAATTTTTCC 57.334 42.857 19.29 2.03 39.59 3.13
281 282 2.965831 ACGGGATTTGCTAGAGATGCTA 59.034 45.455 0.00 0.00 0.00 3.49
380 381 3.494626 TGAAAGAAGATGTTGCTGTCGAC 59.505 43.478 9.11 9.11 0.00 4.20
400 471 1.206132 CTATGGGGTGTGCGTGTAGAA 59.794 52.381 0.00 0.00 0.00 2.10
464 539 8.539770 TCTTCAATTGTGCTGTGTTTTAAAAA 57.460 26.923 5.13 0.00 0.00 1.94
483 558 4.838959 AAAAAGAACGCGCATCGG 57.161 50.000 5.73 0.00 43.86 4.18
484 559 2.240230 AAAAAGAACGCGCATCGGA 58.760 47.368 5.73 0.00 43.86 4.55
516 610 3.623510 CGTCCCATAGAGAAAAAGGAAGC 59.376 47.826 0.00 0.00 0.00 3.86
574 668 2.759973 CCCCTCAGCAGCGGAGTA 60.760 66.667 19.71 0.00 0.00 2.59
575 669 2.359169 CCCCTCAGCAGCGGAGTAA 61.359 63.158 19.71 0.00 0.00 2.24
576 670 1.690219 CCCCTCAGCAGCGGAGTAAT 61.690 60.000 19.71 0.00 0.00 1.89
580 674 2.036475 CCTCAGCAGCGGAGTAATGTAT 59.964 50.000 19.71 0.00 0.00 2.29
585 679 2.288825 GCAGCGGAGTAATGTATGGCTA 60.289 50.000 0.00 0.00 0.00 3.93
588 682 3.064931 GCGGAGTAATGTATGGCTAACC 58.935 50.000 0.00 0.00 0.00 2.85
631 726 9.941664 AGCTAAAACTTAATCAATCAATCATCG 57.058 29.630 0.00 0.00 0.00 3.84
636 731 8.826546 AACTTAATCAATCAATCATCGAAACG 57.173 30.769 0.00 0.00 0.00 3.60
645 740 2.961522 TCATCGAAACGAAAAGTGCC 57.038 45.000 0.00 0.00 39.99 5.01
679 774 4.630785 CGGATCTCGATGCGCCGT 62.631 66.667 4.18 0.00 44.96 5.68
718 813 2.430382 ATCACTTGCGTCGGTCGGTT 62.430 55.000 0.00 0.00 40.26 4.44
719 814 2.660552 ACTTGCGTCGGTCGGTTG 60.661 61.111 0.00 0.00 40.26 3.77
720 815 3.411351 CTTGCGTCGGTCGGTTGG 61.411 66.667 0.00 0.00 40.26 3.77
721 816 4.224274 TTGCGTCGGTCGGTTGGT 62.224 61.111 0.00 0.00 40.26 3.67
745 843 4.499696 CGCTGAAAAGTGAAAACCAATCCT 60.500 41.667 0.00 0.00 0.00 3.24
863 1054 2.128507 CACCTACCCGCTCCCTCTC 61.129 68.421 0.00 0.00 0.00 3.20
864 1055 2.522193 CCTACCCGCTCCCTCTCC 60.522 72.222 0.00 0.00 0.00 3.71
865 1056 2.522193 CTACCCGCTCCCTCTCCC 60.522 72.222 0.00 0.00 0.00 4.30
866 1057 3.028098 TACCCGCTCCCTCTCCCT 61.028 66.667 0.00 0.00 0.00 4.20
867 1058 2.987355 CTACCCGCTCCCTCTCCCTC 62.987 70.000 0.00 0.00 0.00 4.30
868 1059 4.150454 CCCGCTCCCTCTCCCTCT 62.150 72.222 0.00 0.00 0.00 3.69
959 1150 3.827898 GAGACCCCGAGCGTGGAG 61.828 72.222 0.00 0.00 0.00 3.86
960 1151 4.361971 AGACCCCGAGCGTGGAGA 62.362 66.667 0.00 0.00 0.00 3.71
961 1152 4.131088 GACCCCGAGCGTGGAGAC 62.131 72.222 0.00 0.00 0.00 3.36
962 1153 4.680537 ACCCCGAGCGTGGAGACT 62.681 66.667 0.00 0.00 0.00 3.24
963 1154 4.135153 CCCCGAGCGTGGAGACTG 62.135 72.222 0.00 0.00 0.00 3.51
965 1156 4.056125 CCGAGCGTGGAGACTGCA 62.056 66.667 0.00 0.00 0.00 4.41
1219 1419 1.740296 GGAACGTACGTGCCATGCT 60.740 57.895 35.79 13.36 43.41 3.79
1259 1459 0.746659 CCCTTGAATTTCCCATCCGC 59.253 55.000 0.00 0.00 0.00 5.54
1266 1470 0.677288 ATTTCCCATCCGCGTCGATA 59.323 50.000 4.92 0.00 0.00 2.92
1376 1585 3.379445 GTCAACTCCCGGCGAGGA 61.379 66.667 19.96 12.88 43.57 3.71
1377 1586 3.379445 TCAACTCCCGGCGAGGAC 61.379 66.667 19.96 0.00 43.57 3.85
1404 1614 1.600957 CCATGCCTCTATCGCTGTTTG 59.399 52.381 0.00 0.00 0.00 2.93
1453 1669 4.643953 CTGTCGCTCTCGTATAATCTAGC 58.356 47.826 0.00 0.00 36.96 3.42
1472 1688 4.944962 AGCATCACGATTCGAATTTCAA 57.055 36.364 12.81 0.00 0.00 2.69
1513 1732 4.277672 TCGAGACTGGGGTTCGATATTTAG 59.722 45.833 0.00 0.00 38.32 1.85
1570 2667 2.329690 CTCGTCTCAGATCGGCGG 59.670 66.667 7.21 0.00 0.00 6.13
1607 2704 2.348660 CCGCGTGGTGACCTTAATTAA 58.651 47.619 6.91 0.00 0.00 1.40
1609 2706 3.242608 CCGCGTGGTGACCTTAATTAATG 60.243 47.826 6.91 0.00 0.00 1.90
1614 2711 5.193679 GTGGTGACCTTAATTAATGCCTCT 58.806 41.667 2.11 0.00 0.00 3.69
1630 2727 1.211457 CCTCTGCTGCTACCCAATCTT 59.789 52.381 0.00 0.00 0.00 2.40
1639 2736 5.392057 GCTGCTACCCAATCTTTTTAGTCAC 60.392 44.000 0.00 0.00 0.00 3.67
1677 2784 5.643777 ACTTGCAGTGTGGATAAAGTCATAC 59.356 40.000 0.00 0.00 0.00 2.39
1693 2800 2.916269 TCATACTTTCCCCACATCCACA 59.084 45.455 0.00 0.00 0.00 4.17
1734 2841 5.279506 CCACCTACTTCACTGTATCAAGTGT 60.280 44.000 4.41 0.00 46.33 3.55
1739 2846 7.542477 CCTACTTCACTGTATCAAGTGTGTTAG 59.458 40.741 4.41 4.03 46.33 2.34
1751 2858 6.567050 TCAAGTGTGTTAGTTTACGTCTTCT 58.433 36.000 0.00 0.00 0.00 2.85
1772 2879 8.587608 TCTTCTCCTAAACCTCGTAAATACAAA 58.412 33.333 0.00 0.00 0.00 2.83
1789 2896 7.931578 AATACAAAGATTTGGATTCGGTGTA 57.068 32.000 9.50 0.00 46.06 2.90
1791 2898 4.700213 ACAAAGATTTGGATTCGGTGTAGG 59.300 41.667 9.91 0.00 42.34 3.18
1803 2910 6.766467 GGATTCGGTGTAGGAATTTGTTCTAT 59.234 38.462 0.00 0.00 34.41 1.98
1831 2938 2.450609 CTAACACGGTGGTAGTGCTT 57.549 50.000 22.21 4.36 42.94 3.91
1856 2963 4.438472 GCTAGTTCGTAGGTACCTTGACAG 60.438 50.000 22.11 14.85 0.00 3.51
1880 2987 3.604875 AATCTTGCAGCAAATCCCAAG 57.395 42.857 9.65 0.00 36.81 3.61
1909 3016 4.872691 GCAGTATACAGTGTGAGCAAATCT 59.127 41.667 5.88 0.00 0.00 2.40
1956 3063 2.083715 CCACCACCCACCCTGTTAT 58.916 57.895 0.00 0.00 0.00 1.89
1958 3065 0.404040 CACCACCCACCCTGTTATGT 59.596 55.000 0.00 0.00 0.00 2.29
1963 3070 3.498841 CCACCCACCCTGTTATGTTACAA 60.499 47.826 0.00 0.00 0.00 2.41
1964 3071 4.145807 CACCCACCCTGTTATGTTACAAA 58.854 43.478 0.00 0.00 0.00 2.83
1984 3091 6.329496 ACAAATTGTGTCACTTTGTACCAAG 58.671 36.000 17.28 5.19 42.46 3.61
1989 3096 5.297547 TGTGTCACTTTGTACCAAGAGATC 58.702 41.667 13.30 8.73 0.00 2.75
1991 3098 5.635700 GTGTCACTTTGTACCAAGAGATCTC 59.364 44.000 15.29 15.29 0.00 2.75
1992 3099 5.172205 GTCACTTTGTACCAAGAGATCTCC 58.828 45.833 19.30 3.35 0.00 3.71
1993 3100 4.223032 TCACTTTGTACCAAGAGATCTCCC 59.777 45.833 19.30 0.00 0.00 4.30
1994 3101 3.519913 ACTTTGTACCAAGAGATCTCCCC 59.480 47.826 19.30 0.00 0.00 4.81
2013 3120 3.126323 CCCCCTAAACCTGGTAGTACT 57.874 52.381 0.00 0.00 0.00 2.73
2014 3121 4.270317 CCCCCTAAACCTGGTAGTACTA 57.730 50.000 0.00 0.00 0.00 1.82
2016 3123 5.032170 CCCCCTAAACCTGGTAGTACTAAA 58.968 45.833 3.61 0.00 0.00 1.85
2019 3126 7.202038 CCCCCTAAACCTGGTAGTACTAAATAC 60.202 44.444 3.61 0.00 0.00 1.89
2020 3127 7.345392 CCCCTAAACCTGGTAGTACTAAATACA 59.655 40.741 3.61 1.37 36.09 2.29
2021 3128 8.761689 CCCTAAACCTGGTAGTACTAAATACAA 58.238 37.037 3.61 0.00 36.09 2.41
2025 3132 7.744678 ACCTGGTAGTACTAAATACAATGGT 57.255 36.000 3.61 4.25 36.09 3.55
2028 3135 8.889717 CCTGGTAGTACTAAATACAATGGTTTG 58.110 37.037 3.61 0.00 36.09 2.93
2029 3136 8.795842 TGGTAGTACTAAATACAATGGTTTGG 57.204 34.615 3.61 0.00 37.15 3.28
2031 3138 9.623000 GGTAGTACTAAATACAATGGTTTGGAT 57.377 33.333 3.61 0.00 38.06 3.41
2088 3195 7.596995 CCTTTAATCCTCTGCTAGTTCGATTAG 59.403 40.741 0.00 0.00 0.00 1.73
2089 3196 7.818997 TTAATCCTCTGCTAGTTCGATTAGA 57.181 36.000 8.26 0.00 0.00 2.10
2090 3197 5.957842 ATCCTCTGCTAGTTCGATTAGAG 57.042 43.478 8.26 0.00 33.29 2.43
2091 3198 5.037383 TCCTCTGCTAGTTCGATTAGAGA 57.963 43.478 8.26 7.23 34.97 3.10
2138 3293 5.745227 TGGTCATTCCTATCCTTTGACTTC 58.255 41.667 0.00 0.00 37.45 3.01
2155 3310 9.746711 CTTTGACTTCTTTCTTATCAATACACG 57.253 33.333 0.00 0.00 0.00 4.49
2165 3320 6.163476 TCTTATCAATACACGCCATACATCC 58.837 40.000 0.00 0.00 0.00 3.51
2180 3335 6.684686 CCATACATCCATTAGATTTGCTTGG 58.315 40.000 0.00 0.00 30.59 3.61
2212 3367 3.720002 AGGTGTGGTAATAATAGGGTGGG 59.280 47.826 0.00 0.00 0.00 4.61
2213 3368 3.181437 GGTGTGGTAATAATAGGGTGGGG 60.181 52.174 0.00 0.00 0.00 4.96
2247 3402 3.347077 AGAAGCATGTTCTCTTCCAGG 57.653 47.619 7.06 0.00 39.48 4.45
2302 3492 1.303643 CAGGAGTCCCAAGCAACCC 60.304 63.158 5.25 0.00 33.88 4.11
2318 3508 1.327303 ACCCGCAAATGCTCAGAAAA 58.673 45.000 3.63 0.00 39.32 2.29
2342 3532 5.512753 TGACAGCAAAACATAAAGCAGAA 57.487 34.783 0.00 0.00 0.00 3.02
2346 3536 5.750067 ACAGCAAAACATAAAGCAGAACAAG 59.250 36.000 0.00 0.00 0.00 3.16
2371 3561 0.035056 GCCTGCATTCAGTACCACCT 60.035 55.000 0.00 0.00 38.66 4.00
2376 3566 5.680619 CCTGCATTCAGTACCACCTATTAA 58.319 41.667 0.00 0.00 38.66 1.40
2378 3568 5.123227 TGCATTCAGTACCACCTATTAAGC 58.877 41.667 0.00 0.00 0.00 3.09
2430 3621 1.139256 CAGCAGCATCTCATGGAGACT 59.861 52.381 0.00 0.00 41.76 3.24
2431 3622 2.364647 CAGCAGCATCTCATGGAGACTA 59.635 50.000 0.00 0.00 41.76 2.59
2432 3623 2.364970 AGCAGCATCTCATGGAGACTAC 59.635 50.000 0.00 0.00 41.76 2.73
2520 3717 8.237811 ACATGTGGTTTCTGTTTTTAGAGATT 57.762 30.769 0.00 0.00 0.00 2.40
2521 3718 8.695456 ACATGTGGTTTCTGTTTTTAGAGATTT 58.305 29.630 0.00 0.00 0.00 2.17
2522 3719 8.971321 CATGTGGTTTCTGTTTTTAGAGATTTG 58.029 33.333 0.00 0.00 0.00 2.32
2523 3720 8.287439 TGTGGTTTCTGTTTTTAGAGATTTGA 57.713 30.769 0.00 0.00 0.00 2.69
2524 3721 8.912988 TGTGGTTTCTGTTTTTAGAGATTTGAT 58.087 29.630 0.00 0.00 0.00 2.57
2525 3722 9.399403 GTGGTTTCTGTTTTTAGAGATTTGATC 57.601 33.333 0.00 0.00 0.00 2.92
2526 3723 9.354673 TGGTTTCTGTTTTTAGAGATTTGATCT 57.645 29.630 0.00 0.00 43.70 2.75
2556 3759 9.869844 GACATATGATAAAACTCATTTTCCTCG 57.130 33.333 10.38 0.00 38.91 4.63
2577 3780 0.877743 GTTGTTCTCTGCAGCCCTTC 59.122 55.000 9.47 0.00 0.00 3.46
2610 3813 2.040278 AGCTTTGCAGGATGGTGACTTA 59.960 45.455 0.00 0.00 35.86 2.24
2775 4021 4.910458 ACAAAGCTAATGGTACCTGAGT 57.090 40.909 14.36 0.00 0.00 3.41
2936 4516 9.588096 AGTTATACCTTTTTGGAGTTTTCATCT 57.412 29.630 0.00 0.00 39.71 2.90
2951 4531 6.606395 AGTTTTCATCTACTACCCTCGTATGT 59.394 38.462 0.00 0.00 0.00 2.29
2962 4557 5.160607 ACCCTCGTATGTTTGAAGATGAA 57.839 39.130 0.00 0.00 0.00 2.57
3004 4599 1.692519 ACCACAAGCTTAGTCGGAAGT 59.307 47.619 0.00 0.00 0.00 3.01
3053 4648 9.289782 GTTTCCCAAGCAATCATATAGTCTATT 57.710 33.333 0.00 0.00 0.00 1.73
3054 4649 9.866655 TTTCCCAAGCAATCATATAGTCTATTT 57.133 29.630 0.00 0.00 0.00 1.40
3177 4776 7.354751 AGAATCCTCATAACTCTGGTTCTAC 57.645 40.000 0.00 0.00 36.92 2.59
3184 4783 7.547370 CCTCATAACTCTGGTTCTACTTTCTTG 59.453 40.741 0.00 0.00 36.92 3.02
3192 4791 7.565680 TCTGGTTCTACTTTCTTGTTCTCTTT 58.434 34.615 0.00 0.00 0.00 2.52
3321 4920 0.252696 TGGAGGCCCATCAGTACACT 60.253 55.000 0.00 0.00 37.58 3.55
3363 4962 1.788229 TCGAGTGCCTTATCCATCCA 58.212 50.000 0.00 0.00 0.00 3.41
3621 5220 2.599281 TCCGTCCAGAAGGTCGCA 60.599 61.111 0.00 0.00 43.68 5.10
3653 5252 3.907221 AGCCATGATCTTAATTGCTGGT 58.093 40.909 0.00 0.00 0.00 4.00
3686 5285 1.393539 CGAAATAAGCCGAGGTGTGTG 59.606 52.381 0.00 0.00 0.00 3.82
3772 5371 0.390340 TGTGCTTGCGATCCTGTCTC 60.390 55.000 0.00 0.00 0.00 3.36
3778 5378 3.529533 CTTGCGATCCTGTCTCATCTTT 58.470 45.455 0.00 0.00 0.00 2.52
3792 5392 6.091305 TGTCTCATCTTTTACTGAAATGAGCG 59.909 38.462 5.92 0.00 35.65 5.03
3826 5426 8.197439 GCTCTGGTTTAATAATAAATTGTGCCT 58.803 33.333 0.00 0.00 33.76 4.75
3900 5501 3.304257 CCATTAGCAATTTAGCTGCCTCG 60.304 47.826 0.00 0.00 46.11 4.63
4284 5885 7.497249 GCACCATATGATTCTCCTATATTGGAC 59.503 40.741 3.65 0.00 31.94 4.02
4297 5898 0.591170 ATTGGACAGTTTCAACGGCG 59.409 50.000 4.80 4.80 0.00 6.46
4308 5909 0.602638 TCAACGGCGAAAGAGCACAT 60.603 50.000 16.62 0.00 39.27 3.21
4310 5911 1.298859 AACGGCGAAAGAGCACATCC 61.299 55.000 16.62 0.00 39.27 3.51
4339 5940 5.356751 TGTGTAGTGATATTTGTCCAATGCC 59.643 40.000 0.00 0.00 0.00 4.40
4347 5948 2.655090 TTGTCCAATGCCTCTTCACA 57.345 45.000 0.00 0.00 0.00 3.58
4380 5981 3.141398 GTTCAGAGGATGTTTGCACTCA 58.859 45.455 2.98 0.00 32.52 3.41
4435 6036 9.430623 TGAATCACGTCTGTAAAGATGATAAAA 57.569 29.630 9.23 0.00 0.00 1.52
4440 6041 8.169268 CACGTCTGTAAAGATGATAAAAAGGTC 58.831 37.037 9.23 0.00 0.00 3.85
4457 6058 0.179018 GTCTCCCTGGTGCAGTTTGT 60.179 55.000 0.00 0.00 0.00 2.83
4458 6059 0.550914 TCTCCCTGGTGCAGTTTGTT 59.449 50.000 0.00 0.00 0.00 2.83
4484 6085 4.921834 GAGGGCCTCTCTTCAACG 57.078 61.111 26.44 0.00 39.38 4.10
4485 6086 1.448717 GAGGGCCTCTCTTCAACGC 60.449 63.158 26.44 0.00 39.38 4.84
4486 6087 2.815647 GGGCCTCTCTTCAACGCG 60.816 66.667 3.53 3.53 0.00 6.01
4487 6088 2.261671 GGCCTCTCTTCAACGCGA 59.738 61.111 15.93 0.00 0.00 5.87
4488 6089 1.374252 GGCCTCTCTTCAACGCGAA 60.374 57.895 15.93 0.00 0.00 4.70
4497 6098 3.169207 CTTCAACGCGAAGGTGTTTAG 57.831 47.619 15.93 1.87 46.39 1.85
4498 6099 0.863144 TCAACGCGAAGGTGTTTAGC 59.137 50.000 15.93 0.00 44.09 3.09
4499 6100 0.865769 CAACGCGAAGGTGTTTAGCT 59.134 50.000 15.93 0.00 44.09 3.32
4500 6101 1.263217 CAACGCGAAGGTGTTTAGCTT 59.737 47.619 15.93 0.00 44.09 3.74
4501 6102 1.589803 ACGCGAAGGTGTTTAGCTTT 58.410 45.000 15.93 0.00 44.18 3.51
4502 6103 1.263217 ACGCGAAGGTGTTTAGCTTTG 59.737 47.619 15.93 0.00 44.18 2.77
4503 6104 1.263217 CGCGAAGGTGTTTAGCTTTGT 59.737 47.619 0.00 0.00 44.18 2.83
4504 6105 2.650608 GCGAAGGTGTTTAGCTTTGTG 58.349 47.619 0.00 0.00 44.18 3.33
4505 6106 2.032924 GCGAAGGTGTTTAGCTTTGTGT 59.967 45.455 0.00 0.00 44.18 3.72
4506 6107 3.488553 GCGAAGGTGTTTAGCTTTGTGTT 60.489 43.478 0.00 0.00 44.18 3.32
4507 6108 4.035017 CGAAGGTGTTTAGCTTTGTGTTG 58.965 43.478 0.00 0.00 44.18 3.33
4508 6109 3.436700 AGGTGTTTAGCTTTGTGTTGC 57.563 42.857 0.00 0.00 0.00 4.17
4509 6110 3.023832 AGGTGTTTAGCTTTGTGTTGCT 58.976 40.909 0.00 0.00 42.67 3.91
4510 6111 3.447229 AGGTGTTTAGCTTTGTGTTGCTT 59.553 39.130 0.00 0.00 40.35 3.91
4511 6112 4.081697 AGGTGTTTAGCTTTGTGTTGCTTT 60.082 37.500 0.00 0.00 40.35 3.51
4512 6113 4.267690 GGTGTTTAGCTTTGTGTTGCTTTC 59.732 41.667 0.00 0.00 40.35 2.62
4513 6114 5.102313 GTGTTTAGCTTTGTGTTGCTTTCT 58.898 37.500 0.00 0.00 40.35 2.52
4514 6115 5.576774 GTGTTTAGCTTTGTGTTGCTTTCTT 59.423 36.000 0.00 0.00 40.35 2.52
4515 6116 6.090763 GTGTTTAGCTTTGTGTTGCTTTCTTT 59.909 34.615 0.00 0.00 40.35 2.52
4516 6117 7.274686 GTGTTTAGCTTTGTGTTGCTTTCTTTA 59.725 33.333 0.00 0.00 40.35 1.85
4517 6118 7.815068 TGTTTAGCTTTGTGTTGCTTTCTTTAA 59.185 29.630 0.00 0.00 40.35 1.52
4518 6119 8.817100 GTTTAGCTTTGTGTTGCTTTCTTTAAT 58.183 29.630 0.00 0.00 40.35 1.40
4519 6120 8.940768 TTAGCTTTGTGTTGCTTTCTTTAATT 57.059 26.923 0.00 0.00 40.35 1.40
4520 6121 7.237920 AGCTTTGTGTTGCTTTCTTTAATTG 57.762 32.000 0.00 0.00 35.86 2.32
4521 6122 6.818142 AGCTTTGTGTTGCTTTCTTTAATTGT 59.182 30.769 0.00 0.00 35.86 2.71
4522 6123 7.334171 AGCTTTGTGTTGCTTTCTTTAATTGTT 59.666 29.630 0.00 0.00 35.86 2.83
4523 6124 7.962373 GCTTTGTGTTGCTTTCTTTAATTGTTT 59.038 29.630 0.00 0.00 0.00 2.83
4526 6127 9.646427 TTGTGTTGCTTTCTTTAATTGTTTAGT 57.354 25.926 0.00 0.00 0.00 2.24
4558 6159 6.899393 TTTTTCATGCATAGACCAGTTTCT 57.101 33.333 0.00 0.00 0.00 2.52
4559 6160 6.899393 TTTTCATGCATAGACCAGTTTCTT 57.101 33.333 0.00 0.00 0.00 2.52
4560 6161 6.899393 TTTCATGCATAGACCAGTTTCTTT 57.101 33.333 0.00 0.00 0.00 2.52
4561 6162 6.500684 TTCATGCATAGACCAGTTTCTTTC 57.499 37.500 0.00 0.00 0.00 2.62
4562 6163 5.559770 TCATGCATAGACCAGTTTCTTTCA 58.440 37.500 0.00 0.00 0.00 2.69
4563 6164 6.182627 TCATGCATAGACCAGTTTCTTTCAT 58.817 36.000 0.00 0.00 0.00 2.57
4564 6165 6.660521 TCATGCATAGACCAGTTTCTTTCATT 59.339 34.615 0.00 0.00 0.00 2.57
4565 6166 6.899393 TGCATAGACCAGTTTCTTTCATTT 57.101 33.333 0.00 0.00 0.00 2.32
4566 6167 7.994425 TGCATAGACCAGTTTCTTTCATTTA 57.006 32.000 0.00 0.00 0.00 1.40
4567 6168 8.402798 TGCATAGACCAGTTTCTTTCATTTAA 57.597 30.769 0.00 0.00 0.00 1.52
4568 6169 8.514594 TGCATAGACCAGTTTCTTTCATTTAAG 58.485 33.333 0.00 0.00 0.00 1.85
4569 6170 8.515414 GCATAGACCAGTTTCTTTCATTTAAGT 58.485 33.333 0.00 0.00 0.00 2.24
4570 6171 9.831737 CATAGACCAGTTTCTTTCATTTAAGTG 57.168 33.333 0.00 0.00 0.00 3.16
4571 6172 7.881775 AGACCAGTTTCTTTCATTTAAGTGT 57.118 32.000 0.00 0.00 0.00 3.55
4572 6173 8.293699 AGACCAGTTTCTTTCATTTAAGTGTT 57.706 30.769 0.00 0.00 0.00 3.32
4573 6174 8.749354 AGACCAGTTTCTTTCATTTAAGTGTTT 58.251 29.630 0.00 0.00 0.00 2.83
4574 6175 9.366216 GACCAGTTTCTTTCATTTAAGTGTTTT 57.634 29.630 0.00 0.00 0.00 2.43
4575 6176 9.150348 ACCAGTTTCTTTCATTTAAGTGTTTTG 57.850 29.630 0.00 0.00 0.00 2.44
4576 6177 8.116136 CCAGTTTCTTTCATTTAAGTGTTTTGC 58.884 33.333 0.00 0.00 0.00 3.68
4577 6178 8.655092 CAGTTTCTTTCATTTAAGTGTTTTGCA 58.345 29.630 0.00 0.00 0.00 4.08
4578 6179 9.382275 AGTTTCTTTCATTTAAGTGTTTTGCAT 57.618 25.926 0.00 0.00 0.00 3.96
4584 6185 9.638239 TTTCATTTAAGTGTTTTGCATAGATCC 57.362 29.630 0.00 0.00 0.00 3.36
4585 6186 8.347004 TCATTTAAGTGTTTTGCATAGATCCA 57.653 30.769 0.00 0.00 0.00 3.41
4586 6187 8.243426 TCATTTAAGTGTTTTGCATAGATCCAC 58.757 33.333 0.00 0.00 0.00 4.02
4587 6188 4.685169 AAGTGTTTTGCATAGATCCACG 57.315 40.909 0.00 0.00 0.00 4.94
4588 6189 3.674997 AGTGTTTTGCATAGATCCACGT 58.325 40.909 0.00 0.00 0.00 4.49
4589 6190 3.436704 AGTGTTTTGCATAGATCCACGTG 59.563 43.478 9.08 9.08 0.00 4.49
4590 6191 3.435327 GTGTTTTGCATAGATCCACGTGA 59.565 43.478 19.30 3.36 0.00 4.35
4591 6192 3.435327 TGTTTTGCATAGATCCACGTGAC 59.565 43.478 19.30 8.16 0.00 3.67
4592 6193 3.610040 TTTGCATAGATCCACGTGACT 57.390 42.857 19.30 15.10 0.00 3.41
4593 6194 4.729227 TTTGCATAGATCCACGTGACTA 57.271 40.909 19.30 16.71 0.00 2.59
4594 6195 3.990318 TGCATAGATCCACGTGACTAG 57.010 47.619 19.30 11.52 0.00 2.57
4595 6196 2.034685 TGCATAGATCCACGTGACTAGC 59.965 50.000 19.30 18.79 0.00 3.42
4596 6197 2.034685 GCATAGATCCACGTGACTAGCA 59.965 50.000 19.30 0.00 0.00 3.49
4597 6198 3.633235 CATAGATCCACGTGACTAGCAC 58.367 50.000 19.30 7.10 44.21 4.40
4598 6199 1.840737 AGATCCACGTGACTAGCACT 58.159 50.000 19.30 3.52 45.49 4.40
4599 6200 3.000684 AGATCCACGTGACTAGCACTA 57.999 47.619 19.30 0.00 45.49 2.74
4600 6201 3.556999 AGATCCACGTGACTAGCACTAT 58.443 45.455 19.30 0.00 45.49 2.12
4601 6202 3.954904 AGATCCACGTGACTAGCACTATT 59.045 43.478 19.30 0.00 45.49 1.73
4602 6203 4.402793 AGATCCACGTGACTAGCACTATTT 59.597 41.667 19.30 0.00 45.49 1.40
4603 6204 4.106029 TCCACGTGACTAGCACTATTTC 57.894 45.455 19.30 0.00 45.49 2.17
4604 6205 3.762288 TCCACGTGACTAGCACTATTTCT 59.238 43.478 19.30 0.00 45.49 2.52
4605 6206 4.219944 TCCACGTGACTAGCACTATTTCTT 59.780 41.667 19.30 0.00 45.49 2.52
4606 6207 4.929808 CCACGTGACTAGCACTATTTCTTT 59.070 41.667 19.30 0.00 45.49 2.52
4607 6208 5.062308 CCACGTGACTAGCACTATTTCTTTC 59.938 44.000 19.30 0.00 45.49 2.62
4608 6209 5.864474 CACGTGACTAGCACTATTTCTTTCT 59.136 40.000 10.90 0.00 45.49 2.52
4609 6210 6.366332 CACGTGACTAGCACTATTTCTTTCTT 59.634 38.462 10.90 0.00 45.49 2.52
4610 6211 6.366332 ACGTGACTAGCACTATTTCTTTCTTG 59.634 38.462 13.14 0.00 45.49 3.02
4611 6212 6.183360 CGTGACTAGCACTATTTCTTTCTTGG 60.183 42.308 13.14 0.00 45.49 3.61
4612 6213 6.092807 GTGACTAGCACTATTTCTTTCTTGGG 59.907 42.308 9.26 0.00 44.27 4.12
4613 6214 6.128138 ACTAGCACTATTTCTTTCTTGGGT 57.872 37.500 0.00 0.00 0.00 4.51
4614 6215 6.174049 ACTAGCACTATTTCTTTCTTGGGTC 58.826 40.000 0.00 0.00 0.00 4.46
4615 6216 4.985538 AGCACTATTTCTTTCTTGGGTCA 58.014 39.130 0.00 0.00 0.00 4.02
4616 6217 5.574188 AGCACTATTTCTTTCTTGGGTCAT 58.426 37.500 0.00 0.00 0.00 3.06
4617 6218 5.649831 AGCACTATTTCTTTCTTGGGTCATC 59.350 40.000 0.00 0.00 0.00 2.92
4618 6219 5.415701 GCACTATTTCTTTCTTGGGTCATCA 59.584 40.000 0.00 0.00 0.00 3.07
4619 6220 6.071952 GCACTATTTCTTTCTTGGGTCATCAA 60.072 38.462 0.00 0.00 0.00 2.57
4620 6221 7.523709 GCACTATTTCTTTCTTGGGTCATCAAA 60.524 37.037 0.00 0.00 0.00 2.69
4621 6222 7.809806 CACTATTTCTTTCTTGGGTCATCAAAC 59.190 37.037 0.00 0.00 0.00 2.93
4622 6223 6.983906 ATTTCTTTCTTGGGTCATCAAACT 57.016 33.333 0.00 0.00 0.00 2.66
4623 6224 6.391227 TTTCTTTCTTGGGTCATCAAACTC 57.609 37.500 0.00 0.00 0.00 3.01
4624 6225 4.398319 TCTTTCTTGGGTCATCAAACTCC 58.602 43.478 0.00 0.00 0.00 3.85
4625 6226 4.104738 TCTTTCTTGGGTCATCAAACTCCT 59.895 41.667 0.00 0.00 0.00 3.69
4626 6227 3.703001 TCTTGGGTCATCAAACTCCTC 57.297 47.619 0.00 0.00 0.00 3.71
4627 6228 3.251484 TCTTGGGTCATCAAACTCCTCT 58.749 45.455 0.00 0.00 0.00 3.69
4628 6229 3.261897 TCTTGGGTCATCAAACTCCTCTC 59.738 47.826 0.00 0.00 0.00 3.20
4629 6230 1.909302 TGGGTCATCAAACTCCTCTCC 59.091 52.381 0.00 0.00 0.00 3.71
4630 6231 2.192263 GGGTCATCAAACTCCTCTCCT 58.808 52.381 0.00 0.00 0.00 3.69
4631 6232 2.573915 GGGTCATCAAACTCCTCTCCTT 59.426 50.000 0.00 0.00 0.00 3.36
4632 6233 3.369997 GGGTCATCAAACTCCTCTCCTTC 60.370 52.174 0.00 0.00 0.00 3.46
4633 6234 3.517500 GGTCATCAAACTCCTCTCCTTCT 59.482 47.826 0.00 0.00 0.00 2.85
4634 6235 4.382577 GGTCATCAAACTCCTCTCCTTCTC 60.383 50.000 0.00 0.00 0.00 2.87
4635 6236 4.466015 GTCATCAAACTCCTCTCCTTCTCT 59.534 45.833 0.00 0.00 0.00 3.10
4636 6237 5.046663 GTCATCAAACTCCTCTCCTTCTCTT 60.047 44.000 0.00 0.00 0.00 2.85
4637 6238 6.153680 GTCATCAAACTCCTCTCCTTCTCTTA 59.846 42.308 0.00 0.00 0.00 2.10
4638 6239 6.726299 TCATCAAACTCCTCTCCTTCTCTTAA 59.274 38.462 0.00 0.00 0.00 1.85
4639 6240 7.401493 TCATCAAACTCCTCTCCTTCTCTTAAT 59.599 37.037 0.00 0.00 0.00 1.40
4640 6241 7.560796 TCAAACTCCTCTCCTTCTCTTAATT 57.439 36.000 0.00 0.00 0.00 1.40
4641 6242 8.666129 TCAAACTCCTCTCCTTCTCTTAATTA 57.334 34.615 0.00 0.00 0.00 1.40
4642 6243 9.273137 TCAAACTCCTCTCCTTCTCTTAATTAT 57.727 33.333 0.00 0.00 0.00 1.28
4643 6244 9.541143 CAAACTCCTCTCCTTCTCTTAATTATC 57.459 37.037 0.00 0.00 0.00 1.75
4644 6245 9.500701 AAACTCCTCTCCTTCTCTTAATTATCT 57.499 33.333 0.00 0.00 0.00 1.98
4645 6246 9.500701 AACTCCTCTCCTTCTCTTAATTATCTT 57.499 33.333 0.00 0.00 0.00 2.40
4646 6247 8.923270 ACTCCTCTCCTTCTCTTAATTATCTTG 58.077 37.037 0.00 0.00 0.00 3.02
4647 6248 8.846423 TCCTCTCCTTCTCTTAATTATCTTGT 57.154 34.615 0.00 0.00 0.00 3.16
4648 6249 9.937876 TCCTCTCCTTCTCTTAATTATCTTGTA 57.062 33.333 0.00 0.00 0.00 2.41
4675 6276 9.793259 ACATCAGATTTTCTTTTACCTAGTTGA 57.207 29.630 0.00 0.00 0.00 3.18
4677 6278 9.793259 ATCAGATTTTCTTTTACCTAGTTGACA 57.207 29.630 0.00 0.00 0.00 3.58
4678 6279 9.273016 TCAGATTTTCTTTTACCTAGTTGACAG 57.727 33.333 0.00 0.00 0.00 3.51
4679 6280 8.017946 CAGATTTTCTTTTACCTAGTTGACAGC 58.982 37.037 0.00 0.00 0.00 4.40
4680 6281 7.939588 AGATTTTCTTTTACCTAGTTGACAGCT 59.060 33.333 0.00 0.00 0.00 4.24
4681 6282 7.875327 TTTTCTTTTACCTAGTTGACAGCTT 57.125 32.000 0.00 0.00 0.00 3.74
4682 6283 7.875327 TTTCTTTTACCTAGTTGACAGCTTT 57.125 32.000 0.00 0.00 0.00 3.51
4683 6284 8.967664 TTTCTTTTACCTAGTTGACAGCTTTA 57.032 30.769 0.00 0.00 0.00 1.85
4684 6285 8.603242 TTCTTTTACCTAGTTGACAGCTTTAG 57.397 34.615 0.00 0.00 0.00 1.85
4685 6286 6.649557 TCTTTTACCTAGTTGACAGCTTTAGC 59.350 38.462 0.00 0.00 42.49 3.09
4686 6287 5.477607 TTACCTAGTTGACAGCTTTAGCA 57.522 39.130 4.33 0.00 45.16 3.49
4687 6288 3.665190 ACCTAGTTGACAGCTTTAGCAC 58.335 45.455 4.33 0.00 45.16 4.40
4688 6289 3.071023 ACCTAGTTGACAGCTTTAGCACA 59.929 43.478 4.33 0.00 45.16 4.57
4689 6290 4.256920 CCTAGTTGACAGCTTTAGCACAT 58.743 43.478 4.33 0.00 45.16 3.21
4690 6291 4.093998 CCTAGTTGACAGCTTTAGCACATG 59.906 45.833 4.33 0.00 45.16 3.21
4691 6292 3.480470 AGTTGACAGCTTTAGCACATGT 58.520 40.909 4.33 0.00 45.16 3.21
4692 6293 4.641396 AGTTGACAGCTTTAGCACATGTA 58.359 39.130 0.00 0.00 45.16 2.29
4693 6294 5.248640 AGTTGACAGCTTTAGCACATGTAT 58.751 37.500 0.00 0.00 45.16 2.29
4694 6295 5.122869 AGTTGACAGCTTTAGCACATGTATG 59.877 40.000 0.00 0.00 45.16 2.39
4695 6296 4.831107 TGACAGCTTTAGCACATGTATGA 58.169 39.130 0.00 0.00 45.16 2.15
4696 6297 4.872124 TGACAGCTTTAGCACATGTATGAG 59.128 41.667 0.00 0.00 45.16 2.90
4697 6298 4.194640 ACAGCTTTAGCACATGTATGAGG 58.805 43.478 0.00 0.00 45.16 3.86
4698 6299 4.194640 CAGCTTTAGCACATGTATGAGGT 58.805 43.478 0.00 0.00 45.16 3.85
4699 6300 4.034858 CAGCTTTAGCACATGTATGAGGTG 59.965 45.833 0.00 5.02 45.16 4.00
4700 6301 3.313526 GCTTTAGCACATGTATGAGGTGG 59.686 47.826 0.00 0.00 36.83 4.61
4701 6302 4.769688 CTTTAGCACATGTATGAGGTGGA 58.230 43.478 0.00 0.00 36.83 4.02
4702 6303 2.996249 AGCACATGTATGAGGTGGAG 57.004 50.000 0.00 0.00 36.83 3.86
4703 6304 1.134280 AGCACATGTATGAGGTGGAGC 60.134 52.381 0.00 0.00 36.83 4.70
4704 6305 1.407299 GCACATGTATGAGGTGGAGCA 60.407 52.381 0.00 0.00 36.83 4.26
4705 6306 2.283298 CACATGTATGAGGTGGAGCAC 58.717 52.381 0.00 0.00 32.48 4.40
4706 6307 2.093288 CACATGTATGAGGTGGAGCACT 60.093 50.000 0.00 0.00 32.48 4.40
4707 6308 3.132824 CACATGTATGAGGTGGAGCACTA 59.867 47.826 0.00 0.00 32.48 2.74
4708 6309 3.386078 ACATGTATGAGGTGGAGCACTAG 59.614 47.826 0.00 0.00 34.40 2.57
4709 6310 3.382083 TGTATGAGGTGGAGCACTAGA 57.618 47.619 0.00 0.00 34.40 2.43
4710 6311 3.708451 TGTATGAGGTGGAGCACTAGAA 58.292 45.455 0.00 0.00 34.40 2.10
4711 6312 3.701542 TGTATGAGGTGGAGCACTAGAAG 59.298 47.826 0.00 0.00 34.40 2.85
4712 6313 1.561643 TGAGGTGGAGCACTAGAAGG 58.438 55.000 0.00 0.00 34.40 3.46
4713 6314 1.203187 TGAGGTGGAGCACTAGAAGGT 60.203 52.381 0.00 0.00 34.40 3.50
4714 6315 1.478916 GAGGTGGAGCACTAGAAGGTC 59.521 57.143 0.00 3.63 34.40 3.85
4715 6316 1.077993 AGGTGGAGCACTAGAAGGTCT 59.922 52.381 15.11 0.00 34.40 3.85
4716 6317 1.478916 GGTGGAGCACTAGAAGGTCTC 59.521 57.143 15.11 10.37 34.40 3.36
4717 6318 2.171840 GTGGAGCACTAGAAGGTCTCA 58.828 52.381 15.11 10.46 34.14 3.27
4718 6319 2.763448 GTGGAGCACTAGAAGGTCTCAT 59.237 50.000 15.11 0.00 34.14 2.90
4719 6320 2.762887 TGGAGCACTAGAAGGTCTCATG 59.237 50.000 15.11 0.00 34.14 3.07
4720 6321 2.102252 GGAGCACTAGAAGGTCTCATGG 59.898 54.545 15.11 0.00 34.14 3.66
4721 6322 2.102252 GAGCACTAGAAGGTCTCATGGG 59.898 54.545 0.00 0.00 0.00 4.00
4722 6323 1.474143 GCACTAGAAGGTCTCATGGGC 60.474 57.143 0.00 0.00 0.00 5.36
4723 6324 2.114616 CACTAGAAGGTCTCATGGGCT 58.885 52.381 0.00 0.00 0.00 5.19
4724 6325 2.102252 CACTAGAAGGTCTCATGGGCTC 59.898 54.545 0.00 0.00 0.00 4.70
4725 6326 2.023501 ACTAGAAGGTCTCATGGGCTCT 60.024 50.000 0.00 0.00 0.00 4.09
4726 6327 1.963985 AGAAGGTCTCATGGGCTCTT 58.036 50.000 0.00 0.00 0.00 2.85
4727 6328 1.836802 AGAAGGTCTCATGGGCTCTTC 59.163 52.381 15.54 15.54 0.00 2.87
4728 6329 1.556911 GAAGGTCTCATGGGCTCTTCA 59.443 52.381 17.35 0.00 33.10 3.02
4729 6330 1.202330 AGGTCTCATGGGCTCTTCAG 58.798 55.000 0.00 0.00 0.00 3.02
4730 6331 1.198713 GGTCTCATGGGCTCTTCAGA 58.801 55.000 0.00 0.00 0.00 3.27
4731 6332 1.767681 GGTCTCATGGGCTCTTCAGAT 59.232 52.381 0.00 0.00 0.00 2.90
4732 6333 2.485124 GGTCTCATGGGCTCTTCAGATG 60.485 54.545 0.00 0.00 0.00 2.90
4733 6334 2.170187 GTCTCATGGGCTCTTCAGATGT 59.830 50.000 0.00 0.00 0.00 3.06
4734 6335 2.169978 TCTCATGGGCTCTTCAGATGTG 59.830 50.000 0.00 0.00 0.00 3.21
4735 6336 1.211212 TCATGGGCTCTTCAGATGTGG 59.789 52.381 0.00 0.00 0.00 4.17
4736 6337 1.064906 CATGGGCTCTTCAGATGTGGT 60.065 52.381 0.00 0.00 0.00 4.16
4737 6338 1.067295 TGGGCTCTTCAGATGTGGTT 58.933 50.000 0.00 0.00 0.00 3.67
4738 6339 1.271543 TGGGCTCTTCAGATGTGGTTG 60.272 52.381 0.00 0.00 0.00 3.77
4739 6340 1.271597 GGGCTCTTCAGATGTGGTTGT 60.272 52.381 0.00 0.00 0.00 3.32
4740 6341 2.508526 GGCTCTTCAGATGTGGTTGTT 58.491 47.619 0.00 0.00 0.00 2.83
4741 6342 2.227388 GGCTCTTCAGATGTGGTTGTTG 59.773 50.000 0.00 0.00 0.00 3.33
4742 6343 2.351157 GCTCTTCAGATGTGGTTGTTGC 60.351 50.000 0.00 0.00 0.00 4.17
4743 6344 3.144506 CTCTTCAGATGTGGTTGTTGCT 58.855 45.455 0.00 0.00 0.00 3.91
4744 6345 2.880268 TCTTCAGATGTGGTTGTTGCTG 59.120 45.455 0.00 0.00 0.00 4.41
4745 6346 0.953727 TCAGATGTGGTTGTTGCTGC 59.046 50.000 0.00 0.00 0.00 5.25
4746 6347 0.956633 CAGATGTGGTTGTTGCTGCT 59.043 50.000 0.00 0.00 0.00 4.24
4747 6348 2.153645 CAGATGTGGTTGTTGCTGCTA 58.846 47.619 0.00 0.00 0.00 3.49
4748 6349 2.161012 CAGATGTGGTTGTTGCTGCTAG 59.839 50.000 0.00 0.00 0.00 3.42
4749 6350 1.470098 GATGTGGTTGTTGCTGCTAGG 59.530 52.381 0.00 0.00 0.00 3.02
4750 6351 1.172180 TGTGGTTGTTGCTGCTAGGC 61.172 55.000 0.00 0.00 0.00 3.93
4751 6352 1.150308 TGGTTGTTGCTGCTAGGCA 59.850 52.632 0.00 0.00 40.74 4.75
4757 6358 4.095590 TGCTGCTAGGCAAAACCC 57.904 55.556 0.00 0.00 38.41 4.11
4758 6359 1.460255 TGCTGCTAGGCAAAACCCT 59.540 52.632 0.00 0.00 38.41 4.34
4759 6360 0.609131 TGCTGCTAGGCAAAACCCTC 60.609 55.000 0.00 0.00 38.41 4.30
4760 6361 1.315981 GCTGCTAGGCAAAACCCTCC 61.316 60.000 0.00 0.00 38.41 4.30
4761 6362 0.681243 CTGCTAGGCAAAACCCTCCC 60.681 60.000 0.00 0.00 38.41 4.30
4762 6363 1.140134 TGCTAGGCAAAACCCTCCCT 61.140 55.000 0.00 0.00 40.58 4.20
4763 6364 0.039764 GCTAGGCAAAACCCTCCCTT 59.960 55.000 0.00 0.00 40.58 3.95
4764 6365 1.955683 GCTAGGCAAAACCCTCCCTTC 60.956 57.143 0.00 0.00 40.58 3.46
4765 6366 1.636003 CTAGGCAAAACCCTCCCTTCT 59.364 52.381 0.00 0.00 40.58 2.85
4766 6367 0.113190 AGGCAAAACCCTCCCTTCTG 59.887 55.000 0.00 0.00 40.58 3.02
4767 6368 0.178961 GGCAAAACCCTCCCTTCTGT 60.179 55.000 0.00 0.00 0.00 3.41
4768 6369 1.248486 GCAAAACCCTCCCTTCTGTC 58.752 55.000 0.00 0.00 0.00 3.51
4769 6370 1.478654 GCAAAACCCTCCCTTCTGTCA 60.479 52.381 0.00 0.00 0.00 3.58
4770 6371 2.819348 GCAAAACCCTCCCTTCTGTCAT 60.819 50.000 0.00 0.00 0.00 3.06
4771 6372 2.821969 CAAAACCCTCCCTTCTGTCATG 59.178 50.000 0.00 0.00 0.00 3.07
4772 6373 0.995024 AACCCTCCCTTCTGTCATGG 59.005 55.000 0.00 0.00 0.00 3.66
4773 6374 0.119155 ACCCTCCCTTCTGTCATGGA 59.881 55.000 0.00 0.00 0.00 3.41
4774 6375 1.289160 CCCTCCCTTCTGTCATGGAA 58.711 55.000 0.00 0.00 0.00 3.53
4775 6376 1.635487 CCCTCCCTTCTGTCATGGAAA 59.365 52.381 0.00 0.00 0.00 3.13
4776 6377 2.243221 CCCTCCCTTCTGTCATGGAAAT 59.757 50.000 0.00 0.00 0.00 2.17
4777 6378 3.549794 CCTCCCTTCTGTCATGGAAATC 58.450 50.000 0.00 0.00 0.00 2.17
4778 6379 3.201290 CTCCCTTCTGTCATGGAAATCG 58.799 50.000 0.00 0.00 0.00 3.34
4779 6380 2.837591 TCCCTTCTGTCATGGAAATCGA 59.162 45.455 0.00 0.00 0.00 3.59
4780 6381 3.455910 TCCCTTCTGTCATGGAAATCGAT 59.544 43.478 0.00 0.00 0.00 3.59
4781 6382 3.562973 CCCTTCTGTCATGGAAATCGATG 59.437 47.826 0.00 0.00 34.02 3.84
4782 6383 3.562973 CCTTCTGTCATGGAAATCGATGG 59.437 47.826 0.00 0.00 33.61 3.51
4783 6384 2.564771 TCTGTCATGGAAATCGATGGC 58.435 47.619 0.00 3.41 37.23 4.40
4784 6385 2.093021 TCTGTCATGGAAATCGATGGCA 60.093 45.455 11.38 11.38 42.82 4.92
4785 6386 2.882761 CTGTCATGGAAATCGATGGCAT 59.117 45.455 12.14 0.00 43.72 4.40
4786 6387 2.619646 TGTCATGGAAATCGATGGCATG 59.380 45.455 3.81 0.00 40.78 4.06
4787 6388 2.620115 GTCATGGAAATCGATGGCATGT 59.380 45.455 3.81 0.00 36.80 3.21
4788 6389 3.067180 GTCATGGAAATCGATGGCATGTT 59.933 43.478 3.81 0.00 36.80 2.71
4789 6390 3.067040 TCATGGAAATCGATGGCATGTTG 59.933 43.478 3.81 0.00 33.61 3.33
4790 6391 1.134753 TGGAAATCGATGGCATGTTGC 59.865 47.619 3.81 0.00 44.08 4.17
4791 6392 1.469917 GAAATCGATGGCATGTTGCG 58.530 50.000 3.81 1.67 46.21 4.85
4792 6393 1.063912 GAAATCGATGGCATGTTGCGA 59.936 47.619 3.81 8.22 46.21 5.10
4793 6394 0.659427 AATCGATGGCATGTTGCGAG 59.341 50.000 3.81 0.00 46.21 5.03
4794 6395 1.162181 ATCGATGGCATGTTGCGAGG 61.162 55.000 3.81 0.00 46.21 4.63
4795 6396 2.410469 GATGGCATGTTGCGAGGC 59.590 61.111 3.81 0.00 46.21 4.70
4796 6397 3.459378 GATGGCATGTTGCGAGGCG 62.459 63.158 3.81 0.00 46.21 5.52
4811 6412 2.647297 GCGCTGAGCTTTGCCTTT 59.353 55.556 1.78 0.00 44.04 3.11
4812 6413 1.731969 GCGCTGAGCTTTGCCTTTG 60.732 57.895 1.78 0.00 44.04 2.77
4813 6414 1.951510 CGCTGAGCTTTGCCTTTGA 59.048 52.632 1.78 0.00 0.00 2.69
4814 6415 0.386478 CGCTGAGCTTTGCCTTTGAC 60.386 55.000 1.78 0.00 0.00 3.18
4815 6416 0.957362 GCTGAGCTTTGCCTTTGACT 59.043 50.000 0.00 0.00 0.00 3.41
4816 6417 1.068679 GCTGAGCTTTGCCTTTGACTC 60.069 52.381 0.00 0.00 0.00 3.36
4817 6418 2.224606 CTGAGCTTTGCCTTTGACTCA 58.775 47.619 0.00 0.00 33.42 3.41
4818 6419 2.620115 CTGAGCTTTGCCTTTGACTCAA 59.380 45.455 0.00 0.00 34.05 3.02
4819 6420 3.225104 TGAGCTTTGCCTTTGACTCAAT 58.775 40.909 0.00 0.00 31.60 2.57
4820 6421 3.005050 TGAGCTTTGCCTTTGACTCAATG 59.995 43.478 0.00 0.00 31.60 2.82
4821 6422 2.961062 AGCTTTGCCTTTGACTCAATGT 59.039 40.909 0.00 0.00 0.00 2.71
4822 6423 3.005155 AGCTTTGCCTTTGACTCAATGTC 59.995 43.478 0.00 0.00 45.54 3.06
4829 6430 3.084579 GACTCAATGTCAGGCGCG 58.915 61.111 0.00 0.00 44.73 6.86
4830 6431 1.738099 GACTCAATGTCAGGCGCGT 60.738 57.895 8.43 0.00 44.73 6.01
4831 6432 1.687494 GACTCAATGTCAGGCGCGTC 61.687 60.000 0.21 0.21 44.73 5.19
4832 6433 1.446792 CTCAATGTCAGGCGCGTCT 60.447 57.895 7.80 7.80 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.852965 CCCTCTCTCTCTCTCCCTCTT 59.147 57.143 0.00 0.00 0.00 2.85
4 5 1.421646 CTCCCTCTCTCTCTCTCCCTC 59.578 61.905 0.00 0.00 0.00 4.30
5 6 1.010793 TCTCCCTCTCTCTCTCTCCCT 59.989 57.143 0.00 0.00 0.00 4.20
6 7 1.421646 CTCTCCCTCTCTCTCTCTCCC 59.578 61.905 0.00 0.00 0.00 4.30
7 8 2.370189 CTCTCTCCCTCTCTCTCTCTCC 59.630 59.091 0.00 0.00 0.00 3.71
21 22 2.370189 CTCTCTCTCTCTCCCTCTCTCC 59.630 59.091 0.00 0.00 0.00 3.71
23 24 3.051803 TCTCTCTCTCTCTCTCCCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
29 30 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
41 42 4.163078 CCAACTCTCTCTCTCTCTCTCTCT 59.837 50.000 0.00 0.00 0.00 3.10
76 77 0.543749 CTCCTTCCCCGCAATCTCTT 59.456 55.000 0.00 0.00 0.00 2.85
140 141 6.345298 TCATGATGTCTCCGCTTTATTTACA 58.655 36.000 0.00 0.00 0.00 2.41
194 195 2.299867 GGGAAAAATTCAGCCTGAGCAA 59.700 45.455 0.00 0.00 43.56 3.91
281 282 3.408634 CTTGAACGAGGTGGTGGTTTAT 58.591 45.455 0.00 0.00 0.00 1.40
325 326 0.316841 TTCGGATTGGCTGCAAAACC 59.683 50.000 6.01 6.01 0.00 3.27
380 381 0.821517 TCTACACGCACACCCCATAG 59.178 55.000 0.00 0.00 0.00 2.23
400 471 4.684242 CACTATGAACACACGTACACACAT 59.316 41.667 0.00 0.00 0.00 3.21
490 584 4.010349 CCTTTTTCTCTATGGGACGCTTT 58.990 43.478 0.00 0.00 0.00 3.51
516 610 1.335872 GGACAATCACCGCTTGGTTTG 60.336 52.381 0.00 0.00 46.51 2.93
569 663 4.515567 GCTTGGTTAGCCATACATTACTCC 59.484 45.833 0.00 0.00 45.56 3.85
570 664 5.674933 GCTTGGTTAGCCATACATTACTC 57.325 43.478 0.00 0.00 45.56 2.59
599 693 9.825972 TTGATTGATTAAGTTTTAGCTTCTTCG 57.174 29.630 0.00 0.00 0.00 3.79
613 708 9.489393 TTTCGTTTCGATGATTGATTGATTAAG 57.511 29.630 0.00 0.00 35.23 1.85
627 722 1.591248 CGGCACTTTTCGTTTCGATG 58.409 50.000 0.00 0.00 35.23 3.84
629 724 0.530211 TCCGGCACTTTTCGTTTCGA 60.530 50.000 0.00 0.00 0.00 3.71
630 725 0.110823 CTCCGGCACTTTTCGTTTCG 60.111 55.000 0.00 0.00 0.00 3.46
631 726 1.223187 TCTCCGGCACTTTTCGTTTC 58.777 50.000 0.00 0.00 0.00 2.78
636 731 1.807142 CTCCTTTCTCCGGCACTTTTC 59.193 52.381 0.00 0.00 0.00 2.29
645 740 2.233654 CGCGCATCTCCTTTCTCCG 61.234 63.158 8.75 0.00 0.00 4.63
718 813 2.098443 GGTTTTCACTTTTCAGCGACCA 59.902 45.455 0.00 0.00 0.00 4.02
719 814 2.098443 TGGTTTTCACTTTTCAGCGACC 59.902 45.455 0.00 0.00 0.00 4.79
720 815 3.414549 TGGTTTTCACTTTTCAGCGAC 57.585 42.857 0.00 0.00 0.00 5.19
721 816 4.499019 GGATTGGTTTTCACTTTTCAGCGA 60.499 41.667 0.00 0.00 0.00 4.93
771 873 3.496884 TCCGTTTCTTCAACCATTTCGAG 59.503 43.478 0.00 0.00 30.65 4.04
863 1054 1.075600 GAGTGGGAGAGGGAGAGGG 60.076 68.421 0.00 0.00 0.00 4.30
864 1055 1.075600 GGAGTGGGAGAGGGAGAGG 60.076 68.421 0.00 0.00 0.00 3.69
865 1056 0.686112 GTGGAGTGGGAGAGGGAGAG 60.686 65.000 0.00 0.00 0.00 3.20
866 1057 1.388531 GTGGAGTGGGAGAGGGAGA 59.611 63.158 0.00 0.00 0.00 3.71
867 1058 2.055042 CGTGGAGTGGGAGAGGGAG 61.055 68.421 0.00 0.00 0.00 4.30
868 1059 2.037367 CGTGGAGTGGGAGAGGGA 59.963 66.667 0.00 0.00 0.00 4.20
958 1149 0.254178 GGATGGGATGTGTGCAGTCT 59.746 55.000 0.00 0.00 0.00 3.24
959 1150 0.749454 GGGATGGGATGTGTGCAGTC 60.749 60.000 0.00 0.00 0.00 3.51
960 1151 1.304282 GGGATGGGATGTGTGCAGT 59.696 57.895 0.00 0.00 0.00 4.40
961 1152 0.106369 ATGGGATGGGATGTGTGCAG 60.106 55.000 0.00 0.00 0.00 4.41
962 1153 0.106569 GATGGGATGGGATGTGTGCA 60.107 55.000 0.00 0.00 0.00 4.57
963 1154 0.825010 GGATGGGATGGGATGTGTGC 60.825 60.000 0.00 0.00 0.00 4.57
965 1156 1.839191 CGGATGGGATGGGATGTGT 59.161 57.895 0.00 0.00 0.00 3.72
1146 1345 1.472728 GCCGAAGTTGATGGGTACGAT 60.473 52.381 0.00 0.00 0.00 3.73
1151 1350 1.303317 GGTGCCGAAGTTGATGGGT 60.303 57.895 0.00 0.00 0.00 4.51
1240 1440 0.746659 GCGGATGGGAAATTCAAGGG 59.253 55.000 0.00 0.00 0.00 3.95
1243 1443 1.091537 GACGCGGATGGGAAATTCAA 58.908 50.000 12.47 0.00 0.00 2.69
1284 1488 2.742053 TCGTGAAATTAGAGGCAAGCAC 59.258 45.455 0.00 0.00 0.00 4.40
1376 1585 1.342819 GATAGAGGCATGGAAGCGAGT 59.657 52.381 0.00 0.00 34.64 4.18
1377 1586 1.668337 CGATAGAGGCATGGAAGCGAG 60.668 57.143 0.00 0.00 39.76 5.03
1417 1631 0.317436 CGACAGCTACATCTCTCCGC 60.317 60.000 0.00 0.00 0.00 5.54
1513 1732 9.275231 CATACTACCGTATACTCGAATGATTTC 57.725 37.037 0.56 0.00 34.63 2.17
1532 2629 3.933332 AGCTGCGGAAAAACTCATACTAC 59.067 43.478 0.00 0.00 0.00 2.73
1533 2630 4.181578 GAGCTGCGGAAAAACTCATACTA 58.818 43.478 0.00 0.00 0.00 1.82
1534 2631 3.003480 GAGCTGCGGAAAAACTCATACT 58.997 45.455 0.00 0.00 0.00 2.12
1607 2704 1.565390 TTGGGTAGCAGCAGAGGCAT 61.565 55.000 0.00 0.00 44.61 4.40
1609 2706 0.817229 GATTGGGTAGCAGCAGAGGC 60.817 60.000 0.00 0.00 41.61 4.70
1614 2711 4.662278 ACTAAAAAGATTGGGTAGCAGCA 58.338 39.130 0.00 0.00 0.00 4.41
1639 2736 2.227388 CTGCAAGTGGCCTAAAGTCAAG 59.773 50.000 3.32 0.00 43.89 3.02
1671 2768 3.279434 GTGGATGTGGGGAAAGTATGAC 58.721 50.000 0.00 0.00 0.00 3.06
1677 2784 2.162681 GAAGTGTGGATGTGGGGAAAG 58.837 52.381 0.00 0.00 0.00 2.62
1734 2841 7.014615 AGGTTTAGGAGAAGACGTAAACTAACA 59.985 37.037 17.16 0.00 43.90 2.41
1739 2846 4.855937 CGAGGTTTAGGAGAAGACGTAAAC 59.144 45.833 0.00 0.00 43.80 2.01
1751 2858 9.729281 AAATCTTTGTATTTACGAGGTTTAGGA 57.271 29.630 0.00 0.00 29.40 2.94
1772 2879 4.837093 TTCCTACACCGAATCCAAATCT 57.163 40.909 0.00 0.00 0.00 2.40
1812 2919 2.450609 AAGCACTACCACCGTGTTAG 57.549 50.000 1.75 1.75 34.91 2.34
1813 2920 2.485903 CAAAGCACTACCACCGTGTTA 58.514 47.619 0.00 0.00 34.91 2.41
1814 2921 1.305201 CAAAGCACTACCACCGTGTT 58.695 50.000 0.00 0.00 34.91 3.32
1815 2922 1.164041 GCAAAGCACTACCACCGTGT 61.164 55.000 0.00 0.00 34.91 4.49
1816 2923 0.884704 AGCAAAGCACTACCACCGTG 60.885 55.000 0.00 0.00 35.53 4.94
1817 2924 0.682852 TAGCAAAGCACTACCACCGT 59.317 50.000 0.00 0.00 0.00 4.83
1818 2925 1.337823 ACTAGCAAAGCACTACCACCG 60.338 52.381 0.00 0.00 0.00 4.94
1819 2926 2.474410 ACTAGCAAAGCACTACCACC 57.526 50.000 0.00 0.00 0.00 4.61
1820 2927 2.412089 CGAACTAGCAAAGCACTACCAC 59.588 50.000 0.00 0.00 0.00 4.16
1821 2928 2.036733 ACGAACTAGCAAAGCACTACCA 59.963 45.455 0.00 0.00 0.00 3.25
1822 2929 2.685100 ACGAACTAGCAAAGCACTACC 58.315 47.619 0.00 0.00 0.00 3.18
1823 2930 3.858238 CCTACGAACTAGCAAAGCACTAC 59.142 47.826 0.00 0.00 0.00 2.73
1824 2931 3.508793 ACCTACGAACTAGCAAAGCACTA 59.491 43.478 0.00 0.00 0.00 2.74
1825 2932 2.299297 ACCTACGAACTAGCAAAGCACT 59.701 45.455 0.00 0.00 0.00 4.40
1831 2938 4.081406 TCAAGGTACCTACGAACTAGCAA 58.919 43.478 16.67 0.00 0.00 3.91
1856 2963 5.266733 TGGGATTTGCTGCAAGATTAATC 57.733 39.130 15.39 14.06 34.07 1.75
1880 2987 3.849911 TCACACTGTATACTGCTTGAGC 58.150 45.455 9.48 0.00 42.50 4.26
1993 3100 3.126323 AGTACTACCAGGTTTAGGGGG 57.874 52.381 0.00 0.00 0.00 5.40
1994 3101 6.819947 ATTTAGTACTACCAGGTTTAGGGG 57.180 41.667 0.91 0.00 0.00 4.79
1999 3106 8.608598 ACCATTGTATTTAGTACTACCAGGTTT 58.391 33.333 0.91 0.00 34.27 3.27
2000 3107 8.154420 ACCATTGTATTTAGTACTACCAGGTT 57.846 34.615 0.91 0.00 34.27 3.50
2002 3109 8.889717 CAAACCATTGTATTTAGTACTACCAGG 58.110 37.037 0.91 0.00 34.27 4.45
2003 3110 8.889717 CCAAACCATTGTATTTAGTACTACCAG 58.110 37.037 0.91 0.00 34.60 4.00
2004 3111 8.604184 TCCAAACCATTGTATTTAGTACTACCA 58.396 33.333 0.91 0.00 34.60 3.25
2040 3147 3.259123 GGCACATCCAGATCCAAGTTTTT 59.741 43.478 0.00 0.00 34.01 1.94
2041 3148 2.827921 GGCACATCCAGATCCAAGTTTT 59.172 45.455 0.00 0.00 34.01 2.43
2042 3149 2.450476 GGCACATCCAGATCCAAGTTT 58.550 47.619 0.00 0.00 34.01 2.66
2045 3152 0.549950 AGGGCACATCCAGATCCAAG 59.450 55.000 0.00 0.00 36.21 3.61
2046 3153 1.002069 AAGGGCACATCCAGATCCAA 58.998 50.000 0.00 0.00 36.21 3.53
2104 3214 7.235812 AGGATAGGAATGACCAACCTATAAGAC 59.764 40.741 14.40 8.80 44.05 3.01
2116 3226 5.995446 AGAAGTCAAAGGATAGGAATGACC 58.005 41.667 0.00 0.00 40.92 4.02
2138 3293 7.477144 TGTATGGCGTGTATTGATAAGAAAG 57.523 36.000 0.00 0.00 0.00 2.62
2155 3310 5.972107 AGCAAATCTAATGGATGTATGGC 57.028 39.130 0.00 0.00 34.45 4.40
2165 3320 4.339247 CCCTACCACCAAGCAAATCTAATG 59.661 45.833 0.00 0.00 0.00 1.90
2180 3335 1.648116 TACCACACCTTCCCTACCAC 58.352 55.000 0.00 0.00 0.00 4.16
2212 3367 1.335597 GCTTCTTGCAAACCGTAACCC 60.336 52.381 0.00 0.00 42.31 4.11
2213 3368 2.046283 GCTTCTTGCAAACCGTAACC 57.954 50.000 0.00 0.00 42.31 2.85
2247 3402 1.160137 AGTTTGCTGAACGCCTCATC 58.840 50.000 0.00 0.00 43.20 2.92
2318 3508 6.088016 TCTGCTTTATGTTTTGCTGTCAAT 57.912 33.333 0.00 0.00 31.33 2.57
2342 3532 3.276857 CTGAATGCAGGCTACATCTTGT 58.723 45.455 0.00 0.00 38.51 3.16
2346 3536 3.134458 GGTACTGAATGCAGGCTACATC 58.866 50.000 5.47 0.00 46.60 3.06
2395 3585 2.863153 CTGTAGTGGCTGCGCAAC 59.137 61.111 13.05 6.98 31.62 4.17
2396 3586 3.049674 GCTGTAGTGGCTGCGCAA 61.050 61.111 13.05 0.00 0.00 4.85
2398 3588 3.494336 CTGCTGTAGTGGCTGCGC 61.494 66.667 0.00 0.00 36.33 6.09
2431 3622 9.709495 AAATATGACTTATGCATGTTTTTGTGT 57.291 25.926 10.16 0.00 34.70 3.72
2492 3685 7.502226 TCTCTAAAAACAGAAACCACATGTCAT 59.498 33.333 0.00 0.00 0.00 3.06
2550 3753 1.138069 TGCAGAGAACAACACGAGGAA 59.862 47.619 0.00 0.00 0.00 3.36
2553 3756 0.510359 GCTGCAGAGAACAACACGAG 59.490 55.000 20.43 0.00 0.00 4.18
2556 3759 0.536006 AGGGCTGCAGAGAACAACAC 60.536 55.000 20.43 0.00 0.00 3.32
2610 3813 4.082895 GGTAGCATCATACCGAAGACGTAT 60.083 45.833 0.00 0.00 36.14 3.06
2660 3863 9.042450 TGACCCTTTATAGTTCTGTTTATGAGA 57.958 33.333 0.00 0.00 0.00 3.27
2775 4021 9.457436 AAACTGTTCCTTTGTTTCTAGTAAAGA 57.543 29.630 0.00 0.00 34.23 2.52
2936 4516 6.604396 TCATCTTCAAACATACGAGGGTAGTA 59.396 38.462 0.00 0.00 30.81 1.82
2978 4573 2.993899 CGACTAAGCTTGTGGTTGGTAG 59.006 50.000 9.86 0.00 43.56 3.18
3004 4599 6.539173 ACCTTACCATAACTCATGTGTTTGA 58.461 36.000 17.51 2.29 32.21 2.69
3184 4783 7.063544 AGCACGTGATTCTAATACAAAGAGAAC 59.936 37.037 22.23 0.00 32.25 3.01
3192 4791 6.943981 GCAAATAGCACGTGATTCTAATACA 58.056 36.000 22.23 0.00 44.79 2.29
3645 5244 1.291877 GACGAACGAGCACCAGCAAT 61.292 55.000 0.14 0.00 45.49 3.56
3648 5247 3.470567 CGACGAACGAGCACCAGC 61.471 66.667 0.14 0.00 45.77 4.85
3653 5252 0.454789 TATTTCGCGACGAACGAGCA 60.455 50.000 9.15 0.00 45.64 4.26
3772 5371 6.024049 GGAACGCTCATTTCAGTAAAAGATG 58.976 40.000 0.00 0.00 0.00 2.90
3778 5378 4.570772 GCATAGGAACGCTCATTTCAGTAA 59.429 41.667 0.00 0.00 0.00 2.24
3857 5458 2.005451 ACAGATCATCGAAGCAACAGC 58.995 47.619 0.00 0.00 0.00 4.40
4273 5874 4.035208 GCCGTTGAAACTGTCCAATATAGG 59.965 45.833 0.15 0.00 0.00 2.57
4284 5885 1.660333 GCTCTTTCGCCGTTGAAACTG 60.660 52.381 0.00 0.00 34.34 3.16
4297 5898 2.089980 ACATGCTGGATGTGCTCTTTC 58.910 47.619 14.25 0.00 44.12 2.62
4308 5909 5.744171 ACAAATATCACTACACATGCTGGA 58.256 37.500 0.00 0.00 0.00 3.86
4310 5911 5.585844 TGGACAAATATCACTACACATGCTG 59.414 40.000 0.00 0.00 0.00 4.41
4347 5948 4.371624 TCCTCTGAACAATGACACCATT 57.628 40.909 0.00 0.00 43.37 3.16
4380 5981 2.036256 GCCAGGCTTGTGGGACAT 59.964 61.111 3.29 0.00 44.52 3.06
4440 6041 0.670162 CAACAAACTGCACCAGGGAG 59.330 55.000 0.00 0.00 41.43 4.30
4478 6079 1.262151 GCTAAACACCTTCGCGTTGAA 59.738 47.619 5.77 0.00 34.74 2.69
4479 6080 0.863144 GCTAAACACCTTCGCGTTGA 59.137 50.000 5.77 0.00 0.00 3.18
4480 6081 0.865769 AGCTAAACACCTTCGCGTTG 59.134 50.000 5.77 1.93 0.00 4.10
4481 6082 1.589803 AAGCTAAACACCTTCGCGTT 58.410 45.000 5.77 0.00 0.00 4.84
4482 6083 1.263217 CAAAGCTAAACACCTTCGCGT 59.737 47.619 5.77 0.00 0.00 6.01
4483 6084 1.263217 ACAAAGCTAAACACCTTCGCG 59.737 47.619 0.00 0.00 0.00 5.87
4484 6085 2.032924 ACACAAAGCTAAACACCTTCGC 59.967 45.455 0.00 0.00 0.00 4.70
4485 6086 3.963383 ACACAAAGCTAAACACCTTCG 57.037 42.857 0.00 0.00 0.00 3.79
4486 6087 3.796717 GCAACACAAAGCTAAACACCTTC 59.203 43.478 0.00 0.00 0.00 3.46
4487 6088 3.447229 AGCAACACAAAGCTAAACACCTT 59.553 39.130 0.00 0.00 39.78 3.50
4488 6089 3.023832 AGCAACACAAAGCTAAACACCT 58.976 40.909 0.00 0.00 39.78 4.00
4489 6090 3.436700 AGCAACACAAAGCTAAACACC 57.563 42.857 0.00 0.00 39.78 4.16
4490 6091 5.102313 AGAAAGCAACACAAAGCTAAACAC 58.898 37.500 0.00 0.00 40.90 3.32
4491 6092 5.323371 AGAAAGCAACACAAAGCTAAACA 57.677 34.783 0.00 0.00 40.90 2.83
4492 6093 6.647212 AAAGAAAGCAACACAAAGCTAAAC 57.353 33.333 0.00 0.00 40.90 2.01
4493 6094 8.940768 ATTAAAGAAAGCAACACAAAGCTAAA 57.059 26.923 0.00 0.00 40.90 1.85
4494 6095 8.816144 CAATTAAAGAAAGCAACACAAAGCTAA 58.184 29.630 0.00 0.00 40.90 3.09
4495 6096 7.978975 ACAATTAAAGAAAGCAACACAAAGCTA 59.021 29.630 0.00 0.00 40.90 3.32
4496 6097 6.818142 ACAATTAAAGAAAGCAACACAAAGCT 59.182 30.769 0.00 0.00 44.31 3.74
4497 6098 7.003939 ACAATTAAAGAAAGCAACACAAAGC 57.996 32.000 0.00 0.00 0.00 3.51
4500 6101 9.646427 ACTAAACAATTAAAGAAAGCAACACAA 57.354 25.926 0.00 0.00 0.00 3.33
4535 6136 6.899393 AGAAACTGGTCTATGCATGAAAAA 57.101 33.333 10.16 0.00 0.00 1.94
4536 6137 6.899393 AAGAAACTGGTCTATGCATGAAAA 57.101 33.333 10.16 0.00 0.00 2.29
4537 6138 6.489700 TGAAAGAAACTGGTCTATGCATGAAA 59.510 34.615 10.16 0.00 0.00 2.69
4538 6139 6.003326 TGAAAGAAACTGGTCTATGCATGAA 58.997 36.000 10.16 0.00 0.00 2.57
4539 6140 5.559770 TGAAAGAAACTGGTCTATGCATGA 58.440 37.500 10.16 1.87 0.00 3.07
4540 6141 5.885230 TGAAAGAAACTGGTCTATGCATG 57.115 39.130 10.16 0.00 0.00 4.06
4541 6142 7.472334 AAATGAAAGAAACTGGTCTATGCAT 57.528 32.000 3.79 3.79 0.00 3.96
4542 6143 6.899393 AAATGAAAGAAACTGGTCTATGCA 57.101 33.333 0.00 0.00 0.00 3.96
4543 6144 8.515414 ACTTAAATGAAAGAAACTGGTCTATGC 58.485 33.333 0.00 0.00 0.00 3.14
4544 6145 9.831737 CACTTAAATGAAAGAAACTGGTCTATG 57.168 33.333 0.00 0.00 0.00 2.23
4545 6146 9.574516 ACACTTAAATGAAAGAAACTGGTCTAT 57.425 29.630 0.00 0.00 0.00 1.98
4546 6147 8.974060 ACACTTAAATGAAAGAAACTGGTCTA 57.026 30.769 0.00 0.00 0.00 2.59
4547 6148 7.881775 ACACTTAAATGAAAGAAACTGGTCT 57.118 32.000 0.00 0.00 0.00 3.85
4548 6149 8.926715 AAACACTTAAATGAAAGAAACTGGTC 57.073 30.769 0.00 0.00 0.00 4.02
4549 6150 9.150348 CAAAACACTTAAATGAAAGAAACTGGT 57.850 29.630 0.00 0.00 0.00 4.00
4550 6151 8.116136 GCAAAACACTTAAATGAAAGAAACTGG 58.884 33.333 0.00 0.00 0.00 4.00
4551 6152 8.655092 TGCAAAACACTTAAATGAAAGAAACTG 58.345 29.630 0.00 0.00 0.00 3.16
4552 6153 8.770438 TGCAAAACACTTAAATGAAAGAAACT 57.230 26.923 0.00 0.00 0.00 2.66
4558 6159 9.638239 GGATCTATGCAAAACACTTAAATGAAA 57.362 29.630 0.00 0.00 0.00 2.69
4559 6160 8.801299 TGGATCTATGCAAAACACTTAAATGAA 58.199 29.630 0.00 0.00 0.00 2.57
4560 6161 8.243426 GTGGATCTATGCAAAACACTTAAATGA 58.757 33.333 0.00 0.00 0.00 2.57
4561 6162 7.218773 CGTGGATCTATGCAAAACACTTAAATG 59.781 37.037 0.00 0.00 0.00 2.32
4562 6163 7.094377 ACGTGGATCTATGCAAAACACTTAAAT 60.094 33.333 0.00 0.00 0.00 1.40
4563 6164 6.205853 ACGTGGATCTATGCAAAACACTTAAA 59.794 34.615 0.00 0.00 0.00 1.52
4564 6165 5.703592 ACGTGGATCTATGCAAAACACTTAA 59.296 36.000 0.00 0.00 0.00 1.85
4565 6166 5.121611 CACGTGGATCTATGCAAAACACTTA 59.878 40.000 7.95 0.00 0.00 2.24
4566 6167 4.072131 ACGTGGATCTATGCAAAACACTT 58.928 39.130 0.00 0.00 0.00 3.16
4567 6168 3.436704 CACGTGGATCTATGCAAAACACT 59.563 43.478 7.95 0.00 0.00 3.55
4568 6169 3.435327 TCACGTGGATCTATGCAAAACAC 59.565 43.478 17.00 0.00 0.00 3.32
4569 6170 3.435327 GTCACGTGGATCTATGCAAAACA 59.565 43.478 17.00 0.00 0.00 2.83
4570 6171 3.684788 AGTCACGTGGATCTATGCAAAAC 59.315 43.478 17.00 1.16 0.00 2.43
4571 6172 3.937814 AGTCACGTGGATCTATGCAAAA 58.062 40.909 17.00 0.00 0.00 2.44
4572 6173 3.610040 AGTCACGTGGATCTATGCAAA 57.390 42.857 17.00 0.00 0.00 3.68
4573 6174 3.490933 GCTAGTCACGTGGATCTATGCAA 60.491 47.826 17.00 0.00 0.00 4.08
4574 6175 2.034685 GCTAGTCACGTGGATCTATGCA 59.965 50.000 17.00 0.00 0.00 3.96
4575 6176 2.034685 TGCTAGTCACGTGGATCTATGC 59.965 50.000 17.00 17.75 0.00 3.14
4576 6177 3.633235 GTGCTAGTCACGTGGATCTATG 58.367 50.000 17.00 10.54 35.76 2.23
4577 6178 3.992260 GTGCTAGTCACGTGGATCTAT 57.008 47.619 17.00 0.00 35.76 1.98
4587 6188 6.092807 CCCAAGAAAGAAATAGTGCTAGTCAC 59.907 42.308 8.67 8.67 45.98 3.67
4588 6189 6.173339 CCCAAGAAAGAAATAGTGCTAGTCA 58.827 40.000 0.00 0.00 0.00 3.41
4589 6190 6.174049 ACCCAAGAAAGAAATAGTGCTAGTC 58.826 40.000 0.00 0.00 0.00 2.59
4590 6191 6.128138 ACCCAAGAAAGAAATAGTGCTAGT 57.872 37.500 0.00 0.00 0.00 2.57
4591 6192 6.173339 TGACCCAAGAAAGAAATAGTGCTAG 58.827 40.000 0.00 0.00 0.00 3.42
4592 6193 6.121776 TGACCCAAGAAAGAAATAGTGCTA 57.878 37.500 0.00 0.00 0.00 3.49
4593 6194 4.985538 TGACCCAAGAAAGAAATAGTGCT 58.014 39.130 0.00 0.00 0.00 4.40
4594 6195 5.415701 TGATGACCCAAGAAAGAAATAGTGC 59.584 40.000 0.00 0.00 0.00 4.40
4595 6196 7.452880 TTGATGACCCAAGAAAGAAATAGTG 57.547 36.000 0.00 0.00 0.00 2.74
4596 6197 7.725844 AGTTTGATGACCCAAGAAAGAAATAGT 59.274 33.333 0.00 0.00 0.00 2.12
4597 6198 8.115490 AGTTTGATGACCCAAGAAAGAAATAG 57.885 34.615 0.00 0.00 0.00 1.73
4598 6199 7.176690 GGAGTTTGATGACCCAAGAAAGAAATA 59.823 37.037 0.00 0.00 0.00 1.40
4599 6200 6.015095 GGAGTTTGATGACCCAAGAAAGAAAT 60.015 38.462 0.00 0.00 0.00 2.17
4600 6201 5.301805 GGAGTTTGATGACCCAAGAAAGAAA 59.698 40.000 0.00 0.00 0.00 2.52
4601 6202 4.827284 GGAGTTTGATGACCCAAGAAAGAA 59.173 41.667 0.00 0.00 0.00 2.52
4602 6203 4.104738 AGGAGTTTGATGACCCAAGAAAGA 59.895 41.667 0.00 0.00 0.00 2.52
4603 6204 4.401925 AGGAGTTTGATGACCCAAGAAAG 58.598 43.478 0.00 0.00 0.00 2.62
4604 6205 4.104738 AGAGGAGTTTGATGACCCAAGAAA 59.895 41.667 0.00 0.00 0.00 2.52
4605 6206 3.652869 AGAGGAGTTTGATGACCCAAGAA 59.347 43.478 0.00 0.00 0.00 2.52
4606 6207 3.251484 AGAGGAGTTTGATGACCCAAGA 58.749 45.455 0.00 0.00 0.00 3.02
4607 6208 3.604582 GAGAGGAGTTTGATGACCCAAG 58.395 50.000 0.00 0.00 0.00 3.61
4608 6209 2.305927 GGAGAGGAGTTTGATGACCCAA 59.694 50.000 0.00 0.00 0.00 4.12
4609 6210 1.909302 GGAGAGGAGTTTGATGACCCA 59.091 52.381 0.00 0.00 0.00 4.51
4610 6211 2.192263 AGGAGAGGAGTTTGATGACCC 58.808 52.381 0.00 0.00 0.00 4.46
4611 6212 3.517500 AGAAGGAGAGGAGTTTGATGACC 59.482 47.826 0.00 0.00 0.00 4.02
4612 6213 4.466015 AGAGAAGGAGAGGAGTTTGATGAC 59.534 45.833 0.00 0.00 0.00 3.06
4613 6214 4.682563 AGAGAAGGAGAGGAGTTTGATGA 58.317 43.478 0.00 0.00 0.00 2.92
4614 6215 5.419239 AAGAGAAGGAGAGGAGTTTGATG 57.581 43.478 0.00 0.00 0.00 3.07
4615 6216 7.747809 ATTAAGAGAAGGAGAGGAGTTTGAT 57.252 36.000 0.00 0.00 0.00 2.57
4616 6217 7.560796 AATTAAGAGAAGGAGAGGAGTTTGA 57.439 36.000 0.00 0.00 0.00 2.69
4617 6218 9.541143 GATAATTAAGAGAAGGAGAGGAGTTTG 57.459 37.037 0.00 0.00 0.00 2.93
4618 6219 9.500701 AGATAATTAAGAGAAGGAGAGGAGTTT 57.499 33.333 0.00 0.00 0.00 2.66
4619 6220 9.500701 AAGATAATTAAGAGAAGGAGAGGAGTT 57.499 33.333 0.00 0.00 0.00 3.01
4620 6221 8.923270 CAAGATAATTAAGAGAAGGAGAGGAGT 58.077 37.037 0.00 0.00 0.00 3.85
4621 6222 8.923270 ACAAGATAATTAAGAGAAGGAGAGGAG 58.077 37.037 0.00 0.00 0.00 3.69
4622 6223 8.846423 ACAAGATAATTAAGAGAAGGAGAGGA 57.154 34.615 0.00 0.00 0.00 3.71
4649 6250 9.793259 TCAACTAGGTAAAAGAAAATCTGATGT 57.207 29.630 0.00 0.00 0.00 3.06
4651 6252 9.793259 TGTCAACTAGGTAAAAGAAAATCTGAT 57.207 29.630 0.00 0.00 0.00 2.90
4652 6253 9.273016 CTGTCAACTAGGTAAAAGAAAATCTGA 57.727 33.333 0.00 0.00 0.00 3.27
4653 6254 8.017946 GCTGTCAACTAGGTAAAAGAAAATCTG 58.982 37.037 0.00 0.00 0.00 2.90
4654 6255 7.939588 AGCTGTCAACTAGGTAAAAGAAAATCT 59.060 33.333 0.00 0.00 0.00 2.40
4655 6256 8.100508 AGCTGTCAACTAGGTAAAAGAAAATC 57.899 34.615 0.00 0.00 0.00 2.17
4656 6257 8.465273 AAGCTGTCAACTAGGTAAAAGAAAAT 57.535 30.769 0.00 0.00 0.00 1.82
4657 6258 7.875327 AAGCTGTCAACTAGGTAAAAGAAAA 57.125 32.000 0.00 0.00 0.00 2.29
4658 6259 7.875327 AAAGCTGTCAACTAGGTAAAAGAAA 57.125 32.000 0.00 0.00 0.00 2.52
4659 6260 7.172703 GCTAAAGCTGTCAACTAGGTAAAAGAA 59.827 37.037 0.00 0.00 38.21 2.52
4660 6261 6.649557 GCTAAAGCTGTCAACTAGGTAAAAGA 59.350 38.462 0.00 0.00 38.21 2.52
4661 6262 6.426937 TGCTAAAGCTGTCAACTAGGTAAAAG 59.573 38.462 3.26 0.00 42.66 2.27
4662 6263 6.204108 GTGCTAAAGCTGTCAACTAGGTAAAA 59.796 38.462 3.26 0.00 42.66 1.52
4663 6264 5.699458 GTGCTAAAGCTGTCAACTAGGTAAA 59.301 40.000 3.26 0.00 42.66 2.01
4664 6265 5.221561 TGTGCTAAAGCTGTCAACTAGGTAA 60.222 40.000 3.26 0.00 42.66 2.85
4665 6266 4.282449 TGTGCTAAAGCTGTCAACTAGGTA 59.718 41.667 3.26 0.00 42.66 3.08
4666 6267 3.071023 TGTGCTAAAGCTGTCAACTAGGT 59.929 43.478 3.26 0.00 42.66 3.08
4667 6268 3.664107 TGTGCTAAAGCTGTCAACTAGG 58.336 45.455 3.26 0.00 42.66 3.02
4668 6269 4.692625 ACATGTGCTAAAGCTGTCAACTAG 59.307 41.667 0.00 0.00 42.66 2.57
4669 6270 4.641396 ACATGTGCTAAAGCTGTCAACTA 58.359 39.130 0.00 0.00 42.66 2.24
4670 6271 3.480470 ACATGTGCTAAAGCTGTCAACT 58.520 40.909 0.00 0.00 42.66 3.16
4671 6272 3.904136 ACATGTGCTAAAGCTGTCAAC 57.096 42.857 0.00 0.00 42.66 3.18
4672 6273 5.244755 TCATACATGTGCTAAAGCTGTCAA 58.755 37.500 9.11 0.00 42.66 3.18
4673 6274 4.831107 TCATACATGTGCTAAAGCTGTCA 58.169 39.130 9.11 1.20 42.66 3.58
4674 6275 4.272018 CCTCATACATGTGCTAAAGCTGTC 59.728 45.833 9.11 0.00 42.66 3.51
4675 6276 4.194640 CCTCATACATGTGCTAAAGCTGT 58.805 43.478 9.11 2.34 42.66 4.40
4676 6277 4.034858 CACCTCATACATGTGCTAAAGCTG 59.965 45.833 9.11 0.00 42.66 4.24
4677 6278 4.194640 CACCTCATACATGTGCTAAAGCT 58.805 43.478 9.11 0.00 42.66 3.74
4678 6279 3.313526 CCACCTCATACATGTGCTAAAGC 59.686 47.826 9.11 0.00 42.50 3.51
4679 6280 4.769688 TCCACCTCATACATGTGCTAAAG 58.230 43.478 9.11 0.00 0.00 1.85
4680 6281 4.769688 CTCCACCTCATACATGTGCTAAA 58.230 43.478 9.11 0.00 0.00 1.85
4681 6282 3.432186 GCTCCACCTCATACATGTGCTAA 60.432 47.826 9.11 0.00 0.00 3.09
4682 6283 2.103094 GCTCCACCTCATACATGTGCTA 59.897 50.000 9.11 0.00 0.00 3.49
4683 6284 1.134280 GCTCCACCTCATACATGTGCT 60.134 52.381 9.11 0.00 0.00 4.40
4684 6285 1.303309 GCTCCACCTCATACATGTGC 58.697 55.000 9.11 0.00 0.00 4.57
4685 6286 2.093288 AGTGCTCCACCTCATACATGTG 60.093 50.000 9.11 0.00 34.49 3.21
4686 6287 2.191400 AGTGCTCCACCTCATACATGT 58.809 47.619 2.69 2.69 34.49 3.21
4687 6288 2.996249 AGTGCTCCACCTCATACATG 57.004 50.000 0.00 0.00 34.49 3.21
4688 6289 3.916035 TCTAGTGCTCCACCTCATACAT 58.084 45.455 0.00 0.00 34.49 2.29
4689 6290 3.382083 TCTAGTGCTCCACCTCATACA 57.618 47.619 0.00 0.00 34.49 2.29
4690 6291 3.068873 CCTTCTAGTGCTCCACCTCATAC 59.931 52.174 0.00 0.00 34.49 2.39
4691 6292 3.300388 CCTTCTAGTGCTCCACCTCATA 58.700 50.000 0.00 0.00 34.49 2.15
4692 6293 2.114616 CCTTCTAGTGCTCCACCTCAT 58.885 52.381 0.00 0.00 34.49 2.90
4693 6294 1.203187 ACCTTCTAGTGCTCCACCTCA 60.203 52.381 0.00 0.00 34.49 3.86
4694 6295 1.478916 GACCTTCTAGTGCTCCACCTC 59.521 57.143 0.00 0.00 34.49 3.85
4695 6296 1.077993 AGACCTTCTAGTGCTCCACCT 59.922 52.381 0.00 0.00 34.49 4.00
4696 6297 1.478916 GAGACCTTCTAGTGCTCCACC 59.521 57.143 0.00 0.00 34.49 4.61
4697 6298 2.171840 TGAGACCTTCTAGTGCTCCAC 58.828 52.381 0.00 0.00 34.10 4.02
4698 6299 2.604912 TGAGACCTTCTAGTGCTCCA 57.395 50.000 0.00 0.00 0.00 3.86
4699 6300 2.102252 CCATGAGACCTTCTAGTGCTCC 59.898 54.545 0.00 0.00 0.00 4.70
4700 6301 2.102252 CCCATGAGACCTTCTAGTGCTC 59.898 54.545 0.00 0.00 0.00 4.26
4701 6302 2.114616 CCCATGAGACCTTCTAGTGCT 58.885 52.381 0.00 0.00 0.00 4.40
4702 6303 1.474143 GCCCATGAGACCTTCTAGTGC 60.474 57.143 0.00 0.00 0.00 4.40
4703 6304 2.102252 GAGCCCATGAGACCTTCTAGTG 59.898 54.545 0.00 0.00 0.00 2.74
4704 6305 2.023501 AGAGCCCATGAGACCTTCTAGT 60.024 50.000 0.00 0.00 0.00 2.57
4705 6306 2.676748 AGAGCCCATGAGACCTTCTAG 58.323 52.381 0.00 0.00 0.00 2.43
4706 6307 2.856760 AGAGCCCATGAGACCTTCTA 57.143 50.000 0.00 0.00 0.00 2.10
4707 6308 1.836802 GAAGAGCCCATGAGACCTTCT 59.163 52.381 0.00 0.00 0.00 2.85
4708 6309 1.556911 TGAAGAGCCCATGAGACCTTC 59.443 52.381 0.00 2.84 0.00 3.46
4709 6310 1.558756 CTGAAGAGCCCATGAGACCTT 59.441 52.381 0.00 0.00 0.00 3.50
4710 6311 1.202330 CTGAAGAGCCCATGAGACCT 58.798 55.000 0.00 0.00 0.00 3.85
4711 6312 1.198713 TCTGAAGAGCCCATGAGACC 58.801 55.000 0.00 0.00 0.00 3.85
4712 6313 2.170187 ACATCTGAAGAGCCCATGAGAC 59.830 50.000 0.00 0.00 0.00 3.36
4713 6314 2.169978 CACATCTGAAGAGCCCATGAGA 59.830 50.000 0.00 0.00 0.00 3.27
4714 6315 2.562635 CACATCTGAAGAGCCCATGAG 58.437 52.381 0.00 0.00 0.00 2.90
4715 6316 1.211212 CCACATCTGAAGAGCCCATGA 59.789 52.381 0.00 0.00 0.00 3.07
4716 6317 1.064906 ACCACATCTGAAGAGCCCATG 60.065 52.381 0.00 0.00 0.00 3.66
4717 6318 1.293062 ACCACATCTGAAGAGCCCAT 58.707 50.000 0.00 0.00 0.00 4.00
4718 6319 1.067295 AACCACATCTGAAGAGCCCA 58.933 50.000 0.00 0.00 0.00 5.36
4719 6320 1.271597 ACAACCACATCTGAAGAGCCC 60.272 52.381 0.00 0.00 0.00 5.19
4720 6321 2.191128 ACAACCACATCTGAAGAGCC 57.809 50.000 0.00 0.00 0.00 4.70
4721 6322 2.351157 GCAACAACCACATCTGAAGAGC 60.351 50.000 0.00 0.00 0.00 4.09
4722 6323 3.058432 CAGCAACAACCACATCTGAAGAG 60.058 47.826 0.00 0.00 0.00 2.85
4723 6324 2.880268 CAGCAACAACCACATCTGAAGA 59.120 45.455 0.00 0.00 0.00 2.87
4724 6325 2.606308 GCAGCAACAACCACATCTGAAG 60.606 50.000 0.00 0.00 0.00 3.02
4725 6326 1.337703 GCAGCAACAACCACATCTGAA 59.662 47.619 0.00 0.00 0.00 3.02
4726 6327 0.953727 GCAGCAACAACCACATCTGA 59.046 50.000 0.00 0.00 0.00 3.27
4727 6328 0.956633 AGCAGCAACAACCACATCTG 59.043 50.000 0.00 0.00 0.00 2.90
4728 6329 2.430465 CTAGCAGCAACAACCACATCT 58.570 47.619 0.00 0.00 0.00 2.90
4729 6330 1.470098 CCTAGCAGCAACAACCACATC 59.530 52.381 0.00 0.00 0.00 3.06
4730 6331 1.538047 CCTAGCAGCAACAACCACAT 58.462 50.000 0.00 0.00 0.00 3.21
4731 6332 1.172180 GCCTAGCAGCAACAACCACA 61.172 55.000 0.00 0.00 0.00 4.17
4732 6333 1.172180 TGCCTAGCAGCAACAACCAC 61.172 55.000 0.00 0.00 40.56 4.16
4733 6334 1.150308 TGCCTAGCAGCAACAACCA 59.850 52.632 0.00 0.00 40.56 3.67
4734 6335 4.079446 TGCCTAGCAGCAACAACC 57.921 55.556 0.00 0.00 40.56 3.77
4740 6341 0.609131 GAGGGTTTTGCCTAGCAGCA 60.609 55.000 0.00 0.00 40.61 4.41
4741 6342 1.315981 GGAGGGTTTTGCCTAGCAGC 61.316 60.000 0.00 0.00 40.61 5.25
4742 6343 0.681243 GGGAGGGTTTTGCCTAGCAG 60.681 60.000 0.00 0.00 40.61 4.24
4743 6344 1.140134 AGGGAGGGTTTTGCCTAGCA 61.140 55.000 0.00 0.00 37.11 3.49
4744 6345 0.039764 AAGGGAGGGTTTTGCCTAGC 59.960 55.000 0.00 0.00 38.02 3.42
4745 6346 1.636003 AGAAGGGAGGGTTTTGCCTAG 59.364 52.381 0.00 0.00 38.02 3.02
4746 6347 1.354368 CAGAAGGGAGGGTTTTGCCTA 59.646 52.381 0.00 0.00 38.02 3.93
4747 6348 0.113190 CAGAAGGGAGGGTTTTGCCT 59.887 55.000 0.00 0.00 41.12 4.75
4748 6349 0.178961 ACAGAAGGGAGGGTTTTGCC 60.179 55.000 0.00 0.00 0.00 4.52
4749 6350 1.248486 GACAGAAGGGAGGGTTTTGC 58.752 55.000 0.00 0.00 0.00 3.68
4750 6351 2.656947 TGACAGAAGGGAGGGTTTTG 57.343 50.000 0.00 0.00 0.00 2.44
4751 6352 2.225117 CCATGACAGAAGGGAGGGTTTT 60.225 50.000 0.00 0.00 0.00 2.43
4752 6353 1.355720 CCATGACAGAAGGGAGGGTTT 59.644 52.381 0.00 0.00 0.00 3.27
4753 6354 0.995024 CCATGACAGAAGGGAGGGTT 59.005 55.000 0.00 0.00 0.00 4.11
4754 6355 0.119155 TCCATGACAGAAGGGAGGGT 59.881 55.000 0.00 0.00 0.00 4.34
4755 6356 1.289160 TTCCATGACAGAAGGGAGGG 58.711 55.000 0.00 0.00 0.00 4.30
4756 6357 3.549794 GATTTCCATGACAGAAGGGAGG 58.450 50.000 0.00 0.00 0.00 4.30
4757 6358 3.118629 TCGATTTCCATGACAGAAGGGAG 60.119 47.826 0.00 0.00 0.00 4.30
4758 6359 2.837591 TCGATTTCCATGACAGAAGGGA 59.162 45.455 0.00 0.00 0.00 4.20
4759 6360 3.266510 TCGATTTCCATGACAGAAGGG 57.733 47.619 0.00 0.00 0.00 3.95
4760 6361 3.562973 CCATCGATTTCCATGACAGAAGG 59.437 47.826 0.00 0.00 0.00 3.46
4761 6362 3.003068 GCCATCGATTTCCATGACAGAAG 59.997 47.826 0.00 0.00 0.00 2.85
4762 6363 2.945008 GCCATCGATTTCCATGACAGAA 59.055 45.455 0.00 0.00 0.00 3.02
4763 6364 2.093021 TGCCATCGATTTCCATGACAGA 60.093 45.455 0.00 0.00 0.00 3.41
4764 6365 2.291365 TGCCATCGATTTCCATGACAG 58.709 47.619 0.00 0.00 0.00 3.51
4765 6366 2.416680 TGCCATCGATTTCCATGACA 57.583 45.000 0.00 0.00 0.00 3.58
4766 6367 2.620115 ACATGCCATCGATTTCCATGAC 59.380 45.455 24.92 0.00 37.36 3.06
4767 6368 2.934887 ACATGCCATCGATTTCCATGA 58.065 42.857 24.92 0.00 37.36 3.07
4768 6369 3.377439 CAACATGCCATCGATTTCCATG 58.623 45.455 19.98 19.98 39.23 3.66
4769 6370 2.223876 GCAACATGCCATCGATTTCCAT 60.224 45.455 0.00 0.00 37.42 3.41
4770 6371 1.134753 GCAACATGCCATCGATTTCCA 59.865 47.619 0.00 0.00 37.42 3.53
4771 6372 1.843992 GCAACATGCCATCGATTTCC 58.156 50.000 0.00 0.00 37.42 3.13
4772 6373 1.063912 TCGCAACATGCCATCGATTTC 59.936 47.619 0.00 0.00 41.12 2.17
4773 6374 1.064505 CTCGCAACATGCCATCGATTT 59.935 47.619 0.00 0.00 41.12 2.17
4774 6375 0.659427 CTCGCAACATGCCATCGATT 59.341 50.000 0.00 0.00 41.12 3.34
4775 6376 1.162181 CCTCGCAACATGCCATCGAT 61.162 55.000 0.00 0.00 41.12 3.59
4776 6377 1.815003 CCTCGCAACATGCCATCGA 60.815 57.895 0.00 0.00 41.12 3.59
4777 6378 2.711311 CCTCGCAACATGCCATCG 59.289 61.111 0.00 0.00 41.12 3.84
4778 6379 2.410469 GCCTCGCAACATGCCATC 59.590 61.111 0.00 0.00 41.12 3.51
4779 6380 3.511595 CGCCTCGCAACATGCCAT 61.512 61.111 0.00 0.00 41.12 4.40
4790 6391 4.157958 GCAAAGCTCAGCGCCTCG 62.158 66.667 2.29 0.00 40.39 4.63
4791 6392 3.808656 GGCAAAGCTCAGCGCCTC 61.809 66.667 2.29 0.00 41.50 4.70
4793 6394 2.924105 AAAGGCAAAGCTCAGCGCC 61.924 57.895 2.29 5.94 45.23 6.53
4794 6395 1.731969 CAAAGGCAAAGCTCAGCGC 60.732 57.895 0.00 0.00 39.57 5.92
4795 6396 0.386478 GTCAAAGGCAAAGCTCAGCG 60.386 55.000 0.00 0.00 0.00 5.18
4796 6397 0.957362 AGTCAAAGGCAAAGCTCAGC 59.043 50.000 0.00 0.00 0.00 4.26
4797 6398 2.224606 TGAGTCAAAGGCAAAGCTCAG 58.775 47.619 0.00 0.00 0.00 3.35
4798 6399 2.346766 TGAGTCAAAGGCAAAGCTCA 57.653 45.000 0.00 0.00 0.00 4.26
4799 6400 3.005155 ACATTGAGTCAAAGGCAAAGCTC 59.995 43.478 10.14 0.00 0.00 4.09
4800 6401 2.961062 ACATTGAGTCAAAGGCAAAGCT 59.039 40.909 10.14 0.00 0.00 3.74
4801 6402 3.311966 GACATTGAGTCAAAGGCAAAGC 58.688 45.455 10.14 0.00 46.77 3.51
4813 6414 1.738099 GACGCGCCTGACATTGAGT 60.738 57.895 5.73 0.00 0.00 3.41
4814 6415 1.446792 AGACGCGCCTGACATTGAG 60.447 57.895 5.73 0.00 0.00 3.02
4815 6416 2.656646 AGACGCGCCTGACATTGA 59.343 55.556 5.73 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.