Multiple sequence alignment - TraesCS3B01G330600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G330600 chr3B 100.000 5336 0 0 1 5336 534966585 534961250 0.000000e+00 9854.0
1 TraesCS3B01G330600 chr3B 80.891 696 123 9 1120 1810 146183121 146182431 1.690000e-149 540.0
2 TraesCS3B01G330600 chr3B 73.018 656 161 16 1124 1771 169628705 169629352 3.240000e-52 217.0
3 TraesCS3B01G330600 chr3D 92.109 2636 133 33 1 2605 409023106 409020515 0.000000e+00 3646.0
4 TraesCS3B01G330600 chr3D 93.230 1034 37 11 4311 5323 409018311 409017290 0.000000e+00 1491.0
5 TraesCS3B01G330600 chr3D 95.699 558 14 3 3184 3738 409019807 409019257 0.000000e+00 889.0
6 TraesCS3B01G330600 chr3D 97.037 405 9 1 3751 4152 409018948 409018544 0.000000e+00 678.0
7 TraesCS3B01G330600 chr3D 81.556 694 120 7 1121 1810 95246491 95245802 2.790000e-157 566.0
8 TraesCS3B01G330600 chr3D 97.685 216 5 0 2824 3039 409020506 409020291 6.530000e-99 372.0
9 TraesCS3B01G330600 chr3D 96.026 151 6 0 4147 4297 409018515 409018365 4.130000e-61 246.0
10 TraesCS3B01G330600 chr3D 94.068 118 5 1 3073 3188 409020313 409020196 1.530000e-40 178.0
11 TraesCS3B01G330600 chr3A 92.297 2233 78 30 469 2671 542202155 542204323 0.000000e+00 3085.0
12 TraesCS3B01G330600 chr3A 89.746 1063 30 28 4305 5310 542206150 542207190 0.000000e+00 1286.0
13 TraesCS3B01G330600 chr3A 91.769 899 52 7 2824 3707 542204474 542205365 0.000000e+00 1230.0
14 TraesCS3B01G330600 chr3A 88.626 422 37 7 1 416 542201669 542202085 2.220000e-138 503.0
15 TraesCS3B01G330600 chr3A 91.329 346 16 1 3807 4152 542205415 542205746 1.350000e-125 460.0
16 TraesCS3B01G330600 chr3A 72.672 655 165 14 1124 1771 112957467 112958114 7.010000e-49 206.0
17 TraesCS3B01G330600 chr3A 87.571 177 11 4 4147 4313 542205776 542205951 1.520000e-45 195.0
18 TraesCS3B01G330600 chr3A 95.763 118 4 1 2673 2790 542204361 542204477 7.050000e-44 189.0
19 TraesCS3B01G330600 chr1B 81.056 1420 233 29 1116 2517 576205530 576206931 0.000000e+00 1099.0
20 TraesCS3B01G330600 chr1A 80.742 1402 242 23 1130 2517 521629162 521630549 0.000000e+00 1068.0
21 TraesCS3B01G330600 chr1D 80.409 1419 244 28 1116 2517 426586983 426588384 0.000000e+00 1050.0
22 TraesCS3B01G330600 chr1D 89.552 67 4 1 3735 3801 48193880 48193817 1.230000e-11 82.4
23 TraesCS3B01G330600 chr1D 87.324 71 5 3 3735 3801 464799798 464799728 1.590000e-10 78.7
24 TraesCS3B01G330600 chr7D 88.406 69 4 3 3737 3801 46702662 46702730 4.430000e-11 80.5
25 TraesCS3B01G330600 chr7B 87.500 72 6 3 3738 3809 196390889 196390821 4.430000e-11 80.5
26 TraesCS3B01G330600 chr7B 88.235 68 6 2 3734 3801 388175906 388175841 4.430000e-11 80.5
27 TraesCS3B01G330600 chr7A 88.060 67 7 1 3736 3801 135963904 135963970 1.590000e-10 78.7
28 TraesCS3B01G330600 chr5D 87.879 66 6 1 3738 3801 441356408 441356343 5.730000e-10 76.8
29 TraesCS3B01G330600 chr2A 87.143 70 5 2 3732 3801 102678161 102678096 5.730000e-10 76.8
30 TraesCS3B01G330600 chr5B 87.500 48 4 2 1047 1092 499381008 499381055 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G330600 chr3B 534961250 534966585 5335 True 9854.000000 9854 100.000000 1 5336 1 chr3B.!!$R2 5335
1 TraesCS3B01G330600 chr3B 146182431 146183121 690 True 540.000000 540 80.891000 1120 1810 1 chr3B.!!$R1 690
2 TraesCS3B01G330600 chr3B 169628705 169629352 647 False 217.000000 217 73.018000 1124 1771 1 chr3B.!!$F1 647
3 TraesCS3B01G330600 chr3D 409017290 409023106 5816 True 1071.428571 3646 95.122000 1 5323 7 chr3D.!!$R2 5322
4 TraesCS3B01G330600 chr3D 95245802 95246491 689 True 566.000000 566 81.556000 1121 1810 1 chr3D.!!$R1 689
5 TraesCS3B01G330600 chr3A 542201669 542207190 5521 False 992.571429 3085 91.014429 1 5310 7 chr3A.!!$F2 5309
6 TraesCS3B01G330600 chr3A 112957467 112958114 647 False 206.000000 206 72.672000 1124 1771 1 chr3A.!!$F1 647
7 TraesCS3B01G330600 chr1B 576205530 576206931 1401 False 1099.000000 1099 81.056000 1116 2517 1 chr1B.!!$F1 1401
8 TraesCS3B01G330600 chr1A 521629162 521630549 1387 False 1068.000000 1068 80.742000 1130 2517 1 chr1A.!!$F1 1387
9 TraesCS3B01G330600 chr1D 426586983 426588384 1401 False 1050.000000 1050 80.409000 1116 2517 1 chr1D.!!$F1 1401

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
704 751 0.106149 CCTCGAAATAGGGAACGGGG 59.894 60.000 0.0 0.0 39.94 5.73 F
879 940 0.385974 CGGAGCAAAGGAAACAAGCG 60.386 55.000 0.0 0.0 0.00 4.68 F
1989 2090 0.322975 ATGATATGCTCGACCTGGGC 59.677 55.000 0.0 0.0 0.00 5.36 F
2266 2367 1.412710 TCATCTCGGGTGAACCTATGC 59.587 52.381 0.0 0.0 36.97 3.14 F
3821 4668 1.520787 GATTACCCACTGCCCGACG 60.521 63.158 0.0 0.0 0.00 5.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1989 2090 0.689412 GAGGAAGAGGGTCTGGGAGG 60.689 65.0 0.00 0.0 0.00 4.30 R
2409 2510 0.831307 CCACTACTACAAGGGAGGGC 59.169 60.0 0.00 0.0 0.00 5.19 R
3739 4287 0.540830 CTAGGATGGGACGGAGGGAG 60.541 65.0 0.00 0.0 0.00 4.30 R
4102 4949 0.406361 TTTGGCATACCCGAAACCCT 59.594 50.0 0.00 0.0 33.89 4.34 R
5167 6340 0.970937 ATGGTCGACACCCATCGTCT 60.971 55.0 18.91 0.0 42.99 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
114 117 4.913335 AGAGAACAAGAAGTACACGTCA 57.087 40.909 0.00 0.00 0.00 4.35
119 122 3.527533 ACAAGAAGTACACGTCAGCAAA 58.472 40.909 0.00 0.00 0.00 3.68
120 123 3.936453 ACAAGAAGTACACGTCAGCAAAA 59.064 39.130 0.00 0.00 0.00 2.44
152 155 7.697691 ACATCTATAACCTTTTGAGAATTGCG 58.302 34.615 0.00 0.00 0.00 4.85
194 197 8.367660 ACACCTTCTAGATAGAACTCAATCAA 57.632 34.615 0.00 0.00 37.40 2.57
216 219 6.873076 TCAAAATTGCAACAACTCAAAGACTT 59.127 30.769 0.00 0.00 0.00 3.01
233 236 3.064820 AGACTTGTTGTTAACACCGCAAG 59.935 43.478 27.48 27.48 41.97 4.01
250 253 3.562505 GCAAGCACTTCAATGTTCAGAG 58.437 45.455 0.00 0.00 0.00 3.35
254 257 6.183360 GCAAGCACTTCAATGTTCAGAGATAT 60.183 38.462 0.00 0.00 0.00 1.63
256 259 8.549548 CAAGCACTTCAATGTTCAGAGATATAG 58.450 37.037 0.00 0.00 0.00 1.31
280 283 7.761409 AGCTTATGTTGAAATAGATTTTCGCA 58.239 30.769 0.00 0.00 0.00 5.10
291 294 9.118236 GAAATAGATTTTCGCATGGCTTTATAC 57.882 33.333 0.00 0.00 0.00 1.47
321 324 4.634184 ACTACCACGTCTATACAAGCAG 57.366 45.455 0.00 0.00 0.00 4.24
374 383 2.079925 GGCAAAAGCACAAACAAACCA 58.920 42.857 0.00 0.00 0.00 3.67
378 387 4.616381 GCAAAAGCACAAACAAACCAAAAG 59.384 37.500 0.00 0.00 0.00 2.27
384 393 5.998363 AGCACAAACAAACCAAAAGGTAAAA 59.002 32.000 0.00 0.00 0.00 1.52
385 394 6.148645 AGCACAAACAAACCAAAAGGTAAAAG 59.851 34.615 0.00 0.00 0.00 2.27
388 397 8.560374 CACAAACAAACCAAAAGGTAAAAGAAA 58.440 29.630 0.00 0.00 0.00 2.52
389 398 9.290988 ACAAACAAACCAAAAGGTAAAAGAAAT 57.709 25.926 0.00 0.00 0.00 2.17
391 400 8.500753 AACAAACCAAAAGGTAAAAGAAATCC 57.499 30.769 0.00 0.00 0.00 3.01
393 402 8.103935 ACAAACCAAAAGGTAAAAGAAATCCAA 58.896 29.630 0.00 0.00 0.00 3.53
394 403 8.394877 CAAACCAAAAGGTAAAAGAAATCCAAC 58.605 33.333 0.00 0.00 0.00 3.77
395 404 7.432148 ACCAAAAGGTAAAAGAAATCCAACT 57.568 32.000 0.00 0.00 0.00 3.16
396 405 7.497595 ACCAAAAGGTAAAAGAAATCCAACTC 58.502 34.615 0.00 0.00 0.00 3.01
397 406 6.929049 CCAAAAGGTAAAAGAAATCCAACTCC 59.071 38.462 0.00 0.00 0.00 3.85
398 407 7.202001 CCAAAAGGTAAAAGAAATCCAACTCCT 60.202 37.037 0.00 0.00 0.00 3.69
399 408 8.856103 CAAAAGGTAAAAGAAATCCAACTCCTA 58.144 33.333 0.00 0.00 0.00 2.94
410 419 8.223330 AGAAATCCAACTCCTATATTTGCAGAT 58.777 33.333 0.00 0.00 0.00 2.90
417 426 6.706295 ACTCCTATATTTGCAGATAGAAGCC 58.294 40.000 11.83 0.00 0.00 4.35
419 428 6.467677 TCCTATATTTGCAGATAGAAGCCAC 58.532 40.000 11.83 0.00 0.00 5.01
420 429 5.645497 CCTATATTTGCAGATAGAAGCCACC 59.355 44.000 11.83 0.00 0.00 4.61
423 432 0.901827 TGCAGATAGAAGCCACCGAA 59.098 50.000 0.00 0.00 0.00 4.30
441 450 4.097286 ACCGAACAAATTGTAACACTGCTT 59.903 37.500 0.00 0.00 0.00 3.91
448 457 2.169832 TGTAACACTGCTTGAGCCTC 57.830 50.000 0.00 0.00 41.18 4.70
449 458 1.071605 GTAACACTGCTTGAGCCTCG 58.928 55.000 0.00 0.00 41.18 4.63
549 588 2.096218 GCACTACTCAAAGAGTTTGCCG 60.096 50.000 16.54 1.03 40.28 5.69
550 589 2.480419 CACTACTCAAAGAGTTTGCCGG 59.520 50.000 4.85 0.00 40.28 6.13
558 597 5.525199 TCAAAGAGTTTGCCGGAATAAAAC 58.475 37.500 5.05 9.94 40.43 2.43
562 601 4.698780 AGAGTTTGCCGGAATAAAACTACC 59.301 41.667 18.86 11.35 42.60 3.18
563 602 3.760151 AGTTTGCCGGAATAAAACTACCC 59.240 43.478 17.93 0.87 41.19 3.69
564 603 3.724732 TTGCCGGAATAAAACTACCCT 57.275 42.857 5.05 0.00 0.00 4.34
565 604 2.993937 TGCCGGAATAAAACTACCCTG 58.006 47.619 5.05 0.00 0.00 4.45
567 606 2.942306 GCCGGAATAAAACTACCCTGCA 60.942 50.000 5.05 0.00 0.00 4.41
568 607 2.681344 CCGGAATAAAACTACCCTGCAC 59.319 50.000 0.00 0.00 0.00 4.57
569 608 3.606687 CGGAATAAAACTACCCTGCACT 58.393 45.455 0.00 0.00 0.00 4.40
573 616 6.156519 GGAATAAAACTACCCTGCACTTTTG 58.843 40.000 0.00 0.00 0.00 2.44
582 625 3.118775 ACCCTGCACTTTTGTTCCTTTTC 60.119 43.478 0.00 0.00 0.00 2.29
611 654 5.949354 TGGCAAACTTATTTACAGCTGGTAT 59.051 36.000 19.93 10.40 0.00 2.73
616 659 5.295152 ACTTATTTACAGCTGGTATACCGC 58.705 41.667 23.01 23.01 39.43 5.68
701 748 5.813080 AAAAATCCTCGAAATAGGGAACG 57.187 39.130 0.00 0.00 37.24 3.95
702 749 3.470645 AATCCTCGAAATAGGGAACGG 57.529 47.619 0.00 0.00 37.24 4.44
703 750 1.117150 TCCTCGAAATAGGGAACGGG 58.883 55.000 0.00 0.00 37.24 5.28
704 751 0.106149 CCTCGAAATAGGGAACGGGG 59.894 60.000 0.00 0.00 39.94 5.73
705 752 0.106149 CTCGAAATAGGGAACGGGGG 59.894 60.000 0.00 0.00 0.00 5.40
706 753 1.525306 CGAAATAGGGAACGGGGGC 60.525 63.158 0.00 0.00 0.00 5.80
707 754 1.525306 GAAATAGGGAACGGGGGCG 60.525 63.158 0.00 0.00 0.00 6.13
708 755 2.953247 GAAATAGGGAACGGGGGCGG 62.953 65.000 0.00 0.00 0.00 6.13
726 773 1.733526 GGGAAAAAGCTGTGCACGT 59.266 52.632 13.13 0.00 0.00 4.49
775 829 8.682936 ACAAACCCATAAAAATACAAAATGCA 57.317 26.923 0.00 0.00 0.00 3.96
786 842 0.527565 CAAAATGCAAGGAGACGGGG 59.472 55.000 0.00 0.00 0.00 5.73
878 939 3.479255 CGGAGCAAAGGAAACAAGC 57.521 52.632 0.00 0.00 0.00 4.01
879 940 0.385974 CGGAGCAAAGGAAACAAGCG 60.386 55.000 0.00 0.00 0.00 4.68
880 941 0.951558 GGAGCAAAGGAAACAAGCGA 59.048 50.000 0.00 0.00 0.00 4.93
881 942 1.068954 GGAGCAAAGGAAACAAGCGAG 60.069 52.381 0.00 0.00 0.00 5.03
882 943 0.954452 AGCAAAGGAAACAAGCGAGG 59.046 50.000 0.00 0.00 0.00 4.63
883 944 0.664466 GCAAAGGAAACAAGCGAGGC 60.664 55.000 0.00 0.00 0.00 4.70
884 945 0.385974 CAAAGGAAACAAGCGAGGCG 60.386 55.000 0.00 0.00 0.00 5.52
885 946 0.534203 AAAGGAAACAAGCGAGGCGA 60.534 50.000 0.00 0.00 0.00 5.54
886 947 0.951040 AAGGAAACAAGCGAGGCGAG 60.951 55.000 0.00 0.00 0.00 5.03
887 948 2.391389 GGAAACAAGCGAGGCGAGG 61.391 63.158 0.00 0.00 0.00 4.63
888 949 3.028366 GAAACAAGCGAGGCGAGGC 62.028 63.158 0.00 0.00 0.00 4.70
1003 1074 4.388499 GCCACCACCCGTCGATGT 62.388 66.667 3.52 0.00 0.00 3.06
1647 1730 1.520666 CTATGTCGCCCCCGAAGTT 59.479 57.895 0.00 0.00 46.34 2.66
1956 2039 0.596600 ACGACCAGCTGTACAACGTG 60.597 55.000 13.81 0.00 0.00 4.49
1989 2090 0.322975 ATGATATGCTCGACCTGGGC 59.677 55.000 0.00 0.00 0.00 5.36
2047 2148 2.158842 CCTCCATCTCCATCTCCACAAC 60.159 54.545 0.00 0.00 0.00 3.32
2266 2367 1.412710 TCATCTCGGGTGAACCTATGC 59.587 52.381 0.00 0.00 36.97 3.14
2409 2510 2.216488 CGCGGAGATATTTGAACTCACG 59.784 50.000 0.00 0.00 33.00 4.35
2475 2576 9.995003 GATAAGGAAGAGTATGATGATTTCTGT 57.005 33.333 0.00 0.00 0.00 3.41
2555 2656 6.659242 CCAAATACACCTACCATTTCTGAGTT 59.341 38.462 0.00 0.00 0.00 3.01
2597 2698 2.863809 TCCTCCCTTTTTCTCTTGTGC 58.136 47.619 0.00 0.00 0.00 4.57
2611 2712 5.674525 TCTCTTGTGCTGGAGGTAAATATG 58.325 41.667 0.00 0.00 0.00 1.78
2666 2767 4.142359 TGTTGCGCGGAAAATGGTATTATT 60.142 37.500 16.61 0.00 0.00 1.40
2671 2772 5.342259 GCGCGGAAAATGGTATTATTTGATC 59.658 40.000 8.83 0.00 31.05 2.92
2679 2816 7.601705 AATGGTATTATTTGATCCTTGGGTG 57.398 36.000 0.00 0.00 0.00 4.61
2798 2935 9.459640 CTGTATCATAAAATTGCATTCTCAAGG 57.540 33.333 0.00 0.00 0.00 3.61
2799 2936 9.187996 TGTATCATAAAATTGCATTCTCAAGGA 57.812 29.630 0.00 0.00 0.00 3.36
2803 2940 9.947433 TCATAAAATTGCATTCTCAAGGATTTT 57.053 25.926 5.55 5.55 0.00 1.82
2807 2944 9.947433 AAAATTGCATTCTCAAGGATTTTATCA 57.053 25.926 0.00 0.00 0.00 2.15
2808 2945 9.947433 AAATTGCATTCTCAAGGATTTTATCAA 57.053 25.926 0.00 0.00 0.00 2.57
2810 2947 9.760077 ATTGCATTCTCAAGGATTTTATCAATC 57.240 29.630 0.00 0.00 0.00 2.67
2811 2948 8.529424 TGCATTCTCAAGGATTTTATCAATCT 57.471 30.769 0.00 0.00 0.00 2.40
2812 2949 9.631257 TGCATTCTCAAGGATTTTATCAATCTA 57.369 29.630 0.00 0.00 0.00 1.98
2948 3085 3.182967 GCAGTTTGATCTACTCACCTCG 58.817 50.000 0.00 0.00 32.17 4.63
2992 3129 8.709646 ACGATTGAAATCTCTACTACACAAAAC 58.290 33.333 0.00 0.00 33.24 2.43
3048 3185 7.543947 TCGTAGTTCTAATCAGATGTACGAA 57.456 36.000 7.47 0.00 42.72 3.85
3049 3186 7.977904 TCGTAGTTCTAATCAGATGTACGAAA 58.022 34.615 7.47 0.00 42.72 3.46
3051 3188 9.234384 CGTAGTTCTAATCAGATGTACGAAAAT 57.766 33.333 2.64 0.00 41.21 1.82
3150 3293 8.947055 AATTGTTTCACTTGTTTCTTAAGCAT 57.053 26.923 0.00 0.00 0.00 3.79
3196 3735 6.147864 AGAGTAGCTCTGCATTTCTCTAAG 57.852 41.667 0.00 0.00 39.62 2.18
3217 3756 9.817809 TCTAAGAAAGCTTGTCGATTATACAAT 57.182 29.630 0.00 0.00 36.33 2.71
3221 3760 9.601217 AGAAAGCTTGTCGATTATACAATAGTT 57.399 29.630 0.00 0.00 36.33 2.24
3301 3843 1.648568 AGAGTGGAGAATCAGAGGGGA 59.351 52.381 0.00 0.00 36.25 4.81
3432 3980 6.717289 ACCACACTTCAATAGCATAGGTTTA 58.283 36.000 0.00 0.00 0.00 2.01
3441 3989 5.857471 ATAGCATAGGTTTACGTGGTGTA 57.143 39.130 0.00 0.00 0.00 2.90
3743 4291 8.691797 TGGAGCACATTTTTATTTATTACTCCC 58.308 33.333 0.00 0.00 38.40 4.30
3744 4292 8.914011 GGAGCACATTTTTATTTATTACTCCCT 58.086 33.333 0.00 0.00 34.14 4.20
3747 4295 7.860872 GCACATTTTTATTTATTACTCCCTCCG 59.139 37.037 0.00 0.00 0.00 4.63
3749 4297 9.117183 ACATTTTTATTTATTACTCCCTCCGTC 57.883 33.333 0.00 0.00 0.00 4.79
3771 4615 3.005554 CCATCCTAGTGCAGTGTCAAAG 58.994 50.000 3.69 0.00 0.00 2.77
3805 4652 1.757340 GGGACGGAGGGAGTTCGAT 60.757 63.158 0.00 0.00 0.00 3.59
3821 4668 1.520787 GATTACCCACTGCCCGACG 60.521 63.158 0.00 0.00 0.00 5.12
3888 4735 8.491045 TGATGGTATAGATCCATGACTTTACA 57.509 34.615 2.04 0.00 44.52 2.41
4102 4949 2.433604 TGCTGGCAAGAAAAATGAACCA 59.566 40.909 0.00 0.00 0.00 3.67
4109 4956 4.511454 GCAAGAAAAATGAACCAGGGTTTC 59.489 41.667 4.99 0.00 38.60 2.78
4176 5058 1.349688 ACCCTTAGCATCCAAACGTCA 59.650 47.619 0.00 0.00 0.00 4.35
4179 5061 3.443681 CCCTTAGCATCCAAACGTCAAAT 59.556 43.478 0.00 0.00 0.00 2.32
4211 5093 1.908619 TGCTTACCTGAAGGCTGATGA 59.091 47.619 0.00 0.00 39.32 2.92
4282 5172 7.017645 GTGAATGTGATGTGTTGAAGTATGTC 58.982 38.462 0.00 0.00 0.00 3.06
4299 5189 9.461312 GAAGTATGTCAATTGCCCCATATATAA 57.539 33.333 0.00 0.00 0.00 0.98
4300 5190 9.466497 AAGTATGTCAATTGCCCCATATATAAG 57.534 33.333 0.00 0.00 0.00 1.73
4301 5191 6.780457 ATGTCAATTGCCCCATATATAAGC 57.220 37.500 0.00 0.00 0.00 3.09
4302 5192 5.639139 TGTCAATTGCCCCATATATAAGCA 58.361 37.500 0.00 0.63 0.00 3.91
4303 5193 6.255287 TGTCAATTGCCCCATATATAAGCAT 58.745 36.000 0.00 0.00 32.67 3.79
4307 5418 8.916062 TCAATTGCCCCATATATAAGCATATTG 58.084 33.333 0.00 18.15 35.58 1.90
4400 5511 5.542779 GACTCTCCAAGCTAGAAAGAAACA 58.457 41.667 0.00 0.00 0.00 2.83
4424 5536 1.227823 CGGGTGCAACTGACAGGAA 60.228 57.895 3.87 0.00 36.74 3.36
4455 5567 2.044555 TAGTCTCGGGCACTGACGG 61.045 63.158 3.82 0.00 39.80 4.79
4557 5669 1.811679 GTCGCCCTAGCTGCTGTTC 60.812 63.158 13.43 0.00 36.60 3.18
4565 5677 4.009675 CCCTAGCTGCTGTTCAAATGTTA 58.990 43.478 13.43 0.00 0.00 2.41
4568 5680 6.238484 CCCTAGCTGCTGTTCAAATGTTATAC 60.238 42.308 13.43 0.00 0.00 1.47
4608 5725 5.365025 AGCTGATGATTGTGTATGTACTCCT 59.635 40.000 0.00 0.00 0.00 3.69
4656 5781 7.948034 TTTGGGTAATCGTTAATTCAAGGAT 57.052 32.000 0.00 0.00 42.20 3.24
4687 5812 6.156602 TGATTGAGGAATAAATTGGGTGCAAT 59.843 34.615 0.00 0.00 0.00 3.56
4740 5881 3.194861 CGTGCTTGGATTCCGAATCTTA 58.805 45.455 18.46 7.56 38.01 2.10
4886 6052 1.609061 CGTAGGTGATGATGGATGGCC 60.609 57.143 0.00 0.00 0.00 5.36
5101 6274 2.734723 CCCCATCGTATCTGCGCG 60.735 66.667 0.00 0.00 0.00 6.86
5199 6372 3.240069 GTCGACCATTAATACGATCGGG 58.760 50.000 20.98 11.28 37.14 5.14
5207 6380 7.218614 ACCATTAATACGATCGGGAAAATACA 58.781 34.615 20.98 0.00 0.00 2.29
5208 6381 7.716123 ACCATTAATACGATCGGGAAAATACAA 59.284 33.333 20.98 1.24 0.00 2.41
5246 6420 6.295039 TGTGGAGTATTTGAAAAGACGTTC 57.705 37.500 0.00 0.00 35.40 3.95
5283 6457 3.508762 GTCGTGTTTGATGTATCTCGGT 58.491 45.455 0.00 0.00 0.00 4.69
5316 6490 1.003118 AGCACATATTCCGGTGTGTGT 59.997 47.619 20.32 13.18 45.66 3.72
5319 6493 2.159430 CACATATTCCGGTGTGTGTGTG 59.841 50.000 21.34 16.41 40.54 3.82
5321 6495 3.007074 ACATATTCCGGTGTGTGTGTGTA 59.993 43.478 0.00 0.00 0.00 2.90
5322 6496 2.851263 ATTCCGGTGTGTGTGTGTAT 57.149 45.000 0.00 0.00 0.00 2.29
5323 6497 3.965379 ATTCCGGTGTGTGTGTGTATA 57.035 42.857 0.00 0.00 0.00 1.47
5324 6498 3.306917 TTCCGGTGTGTGTGTGTATAG 57.693 47.619 0.00 0.00 0.00 1.31
5325 6499 1.546923 TCCGGTGTGTGTGTGTATAGG 59.453 52.381 0.00 0.00 0.00 2.57
5326 6500 1.274167 CCGGTGTGTGTGTGTATAGGT 59.726 52.381 0.00 0.00 0.00 3.08
5327 6501 2.492881 CCGGTGTGTGTGTGTATAGGTA 59.507 50.000 0.00 0.00 0.00 3.08
5328 6502 3.504863 CGGTGTGTGTGTGTATAGGTAC 58.495 50.000 0.00 0.00 0.00 3.34
5329 6503 3.192001 CGGTGTGTGTGTGTATAGGTACT 59.808 47.826 0.00 0.00 46.37 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 85 9.871238 GTACTTCTTGTTCTCTATATGGTTTCA 57.129 33.333 0.00 0.00 0.00 2.69
138 141 6.144854 TGTTTGATCTCGCAATTCTCAAAAG 58.855 36.000 0.00 0.00 37.51 2.27
147 150 6.144402 GTGTTCAAAATGTTTGATCTCGCAAT 59.856 34.615 4.37 0.00 0.00 3.56
152 155 7.428826 AGAAGGTGTTCAAAATGTTTGATCTC 58.571 34.615 4.37 5.19 34.82 2.75
194 197 6.651755 CAAGTCTTTGAGTTGTTGCAATTT 57.348 33.333 0.59 0.00 37.96 1.82
216 219 1.095600 TGCTTGCGGTGTTAACAACA 58.904 45.000 22.89 12.82 39.52 3.33
233 236 6.705381 AGCTATATCTCTGAACATTGAAGTGC 59.295 38.462 0.00 0.00 0.00 4.40
254 257 8.888716 TGCGAAAATCTATTTCAACATAAGCTA 58.111 29.630 0.00 0.00 0.00 3.32
256 259 7.969387 TGCGAAAATCTATTTCAACATAAGC 57.031 32.000 0.00 0.00 0.00 3.09
262 265 5.343249 AGCCATGCGAAAATCTATTTCAAC 58.657 37.500 0.00 0.00 0.00 3.18
291 294 6.976349 TGTATAGACGTGGTAGTTGCTTTATG 59.024 38.462 0.00 0.00 0.00 1.90
321 324 9.665264 GACCTTATATTAACTTAGCATTTGCAC 57.335 33.333 5.20 0.00 45.16 4.57
331 334 5.012354 CCCCGGCAGACCTTATATTAACTTA 59.988 44.000 0.00 0.00 0.00 2.24
374 383 7.914427 AGGAGTTGGATTTCTTTTACCTTTT 57.086 32.000 0.00 0.00 0.00 2.27
384 393 7.577303 TCTGCAAATATAGGAGTTGGATTTCT 58.423 34.615 0.00 0.00 32.78 2.52
385 394 7.807977 TCTGCAAATATAGGAGTTGGATTTC 57.192 36.000 0.00 0.00 32.78 2.17
388 397 8.441311 TCTATCTGCAAATATAGGAGTTGGAT 57.559 34.615 9.37 0.00 32.78 3.41
389 398 7.855784 TCTATCTGCAAATATAGGAGTTGGA 57.144 36.000 9.37 0.00 33.64 3.53
391 400 7.118971 GGCTTCTATCTGCAAATATAGGAGTTG 59.881 40.741 15.25 0.00 34.83 3.16
393 402 6.270927 TGGCTTCTATCTGCAAATATAGGAGT 59.729 38.462 15.25 0.00 34.83 3.85
394 403 6.593382 GTGGCTTCTATCTGCAAATATAGGAG 59.407 42.308 11.75 11.75 35.28 3.69
395 404 6.467677 GTGGCTTCTATCTGCAAATATAGGA 58.532 40.000 9.37 2.32 0.00 2.94
396 405 5.645497 GGTGGCTTCTATCTGCAAATATAGG 59.355 44.000 9.37 0.00 0.00 2.57
397 406 5.349817 CGGTGGCTTCTATCTGCAAATATAG 59.650 44.000 0.00 0.00 0.00 1.31
398 407 5.011635 TCGGTGGCTTCTATCTGCAAATATA 59.988 40.000 0.00 0.00 0.00 0.86
399 408 4.067896 CGGTGGCTTCTATCTGCAAATAT 58.932 43.478 0.00 0.00 0.00 1.28
406 415 2.672961 TGTTCGGTGGCTTCTATCTG 57.327 50.000 0.00 0.00 0.00 2.90
410 419 3.482436 ACAATTTGTTCGGTGGCTTCTA 58.518 40.909 0.00 0.00 0.00 2.10
417 426 3.728718 GCAGTGTTACAATTTGTTCGGTG 59.271 43.478 7.45 1.54 0.00 4.94
419 428 4.223320 AGCAGTGTTACAATTTGTTCGG 57.777 40.909 7.45 0.00 0.00 4.30
420 429 5.270083 TCAAGCAGTGTTACAATTTGTTCG 58.730 37.500 7.45 0.00 0.00 3.95
423 432 4.499696 GGCTCAAGCAGTGTTACAATTTGT 60.500 41.667 7.30 7.30 44.36 2.83
441 450 1.260538 AACATGCTCTCCGAGGCTCA 61.261 55.000 15.95 0.00 0.00 4.26
448 457 6.473455 GGATGAAATTAAAAACATGCTCTCCG 59.527 38.462 0.00 0.00 0.00 4.63
449 458 6.758416 GGGATGAAATTAAAAACATGCTCTCC 59.242 38.462 0.00 0.00 33.04 3.71
455 464 7.607223 ACATGTGGGGATGAAATTAAAAACATG 59.393 33.333 0.00 0.00 44.11 3.21
461 470 9.664332 CAATTTACATGTGGGGATGAAATTAAA 57.336 29.630 9.11 0.00 30.47 1.52
463 472 8.256605 CACAATTTACATGTGGGGATGAAATTA 58.743 33.333 9.11 0.00 43.45 1.40
525 564 4.695455 GGCAAACTCTTTGAGTAGTGCATA 59.305 41.667 24.50 0.00 46.50 3.14
549 588 5.977489 AAAGTGCAGGGTAGTTTTATTCC 57.023 39.130 0.00 0.00 0.00 3.01
550 589 6.745116 ACAAAAGTGCAGGGTAGTTTTATTC 58.255 36.000 0.00 0.00 31.43 1.75
558 597 2.863809 AGGAACAAAAGTGCAGGGTAG 58.136 47.619 0.00 0.00 0.00 3.18
562 601 4.114794 CAGAAAAGGAACAAAAGTGCAGG 58.885 43.478 0.00 0.00 0.00 4.85
563 602 4.563976 CACAGAAAAGGAACAAAAGTGCAG 59.436 41.667 0.00 0.00 0.00 4.41
564 603 4.021544 ACACAGAAAAGGAACAAAAGTGCA 60.022 37.500 0.00 0.00 0.00 4.57
565 604 4.327087 CACACAGAAAAGGAACAAAAGTGC 59.673 41.667 0.00 0.00 0.00 4.40
567 606 4.620567 GCCACACAGAAAAGGAACAAAAGT 60.621 41.667 0.00 0.00 0.00 2.66
568 607 3.865164 GCCACACAGAAAAGGAACAAAAG 59.135 43.478 0.00 0.00 0.00 2.27
569 608 3.259374 TGCCACACAGAAAAGGAACAAAA 59.741 39.130 0.00 0.00 0.00 2.44
573 616 3.119137 AGTTTGCCACACAGAAAAGGAAC 60.119 43.478 0.00 0.00 0.00 3.62
582 625 4.917415 GCTGTAAATAAGTTTGCCACACAG 59.083 41.667 0.00 0.00 34.39 3.66
611 654 2.372074 GGTGGATTGGGAGGCGGTA 61.372 63.158 0.00 0.00 0.00 4.02
616 659 1.595093 GCAAACGGTGGATTGGGAGG 61.595 60.000 0.00 0.00 0.00 4.30
698 745 4.221643 TTTTTCCCCGCCCCCGTT 62.222 61.111 0.00 0.00 0.00 4.44
701 748 4.696805 AGCTTTTTCCCCGCCCCC 62.697 66.667 0.00 0.00 0.00 5.40
702 749 3.381983 CAGCTTTTTCCCCGCCCC 61.382 66.667 0.00 0.00 0.00 5.80
703 750 2.600470 ACAGCTTTTTCCCCGCCC 60.600 61.111 0.00 0.00 0.00 6.13
704 751 2.650778 CACAGCTTTTTCCCCGCC 59.349 61.111 0.00 0.00 0.00 6.13
705 752 2.049156 GCACAGCTTTTTCCCCGC 60.049 61.111 0.00 0.00 0.00 6.13
706 753 1.007387 GTGCACAGCTTTTTCCCCG 60.007 57.895 13.17 0.00 0.00 5.73
707 754 1.007387 CGTGCACAGCTTTTTCCCC 60.007 57.895 18.64 0.00 0.00 4.81
708 755 0.948678 TACGTGCACAGCTTTTTCCC 59.051 50.000 18.64 0.00 0.00 3.97
709 756 1.871039 TCTACGTGCACAGCTTTTTCC 59.129 47.619 18.64 0.00 0.00 3.13
710 757 2.800544 TCTCTACGTGCACAGCTTTTTC 59.199 45.455 18.64 0.00 0.00 2.29
711 758 2.544267 GTCTCTACGTGCACAGCTTTTT 59.456 45.455 18.64 0.00 0.00 1.94
775 829 4.781934 CAGATATTTTTCCCCGTCTCCTT 58.218 43.478 0.00 0.00 0.00 3.36
786 842 3.068732 GCTTGGGAGGGCAGATATTTTTC 59.931 47.826 0.00 0.00 0.00 2.29
860 921 0.385974 CGCTTGTTTCCTTTGCTCCG 60.386 55.000 0.00 0.00 0.00 4.63
861 922 0.951558 TCGCTTGTTTCCTTTGCTCC 59.048 50.000 0.00 0.00 0.00 4.70
870 931 3.028366 GCCTCGCCTCGCTTGTTTC 62.028 63.158 0.00 0.00 0.00 2.78
882 943 2.679132 TATTTCTCGCCTCGCCTCGC 62.679 60.000 0.00 0.00 0.00 5.03
883 944 0.661780 CTATTTCTCGCCTCGCCTCG 60.662 60.000 0.00 0.00 0.00 4.63
884 945 0.386113 ACTATTTCTCGCCTCGCCTC 59.614 55.000 0.00 0.00 0.00 4.70
885 946 0.824759 AACTATTTCTCGCCTCGCCT 59.175 50.000 0.00 0.00 0.00 5.52
886 947 1.653151 AAACTATTTCTCGCCTCGCC 58.347 50.000 0.00 0.00 0.00 5.54
887 948 2.285084 CGAAAACTATTTCTCGCCTCGC 60.285 50.000 0.48 0.00 42.29 5.03
888 949 2.285084 GCGAAAACTATTTCTCGCCTCG 60.285 50.000 2.35 4.10 42.29 4.63
889 950 2.671396 TGCGAAAACTATTTCTCGCCTC 59.329 45.455 10.53 0.00 42.29 4.70
890 951 2.673368 CTGCGAAAACTATTTCTCGCCT 59.327 45.455 10.53 0.00 42.29 5.52
891 952 2.671396 TCTGCGAAAACTATTTCTCGCC 59.329 45.455 10.53 0.00 42.29 5.54
892 953 3.782574 GCTCTGCGAAAACTATTTCTCGC 60.783 47.826 6.58 6.58 42.29 5.03
1206 1289 1.817099 CTTGATGGCCACGCTCTCC 60.817 63.158 8.16 0.00 0.00 3.71
1434 1517 3.378602 TGCTGGAAGTAGCGGCGA 61.379 61.111 12.98 0.00 46.61 5.54
1956 2039 5.599732 AGCATATCATTCTCGGCATCTATC 58.400 41.667 0.00 0.00 0.00 2.08
1989 2090 0.689412 GAGGAAGAGGGTCTGGGAGG 60.689 65.000 0.00 0.00 0.00 4.30
1995 2096 2.307098 CAATGGTTGAGGAAGAGGGTCT 59.693 50.000 0.00 0.00 0.00 3.85
2047 2148 3.249091 CTGAGTCGTCTCCATCAACTTG 58.751 50.000 7.21 0.00 39.75 3.16
2266 2367 6.765989 TCCTCCAATTTCGTTATAATGTCTGG 59.234 38.462 4.63 7.41 0.00 3.86
2409 2510 0.831307 CCACTACTACAAGGGAGGGC 59.169 60.000 0.00 0.00 0.00 5.19
2475 2576 2.708861 TCCTGGCTTCAGTTCCTTGTTA 59.291 45.455 0.00 0.00 36.81 2.41
2575 2676 3.636764 GCACAAGAGAAAAAGGGAGGAAA 59.363 43.478 0.00 0.00 0.00 3.13
2581 2682 2.555757 CTCCAGCACAAGAGAAAAAGGG 59.444 50.000 0.00 0.00 31.43 3.95
2582 2683 2.555757 CCTCCAGCACAAGAGAAAAAGG 59.444 50.000 0.00 0.00 31.43 3.11
2639 2740 2.946329 ACCATTTTCCGCGCAACATATA 59.054 40.909 8.75 0.00 0.00 0.86
2648 2749 5.856455 GGATCAAATAATACCATTTTCCGCG 59.144 40.000 0.00 0.00 0.00 6.46
2650 2751 7.867403 CCAAGGATCAAATAATACCATTTTCCG 59.133 37.037 0.00 0.00 33.10 4.30
2651 2752 8.150296 CCCAAGGATCAAATAATACCATTTTCC 58.850 37.037 0.00 0.00 30.04 3.13
2666 2767 4.447138 AAACTACACACCCAAGGATCAA 57.553 40.909 0.00 0.00 0.00 2.57
2690 2827 8.337532 CGATTGAGCATGTGATTTTAAGATACA 58.662 33.333 0.00 0.00 0.00 2.29
2691 2828 8.551205 TCGATTGAGCATGTGATTTTAAGATAC 58.449 33.333 0.00 0.00 0.00 2.24
2692 2829 8.661352 TCGATTGAGCATGTGATTTTAAGATA 57.339 30.769 0.00 0.00 0.00 1.98
2704 2841 6.202379 CACAAGATAGAATCGATTGAGCATGT 59.798 38.462 16.96 11.95 0.00 3.21
2800 2937 9.842775 AGCATGAGTGAAGATAGATTGATAAAA 57.157 29.630 0.00 0.00 0.00 1.52
2805 2942 9.842775 AAATTAGCATGAGTGAAGATAGATTGA 57.157 29.630 0.00 0.00 0.00 2.57
2808 2945 9.624373 ACAAAATTAGCATGAGTGAAGATAGAT 57.376 29.630 0.00 0.00 0.00 1.98
2809 2946 9.102757 GACAAAATTAGCATGAGTGAAGATAGA 57.897 33.333 0.00 0.00 0.00 1.98
2810 2947 8.886719 TGACAAAATTAGCATGAGTGAAGATAG 58.113 33.333 0.00 0.00 0.00 2.08
2811 2948 8.791327 TGACAAAATTAGCATGAGTGAAGATA 57.209 30.769 0.00 0.00 0.00 1.98
2812 2949 7.692460 TGACAAAATTAGCATGAGTGAAGAT 57.308 32.000 0.00 0.00 0.00 2.40
2813 2950 7.509141 TTGACAAAATTAGCATGAGTGAAGA 57.491 32.000 0.00 0.00 0.00 2.87
2948 3085 4.609691 TCGTTGACAGTTTTCAAAGGAC 57.390 40.909 0.00 0.00 37.24 3.85
3018 3155 8.412608 ACATCTGATTAGAACTACGAACAATG 57.587 34.615 0.00 0.00 36.32 2.82
3150 3293 6.318900 TCTGTCTCTCTCGAGCAAATATTGTA 59.681 38.462 7.81 0.00 37.19 2.41
3180 3323 6.149142 ACAAGCTTTCTTAGAGAAATGCAGAG 59.851 38.462 18.17 12.85 42.66 3.35
3195 3734 9.601217 AACTATTGTATAATCGACAAGCTTTCT 57.399 29.630 0.00 0.00 40.01 2.52
3196 3735 9.638300 CAACTATTGTATAATCGACAAGCTTTC 57.362 33.333 0.00 0.00 40.01 2.62
3217 3756 6.418057 AATGCATTGGAAAAAGGACAACTA 57.582 33.333 12.09 0.00 0.00 2.24
3221 3760 5.070981 TGGTAAATGCATTGGAAAAAGGACA 59.929 36.000 13.82 0.00 0.00 4.02
3273 3812 4.952957 TCTGATTCTCCACTCTACTTCAGG 59.047 45.833 0.00 0.00 32.27 3.86
3301 3843 6.808321 TCTACCCTTAATGAGTACAAGCAT 57.192 37.500 0.00 0.00 0.00 3.79
3365 3912 9.677567 TTGAGAAGTAAATATGAAAGCACAAAC 57.322 29.630 0.00 0.00 0.00 2.93
3403 3950 3.826524 TGCTATTGAAGTGTGGTTCCAA 58.173 40.909 0.00 0.00 0.00 3.53
3659 4207 7.334421 CGGATCATATCAAGTGGTTAATAAGGG 59.666 40.741 0.00 0.00 0.00 3.95
3738 4286 1.294426 TAGGATGGGACGGAGGGAGT 61.294 60.000 0.00 0.00 0.00 3.85
3739 4287 0.540830 CTAGGATGGGACGGAGGGAG 60.541 65.000 0.00 0.00 0.00 4.30
3740 4288 1.294426 ACTAGGATGGGACGGAGGGA 61.294 60.000 0.00 0.00 0.00 4.20
3742 4290 1.749334 GCACTAGGATGGGACGGAGG 61.749 65.000 0.00 0.00 0.00 4.30
3743 4291 1.043116 TGCACTAGGATGGGACGGAG 61.043 60.000 0.00 0.00 0.00 4.63
3744 4292 1.001120 TGCACTAGGATGGGACGGA 59.999 57.895 0.00 0.00 0.00 4.69
3747 4295 0.905357 ACACTGCACTAGGATGGGAC 59.095 55.000 0.00 0.00 0.00 4.46
3749 4297 0.904649 TGACACTGCACTAGGATGGG 59.095 55.000 0.00 0.00 0.00 4.00
3771 4615 4.157289 TCCGTCCCATAATATAAGAGCGTC 59.843 45.833 0.00 0.00 0.00 5.19
3782 4626 2.047830 GAACTCCCTCCGTCCCATAAT 58.952 52.381 0.00 0.00 0.00 1.28
3805 4652 4.382320 GCGTCGGGCAGTGGGTAA 62.382 66.667 0.00 0.00 42.87 2.85
4102 4949 0.406361 TTTGGCATACCCGAAACCCT 59.594 50.000 0.00 0.00 33.89 4.34
4176 5058 7.271511 TCAGGTAAGCAATCAAACACAAATTT 58.728 30.769 0.00 0.00 0.00 1.82
4179 5061 5.843673 TCAGGTAAGCAATCAAACACAAA 57.156 34.783 0.00 0.00 0.00 2.83
4211 5093 7.239773 AGCCCCTACAATATACCATAAGAACAT 59.760 37.037 0.00 0.00 0.00 2.71
4282 5172 7.654520 GCAATATGCTTATATATGGGGCAATTG 59.345 37.037 20.47 20.47 40.96 2.32
4400 5511 1.837051 TCAGTTGCACCCGACTCCT 60.837 57.895 0.00 0.00 33.29 3.69
4455 5567 0.370273 CAAGTAACCGCGCTCATCAC 59.630 55.000 5.56 0.00 0.00 3.06
4608 5725 2.760634 TTCGGTTCTGCTGATAAGCA 57.239 45.000 4.22 4.22 43.22 3.91
4656 5781 6.318648 CCCAATTTATTCCTCAATCAGTTCGA 59.681 38.462 0.00 0.00 0.00 3.71
4687 5812 1.304879 GGTGGCCAAAGGGTGCATA 60.305 57.895 7.24 0.00 36.17 3.14
4740 5881 6.127647 ACACAATTATGCGGATCAGAAAATGT 60.128 34.615 0.00 0.00 33.31 2.71
5101 6274 1.468914 GATCCAGGGAAAAGAACACGC 59.531 52.381 0.00 0.00 0.00 5.34
5139 6312 3.429141 TCGTCTCCGTCAGTCGCC 61.429 66.667 0.00 0.00 38.35 5.54
5167 6340 0.970937 ATGGTCGACACCCATCGTCT 60.971 55.000 18.91 0.00 42.99 4.18
5246 6420 4.473199 ACACGACGGTCATGAATATATCG 58.527 43.478 11.58 5.81 0.00 2.92
5283 6457 6.341316 GGAATATGTGCTTTCACTCTCAGTA 58.659 40.000 0.00 0.00 43.49 2.74
5305 6479 1.546923 CCTATACACACACACACCGGA 59.453 52.381 9.46 0.00 0.00 5.14
5310 6484 6.334989 GCAATAGTACCTATACACACACACA 58.665 40.000 0.00 0.00 33.30 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.