Multiple sequence alignment - TraesCS3B01G328800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G328800 chr3B 100.000 4351 0 0 1 4351 531214392 531210042 0.000000e+00 8035
1 TraesCS3B01G328800 chr3A 92.249 3019 135 44 753 3732 527841316 527838358 0.000000e+00 4187
2 TraesCS3B01G328800 chr3A 86.292 766 77 10 3 759 527842209 527841463 0.000000e+00 808
3 TraesCS3B01G328800 chr3A 93.277 119 7 1 4087 4204 527838194 527838076 1.610000e-39 174
4 TraesCS3B01G328800 chr3A 83.146 178 14 6 3758 3920 527838365 527838189 9.750000e-32 148
5 TraesCS3B01G328800 chr3D 93.737 1980 80 27 1777 3742 405310316 405308367 0.000000e+00 2929
6 TraesCS3B01G328800 chr3D 92.159 1033 55 11 753 1773 405312936 405311918 0.000000e+00 1435
7 TraesCS3B01G328800 chr3D 90.698 430 31 5 336 759 405313509 405313083 8.170000e-157 564
8 TraesCS3B01G328800 chr3D 92.500 120 7 2 4087 4204 405308215 405308096 2.080000e-38 171
9 TraesCS3B01G328800 chr1A 83.923 311 50 0 2055 2365 462796271 462795961 9.150000e-77 298
10 TraesCS3B01G328800 chr1D 83.601 311 51 0 2055 2365 363725692 363725382 4.260000e-75 292
11 TraesCS3B01G328800 chr1B 82.637 311 54 0 2055 2365 486971810 486971500 4.290000e-70 276
12 TraesCS3B01G328800 chr2A 79.605 304 58 4 2065 2366 550702024 550701723 9.480000e-52 215
13 TraesCS3B01G328800 chrUn 79.479 307 53 7 2065 2366 276463194 276462893 4.410000e-50 209
14 TraesCS3B01G328800 chrUn 79.114 316 56 7 2056 2366 276527303 276527613 4.410000e-50 209
15 TraesCS3B01G328800 chr2D 79.114 316 56 7 2056 2366 437948152 437948462 4.410000e-50 209


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G328800 chr3B 531210042 531214392 4350 True 8035.00 8035 100.0000 1 4351 1 chr3B.!!$R1 4350
1 TraesCS3B01G328800 chr3A 527838076 527842209 4133 True 1329.25 4187 88.7410 3 4204 4 chr3A.!!$R1 4201
2 TraesCS3B01G328800 chr3D 405308096 405313509 5413 True 1274.75 2929 92.2735 336 4204 4 chr3D.!!$R1 3868

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
322 330 0.313672 TTTGTTTGCGACATCCCTGC 59.686 50.0 0.00 0.0 38.26 4.85 F
1455 1641 0.598158 GTGCCCTACGTCGACAACAA 60.598 55.0 17.16 0.0 0.00 2.83 F
1718 1911 0.034896 TCGGCCTCAAGTTCCTCAAC 59.965 55.0 0.00 0.0 0.00 3.18 F
2820 4634 0.750850 TAGCAGGTAACGGAGATGGC 59.249 55.0 0.00 0.0 46.39 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1519 1706 0.325933 TAACGTCTCGACCCTGAGGA 59.674 55.0 0.0 0.0 36.61 3.71 R
2801 4615 0.750850 GCCATCTCCGTTACCTGCTA 59.249 55.0 0.0 0.0 0.00 3.49 R
3194 5013 0.821711 GCTTGTTGCACAGTACCCCA 60.822 55.0 0.0 0.0 42.31 4.96 R
4080 5916 0.031585 GGGTGCTCCAAAAACCGTTC 59.968 55.0 7.2 0.0 34.62 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.554636 CGATTCTCATTTAGACACACTTGC 58.445 41.667 0.00 0.00 32.51 4.01
33 34 8.577939 CATTTAGACACACTTGCAATATTTTCG 58.422 33.333 0.00 0.00 0.00 3.46
34 35 5.689383 AGACACACTTGCAATATTTTCGT 57.311 34.783 0.00 0.00 0.00 3.85
42 43 6.803320 CACTTGCAATATTTTCGTCTTCACAT 59.197 34.615 0.00 0.00 0.00 3.21
44 45 6.493449 TGCAATATTTTCGTCTTCACATCA 57.507 33.333 0.00 0.00 0.00 3.07
45 46 7.087409 TGCAATATTTTCGTCTTCACATCAT 57.913 32.000 0.00 0.00 0.00 2.45
72 73 3.428045 GCTTTGGATCGCAAATAGCTTGT 60.428 43.478 0.00 0.00 42.61 3.16
82 83 4.781528 CGCAAATAGCTTGTACGAACTTTC 59.218 41.667 0.00 0.00 42.61 2.62
91 92 5.854866 GCTTGTACGAACTTTCCAATAAACC 59.145 40.000 0.00 0.00 0.00 3.27
123 124 6.870439 AGATGCAAAAACCATTTTCTAAGCTC 59.130 34.615 0.00 0.00 36.62 4.09
124 125 5.296748 TGCAAAAACCATTTTCTAAGCTCC 58.703 37.500 0.00 0.00 36.62 4.70
135 136 4.873746 TTCTAAGCTCCTTATGGGATCG 57.126 45.455 0.00 0.00 44.15 3.69
136 137 4.114015 TCTAAGCTCCTTATGGGATCGA 57.886 45.455 0.00 0.00 44.15 3.59
139 140 6.436027 TCTAAGCTCCTTATGGGATCGATAT 58.564 40.000 0.00 0.00 44.15 1.63
151 152 6.740944 TGGGATCGATATTCTTACTTCCAA 57.259 37.500 0.00 0.00 0.00 3.53
159 160 9.798994 TCGATATTCTTACTTCCAAAAGTCTAC 57.201 33.333 0.00 0.00 44.64 2.59
174 175 5.793030 AAGTCTACATCTGTACCCTATGC 57.207 43.478 0.00 0.00 0.00 3.14
175 176 4.804597 AGTCTACATCTGTACCCTATGCA 58.195 43.478 0.00 0.00 0.00 3.96
176 177 5.398236 AGTCTACATCTGTACCCTATGCAT 58.602 41.667 3.79 3.79 0.00 3.96
179 180 6.425114 GTCTACATCTGTACCCTATGCATTTG 59.575 42.308 3.54 0.00 0.00 2.32
232 239 4.170062 CGCGCCTTGGTGCATCAG 62.170 66.667 22.66 4.94 0.00 2.90
236 243 2.277591 GCCTTGGTGCATCAGCCAA 61.278 57.895 0.00 2.77 41.90 4.52
244 251 0.323999 TGCATCAGCCAATCCAAGCT 60.324 50.000 0.00 0.00 41.13 3.74
287 294 1.294780 GCCCTGCATCCCTCGATAG 59.705 63.158 0.00 0.00 0.00 2.08
305 313 1.807814 AGCCCCTACGATCTCCATTT 58.192 50.000 0.00 0.00 0.00 2.32
306 314 1.417890 AGCCCCTACGATCTCCATTTG 59.582 52.381 0.00 0.00 0.00 2.32
308 316 2.421529 GCCCCTACGATCTCCATTTGTT 60.422 50.000 0.00 0.00 0.00 2.83
309 317 3.886123 CCCCTACGATCTCCATTTGTTT 58.114 45.455 0.00 0.00 0.00 2.83
310 318 3.627577 CCCCTACGATCTCCATTTGTTTG 59.372 47.826 0.00 0.00 0.00 2.93
311 319 3.065371 CCCTACGATCTCCATTTGTTTGC 59.935 47.826 0.00 0.00 0.00 3.68
312 320 2.900122 ACGATCTCCATTTGTTTGCG 57.100 45.000 0.00 0.00 0.00 4.85
313 321 2.422597 ACGATCTCCATTTGTTTGCGA 58.577 42.857 0.00 0.00 0.00 5.10
315 323 2.159430 CGATCTCCATTTGTTTGCGACA 59.841 45.455 0.00 0.00 36.19 4.35
316 324 3.181507 CGATCTCCATTTGTTTGCGACAT 60.182 43.478 0.00 0.00 38.26 3.06
318 326 2.487762 TCTCCATTTGTTTGCGACATCC 59.512 45.455 0.00 0.00 38.26 3.51
319 327 1.543802 TCCATTTGTTTGCGACATCCC 59.456 47.619 0.00 0.00 38.26 3.85
320 328 1.545582 CCATTTGTTTGCGACATCCCT 59.454 47.619 0.00 0.00 38.26 4.20
321 329 2.598589 CATTTGTTTGCGACATCCCTG 58.401 47.619 0.00 0.00 38.26 4.45
322 330 0.313672 TTTGTTTGCGACATCCCTGC 59.686 50.000 0.00 0.00 38.26 4.85
323 331 0.821301 TTGTTTGCGACATCCCTGCA 60.821 50.000 0.00 0.00 38.26 4.41
324 332 1.210155 GTTTGCGACATCCCTGCAC 59.790 57.895 0.00 0.00 38.55 4.57
329 337 1.599047 CGACATCCCTGCACCTCTT 59.401 57.895 0.00 0.00 0.00 2.85
346 354 3.245052 CCTCTTCTGAACCCATCAACCTT 60.245 47.826 0.00 0.00 37.67 3.50
361 369 2.711922 CCTTCGACTCCCCTCCACG 61.712 68.421 0.00 0.00 0.00 4.94
386 394 3.743269 CGACACCACTACCAAGTTTTCCT 60.743 47.826 0.00 0.00 31.97 3.36
420 428 2.727544 CTAGCTCAGCCTCGCCTC 59.272 66.667 0.00 0.00 0.00 4.70
426 434 2.443016 CAGCCTCGCCTCCTACCT 60.443 66.667 0.00 0.00 0.00 3.08
459 468 1.228894 AGTCCTTGTCTCCGCCTCA 60.229 57.895 0.00 0.00 0.00 3.86
486 495 1.365633 GGCAAAATTGACCGGCACA 59.634 52.632 0.00 0.00 0.00 4.57
559 568 7.259882 ACATTACCTAATATTTGACGTGACGA 58.740 34.615 13.70 0.00 0.00 4.20
560 569 7.434307 ACATTACCTAATATTTGACGTGACGAG 59.566 37.037 13.70 0.00 0.00 4.18
593 603 4.032960 TGTAATTCCTGTCTTGCATGGT 57.967 40.909 0.00 0.00 0.00 3.55
603 613 6.095300 TCCTGTCTTGCATGGTATTATTTGTG 59.905 38.462 0.00 0.00 0.00 3.33
616 627 8.052748 TGGTATTATTTGTGCCACTTAAGAGAT 58.947 33.333 10.09 0.00 0.00 2.75
627 638 6.551227 TGCCACTTAAGAGATAGCATCTTCTA 59.449 38.462 10.09 0.00 40.38 2.10
637 648 5.541868 AGATAGCATCTTCTAAGCCTTAGCA 59.458 40.000 6.61 0.00 37.74 3.49
638 649 4.494091 AGCATCTTCTAAGCCTTAGCAA 57.506 40.909 6.61 2.21 43.56 3.91
668 679 6.877236 AGACAAACAACAAATTTCATGAGGT 58.123 32.000 0.00 2.64 0.00 3.85
977 1153 1.002868 CCAACAGTCCAGCTCCAGG 60.003 63.158 0.00 0.00 0.00 4.45
1015 1191 1.156736 CGAAATGGCACGTTCTTCCT 58.843 50.000 10.13 0.00 0.00 3.36
1085 1261 2.342279 CAGGACCGGCGAGTTCAA 59.658 61.111 9.30 0.00 0.00 2.69
1116 1292 2.669133 CCCCAACGATCTCCTGCCA 61.669 63.158 0.00 0.00 0.00 4.92
1122 1298 1.664017 CGATCTCCTGCCATCGCTG 60.664 63.158 0.00 0.00 35.84 5.18
1173 1349 0.801251 GCAAGCTCAGCAAGTACCTG 59.199 55.000 0.00 0.00 0.00 4.00
1237 1417 1.215014 TTGCTTCACTCAGTCGCGTG 61.215 55.000 5.77 0.00 0.00 5.34
1248 1428 2.357952 TCAGTCGCGTGCTGTTAGATAT 59.642 45.455 24.17 0.00 35.60 1.63
1251 1431 5.410439 TCAGTCGCGTGCTGTTAGATATATA 59.590 40.000 24.17 6.67 35.60 0.86
1261 1447 5.980116 GCTGTTAGATATATAGGCGGTGATG 59.020 44.000 0.00 0.00 0.00 3.07
1304 1490 2.028930 GTGTGGGAGACGTTTCTGATCT 60.029 50.000 6.02 0.00 29.47 2.75
1358 1544 1.289380 GAGTTCGCGTTCCTGAGGT 59.711 57.895 5.77 0.00 0.00 3.85
1455 1641 0.598158 GTGCCCTACGTCGACAACAA 60.598 55.000 17.16 0.00 0.00 2.83
1519 1706 3.376546 GGTGCTACTGCTACTACGTACTT 59.623 47.826 0.00 0.00 40.48 2.24
1526 1713 3.276857 TGCTACTACGTACTTCCTCAGG 58.723 50.000 0.00 0.00 0.00 3.86
1535 1722 0.961358 ACTTCCTCAGGGTCGAGACG 60.961 60.000 0.00 0.00 34.79 4.18
1539 1726 0.733729 CCTCAGGGTCGAGACGTTAG 59.266 60.000 0.00 0.00 34.79 2.34
1718 1911 0.034896 TCGGCCTCAAGTTCCTCAAC 59.965 55.000 0.00 0.00 0.00 3.18
1776 1969 7.729124 TCCTTATTTGCAAGGTACTACTAGT 57.271 36.000 0.00 0.00 44.68 2.57
1839 3630 5.914898 ATACCAAGCTAAAAATGGTCACC 57.085 39.130 10.30 0.00 43.90 4.02
1868 3659 9.205719 TCAGTACGTGCAACTTAATTAACAATA 57.794 29.630 6.38 0.00 31.75 1.90
1979 3770 5.660460 GTCCAGATTCTCTCTTCCTTTCTC 58.340 45.833 0.00 0.00 29.16 2.87
1980 3771 5.422012 GTCCAGATTCTCTCTTCCTTTCTCT 59.578 44.000 0.00 0.00 29.16 3.10
1982 3773 5.187576 CCAGATTCTCTCTTCCTTTCTCTGT 59.812 44.000 0.00 0.00 29.16 3.41
1983 3774 6.379703 CCAGATTCTCTCTTCCTTTCTCTGTA 59.620 42.308 0.00 0.00 29.16 2.74
1984 3775 7.416664 CCAGATTCTCTCTTCCTTTCTCTGTAG 60.417 44.444 0.00 0.00 29.16 2.74
1985 3776 7.122650 CAGATTCTCTCTTCCTTTCTCTGTAGT 59.877 40.741 0.00 0.00 29.16 2.73
1986 3777 8.333235 AGATTCTCTCTTCCTTTCTCTGTAGTA 58.667 37.037 0.00 0.00 0.00 1.82
1987 3778 7.690952 TTCTCTCTTCCTTTCTCTGTAGTAC 57.309 40.000 0.00 0.00 0.00 2.73
1988 3779 6.181908 TCTCTCTTCCTTTCTCTGTAGTACC 58.818 44.000 0.00 0.00 0.00 3.34
1990 3781 5.711036 TCTCTTCCTTTCTCTGTAGTACCAC 59.289 44.000 0.00 0.00 0.00 4.16
1991 3782 4.771054 TCTTCCTTTCTCTGTAGTACCACC 59.229 45.833 0.00 0.00 0.00 4.61
1992 3783 3.087031 TCCTTTCTCTGTAGTACCACCG 58.913 50.000 0.00 0.00 0.00 4.94
1993 3784 2.824341 CCTTTCTCTGTAGTACCACCGT 59.176 50.000 0.00 0.00 0.00 4.83
2372 4163 1.302033 CAGCCGCACCAGAGACTTT 60.302 57.895 0.00 0.00 0.00 2.66
2380 4171 2.985139 GCACCAGAGACTTTGTACGTAC 59.015 50.000 18.90 18.90 0.00 3.67
2393 4184 6.921857 ACTTTGTACGTACTATATGCATCCAC 59.078 38.462 25.12 0.00 0.00 4.02
2394 4185 5.381174 TGTACGTACTATATGCATCCACC 57.619 43.478 25.12 0.00 0.00 4.61
2395 4186 4.828387 TGTACGTACTATATGCATCCACCA 59.172 41.667 25.12 0.00 0.00 4.17
2396 4187 5.479027 TGTACGTACTATATGCATCCACCAT 59.521 40.000 25.12 0.00 0.00 3.55
2397 4188 5.073311 ACGTACTATATGCATCCACCATC 57.927 43.478 0.19 0.00 0.00 3.51
2398 4189 4.081642 ACGTACTATATGCATCCACCATCC 60.082 45.833 0.19 0.00 0.00 3.51
2412 4217 3.355378 CACCATCCATTCCAAACTAGCA 58.645 45.455 0.00 0.00 0.00 3.49
2415 4220 4.209538 CCATCCATTCCAAACTAGCATCA 58.790 43.478 0.00 0.00 0.00 3.07
2419 4224 6.252599 TCCATTCCAAACTAGCATCATACT 57.747 37.500 0.00 0.00 0.00 2.12
2426 4231 5.235186 CCAAACTAGCATCATACTACTGCAC 59.765 44.000 0.00 0.00 38.37 4.57
2432 4237 3.388308 CATCATACTACTGCACTGCTCC 58.612 50.000 1.98 0.00 0.00 4.70
2528 4337 4.143333 GCGGCGAGGAACCAGCTA 62.143 66.667 12.98 0.00 0.00 3.32
2714 4523 1.004745 GTCTCCCCAAGCTTCATCCAA 59.995 52.381 0.00 0.00 0.00 3.53
2776 4590 1.473434 GGAATGGAAGGGTACTCGCAG 60.473 57.143 0.00 0.00 0.00 5.18
2779 4593 2.447408 TGGAAGGGTACTCGCAGATA 57.553 50.000 0.00 0.00 33.89 1.98
2780 4594 2.307768 TGGAAGGGTACTCGCAGATAG 58.692 52.381 0.00 0.00 33.89 2.08
2781 4595 2.092049 TGGAAGGGTACTCGCAGATAGA 60.092 50.000 0.00 0.00 33.89 1.98
2794 4608 8.594881 ACTCGCAGATAGAGTATTAAATTTGG 57.405 34.615 0.00 0.00 46.06 3.28
2795 4609 8.204836 ACTCGCAGATAGAGTATTAAATTTGGT 58.795 33.333 0.00 0.00 46.06 3.67
2796 4610 8.958119 TCGCAGATAGAGTATTAAATTTGGTT 57.042 30.769 0.00 0.00 0.00 3.67
2797 4611 9.042008 TCGCAGATAGAGTATTAAATTTGGTTC 57.958 33.333 0.00 0.00 0.00 3.62
2820 4634 0.750850 TAGCAGGTAACGGAGATGGC 59.249 55.000 0.00 0.00 46.39 4.40
2845 4659 1.002773 GAGTACTTCGCCCCAAAGGAA 59.997 52.381 0.00 0.00 38.24 3.36
3073 4891 2.819608 CGGGTTCATGACTTGACCAAAT 59.180 45.455 14.71 0.00 32.84 2.32
3194 5013 1.413808 GGAGGACTGCTAGGGGAGATT 60.414 57.143 0.00 0.00 34.86 2.40
3308 5127 4.012374 TCATCCAGGAAAATGCAGAAGAC 58.988 43.478 0.00 0.00 0.00 3.01
3314 5133 1.196808 GAAAATGCAGAAGACGGCGAA 59.803 47.619 16.62 0.00 39.90 4.70
3377 5196 3.554337 CGTGCACCCTATCAAGGTATACC 60.554 52.174 14.54 14.54 41.89 2.73
3439 5258 8.877864 ACCAAAATTGAAGTATGGAACTATGA 57.122 30.769 0.00 0.00 37.50 2.15
3521 5340 2.415512 GCCTATTGAAGAACGCGACTTT 59.584 45.455 15.93 2.82 0.00 2.66
3555 5374 3.816994 ACAGTTTAAGTGTCCAAGACCC 58.183 45.455 0.00 0.00 0.00 4.46
3557 5376 2.148768 GTTTAAGTGTCCAAGACCCCG 58.851 52.381 0.00 0.00 0.00 5.73
3604 5423 4.824289 ACGGGTGTAACGAGTGAAATAAT 58.176 39.130 0.00 0.00 38.12 1.28
3609 5428 7.019418 GGGTGTAACGAGTGAAATAATTGTTC 58.981 38.462 0.00 0.00 38.12 3.18
3619 5438 9.774742 GAGTGAAATAATTGTTCATTGTACTCC 57.225 33.333 8.97 0.00 37.34 3.85
3651 5470 7.179338 AGTTAATTTGCACCATGTAATTGGGTA 59.821 33.333 2.72 0.00 41.35 3.69
3654 5473 3.767711 TGCACCATGTAATTGGGTACAA 58.232 40.909 0.00 0.00 41.35 2.41
3669 5488 3.451526 GGTACAAGATAACGGTGCTACC 58.548 50.000 0.00 0.00 34.05 3.18
3672 5491 4.216411 ACAAGATAACGGTGCTACCAAT 57.784 40.909 6.21 0.00 38.47 3.16
3688 5507 2.439507 ACCAATGATATCGAGGCCAACT 59.560 45.455 5.01 0.00 0.00 3.16
3691 5510 3.963428 ATGATATCGAGGCCAACTACC 57.037 47.619 5.01 0.00 0.00 3.18
3714 5533 2.877786 TCGTTGCAATGACTCACAACAT 59.122 40.909 17.41 0.00 41.90 2.71
3725 5544 6.353404 TGACTCACAACATGTATTCACCTA 57.647 37.500 0.00 0.00 0.00 3.08
3726 5545 6.764379 TGACTCACAACATGTATTCACCTAA 58.236 36.000 0.00 0.00 0.00 2.69
3727 5546 7.394016 TGACTCACAACATGTATTCACCTAAT 58.606 34.615 0.00 0.00 0.00 1.73
3728 5547 7.549134 TGACTCACAACATGTATTCACCTAATC 59.451 37.037 0.00 0.00 0.00 1.75
3729 5548 7.394016 ACTCACAACATGTATTCACCTAATCA 58.606 34.615 0.00 0.00 0.00 2.57
3730 5549 7.334421 ACTCACAACATGTATTCACCTAATCAC 59.666 37.037 0.00 0.00 0.00 3.06
3731 5550 6.597672 TCACAACATGTATTCACCTAATCACC 59.402 38.462 0.00 0.00 0.00 4.02
3732 5551 6.374053 CACAACATGTATTCACCTAATCACCA 59.626 38.462 0.00 0.00 0.00 4.17
3733 5552 7.067372 CACAACATGTATTCACCTAATCACCAT 59.933 37.037 0.00 0.00 0.00 3.55
3734 5553 7.283127 ACAACATGTATTCACCTAATCACCATC 59.717 37.037 0.00 0.00 0.00 3.51
3735 5554 6.299141 ACATGTATTCACCTAATCACCATCC 58.701 40.000 0.00 0.00 0.00 3.51
3736 5555 5.966853 TGTATTCACCTAATCACCATCCA 57.033 39.130 0.00 0.00 0.00 3.41
3737 5556 5.928976 TGTATTCACCTAATCACCATCCAG 58.071 41.667 0.00 0.00 0.00 3.86
3738 5557 5.428457 TGTATTCACCTAATCACCATCCAGT 59.572 40.000 0.00 0.00 0.00 4.00
3739 5558 4.927267 TTCACCTAATCACCATCCAGTT 57.073 40.909 0.00 0.00 0.00 3.16
3740 5559 4.487714 TCACCTAATCACCATCCAGTTC 57.512 45.455 0.00 0.00 0.00 3.01
3741 5560 4.104086 TCACCTAATCACCATCCAGTTCT 58.896 43.478 0.00 0.00 0.00 3.01
3742 5561 4.536090 TCACCTAATCACCATCCAGTTCTT 59.464 41.667 0.00 0.00 0.00 2.52
3743 5562 5.014123 TCACCTAATCACCATCCAGTTCTTT 59.986 40.000 0.00 0.00 0.00 2.52
3744 5563 5.711976 CACCTAATCACCATCCAGTTCTTTT 59.288 40.000 0.00 0.00 0.00 2.27
3745 5564 6.209391 CACCTAATCACCATCCAGTTCTTTTT 59.791 38.462 0.00 0.00 0.00 1.94
3796 5615 1.821332 TGCACACAACCATGCACGA 60.821 52.632 0.00 0.00 46.63 4.35
3824 5645 6.460781 TGTAATCACATAAAGGTTGTCGACT 58.539 36.000 17.92 0.00 0.00 4.18
3825 5646 6.588756 TGTAATCACATAAAGGTTGTCGACTC 59.411 38.462 17.92 9.74 0.00 3.36
3826 5647 3.921677 TCACATAAAGGTTGTCGACTCC 58.078 45.455 17.92 17.99 0.00 3.85
3827 5648 3.322541 TCACATAAAGGTTGTCGACTCCA 59.677 43.478 24.20 10.58 0.00 3.86
3828 5649 3.432252 CACATAAAGGTTGTCGACTCCAC 59.568 47.826 24.20 15.50 0.00 4.02
3829 5650 3.323979 ACATAAAGGTTGTCGACTCCACT 59.676 43.478 24.20 15.99 0.00 4.00
3830 5651 2.528041 AAAGGTTGTCGACTCCACTC 57.472 50.000 24.20 11.03 0.00 3.51
3831 5652 0.680061 AAGGTTGTCGACTCCACTCC 59.320 55.000 24.20 14.44 0.00 3.85
3844 5680 0.804989 CCACTCCGTGAAAATCAGCC 59.195 55.000 0.00 0.00 35.23 4.85
3882 5718 4.499696 CCACTTTAAAGCAGTTTCACCCAG 60.500 45.833 15.24 0.00 0.00 4.45
3893 5729 0.550914 TTCACCCAGGAGTTGCACTT 59.449 50.000 0.00 0.00 0.00 3.16
3901 5737 4.156008 CCCAGGAGTTGCACTTTAACATAC 59.844 45.833 0.00 0.00 0.00 2.39
3905 5741 5.240844 AGGAGTTGCACTTTAACATACAACC 59.759 40.000 0.00 0.00 38.47 3.77
3906 5742 5.103290 AGTTGCACTTTAACATACAACCG 57.897 39.130 0.00 0.00 38.47 4.44
3915 5751 9.325150 CACTTTAACATACAACCGTTTATCTTG 57.675 33.333 0.00 0.00 0.00 3.02
3920 5756 7.266922 ACATACAACCGTTTATCTTGTTTGT 57.733 32.000 0.00 0.00 36.12 2.83
3921 5757 7.357303 ACATACAACCGTTTATCTTGTTTGTC 58.643 34.615 0.00 0.00 36.14 3.18
3922 5758 7.227910 ACATACAACCGTTTATCTTGTTTGTCT 59.772 33.333 0.00 0.00 36.14 3.41
3923 5759 6.445357 ACAACCGTTTATCTTGTTTGTCTT 57.555 33.333 0.00 0.00 0.00 3.01
3925 5761 5.684550 ACCGTTTATCTTGTTTGTCTTCC 57.315 39.130 0.00 0.00 0.00 3.46
3926 5762 4.517832 ACCGTTTATCTTGTTTGTCTTCCC 59.482 41.667 0.00 0.00 0.00 3.97
3927 5763 4.378046 CCGTTTATCTTGTTTGTCTTCCCG 60.378 45.833 0.00 0.00 0.00 5.14
3928 5764 4.473199 GTTTATCTTGTTTGTCTTCCCGC 58.527 43.478 0.00 0.00 0.00 6.13
3929 5765 2.568623 ATCTTGTTTGTCTTCCCGCT 57.431 45.000 0.00 0.00 0.00 5.52
3930 5766 3.695830 ATCTTGTTTGTCTTCCCGCTA 57.304 42.857 0.00 0.00 0.00 4.26
3931 5767 3.040147 TCTTGTTTGTCTTCCCGCTAG 57.960 47.619 0.00 0.00 0.00 3.42
3932 5768 1.464997 CTTGTTTGTCTTCCCGCTAGC 59.535 52.381 4.06 4.06 0.00 3.42
3933 5769 0.685097 TGTTTGTCTTCCCGCTAGCT 59.315 50.000 13.93 0.00 0.00 3.32
3934 5770 1.337823 TGTTTGTCTTCCCGCTAGCTC 60.338 52.381 13.93 0.00 0.00 4.09
3935 5771 0.249398 TTTGTCTTCCCGCTAGCTCC 59.751 55.000 13.93 0.00 0.00 4.70
3936 5772 0.614979 TTGTCTTCCCGCTAGCTCCT 60.615 55.000 13.93 0.00 0.00 3.69
3937 5773 1.323271 TGTCTTCCCGCTAGCTCCTG 61.323 60.000 13.93 0.00 0.00 3.86
3938 5774 1.000486 TCTTCCCGCTAGCTCCTGT 60.000 57.895 13.93 0.00 0.00 4.00
3939 5775 0.614979 TCTTCCCGCTAGCTCCTGTT 60.615 55.000 13.93 0.00 0.00 3.16
3940 5776 0.250513 CTTCCCGCTAGCTCCTGTTT 59.749 55.000 13.93 0.00 0.00 2.83
3941 5777 0.690762 TTCCCGCTAGCTCCTGTTTT 59.309 50.000 13.93 0.00 0.00 2.43
3942 5778 0.249398 TCCCGCTAGCTCCTGTTTTC 59.751 55.000 13.93 0.00 0.00 2.29
3943 5779 0.036388 CCCGCTAGCTCCTGTTTTCA 60.036 55.000 13.93 0.00 0.00 2.69
3944 5780 1.407437 CCCGCTAGCTCCTGTTTTCAT 60.407 52.381 13.93 0.00 0.00 2.57
3945 5781 2.158957 CCCGCTAGCTCCTGTTTTCATA 60.159 50.000 13.93 0.00 0.00 2.15
3946 5782 3.126831 CCGCTAGCTCCTGTTTTCATAG 58.873 50.000 13.93 0.00 0.00 2.23
3947 5783 3.430929 CCGCTAGCTCCTGTTTTCATAGT 60.431 47.826 13.93 0.00 0.00 2.12
3948 5784 4.184629 CGCTAGCTCCTGTTTTCATAGTT 58.815 43.478 13.93 0.00 0.00 2.24
3949 5785 4.033358 CGCTAGCTCCTGTTTTCATAGTTG 59.967 45.833 13.93 0.00 0.00 3.16
3950 5786 5.178797 GCTAGCTCCTGTTTTCATAGTTGA 58.821 41.667 7.70 0.00 0.00 3.18
3951 5787 5.293079 GCTAGCTCCTGTTTTCATAGTTGAG 59.707 44.000 7.70 0.00 32.27 3.02
3952 5788 5.489792 AGCTCCTGTTTTCATAGTTGAGA 57.510 39.130 0.00 0.00 32.27 3.27
3953 5789 5.869579 AGCTCCTGTTTTCATAGTTGAGAA 58.130 37.500 0.00 0.00 32.27 2.87
3954 5790 5.703130 AGCTCCTGTTTTCATAGTTGAGAAC 59.297 40.000 3.25 3.25 43.68 3.01
3955 5791 5.703130 GCTCCTGTTTTCATAGTTGAGAACT 59.297 40.000 9.77 0.00 43.74 3.01
3956 5792 6.205658 GCTCCTGTTTTCATAGTTGAGAACTT 59.794 38.462 9.77 0.00 43.74 2.66
3957 5793 7.255277 GCTCCTGTTTTCATAGTTGAGAACTTT 60.255 37.037 9.77 0.00 43.74 2.66
3958 5794 9.273016 CTCCTGTTTTCATAGTTGAGAACTTTA 57.727 33.333 9.77 0.00 43.74 1.85
3959 5795 9.273016 TCCTGTTTTCATAGTTGAGAACTTTAG 57.727 33.333 9.77 1.62 43.74 1.85
3960 5796 9.057089 CCTGTTTTCATAGTTGAGAACTTTAGT 57.943 33.333 9.77 0.00 43.74 2.24
3961 5797 9.869844 CTGTTTTCATAGTTGAGAACTTTAGTG 57.130 33.333 9.77 0.00 43.74 2.74
3962 5798 9.607988 TGTTTTCATAGTTGAGAACTTTAGTGA 57.392 29.630 9.77 0.00 43.74 3.41
3967 5803 9.698309 TCATAGTTGAGAACTTTAGTGAGAAAG 57.302 33.333 0.00 0.00 42.81 2.62
3968 5804 8.930760 CATAGTTGAGAACTTTAGTGAGAAAGG 58.069 37.037 0.00 0.00 42.81 3.11
3969 5805 6.890293 AGTTGAGAACTTTAGTGAGAAAGGT 58.110 36.000 1.38 0.00 39.04 3.50
3976 5812 8.696410 GAACTTTAGTGAGAAAGGTCTATCAG 57.304 38.462 6.68 0.00 45.73 2.90
3977 5813 7.176589 ACTTTAGTGAGAAAGGTCTATCAGG 57.823 40.000 1.38 0.00 40.17 3.86
3978 5814 6.155393 ACTTTAGTGAGAAAGGTCTATCAGGG 59.845 42.308 1.38 0.00 40.17 4.45
3979 5815 3.379452 AGTGAGAAAGGTCTATCAGGGG 58.621 50.000 0.00 0.00 32.80 4.79
3980 5816 3.108376 GTGAGAAAGGTCTATCAGGGGT 58.892 50.000 0.00 0.00 32.80 4.95
3981 5817 3.519913 GTGAGAAAGGTCTATCAGGGGTT 59.480 47.826 0.00 0.00 32.80 4.11
3982 5818 3.519510 TGAGAAAGGTCTATCAGGGGTTG 59.480 47.826 0.00 0.00 32.80 3.77
3983 5819 2.239907 AGAAAGGTCTATCAGGGGTTGC 59.760 50.000 0.00 0.00 29.93 4.17
3984 5820 1.972588 AAGGTCTATCAGGGGTTGCT 58.027 50.000 0.00 0.00 0.00 3.91
3985 5821 1.501582 AGGTCTATCAGGGGTTGCTC 58.498 55.000 0.00 0.00 0.00 4.26
3986 5822 1.008938 AGGTCTATCAGGGGTTGCTCT 59.991 52.381 0.00 0.00 0.00 4.09
3987 5823 1.139853 GGTCTATCAGGGGTTGCTCTG 59.860 57.143 0.00 0.00 0.00 3.35
3988 5824 0.833287 TCTATCAGGGGTTGCTCTGC 59.167 55.000 0.00 0.00 0.00 4.26
3989 5825 0.179034 CTATCAGGGGTTGCTCTGCC 60.179 60.000 0.00 0.00 0.00 4.85
3990 5826 0.913934 TATCAGGGGTTGCTCTGCCA 60.914 55.000 0.00 0.00 0.00 4.92
3991 5827 2.490270 ATCAGGGGTTGCTCTGCCAC 62.490 60.000 0.00 0.00 0.00 5.01
3992 5828 4.335647 AGGGGTTGCTCTGCCACG 62.336 66.667 0.00 0.00 32.36 4.94
4013 5849 4.994756 GCAAGGGGTGGGTGGGTG 62.995 72.222 0.00 0.00 0.00 4.61
4014 5850 4.299796 CAAGGGGTGGGTGGGTGG 62.300 72.222 0.00 0.00 0.00 4.61
4028 5864 4.596585 GTGGGTGGGGTGGTGGTG 62.597 72.222 0.00 0.00 0.00 4.17
4031 5867 2.855014 GGTGGGGTGGTGGTGGTA 60.855 66.667 0.00 0.00 0.00 3.25
4032 5868 2.235761 GGTGGGGTGGTGGTGGTAT 61.236 63.158 0.00 0.00 0.00 2.73
4033 5869 1.301954 GTGGGGTGGTGGTGGTATC 59.698 63.158 0.00 0.00 0.00 2.24
4034 5870 1.926489 TGGGGTGGTGGTGGTATCC 60.926 63.158 0.00 0.00 0.00 2.59
4035 5871 1.926489 GGGGTGGTGGTGGTATCCA 60.926 63.158 0.00 0.00 34.85 3.41
4048 5884 2.691526 TGGTATCCACTTACCAGTAGCG 59.308 50.000 0.00 0.00 45.23 4.26
4049 5885 2.035576 GGTATCCACTTACCAGTAGCGG 59.964 54.545 0.00 0.00 41.18 5.52
4050 5886 1.861982 ATCCACTTACCAGTAGCGGT 58.138 50.000 0.00 0.00 43.46 5.68
4051 5887 0.892755 TCCACTTACCAGTAGCGGTG 59.107 55.000 0.00 0.00 40.39 4.94
4052 5888 0.606604 CCACTTACCAGTAGCGGTGT 59.393 55.000 0.00 0.00 40.39 4.16
4053 5889 1.001633 CCACTTACCAGTAGCGGTGTT 59.998 52.381 0.00 0.00 40.39 3.32
4054 5890 2.066262 CACTTACCAGTAGCGGTGTTG 58.934 52.381 0.00 0.00 40.39 3.33
4055 5891 1.690352 ACTTACCAGTAGCGGTGTTGT 59.310 47.619 0.00 0.00 40.39 3.32
4056 5892 2.066262 CTTACCAGTAGCGGTGTTGTG 58.934 52.381 0.00 0.00 40.39 3.33
4057 5893 1.042229 TACCAGTAGCGGTGTTGTGT 58.958 50.000 0.00 0.00 40.39 3.72
4058 5894 1.042229 ACCAGTAGCGGTGTTGTGTA 58.958 50.000 0.00 0.00 38.07 2.90
4059 5895 1.413445 ACCAGTAGCGGTGTTGTGTAA 59.587 47.619 0.00 0.00 38.07 2.41
4060 5896 2.158928 ACCAGTAGCGGTGTTGTGTAAA 60.159 45.455 0.00 0.00 38.07 2.01
4061 5897 3.071479 CCAGTAGCGGTGTTGTGTAAAT 58.929 45.455 0.00 0.00 0.00 1.40
4062 5898 3.124636 CCAGTAGCGGTGTTGTGTAAATC 59.875 47.826 0.00 0.00 0.00 2.17
4063 5899 3.994392 CAGTAGCGGTGTTGTGTAAATCT 59.006 43.478 0.00 0.00 0.00 2.40
4064 5900 4.091509 CAGTAGCGGTGTTGTGTAAATCTC 59.908 45.833 0.00 0.00 0.00 2.75
4065 5901 2.423577 AGCGGTGTTGTGTAAATCTCC 58.576 47.619 0.00 0.00 0.00 3.71
4066 5902 1.467342 GCGGTGTTGTGTAAATCTCCC 59.533 52.381 0.00 0.00 0.00 4.30
4067 5903 2.773487 CGGTGTTGTGTAAATCTCCCA 58.227 47.619 0.00 0.00 0.00 4.37
4068 5904 2.482721 CGGTGTTGTGTAAATCTCCCAC 59.517 50.000 0.00 0.00 0.00 4.61
4069 5905 2.482721 GGTGTTGTGTAAATCTCCCACG 59.517 50.000 0.00 0.00 31.75 4.94
4070 5906 3.395639 GTGTTGTGTAAATCTCCCACGA 58.604 45.455 0.00 0.00 31.75 4.35
4071 5907 3.432252 GTGTTGTGTAAATCTCCCACGAG 59.568 47.826 0.00 0.00 37.48 4.18
4081 5917 3.830744 TCTCCCACGAGAACTTTTTGA 57.169 42.857 0.00 0.00 42.33 2.69
4082 5918 4.145365 TCTCCCACGAGAACTTTTTGAA 57.855 40.909 0.00 0.00 42.33 2.69
4083 5919 3.875134 TCTCCCACGAGAACTTTTTGAAC 59.125 43.478 0.00 0.00 42.33 3.18
4084 5920 2.610374 TCCCACGAGAACTTTTTGAACG 59.390 45.455 0.00 0.00 0.00 3.95
4085 5921 2.286772 CCCACGAGAACTTTTTGAACGG 60.287 50.000 0.00 0.00 0.00 4.44
4086 5922 2.353579 CCACGAGAACTTTTTGAACGGT 59.646 45.455 0.00 0.00 0.00 4.83
4087 5923 3.181504 CCACGAGAACTTTTTGAACGGTT 60.182 43.478 0.00 0.00 0.00 4.44
4088 5924 4.408694 CACGAGAACTTTTTGAACGGTTT 58.591 39.130 0.00 0.00 0.00 3.27
4089 5925 4.854839 CACGAGAACTTTTTGAACGGTTTT 59.145 37.500 0.00 0.00 0.00 2.43
4090 5926 5.343860 CACGAGAACTTTTTGAACGGTTTTT 59.656 36.000 0.00 0.00 0.00 1.94
4091 5927 5.343860 ACGAGAACTTTTTGAACGGTTTTTG 59.656 36.000 0.00 0.00 0.00 2.44
4092 5928 5.220135 CGAGAACTTTTTGAACGGTTTTTGG 60.220 40.000 0.00 0.00 0.00 3.28
4093 5929 5.785243 AGAACTTTTTGAACGGTTTTTGGA 58.215 33.333 0.00 0.00 0.00 3.53
4094 5930 5.867174 AGAACTTTTTGAACGGTTTTTGGAG 59.133 36.000 0.00 0.00 0.00 3.86
4095 5931 3.930229 ACTTTTTGAACGGTTTTTGGAGC 59.070 39.130 0.00 0.00 0.00 4.70
4096 5932 3.594603 TTTTGAACGGTTTTTGGAGCA 57.405 38.095 0.00 0.00 0.00 4.26
4100 5936 1.730451 AACGGTTTTTGGAGCACCCG 61.730 55.000 0.00 0.00 41.09 5.28
4134 5970 6.853720 TCACGAAAAACAAGGAATTGTACAA 58.146 32.000 11.41 11.41 34.24 2.41
4141 5977 9.665719 AAAAACAAGGAATTGTACAACAGATTT 57.334 25.926 11.22 0.18 34.24 2.17
4204 6041 1.730446 GCTTGCGCTTTTTAGAGCAGG 60.730 52.381 9.73 8.26 44.64 4.85
4205 6042 0.240945 TTGCGCTTTTTAGAGCAGGC 59.759 50.000 9.73 0.00 44.64 4.85
4206 6043 1.137614 GCGCTTTTTAGAGCAGGCC 59.862 57.895 0.00 0.00 42.83 5.19
4207 6044 1.803289 CGCTTTTTAGAGCAGGCCC 59.197 57.895 0.00 0.00 42.83 5.80
4208 6045 0.678048 CGCTTTTTAGAGCAGGCCCT 60.678 55.000 0.00 0.00 42.83 5.19
4209 6046 1.406887 CGCTTTTTAGAGCAGGCCCTA 60.407 52.381 0.00 0.00 42.83 3.53
4210 6047 2.723273 GCTTTTTAGAGCAGGCCCTAA 58.277 47.619 0.00 0.00 42.25 2.69
4211 6048 2.685388 GCTTTTTAGAGCAGGCCCTAAG 59.315 50.000 0.00 0.00 42.25 2.18
4212 6049 3.874193 GCTTTTTAGAGCAGGCCCTAAGT 60.874 47.826 0.00 0.00 42.25 2.24
4213 6050 4.336280 CTTTTTAGAGCAGGCCCTAAGTT 58.664 43.478 0.00 0.00 0.00 2.66
4214 6051 4.382386 TTTTAGAGCAGGCCCTAAGTTT 57.618 40.909 0.00 0.00 0.00 2.66
4215 6052 5.508280 TTTTAGAGCAGGCCCTAAGTTTA 57.492 39.130 0.00 0.00 0.00 2.01
4216 6053 4.482952 TTAGAGCAGGCCCTAAGTTTAC 57.517 45.455 0.00 0.00 0.00 2.01
4217 6054 2.266279 AGAGCAGGCCCTAAGTTTACA 58.734 47.619 0.00 0.00 0.00 2.41
4218 6055 2.846827 AGAGCAGGCCCTAAGTTTACAT 59.153 45.455 0.00 0.00 0.00 2.29
4219 6056 4.037927 AGAGCAGGCCCTAAGTTTACATA 58.962 43.478 0.00 0.00 0.00 2.29
4220 6057 4.473559 AGAGCAGGCCCTAAGTTTACATAA 59.526 41.667 0.00 0.00 0.00 1.90
4221 6058 4.781934 AGCAGGCCCTAAGTTTACATAAG 58.218 43.478 0.00 0.00 0.00 1.73
4222 6059 4.227527 AGCAGGCCCTAAGTTTACATAAGT 59.772 41.667 0.00 0.00 0.00 2.24
4223 6060 5.427481 AGCAGGCCCTAAGTTTACATAAGTA 59.573 40.000 0.00 0.00 0.00 2.24
4224 6061 5.758784 GCAGGCCCTAAGTTTACATAAGTAG 59.241 44.000 0.00 0.00 0.00 2.57
4225 6062 6.407752 GCAGGCCCTAAGTTTACATAAGTAGA 60.408 42.308 0.00 0.00 0.00 2.59
4226 6063 7.689559 GCAGGCCCTAAGTTTACATAAGTAGAT 60.690 40.741 0.00 0.00 0.00 1.98
4227 6064 8.867097 CAGGCCCTAAGTTTACATAAGTAGATA 58.133 37.037 0.00 0.00 0.00 1.98
4228 6065 9.443365 AGGCCCTAAGTTTACATAAGTAGATAA 57.557 33.333 0.00 0.00 0.00 1.75
4229 6066 9.708092 GGCCCTAAGTTTACATAAGTAGATAAG 57.292 37.037 0.00 0.00 0.00 1.73
4252 6089 3.713889 GTGAACTCACAAGCGAGATTC 57.286 47.619 4.96 0.00 45.75 2.52
4253 6090 3.321497 GTGAACTCACAAGCGAGATTCT 58.679 45.455 4.96 0.00 45.75 2.40
4254 6091 3.743396 GTGAACTCACAAGCGAGATTCTT 59.257 43.478 4.96 0.00 45.75 2.52
4255 6092 3.742882 TGAACTCACAAGCGAGATTCTTG 59.257 43.478 0.00 0.00 44.71 3.02
4260 6097 2.975410 CAAGCGAGATTCTTGTTGCA 57.025 45.000 2.89 0.00 36.93 4.08
4261 6098 2.578495 CAAGCGAGATTCTTGTTGCAC 58.422 47.619 2.89 0.00 36.93 4.57
4262 6099 2.175878 AGCGAGATTCTTGTTGCACT 57.824 45.000 2.89 0.00 0.00 4.40
4263 6100 3.319137 AGCGAGATTCTTGTTGCACTA 57.681 42.857 2.89 0.00 0.00 2.74
4264 6101 2.996621 AGCGAGATTCTTGTTGCACTAC 59.003 45.455 2.89 0.00 0.00 2.73
4265 6102 2.996621 GCGAGATTCTTGTTGCACTACT 59.003 45.455 2.89 0.00 0.00 2.57
4266 6103 3.433615 GCGAGATTCTTGTTGCACTACTT 59.566 43.478 2.89 0.00 0.00 2.24
4267 6104 4.625742 GCGAGATTCTTGTTGCACTACTTA 59.374 41.667 2.89 0.00 0.00 2.24
4268 6105 5.120208 GCGAGATTCTTGTTGCACTACTTAA 59.880 40.000 2.89 0.00 0.00 1.85
4269 6106 6.526222 CGAGATTCTTGTTGCACTACTTAAC 58.474 40.000 0.00 0.00 0.00 2.01
4270 6107 6.401153 CGAGATTCTTGTTGCACTACTTAACC 60.401 42.308 0.00 0.00 0.00 2.85
4271 6108 6.534634 AGATTCTTGTTGCACTACTTAACCT 58.465 36.000 0.00 0.00 0.00 3.50
4272 6109 7.676947 AGATTCTTGTTGCACTACTTAACCTA 58.323 34.615 0.00 0.00 0.00 3.08
4273 6110 8.154856 AGATTCTTGTTGCACTACTTAACCTAA 58.845 33.333 0.00 0.00 0.00 2.69
4274 6111 7.486802 TTCTTGTTGCACTACTTAACCTAAC 57.513 36.000 0.00 0.00 0.00 2.34
4275 6112 6.584488 TCTTGTTGCACTACTTAACCTAACA 58.416 36.000 0.00 0.00 0.00 2.41
4276 6113 7.049133 TCTTGTTGCACTACTTAACCTAACAA 58.951 34.615 0.00 0.00 36.00 2.83
4277 6114 7.553402 TCTTGTTGCACTACTTAACCTAACAAA 59.447 33.333 0.00 0.00 36.65 2.83
4278 6115 7.018635 TGTTGCACTACTTAACCTAACAAAC 57.981 36.000 0.00 0.00 0.00 2.93
4279 6116 6.038492 TGTTGCACTACTTAACCTAACAAACC 59.962 38.462 0.00 0.00 0.00 3.27
4280 6117 5.932455 TGCACTACTTAACCTAACAAACCT 58.068 37.500 0.00 0.00 0.00 3.50
4281 6118 6.358991 TGCACTACTTAACCTAACAAACCTT 58.641 36.000 0.00 0.00 0.00 3.50
4282 6119 6.484308 TGCACTACTTAACCTAACAAACCTTC 59.516 38.462 0.00 0.00 0.00 3.46
4283 6120 6.072838 GCACTACTTAACCTAACAAACCTTCC 60.073 42.308 0.00 0.00 0.00 3.46
4284 6121 6.993902 CACTACTTAACCTAACAAACCTTCCA 59.006 38.462 0.00 0.00 0.00 3.53
4285 6122 7.172703 CACTACTTAACCTAACAAACCTTCCAG 59.827 40.741 0.00 0.00 0.00 3.86
4286 6123 6.009908 ACTTAACCTAACAAACCTTCCAGT 57.990 37.500 0.00 0.00 0.00 4.00
4287 6124 6.429151 ACTTAACCTAACAAACCTTCCAGTT 58.571 36.000 0.00 0.00 0.00 3.16
4288 6125 6.320418 ACTTAACCTAACAAACCTTCCAGTTG 59.680 38.462 0.00 0.00 0.00 3.16
4289 6126 3.562182 ACCTAACAAACCTTCCAGTTGG 58.438 45.455 0.00 0.00 0.00 3.77
4290 6127 3.203487 ACCTAACAAACCTTCCAGTTGGA 59.797 43.478 0.00 0.00 43.73 3.53
4291 6128 3.568430 CCTAACAAACCTTCCAGTTGGAC 59.432 47.826 0.00 0.00 45.39 4.02
4292 6129 1.675552 ACAAACCTTCCAGTTGGACG 58.324 50.000 0.00 0.00 45.39 4.79
4293 6130 1.064979 ACAAACCTTCCAGTTGGACGT 60.065 47.619 0.00 0.00 45.39 4.34
4294 6131 1.333619 CAAACCTTCCAGTTGGACGTG 59.666 52.381 0.00 0.00 45.39 4.49
4295 6132 0.834612 AACCTTCCAGTTGGACGTGA 59.165 50.000 0.00 0.00 45.39 4.35
4296 6133 0.834612 ACCTTCCAGTTGGACGTGAA 59.165 50.000 0.00 0.00 45.39 3.18
4297 6134 1.226746 CCTTCCAGTTGGACGTGAAC 58.773 55.000 0.00 0.00 45.39 3.18
4298 6135 1.474320 CCTTCCAGTTGGACGTGAACA 60.474 52.381 0.00 0.00 45.39 3.18
4299 6136 1.597663 CTTCCAGTTGGACGTGAACAC 59.402 52.381 0.00 0.00 45.39 3.32
4310 6147 3.193471 GTGAACACGCCCCAAAATG 57.807 52.632 0.00 0.00 0.00 2.32
4311 6148 0.319469 GTGAACACGCCCCAAAATGG 60.319 55.000 0.00 0.00 37.25 3.16
4312 6149 0.468214 TGAACACGCCCCAAAATGGA 60.468 50.000 0.00 0.00 40.96 3.41
4313 6150 0.676736 GAACACGCCCCAAAATGGAA 59.323 50.000 0.00 0.00 40.96 3.53
4314 6151 1.275010 GAACACGCCCCAAAATGGAAT 59.725 47.619 0.00 0.00 40.96 3.01
4315 6152 0.894835 ACACGCCCCAAAATGGAATC 59.105 50.000 0.00 0.00 40.96 2.52
4316 6153 0.894141 CACGCCCCAAAATGGAATCA 59.106 50.000 0.00 0.00 40.96 2.57
4317 6154 1.274728 CACGCCCCAAAATGGAATCAA 59.725 47.619 0.00 0.00 40.96 2.57
4318 6155 1.974236 ACGCCCCAAAATGGAATCAAA 59.026 42.857 0.00 0.00 40.96 2.69
4319 6156 2.370189 ACGCCCCAAAATGGAATCAAAA 59.630 40.909 0.00 0.00 40.96 2.44
4320 6157 2.741517 CGCCCCAAAATGGAATCAAAAC 59.258 45.455 0.00 0.00 40.96 2.43
4321 6158 2.741517 GCCCCAAAATGGAATCAAAACG 59.258 45.455 0.00 0.00 40.96 3.60
4322 6159 2.741517 CCCCAAAATGGAATCAAAACGC 59.258 45.455 0.00 0.00 40.96 4.84
4323 6160 2.411409 CCCAAAATGGAATCAAAACGCG 59.589 45.455 3.53 3.53 40.96 6.01
4324 6161 3.056304 CCAAAATGGAATCAAAACGCGT 58.944 40.909 5.58 5.58 40.96 6.01
4325 6162 3.121058 CCAAAATGGAATCAAAACGCGTG 60.121 43.478 14.98 0.00 40.96 5.34
4326 6163 2.346099 AATGGAATCAAAACGCGTGG 57.654 45.000 14.98 5.92 0.00 4.94
4327 6164 1.243902 ATGGAATCAAAACGCGTGGT 58.756 45.000 14.98 0.00 0.00 4.16
4328 6165 1.880271 TGGAATCAAAACGCGTGGTA 58.120 45.000 14.98 0.00 0.00 3.25
4329 6166 2.219458 TGGAATCAAAACGCGTGGTAA 58.781 42.857 14.98 0.00 0.00 2.85
4330 6167 2.031857 TGGAATCAAAACGCGTGGTAAC 60.032 45.455 14.98 1.32 0.00 2.50
4343 6180 0.623723 TGGTAACATGGGAAGAGGGC 59.376 55.000 0.00 0.00 46.17 5.19
4344 6181 0.623723 GGTAACATGGGAAGAGGGCA 59.376 55.000 0.00 0.00 0.00 5.36
4345 6182 1.005450 GGTAACATGGGAAGAGGGCAA 59.995 52.381 0.00 0.00 0.00 4.52
4346 6183 2.556559 GGTAACATGGGAAGAGGGCAAA 60.557 50.000 0.00 0.00 0.00 3.68
4347 6184 2.397044 AACATGGGAAGAGGGCAAAA 57.603 45.000 0.00 0.00 0.00 2.44
4348 6185 1.928868 ACATGGGAAGAGGGCAAAAG 58.071 50.000 0.00 0.00 0.00 2.27
4349 6186 0.533951 CATGGGAAGAGGGCAAAAGC 59.466 55.000 0.00 0.00 0.00 3.51
4350 6187 0.411058 ATGGGAAGAGGGCAAAAGCT 59.589 50.000 0.00 0.00 0.00 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.120674 TGCAAGTGTGTCTAAATGAGAATCG 59.879 40.000 0.00 0.00 38.61 3.34
1 2 6.486253 TGCAAGTGTGTCTAAATGAGAATC 57.514 37.500 0.00 0.00 35.37 2.52
33 34 5.984926 TCCAAAGCAAAAATGATGTGAAGAC 59.015 36.000 0.00 0.00 0.00 3.01
34 35 6.159299 TCCAAAGCAAAAATGATGTGAAGA 57.841 33.333 0.00 0.00 0.00 2.87
42 43 3.657015 TGCGATCCAAAGCAAAAATGA 57.343 38.095 0.00 0.00 40.78 2.57
66 67 6.293790 GGTTTATTGGAAAGTTCGTACAAGCT 60.294 38.462 0.00 0.00 0.00 3.74
67 68 5.854866 GGTTTATTGGAAAGTTCGTACAAGC 59.145 40.000 0.00 0.00 0.00 4.01
72 73 7.669427 TGTAGAGGTTTATTGGAAAGTTCGTA 58.331 34.615 0.00 0.00 0.00 3.43
82 83 6.757897 TTGCATCTTGTAGAGGTTTATTGG 57.242 37.500 0.00 0.00 0.00 3.16
91 92 7.869429 AGAAAATGGTTTTTGCATCTTGTAGAG 59.131 33.333 0.00 0.00 35.20 2.43
123 124 7.982354 GGAAGTAAGAATATCGATCCCATAAGG 59.018 40.741 0.00 0.00 0.00 2.69
124 125 8.531982 TGGAAGTAAGAATATCGATCCCATAAG 58.468 37.037 0.00 0.00 0.00 1.73
139 140 8.429641 ACAGATGTAGACTTTTGGAAGTAAGAA 58.570 33.333 0.00 0.00 45.88 2.52
151 152 5.661312 TGCATAGGGTACAGATGTAGACTTT 59.339 40.000 0.00 0.00 0.00 2.66
155 156 6.524734 CAAATGCATAGGGTACAGATGTAGA 58.475 40.000 0.00 0.00 0.00 2.59
159 160 4.494350 GCAAATGCATAGGGTACAGATG 57.506 45.455 0.00 0.00 41.59 2.90
174 175 2.163010 GGTGAGTCCAGTGATGCAAATG 59.837 50.000 0.00 0.00 35.97 2.32
175 176 2.224843 TGGTGAGTCCAGTGATGCAAAT 60.225 45.455 0.00 0.00 41.93 2.32
176 177 1.142667 TGGTGAGTCCAGTGATGCAAA 59.857 47.619 0.00 0.00 41.93 3.68
214 221 4.695993 TGATGCACCAAGGCGCGA 62.696 61.111 12.10 0.00 36.28 5.87
224 231 0.179119 GCTTGGATTGGCTGATGCAC 60.179 55.000 0.00 0.00 41.91 4.57
225 232 0.323999 AGCTTGGATTGGCTGATGCA 60.324 50.000 0.00 0.00 41.91 3.96
232 239 3.847621 GCCCTAGCTTGGATTGGC 58.152 61.111 16.43 6.59 35.50 4.52
250 257 2.192979 GATGGAGGCATGGCGGAA 59.807 61.111 14.30 3.38 0.00 4.30
269 276 1.294780 CTATCGAGGGATGCAGGGC 59.705 63.158 0.00 0.00 34.00 5.19
273 280 2.217038 GGGGCTATCGAGGGATGCA 61.217 63.158 0.00 0.00 34.00 3.96
283 290 2.217510 TGGAGATCGTAGGGGCTATC 57.782 55.000 0.00 0.00 0.00 2.08
287 294 1.141053 ACAAATGGAGATCGTAGGGGC 59.859 52.381 0.00 0.00 0.00 5.80
305 313 1.228094 TGCAGGGATGTCGCAAACA 60.228 52.632 0.00 0.00 43.51 2.83
306 314 1.210155 GTGCAGGGATGTCGCAAAC 59.790 57.895 0.00 0.00 37.41 2.93
308 316 2.359850 GGTGCAGGGATGTCGCAA 60.360 61.111 0.00 0.00 37.41 4.85
309 317 3.315142 GAGGTGCAGGGATGTCGCA 62.315 63.158 0.00 0.00 0.00 5.10
310 318 2.512515 GAGGTGCAGGGATGTCGC 60.513 66.667 0.00 0.00 0.00 5.19
311 319 0.460987 GAAGAGGTGCAGGGATGTCG 60.461 60.000 0.00 0.00 0.00 4.35
312 320 0.908198 AGAAGAGGTGCAGGGATGTC 59.092 55.000 0.00 0.00 0.00 3.06
313 321 0.617413 CAGAAGAGGTGCAGGGATGT 59.383 55.000 0.00 0.00 0.00 3.06
315 323 1.280421 GTTCAGAAGAGGTGCAGGGAT 59.720 52.381 0.00 0.00 0.00 3.85
316 324 0.687354 GTTCAGAAGAGGTGCAGGGA 59.313 55.000 0.00 0.00 0.00 4.20
318 326 0.322008 GGGTTCAGAAGAGGTGCAGG 60.322 60.000 0.00 0.00 0.00 4.85
319 327 0.397941 TGGGTTCAGAAGAGGTGCAG 59.602 55.000 0.00 0.00 0.00 4.41
320 328 1.003580 GATGGGTTCAGAAGAGGTGCA 59.996 52.381 0.00 0.00 0.00 4.57
321 329 1.003580 TGATGGGTTCAGAAGAGGTGC 59.996 52.381 0.00 0.00 0.00 5.01
322 330 3.077359 GTTGATGGGTTCAGAAGAGGTG 58.923 50.000 0.00 0.00 35.27 4.00
323 331 2.040412 GGTTGATGGGTTCAGAAGAGGT 59.960 50.000 0.00 0.00 35.27 3.85
324 332 2.307098 AGGTTGATGGGTTCAGAAGAGG 59.693 50.000 0.00 0.00 35.27 3.69
329 337 1.974957 TCGAAGGTTGATGGGTTCAGA 59.025 47.619 0.00 0.00 35.27 3.27
361 369 1.375523 CTTGGTAGTGGTGTCGCCC 60.376 63.158 0.00 0.00 36.04 6.13
386 394 2.798445 TAGGAGCGACCCAGAGCCAA 62.798 60.000 0.00 0.00 40.05 4.52
420 428 0.537188 AACATCGAGGCACAGGTAGG 59.463 55.000 0.00 0.00 0.00 3.18
426 434 0.037326 GGACTCAACATCGAGGCACA 60.037 55.000 0.00 0.00 43.43 4.57
459 468 0.541764 TCAATTTTGCCCGAAGCCCT 60.542 50.000 0.00 0.00 42.71 5.19
486 495 5.549742 TCAGTTGCCTCAAAATCCAATTT 57.450 34.783 0.00 0.00 0.00 1.82
508 517 2.861935 GCTTTGCGCATTTGCTATTCAT 59.138 40.909 12.75 0.00 39.32 2.57
559 568 4.463891 CAGGAATTACAAGTTGGCCAATCT 59.536 41.667 23.66 17.30 0.00 2.40
560 569 4.220602 ACAGGAATTACAAGTTGGCCAATC 59.779 41.667 23.66 15.23 0.00 2.67
593 603 9.273016 GCTATCTCTTAAGTGGCACAAATAATA 57.727 33.333 21.41 7.84 44.16 0.98
603 613 5.852827 AGAAGATGCTATCTCTTAAGTGGC 58.147 41.667 1.63 0.00 39.08 5.01
616 627 5.614324 TTGCTAAGGCTTAGAAGATGCTA 57.386 39.130 32.87 14.49 39.59 3.49
668 679 5.591472 CCATGACAATCAGATTAGAAAGGCA 59.409 40.000 0.00 0.00 0.00 4.75
793 968 2.786777 GGTTGTATGGAACGGGAACTT 58.213 47.619 0.00 0.00 0.00 2.66
794 969 1.338389 CGGTTGTATGGAACGGGAACT 60.338 52.381 0.00 0.00 0.00 3.01
1157 1333 0.610687 GACCAGGTACTTGCTGAGCT 59.389 55.000 5.83 0.00 34.60 4.09
1158 1334 0.610687 AGACCAGGTACTTGCTGAGC 59.389 55.000 0.00 0.00 34.60 4.26
1159 1335 1.135257 CGAGACCAGGTACTTGCTGAG 60.135 57.143 0.00 0.00 34.60 3.35
1160 1336 0.888619 CGAGACCAGGTACTTGCTGA 59.111 55.000 0.00 0.00 34.60 4.26
1161 1337 0.737715 GCGAGACCAGGTACTTGCTG 60.738 60.000 17.76 0.00 39.57 4.41
1162 1338 1.592223 GCGAGACCAGGTACTTGCT 59.408 57.895 17.76 1.55 39.57 3.91
1163 1339 1.448013 GGCGAGACCAGGTACTTGC 60.448 63.158 17.17 17.17 41.29 4.01
1164 1340 0.608640 AAGGCGAGACCAGGTACTTG 59.391 55.000 0.00 0.00 43.14 3.16
1225 1405 0.387367 CTAACAGCACGCGACTGAGT 60.387 55.000 30.57 21.90 38.55 3.41
1237 1417 5.578005 TCACCGCCTATATATCTAACAGC 57.422 43.478 0.00 0.00 0.00 4.40
1248 1428 2.209690 TCGATCCATCACCGCCTATA 57.790 50.000 0.00 0.00 0.00 1.31
1251 1431 1.668294 GATCGATCCATCACCGCCT 59.332 57.895 14.76 0.00 0.00 5.52
1261 1447 1.524355 CTGCACATCAACGATCGATCC 59.476 52.381 24.34 2.92 0.00 3.36
1304 1490 1.369692 CCGAGTACACCACCAGCAA 59.630 57.895 0.00 0.00 0.00 3.91
1396 1582 2.727684 GACCGCGAAGAAGCCGTTC 61.728 63.158 8.23 0.00 0.00 3.95
1455 1641 1.196354 CGTCGACGACAAGGTAAGACT 59.804 52.381 33.35 0.00 43.02 3.24
1519 1706 0.325933 TAACGTCTCGACCCTGAGGA 59.674 55.000 0.00 0.00 36.61 3.71
1535 1722 2.991434 TGCGTGTCTGAGAGACTAAC 57.009 50.000 8.17 0.00 45.27 2.34
1539 1726 2.354109 TTCATGCGTGTCTGAGAGAC 57.646 50.000 5.68 0.00 45.26 3.36
1776 1969 9.000486 CAGTGCTTAGCTACATATACTACTGTA 58.000 37.037 5.60 0.00 0.00 2.74
1784 3575 5.069119 AGTGCACAGTGCTTAGCTACATATA 59.931 40.000 25.83 0.00 45.31 0.86
1793 3584 2.042104 GCAAAGTGCACAGTGCTTAG 57.958 50.000 27.98 12.27 45.31 2.18
1810 3601 8.704849 ACCATTTTTAGCTTGGTATATATGCA 57.295 30.769 5.19 0.00 41.88 3.96
1839 3630 2.054687 TAAGTTGCACGTACTGACCG 57.945 50.000 0.00 0.00 0.00 4.79
1868 3659 7.499232 CCTACGGAAAGGAATAACAGAATCATT 59.501 37.037 0.00 0.00 39.15 2.57
1877 3668 4.510571 TCAAGCCTACGGAAAGGAATAAC 58.489 43.478 5.03 0.00 39.15 1.89
1992 3783 2.228343 AGAACTACTACTGCACGGTGAC 59.772 50.000 13.29 3.96 0.00 3.67
1993 3784 2.511659 AGAACTACTACTGCACGGTGA 58.488 47.619 13.29 0.00 0.00 4.02
2372 4163 4.828387 TGGTGGATGCATATAGTACGTACA 59.172 41.667 26.55 13.44 0.00 2.90
2380 4171 4.885907 GGAATGGATGGTGGATGCATATAG 59.114 45.833 0.00 0.00 41.99 1.31
2393 4184 4.209538 TGATGCTAGTTTGGAATGGATGG 58.790 43.478 0.00 0.00 0.00 3.51
2394 4185 6.713903 AGTATGATGCTAGTTTGGAATGGATG 59.286 38.462 0.00 0.00 0.00 3.51
2395 4186 6.845908 AGTATGATGCTAGTTTGGAATGGAT 58.154 36.000 0.00 0.00 0.00 3.41
2396 4187 6.252599 AGTATGATGCTAGTTTGGAATGGA 57.747 37.500 0.00 0.00 0.00 3.41
2397 4188 7.172190 CAGTAGTATGATGCTAGTTTGGAATGG 59.828 40.741 0.00 0.00 0.00 3.16
2398 4189 7.307632 GCAGTAGTATGATGCTAGTTTGGAATG 60.308 40.741 0.00 0.00 37.00 2.67
2412 4217 2.366916 GGGAGCAGTGCAGTAGTATGAT 59.633 50.000 19.20 0.00 0.00 2.45
2415 4220 1.866015 TGGGAGCAGTGCAGTAGTAT 58.134 50.000 19.20 0.00 0.00 2.12
2419 4224 1.078214 GCATGGGAGCAGTGCAGTA 60.078 57.895 19.20 0.53 38.68 2.74
2432 4237 4.099727 TGATCACAACCCAAATATGCATGG 59.900 41.667 10.16 2.77 36.42 3.66
2446 4251 1.270274 TGCACAAGCCATGATCACAAC 59.730 47.619 0.00 0.00 41.13 3.32
2447 4252 1.618487 TGCACAAGCCATGATCACAA 58.382 45.000 0.00 0.00 41.13 3.33
2448 4253 1.474879 CATGCACAAGCCATGATCACA 59.525 47.619 0.00 0.00 41.13 3.58
2449 4254 1.746787 TCATGCACAAGCCATGATCAC 59.253 47.619 0.00 0.00 41.13 3.06
2528 4337 2.123854 TCCTCTATCTGCCGCGGT 60.124 61.111 28.70 9.45 0.00 5.68
2648 4457 2.829023 ACCACCGGGAAGAAGAGATAA 58.171 47.619 6.32 0.00 38.05 1.75
2714 4523 5.163652 GCTTTACAAGTTTCTCACCAGTTGT 60.164 40.000 0.00 0.00 39.41 3.32
2779 4593 9.515226 TGCTAGTTGAACCAAATTTAATACTCT 57.485 29.630 0.00 0.00 0.00 3.24
2780 4594 9.774742 CTGCTAGTTGAACCAAATTTAATACTC 57.225 33.333 0.00 0.00 0.00 2.59
2781 4595 8.739972 CCTGCTAGTTGAACCAAATTTAATACT 58.260 33.333 0.00 0.00 0.00 2.12
2783 4597 8.644374 ACCTGCTAGTTGAACCAAATTTAATA 57.356 30.769 0.00 0.00 0.00 0.98
2787 4601 6.514376 CGTTACCTGCTAGTTGAACCAAATTT 60.514 38.462 0.00 0.00 0.00 1.82
2788 4602 5.048991 CGTTACCTGCTAGTTGAACCAAATT 60.049 40.000 0.00 0.00 0.00 1.82
2789 4603 4.454504 CGTTACCTGCTAGTTGAACCAAAT 59.545 41.667 0.00 0.00 0.00 2.32
2794 4608 3.057033 TCTCCGTTACCTGCTAGTTGAAC 60.057 47.826 0.00 0.00 0.00 3.18
2795 4609 3.159472 TCTCCGTTACCTGCTAGTTGAA 58.841 45.455 0.00 0.00 0.00 2.69
2796 4610 2.799017 TCTCCGTTACCTGCTAGTTGA 58.201 47.619 0.00 0.00 0.00 3.18
2797 4611 3.448686 CATCTCCGTTACCTGCTAGTTG 58.551 50.000 0.00 0.00 0.00 3.16
2799 4613 2.032620 CCATCTCCGTTACCTGCTAGT 58.967 52.381 0.00 0.00 0.00 2.57
2800 4614 1.269831 GCCATCTCCGTTACCTGCTAG 60.270 57.143 0.00 0.00 0.00 3.42
2801 4615 0.750850 GCCATCTCCGTTACCTGCTA 59.249 55.000 0.00 0.00 0.00 3.49
2802 4616 1.522569 GCCATCTCCGTTACCTGCT 59.477 57.895 0.00 0.00 0.00 4.24
2845 4659 3.445450 ACTCGTTCTGCAGTATGATGTCT 59.555 43.478 14.67 0.00 39.69 3.41
2953 4767 3.535561 CAAGCCCTATAAGGTGTGTGAG 58.464 50.000 0.00 0.00 31.93 3.51
3073 4891 2.925578 GCACTCTGCATTGCATGTTA 57.074 45.000 12.53 0.00 44.26 2.41
3194 5013 0.821711 GCTTGTTGCACAGTACCCCA 60.822 55.000 0.00 0.00 42.31 4.96
3308 5127 1.869774 TGATCCTGATGATTTCGCCG 58.130 50.000 0.00 0.00 32.41 6.46
3314 5133 5.691896 TGCTCAAGATTGATCCTGATGATT 58.308 37.500 0.00 0.00 36.46 2.57
3377 5196 4.142182 ACAAAGCCAATACATTCATTCCGG 60.142 41.667 0.00 0.00 0.00 5.14
3439 5258 5.658190 CCCAGATCATTTTGGTGTATCCTTT 59.342 40.000 0.00 0.00 37.07 3.11
3521 5340 8.671384 ACACTTAAACTGTTGTGCTAAATAGA 57.329 30.769 8.80 0.00 34.14 1.98
3604 5423 9.562408 TTAACTATGTTGGAGTACAATGAACAA 57.438 29.630 0.00 0.00 41.95 2.83
3609 5428 9.289303 GCAAATTAACTATGTTGGAGTACAATG 57.711 33.333 0.00 0.00 41.95 2.82
3619 5438 8.978564 TTACATGGTGCAAATTAACTATGTTG 57.021 30.769 17.20 0.00 43.44 3.33
3651 5470 3.688694 TTGGTAGCACCGTTATCTTGT 57.311 42.857 0.00 0.00 42.58 3.16
3654 5473 4.689612 ATCATTGGTAGCACCGTTATCT 57.310 40.909 0.00 0.00 42.58 1.98
3669 5488 3.997021 GGTAGTTGGCCTCGATATCATTG 59.003 47.826 3.32 0.00 0.00 2.82
3672 5491 1.611977 CGGTAGTTGGCCTCGATATCA 59.388 52.381 3.32 0.00 0.00 2.15
3688 5507 1.000052 TGAGTCATTGCAACGACGGTA 60.000 47.619 18.92 7.58 37.23 4.02
3691 5510 0.858583 TGTGAGTCATTGCAACGACG 59.141 50.000 18.92 0.57 37.23 5.12
3714 5533 5.428457 ACTGGATGGTGATTAGGTGAATACA 59.572 40.000 0.00 0.00 0.00 2.29
3754 5573 5.576563 TGAGAACTGGAGGGTGATAAAAA 57.423 39.130 0.00 0.00 0.00 1.94
3755 5574 5.576563 TTGAGAACTGGAGGGTGATAAAA 57.423 39.130 0.00 0.00 0.00 1.52
3756 5575 5.500234 CATTGAGAACTGGAGGGTGATAAA 58.500 41.667 0.00 0.00 0.00 1.40
3757 5576 4.626287 GCATTGAGAACTGGAGGGTGATAA 60.626 45.833 0.00 0.00 0.00 1.75
3760 5579 1.003580 GCATTGAGAACTGGAGGGTGA 59.996 52.381 0.00 0.00 0.00 4.02
3772 5591 1.270274 GCATGGTTGTGTGCATTGAGA 59.730 47.619 0.00 0.00 40.94 3.27
3796 5615 7.442969 TCGACAACCTTTATGTGATTACAACTT 59.557 33.333 0.00 0.00 40.84 2.66
3828 5649 0.322456 TGGGGCTGATTTTCACGGAG 60.322 55.000 0.00 0.00 0.00 4.63
3829 5650 0.331278 ATGGGGCTGATTTTCACGGA 59.669 50.000 0.00 0.00 0.00 4.69
3830 5651 1.185315 AATGGGGCTGATTTTCACGG 58.815 50.000 0.00 0.00 0.00 4.94
3831 5652 2.230992 TGAAATGGGGCTGATTTTCACG 59.769 45.455 0.00 0.00 34.20 4.35
3844 5680 7.064966 GCTTTAAAGTGGATTTGATGAAATGGG 59.935 37.037 16.38 0.00 31.58 4.00
3893 5729 9.666626 CAAACAAGATAAACGGTTGTATGTTAA 57.333 29.630 12.03 0.00 33.25 2.01
3901 5737 5.912955 GGAAGACAAACAAGATAAACGGTTG 59.087 40.000 0.00 0.00 0.00 3.77
3905 5741 4.708601 CGGGAAGACAAACAAGATAAACG 58.291 43.478 0.00 0.00 0.00 3.60
3906 5742 4.215613 AGCGGGAAGACAAACAAGATAAAC 59.784 41.667 0.00 0.00 0.00 2.01
3915 5751 1.360820 GAGCTAGCGGGAAGACAAAC 58.639 55.000 9.55 0.00 0.00 2.93
3918 5754 1.000486 AGGAGCTAGCGGGAAGACA 60.000 57.895 9.55 0.00 0.00 3.41
3920 5756 0.614979 AACAGGAGCTAGCGGGAAGA 60.615 55.000 9.55 0.00 0.00 2.87
3921 5757 0.250513 AAACAGGAGCTAGCGGGAAG 59.749 55.000 9.55 2.42 0.00 3.46
3922 5758 0.690762 AAAACAGGAGCTAGCGGGAA 59.309 50.000 9.55 0.00 0.00 3.97
3923 5759 0.249398 GAAAACAGGAGCTAGCGGGA 59.751 55.000 9.55 0.00 0.00 5.14
3925 5761 2.029838 ATGAAAACAGGAGCTAGCGG 57.970 50.000 9.55 3.14 0.00 5.52
3926 5762 3.786635 ACTATGAAAACAGGAGCTAGCG 58.213 45.455 9.55 0.00 0.00 4.26
3927 5763 5.178797 TCAACTATGAAAACAGGAGCTAGC 58.821 41.667 6.62 6.62 30.99 3.42
3928 5764 6.634805 TCTCAACTATGAAAACAGGAGCTAG 58.365 40.000 0.00 0.00 34.49 3.42
3929 5765 6.605471 TCTCAACTATGAAAACAGGAGCTA 57.395 37.500 0.00 0.00 34.49 3.32
3930 5766 5.489792 TCTCAACTATGAAAACAGGAGCT 57.510 39.130 0.00 0.00 34.49 4.09
3931 5767 5.703130 AGTTCTCAACTATGAAAACAGGAGC 59.297 40.000 0.00 0.00 38.68 4.70
3932 5768 7.736447 AAGTTCTCAACTATGAAAACAGGAG 57.264 36.000 0.00 0.00 38.68 3.69
3933 5769 9.273016 CTAAAGTTCTCAACTATGAAAACAGGA 57.727 33.333 0.00 0.00 38.68 3.86
3934 5770 9.057089 ACTAAAGTTCTCAACTATGAAAACAGG 57.943 33.333 0.00 0.00 38.68 4.00
3935 5771 9.869844 CACTAAAGTTCTCAACTATGAAAACAG 57.130 33.333 0.00 0.00 38.68 3.16
3936 5772 9.607988 TCACTAAAGTTCTCAACTATGAAAACA 57.392 29.630 0.00 0.00 38.68 2.83
3941 5777 9.698309 CTTTCTCACTAAAGTTCTCAACTATGA 57.302 33.333 0.00 0.00 41.91 2.15
3942 5778 8.930760 CCTTTCTCACTAAAGTTCTCAACTATG 58.069 37.037 0.00 0.00 41.91 2.23
3943 5779 8.652290 ACCTTTCTCACTAAAGTTCTCAACTAT 58.348 33.333 0.00 0.00 41.91 2.12
3944 5780 8.019656 ACCTTTCTCACTAAAGTTCTCAACTA 57.980 34.615 0.00 0.00 41.91 2.24
3945 5781 6.890293 ACCTTTCTCACTAAAGTTCTCAACT 58.110 36.000 0.00 0.00 45.46 3.16
3946 5782 6.987404 AGACCTTTCTCACTAAAGTTCTCAAC 59.013 38.462 0.00 0.00 34.27 3.18
3947 5783 7.125792 AGACCTTTCTCACTAAAGTTCTCAA 57.874 36.000 0.00 0.00 34.27 3.02
3948 5784 6.732896 AGACCTTTCTCACTAAAGTTCTCA 57.267 37.500 0.00 0.00 34.27 3.27
3949 5785 8.524487 TGATAGACCTTTCTCACTAAAGTTCTC 58.476 37.037 0.46 0.00 37.53 2.87
3950 5786 8.423906 TGATAGACCTTTCTCACTAAAGTTCT 57.576 34.615 0.00 0.00 40.22 3.01
3951 5787 7.762159 CCTGATAGACCTTTCTCACTAAAGTTC 59.238 40.741 0.00 0.00 35.16 3.01
3952 5788 7.310734 CCCTGATAGACCTTTCTCACTAAAGTT 60.311 40.741 0.00 0.00 35.16 2.66
3953 5789 6.155393 CCCTGATAGACCTTTCTCACTAAAGT 59.845 42.308 0.00 0.00 35.16 2.66
3954 5790 6.407525 CCCCTGATAGACCTTTCTCACTAAAG 60.408 46.154 0.00 0.00 36.43 1.85
3955 5791 5.425539 CCCCTGATAGACCTTTCTCACTAAA 59.574 44.000 0.00 0.00 32.75 1.85
3956 5792 4.962995 CCCCTGATAGACCTTTCTCACTAA 59.037 45.833 0.00 0.00 32.75 2.24
3957 5793 4.016479 ACCCCTGATAGACCTTTCTCACTA 60.016 45.833 0.00 0.00 32.75 2.74
3958 5794 3.246167 ACCCCTGATAGACCTTTCTCACT 60.246 47.826 0.00 0.00 32.75 3.41
3959 5795 3.108376 ACCCCTGATAGACCTTTCTCAC 58.892 50.000 0.00 0.00 32.75 3.51
3960 5796 3.491766 ACCCCTGATAGACCTTTCTCA 57.508 47.619 0.00 0.00 32.75 3.27
3961 5797 3.682999 GCAACCCCTGATAGACCTTTCTC 60.683 52.174 0.00 0.00 32.75 2.87
3962 5798 2.239907 GCAACCCCTGATAGACCTTTCT 59.760 50.000 0.00 0.00 35.66 2.52
3963 5799 2.239907 AGCAACCCCTGATAGACCTTTC 59.760 50.000 0.00 0.00 0.00 2.62
3964 5800 2.239907 GAGCAACCCCTGATAGACCTTT 59.760 50.000 0.00 0.00 0.00 3.11
3965 5801 1.840635 GAGCAACCCCTGATAGACCTT 59.159 52.381 0.00 0.00 0.00 3.50
3966 5802 1.008938 AGAGCAACCCCTGATAGACCT 59.991 52.381 0.00 0.00 0.00 3.85
3967 5803 1.139853 CAGAGCAACCCCTGATAGACC 59.860 57.143 0.00 0.00 32.37 3.85
3968 5804 1.474143 GCAGAGCAACCCCTGATAGAC 60.474 57.143 0.00 0.00 32.37 2.59
3969 5805 0.833287 GCAGAGCAACCCCTGATAGA 59.167 55.000 0.00 0.00 32.37 1.98
3970 5806 0.179034 GGCAGAGCAACCCCTGATAG 60.179 60.000 0.00 0.00 32.37 2.08
3971 5807 0.913934 TGGCAGAGCAACCCCTGATA 60.914 55.000 0.00 0.00 32.37 2.15
3972 5808 2.233566 TGGCAGAGCAACCCCTGAT 61.234 57.895 0.00 0.00 32.37 2.90
3973 5809 2.853542 TGGCAGAGCAACCCCTGA 60.854 61.111 0.00 0.00 32.37 3.86
3974 5810 2.674380 GTGGCAGAGCAACCCCTG 60.674 66.667 0.00 0.00 0.00 4.45
3975 5811 4.335647 CGTGGCAGAGCAACCCCT 62.336 66.667 0.00 0.00 0.00 4.79
3996 5832 4.994756 CACCCACCCACCCCTTGC 62.995 72.222 0.00 0.00 0.00 4.01
3997 5833 4.299796 CCACCCACCCACCCCTTG 62.300 72.222 0.00 0.00 0.00 3.61
4011 5847 4.596585 CACCACCACCCCACCCAC 62.597 72.222 0.00 0.00 0.00 4.61
4014 5850 2.206182 GATACCACCACCACCCCACC 62.206 65.000 0.00 0.00 0.00 4.61
4015 5851 1.301954 GATACCACCACCACCCCAC 59.698 63.158 0.00 0.00 0.00 4.61
4016 5852 1.926489 GGATACCACCACCACCCCA 60.926 63.158 0.00 0.00 0.00 4.96
4017 5853 1.926489 TGGATACCACCACCACCCC 60.926 63.158 0.00 0.00 34.77 4.95
4018 5854 3.829224 TGGATACCACCACCACCC 58.171 61.111 0.00 0.00 34.77 4.61
4028 5864 2.035576 CCGCTACTGGTAAGTGGATACC 59.964 54.545 0.00 0.00 44.69 2.73
4029 5865 2.692041 ACCGCTACTGGTAAGTGGATAC 59.308 50.000 9.54 0.00 41.55 2.24
4030 5866 2.691526 CACCGCTACTGGTAAGTGGATA 59.308 50.000 9.54 0.00 41.38 2.59
4031 5867 1.480954 CACCGCTACTGGTAAGTGGAT 59.519 52.381 9.54 0.00 41.38 3.41
4032 5868 0.892755 CACCGCTACTGGTAAGTGGA 59.107 55.000 9.54 0.00 41.38 4.02
4033 5869 0.606604 ACACCGCTACTGGTAAGTGG 59.393 55.000 1.24 1.24 41.38 4.00
4034 5870 2.066262 CAACACCGCTACTGGTAAGTG 58.934 52.381 0.00 0.00 41.38 3.16
4035 5871 1.690352 ACAACACCGCTACTGGTAAGT 59.310 47.619 0.00 0.00 41.38 2.24
4036 5872 2.066262 CACAACACCGCTACTGGTAAG 58.934 52.381 0.00 0.00 41.38 2.34
4037 5873 1.413445 ACACAACACCGCTACTGGTAA 59.587 47.619 0.00 0.00 41.38 2.85
4038 5874 1.042229 ACACAACACCGCTACTGGTA 58.958 50.000 0.00 0.00 41.38 3.25
4039 5875 1.042229 TACACAACACCGCTACTGGT 58.958 50.000 0.00 0.00 45.21 4.00
4040 5876 2.157834 TTACACAACACCGCTACTGG 57.842 50.000 0.00 0.00 0.00 4.00
4041 5877 3.994392 AGATTTACACAACACCGCTACTG 59.006 43.478 0.00 0.00 0.00 2.74
4042 5878 4.243270 GAGATTTACACAACACCGCTACT 58.757 43.478 0.00 0.00 0.00 2.57
4043 5879 3.370061 GGAGATTTACACAACACCGCTAC 59.630 47.826 0.00 0.00 0.00 3.58
4044 5880 3.592059 GGAGATTTACACAACACCGCTA 58.408 45.455 0.00 0.00 0.00 4.26
4045 5881 2.423577 GGAGATTTACACAACACCGCT 58.576 47.619 0.00 0.00 0.00 5.52
4046 5882 1.467342 GGGAGATTTACACAACACCGC 59.533 52.381 0.00 0.00 0.00 5.68
4047 5883 2.482721 GTGGGAGATTTACACAACACCG 59.517 50.000 0.00 0.00 35.30 4.94
4048 5884 2.482721 CGTGGGAGATTTACACAACACC 59.517 50.000 0.00 0.00 34.91 4.16
4049 5885 3.395639 TCGTGGGAGATTTACACAACAC 58.604 45.455 0.00 0.00 34.91 3.32
4050 5886 3.322541 TCTCGTGGGAGATTTACACAACA 59.677 43.478 0.00 0.00 44.28 3.33
4051 5887 3.921677 TCTCGTGGGAGATTTACACAAC 58.078 45.455 0.00 0.00 44.28 3.32
4062 5898 3.303132 CGTTCAAAAAGTTCTCGTGGGAG 60.303 47.826 0.00 0.00 41.89 4.30
4063 5899 2.610374 CGTTCAAAAAGTTCTCGTGGGA 59.390 45.455 0.00 0.00 0.00 4.37
4064 5900 2.286772 CCGTTCAAAAAGTTCTCGTGGG 60.287 50.000 0.00 0.00 0.00 4.61
4065 5901 2.353579 ACCGTTCAAAAAGTTCTCGTGG 59.646 45.455 0.00 0.00 0.00 4.94
4066 5902 3.668596 ACCGTTCAAAAAGTTCTCGTG 57.331 42.857 0.00 0.00 0.00 4.35
4067 5903 4.690184 AAACCGTTCAAAAAGTTCTCGT 57.310 36.364 0.00 0.00 0.00 4.18
4068 5904 5.220135 CCAAAAACCGTTCAAAAAGTTCTCG 60.220 40.000 0.00 0.00 0.00 4.04
4069 5905 5.865013 TCCAAAAACCGTTCAAAAAGTTCTC 59.135 36.000 0.00 0.00 0.00 2.87
4070 5906 5.785243 TCCAAAAACCGTTCAAAAAGTTCT 58.215 33.333 0.00 0.00 0.00 3.01
4071 5907 5.445407 GCTCCAAAAACCGTTCAAAAAGTTC 60.445 40.000 0.00 0.00 0.00 3.01
4072 5908 4.390603 GCTCCAAAAACCGTTCAAAAAGTT 59.609 37.500 0.00 0.00 0.00 2.66
4073 5909 3.930229 GCTCCAAAAACCGTTCAAAAAGT 59.070 39.130 0.00 0.00 0.00 2.66
4074 5910 3.929610 TGCTCCAAAAACCGTTCAAAAAG 59.070 39.130 0.00 0.00 0.00 2.27
4075 5911 3.680458 GTGCTCCAAAAACCGTTCAAAAA 59.320 39.130 0.00 0.00 0.00 1.94
4076 5912 3.254892 GTGCTCCAAAAACCGTTCAAAA 58.745 40.909 0.00 0.00 0.00 2.44
4077 5913 2.417515 GGTGCTCCAAAAACCGTTCAAA 60.418 45.455 0.00 0.00 0.00 2.69
4078 5914 1.135333 GGTGCTCCAAAAACCGTTCAA 59.865 47.619 0.00 0.00 0.00 2.69
4079 5915 0.741915 GGTGCTCCAAAAACCGTTCA 59.258 50.000 0.00 0.00 0.00 3.18
4080 5916 0.031585 GGGTGCTCCAAAAACCGTTC 59.968 55.000 7.20 0.00 34.62 3.95
4081 5917 1.730451 CGGGTGCTCCAAAAACCGTT 61.730 55.000 7.20 0.00 36.78 4.44
4082 5918 2.190841 CGGGTGCTCCAAAAACCGT 61.191 57.895 7.20 0.00 36.78 4.83
4083 5919 2.190841 ACGGGTGCTCCAAAAACCG 61.191 57.895 7.20 0.05 46.16 4.44
4084 5920 1.104577 TCACGGGTGCTCCAAAAACC 61.105 55.000 7.20 0.00 34.36 3.27
4085 5921 0.741915 TTCACGGGTGCTCCAAAAAC 59.258 50.000 7.20 0.00 34.36 2.43
4086 5922 1.028905 CTTCACGGGTGCTCCAAAAA 58.971 50.000 7.20 0.00 34.36 1.94
4087 5923 0.106918 ACTTCACGGGTGCTCCAAAA 60.107 50.000 7.20 0.00 34.36 2.44
4088 5924 0.817634 CACTTCACGGGTGCTCCAAA 60.818 55.000 7.20 0.00 34.36 3.28
4089 5925 1.227823 CACTTCACGGGTGCTCCAA 60.228 57.895 7.20 0.00 34.36 3.53
4090 5926 2.425592 CACTTCACGGGTGCTCCA 59.574 61.111 7.20 0.00 34.36 3.86
4095 5931 4.454948 TGAAGCACTTCACGGGTG 57.545 55.556 8.99 0.00 43.90 4.61
4155 5992 3.609853 GGTAGCTTCATGATGTTCCACA 58.390 45.455 10.05 0.00 0.00 4.17
4165 6002 1.410153 GCCAAATGGGGTAGCTTCATG 59.590 52.381 0.00 0.00 37.04 3.07
4219 6056 7.600752 GCTTGTGAGTTCACTTCTTATCTACTT 59.399 37.037 12.97 0.00 46.55 2.24
4220 6057 7.093992 GCTTGTGAGTTCACTTCTTATCTACT 58.906 38.462 12.97 0.00 46.55 2.57
4221 6058 6.034044 CGCTTGTGAGTTCACTTCTTATCTAC 59.966 42.308 12.97 0.00 46.55 2.59
4222 6059 6.072119 TCGCTTGTGAGTTCACTTCTTATCTA 60.072 38.462 12.97 0.00 46.55 1.98
4223 6060 4.926238 CGCTTGTGAGTTCACTTCTTATCT 59.074 41.667 12.97 0.00 46.55 1.98
4224 6061 4.923871 TCGCTTGTGAGTTCACTTCTTATC 59.076 41.667 12.97 0.00 46.55 1.75
4225 6062 4.883083 TCGCTTGTGAGTTCACTTCTTAT 58.117 39.130 12.97 0.00 46.55 1.73
4226 6063 4.037565 TCTCGCTTGTGAGTTCACTTCTTA 59.962 41.667 12.97 0.00 46.55 2.10
4227 6064 3.126831 CTCGCTTGTGAGTTCACTTCTT 58.873 45.455 12.97 0.00 46.55 2.52
4228 6065 2.362397 TCTCGCTTGTGAGTTCACTTCT 59.638 45.455 12.97 0.00 46.55 2.85
4229 6066 2.743938 TCTCGCTTGTGAGTTCACTTC 58.256 47.619 12.97 2.43 46.55 3.01
4230 6067 2.890808 TCTCGCTTGTGAGTTCACTT 57.109 45.000 12.97 0.00 46.55 3.16
4231 6068 3.006323 AGAATCTCGCTTGTGAGTTCACT 59.994 43.478 12.97 0.00 46.55 3.41
4232 6069 3.321497 AGAATCTCGCTTGTGAGTTCAC 58.679 45.455 18.70 5.33 46.59 3.18
4233 6070 3.667497 AGAATCTCGCTTGTGAGTTCA 57.333 42.857 18.70 2.99 37.28 3.18
4234 6071 4.319235 CAAGAATCTCGCTTGTGAGTTC 57.681 45.455 10.46 12.22 38.29 3.01
4241 6078 2.225019 AGTGCAACAAGAATCTCGCTTG 59.775 45.455 0.00 0.00 46.20 4.01
4242 6079 2.498167 AGTGCAACAAGAATCTCGCTT 58.502 42.857 0.00 0.00 41.43 4.68
4243 6080 2.175878 AGTGCAACAAGAATCTCGCT 57.824 45.000 0.00 0.00 41.43 4.93
4244 6081 2.996621 AGTAGTGCAACAAGAATCTCGC 59.003 45.455 0.00 0.00 41.43 5.03
4245 6082 6.401153 GGTTAAGTAGTGCAACAAGAATCTCG 60.401 42.308 0.00 0.00 41.43 4.04
4246 6083 6.651225 AGGTTAAGTAGTGCAACAAGAATCTC 59.349 38.462 0.00 0.00 41.43 2.75
4247 6084 6.534634 AGGTTAAGTAGTGCAACAAGAATCT 58.465 36.000 0.00 0.00 41.43 2.40
4248 6085 6.803154 AGGTTAAGTAGTGCAACAAGAATC 57.197 37.500 0.00 0.00 41.43 2.52
4249 6086 7.717875 TGTTAGGTTAAGTAGTGCAACAAGAAT 59.282 33.333 0.00 0.00 41.43 2.40
4250 6087 7.049133 TGTTAGGTTAAGTAGTGCAACAAGAA 58.951 34.615 0.00 0.00 41.43 2.52
4251 6088 6.584488 TGTTAGGTTAAGTAGTGCAACAAGA 58.416 36.000 0.00 0.00 41.43 3.02
4252 6089 6.854496 TGTTAGGTTAAGTAGTGCAACAAG 57.146 37.500 0.00 0.00 41.43 3.16
4253 6090 7.415429 GGTTTGTTAGGTTAAGTAGTGCAACAA 60.415 37.037 0.00 0.00 41.43 2.83
4254 6091 6.038492 GGTTTGTTAGGTTAAGTAGTGCAACA 59.962 38.462 0.00 0.00 41.43 3.33
4255 6092 6.261603 AGGTTTGTTAGGTTAAGTAGTGCAAC 59.738 38.462 0.00 0.00 0.00 4.17
4256 6093 6.358991 AGGTTTGTTAGGTTAAGTAGTGCAA 58.641 36.000 0.00 0.00 0.00 4.08
4257 6094 5.932455 AGGTTTGTTAGGTTAAGTAGTGCA 58.068 37.500 0.00 0.00 0.00 4.57
4258 6095 6.072838 GGAAGGTTTGTTAGGTTAAGTAGTGC 60.073 42.308 0.00 0.00 0.00 4.40
4259 6096 6.993902 TGGAAGGTTTGTTAGGTTAAGTAGTG 59.006 38.462 0.00 0.00 0.00 2.74
4260 6097 7.140522 TGGAAGGTTTGTTAGGTTAAGTAGT 57.859 36.000 0.00 0.00 0.00 2.73
4261 6098 7.222161 ACTGGAAGGTTTGTTAGGTTAAGTAG 58.778 38.462 0.00 0.00 39.30 2.57
4262 6099 7.140522 ACTGGAAGGTTTGTTAGGTTAAGTA 57.859 36.000 0.00 0.00 39.30 2.24
4263 6100 6.009908 ACTGGAAGGTTTGTTAGGTTAAGT 57.990 37.500 0.00 0.00 39.30 2.24
4264 6101 6.238925 CCAACTGGAAGGTTTGTTAGGTTAAG 60.239 42.308 0.00 0.00 39.30 1.85
4265 6102 5.595133 CCAACTGGAAGGTTTGTTAGGTTAA 59.405 40.000 0.00 0.00 39.30 2.01
4266 6103 5.104024 TCCAACTGGAAGGTTTGTTAGGTTA 60.104 40.000 0.00 0.00 42.18 2.85
4267 6104 3.958147 CCAACTGGAAGGTTTGTTAGGTT 59.042 43.478 0.00 0.00 39.30 3.50
4268 6105 3.203487 TCCAACTGGAAGGTTTGTTAGGT 59.797 43.478 0.00 0.00 42.18 3.08
4269 6106 3.827722 TCCAACTGGAAGGTTTGTTAGG 58.172 45.455 0.00 0.00 42.18 2.69
4281 6118 0.528901 CGTGTTCACGTCCAACTGGA 60.529 55.000 15.81 0.00 43.08 3.86
4282 6119 1.931551 CGTGTTCACGTCCAACTGG 59.068 57.895 15.81 0.00 0.00 4.00
4283 6120 1.275657 GCGTGTTCACGTCCAACTG 59.724 57.895 22.85 3.11 35.26 3.16
4284 6121 1.885850 GGCGTGTTCACGTCCAACT 60.886 57.895 22.85 0.00 35.26 3.16
4285 6122 2.629763 GGCGTGTTCACGTCCAAC 59.370 61.111 22.85 8.75 35.26 3.77
4289 6126 1.716826 TTTTGGGGCGTGTTCACGTC 61.717 55.000 22.85 21.23 36.95 4.34
4290 6127 1.104577 ATTTTGGGGCGTGTTCACGT 61.105 50.000 22.85 1.83 35.26 4.49
4291 6128 0.662970 CATTTTGGGGCGTGTTCACG 60.663 55.000 19.03 19.03 0.00 4.35
4292 6129 0.319469 CCATTTTGGGGCGTGTTCAC 60.319 55.000 0.00 0.00 32.67 3.18
4293 6130 0.468214 TCCATTTTGGGGCGTGTTCA 60.468 50.000 0.00 0.00 38.32 3.18
4294 6131 0.676736 TTCCATTTTGGGGCGTGTTC 59.323 50.000 0.00 0.00 38.32 3.18
4295 6132 1.275010 GATTCCATTTTGGGGCGTGTT 59.725 47.619 0.00 0.00 38.32 3.32
4296 6133 0.894835 GATTCCATTTTGGGGCGTGT 59.105 50.000 0.00 0.00 38.32 4.49
4297 6134 0.894141 TGATTCCATTTTGGGGCGTG 59.106 50.000 0.00 0.00 38.32 5.34
4298 6135 1.638529 TTGATTCCATTTTGGGGCGT 58.361 45.000 0.00 0.00 38.32 5.68
4299 6136 2.741517 GTTTTGATTCCATTTTGGGGCG 59.258 45.455 0.00 0.00 38.32 6.13
4300 6137 2.741517 CGTTTTGATTCCATTTTGGGGC 59.258 45.455 0.00 0.00 38.32 5.80
4301 6138 2.741517 GCGTTTTGATTCCATTTTGGGG 59.258 45.455 0.00 0.00 38.32 4.96
4302 6139 2.411409 CGCGTTTTGATTCCATTTTGGG 59.589 45.455 0.00 0.00 38.32 4.12
4303 6140 3.056304 ACGCGTTTTGATTCCATTTTGG 58.944 40.909 5.58 0.00 39.43 3.28
4304 6141 3.121058 CCACGCGTTTTGATTCCATTTTG 60.121 43.478 10.22 0.00 0.00 2.44
4305 6142 3.056304 CCACGCGTTTTGATTCCATTTT 58.944 40.909 10.22 0.00 0.00 1.82
4306 6143 2.035321 ACCACGCGTTTTGATTCCATTT 59.965 40.909 10.22 0.00 0.00 2.32
4307 6144 1.611491 ACCACGCGTTTTGATTCCATT 59.389 42.857 10.22 0.00 0.00 3.16
4308 6145 1.243902 ACCACGCGTTTTGATTCCAT 58.756 45.000 10.22 0.00 0.00 3.41
4309 6146 1.880271 TACCACGCGTTTTGATTCCA 58.120 45.000 10.22 0.00 0.00 3.53
4310 6147 2.031857 TGTTACCACGCGTTTTGATTCC 60.032 45.455 10.22 0.00 0.00 3.01
4311 6148 3.256285 TGTTACCACGCGTTTTGATTC 57.744 42.857 10.22 0.00 0.00 2.52
4312 6149 3.560503 CATGTTACCACGCGTTTTGATT 58.439 40.909 10.22 0.00 0.00 2.57
4313 6150 2.095466 CCATGTTACCACGCGTTTTGAT 60.095 45.455 10.22 0.00 0.00 2.57
4314 6151 1.264557 CCATGTTACCACGCGTTTTGA 59.735 47.619 10.22 0.00 0.00 2.69
4315 6152 1.664588 CCCATGTTACCACGCGTTTTG 60.665 52.381 10.22 3.39 0.00 2.44
4316 6153 0.594110 CCCATGTTACCACGCGTTTT 59.406 50.000 10.22 0.69 0.00 2.43
4317 6154 0.250381 TCCCATGTTACCACGCGTTT 60.250 50.000 10.22 1.15 0.00 3.60
4318 6155 0.250381 TTCCCATGTTACCACGCGTT 60.250 50.000 10.22 0.00 0.00 4.84
4319 6156 0.672401 CTTCCCATGTTACCACGCGT 60.672 55.000 5.58 5.58 0.00 6.01
4320 6157 0.390603 TCTTCCCATGTTACCACGCG 60.391 55.000 3.53 3.53 0.00 6.01
4321 6158 1.369625 CTCTTCCCATGTTACCACGC 58.630 55.000 0.00 0.00 0.00 5.34
4322 6159 1.406887 CCCTCTTCCCATGTTACCACG 60.407 57.143 0.00 0.00 0.00 4.94
4323 6160 1.682087 GCCCTCTTCCCATGTTACCAC 60.682 57.143 0.00 0.00 0.00 4.16
4324 6161 0.623723 GCCCTCTTCCCATGTTACCA 59.376 55.000 0.00 0.00 0.00 3.25
4325 6162 0.623723 TGCCCTCTTCCCATGTTACC 59.376 55.000 0.00 0.00 0.00 2.85
4326 6163 2.507407 TTGCCCTCTTCCCATGTTAC 57.493 50.000 0.00 0.00 0.00 2.50
4327 6164 3.430453 CTTTTGCCCTCTTCCCATGTTA 58.570 45.455 0.00 0.00 0.00 2.41
4328 6165 2.250924 CTTTTGCCCTCTTCCCATGTT 58.749 47.619 0.00 0.00 0.00 2.71
4329 6166 1.928868 CTTTTGCCCTCTTCCCATGT 58.071 50.000 0.00 0.00 0.00 3.21
4330 6167 0.533951 GCTTTTGCCCTCTTCCCATG 59.466 55.000 0.00 0.00 40.15 3.66
4331 6168 2.982026 GCTTTTGCCCTCTTCCCAT 58.018 52.632 0.00 0.00 40.15 4.00
4332 6169 4.519610 GCTTTTGCCCTCTTCCCA 57.480 55.556 0.00 0.00 40.15 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.