Multiple sequence alignment - TraesCS3B01G325800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G325800 chr3B 100.000 5735 0 0 1 5735 526699821 526694087 0.000000e+00 10591.0
1 TraesCS3B01G325800 chr3B 92.857 126 8 1 4965 5089 372486261 372486386 1.270000e-41 182.0
2 TraesCS3B01G325800 chr3B 92.063 126 9 1 4965 5089 591893172 591893297 5.910000e-40 176.0
3 TraesCS3B01G325800 chr3A 93.582 1823 70 23 3007 4802 521306492 521304690 0.000000e+00 2675.0
4 TraesCS3B01G325800 chr3A 92.434 1520 75 4 1505 3009 521308016 521306522 0.000000e+00 2134.0
5 TraesCS3B01G325800 chr3A 95.370 648 19 3 5069 5711 521304651 521304010 0.000000e+00 1020.0
6 TraesCS3B01G325800 chr3A 85.282 727 56 18 781 1487 521308696 521308001 0.000000e+00 702.0
7 TraesCS3B01G325800 chr3A 96.000 50 2 0 2387 2436 724371540 724371589 1.320000e-11 82.4
8 TraesCS3B01G325800 chr3A 100.000 41 0 0 4926 4966 521304690 521304650 6.160000e-10 76.8
9 TraesCS3B01G325800 chr3D 90.805 1392 71 17 1647 3008 400997115 400995751 0.000000e+00 1808.0
10 TraesCS3B01G325800 chr3D 94.511 1093 46 7 3736 4819 400994955 400993868 0.000000e+00 1674.0
11 TraesCS3B01G325800 chr3D 93.407 728 31 9 3010 3732 400995717 400995002 0.000000e+00 1062.0
12 TraesCS3B01G325800 chr3D 95.944 641 19 2 5069 5708 400993827 400993193 0.000000e+00 1033.0
13 TraesCS3B01G325800 chr3D 90.132 456 38 5 30 479 24201164 24200710 2.300000e-163 586.0
14 TraesCS3B01G325800 chr3D 85.656 244 8 8 777 993 400999163 400998920 1.240000e-56 231.0
15 TraesCS3B01G325800 chr3D 93.443 122 6 2 4963 5083 326723699 326723579 4.570000e-41 180.0
16 TraesCS3B01G325800 chr3D 96.154 52 2 0 2387 2438 593106489 593106540 1.020000e-12 86.1
17 TraesCS3B01G325800 chr3D 100.000 45 0 0 4922 4966 400993870 400993826 3.680000e-12 84.2
18 TraesCS3B01G325800 chr5B 91.237 776 48 9 1 761 194168663 194169433 0.000000e+00 1038.0
19 TraesCS3B01G325800 chr5B 95.575 113 5 0 4812 4924 110432731 110432619 1.270000e-41 182.0
20 TraesCS3B01G325800 chr5B 93.913 115 7 0 4816 4930 224628394 224628508 2.120000e-39 174.0
21 TraesCS3B01G325800 chr5B 95.413 109 5 0 4816 4924 441746511 441746403 2.120000e-39 174.0
22 TraesCS3B01G325800 chr5B 90.826 109 9 1 8 115 209641873 209641981 1.670000e-30 145.0
23 TraesCS3B01G325800 chr4B 89.217 779 60 8 1 762 608594217 608593446 0.000000e+00 952.0
24 TraesCS3B01G325800 chr4B 93.443 122 6 2 4952 5072 646113812 646113932 4.570000e-41 180.0
25 TraesCS3B01G325800 chr5D 81.326 573 60 22 224 762 199003153 199002594 6.870000e-114 422.0
26 TraesCS3B01G325800 chr5D 88.584 219 25 0 8 226 199003755 199003537 3.410000e-67 267.0
27 TraesCS3B01G325800 chr5D 95.556 45 2 0 2394 2438 430064570 430064526 7.970000e-09 73.1
28 TraesCS3B01G325800 chr5D 88.889 54 4 2 2382 2433 505395106 505395053 1.330000e-06 65.8
29 TraesCS3B01G325800 chr5D 90.909 44 4 0 2394 2437 93064621 93064578 6.210000e-05 60.2
30 TraesCS3B01G325800 chr2B 94.355 124 5 2 4952 5074 460807158 460807280 7.590000e-44 189.0
31 TraesCS3B01G325800 chr2B 91.057 123 9 2 4802 4923 637574627 637574748 1.280000e-36 165.0
32 TraesCS3B01G325800 chr2A 94.828 116 5 1 4957 5071 412471534 412471649 4.570000e-41 180.0
33 TraesCS3B01G325800 chr2A 94.286 35 2 0 2499 2533 587162693 587162659 3.000000e-03 54.7
34 TraesCS3B01G325800 chr1B 93.333 120 6 2 4952 5070 604145096 604145214 5.910000e-40 176.0
35 TraesCS3B01G325800 chr1B 90.840 131 9 3 4954 5082 637810813 637810942 7.640000e-39 172.0
36 TraesCS3B01G325800 chr1B 84.146 82 10 3 2443 2523 169533070 169533149 6.160000e-10 76.8
37 TraesCS3B01G325800 chr1B 100.000 31 0 0 2507 2537 354655327 354655357 2.230000e-04 58.4
38 TraesCS3B01G325800 chr2D 95.413 109 5 0 4817 4925 139026050 139026158 2.120000e-39 174.0
39 TraesCS3B01G325800 chr2D 78.571 154 13 12 2389 2523 102591825 102591977 3.680000e-12 84.2
40 TraesCS3B01G325800 chr6B 93.860 114 7 0 4814 4927 20752494 20752607 7.640000e-39 172.0
41 TraesCS3B01G325800 chr6B 90.076 131 9 4 4798 4924 544804475 544804605 3.550000e-37 167.0
42 TraesCS3B01G325800 chr4A 93.103 116 8 0 4811 4926 722426192 722426307 2.750000e-38 171.0
43 TraesCS3B01G325800 chr4A 80.537 149 19 7 2384 2523 543368290 543368437 7.860000e-19 106.0
44 TraesCS3B01G325800 chr7A 90.076 131 12 1 4965 5094 32594492 32594362 9.880000e-38 169.0
45 TraesCS3B01G325800 chr7A 78.571 154 12 11 2389 2523 701301359 701301510 1.320000e-11 82.4
46 TraesCS3B01G325800 chr7A 92.157 51 4 0 2388 2438 679957017 679957067 7.970000e-09 73.1
47 TraesCS3B01G325800 chr6A 91.667 120 10 0 4804 4923 422165569 422165688 3.550000e-37 167.0
48 TraesCS3B01G325800 chr4D 80.137 146 19 6 2387 2523 53760138 53759994 3.660000e-17 100.0
49 TraesCS3B01G325800 chr4D 91.489 47 4 0 2392 2438 484680278 484680232 1.330000e-06 65.8
50 TraesCS3B01G325800 chr4D 100.000 33 0 0 2406 2438 87716655 87716623 1.730000e-05 62.1
51 TraesCS3B01G325800 chr4D 96.970 33 1 0 2406 2438 37050619 37050651 8.030000e-04 56.5
52 TraesCS3B01G325800 chr4D 96.970 33 0 1 2406 2438 392743480 392743449 3.000000e-03 54.7
53 TraesCS3B01G325800 chr7B 79.221 154 11 11 2389 2523 700413778 700413929 2.850000e-13 87.9
54 TraesCS3B01G325800 chr7B 92.453 53 2 2 2473 2524 107936355 107936304 2.220000e-09 75.0
55 TraesCS3B01G325800 chr1A 77.483 151 18 10 2389 2523 98236299 98236449 6.160000e-10 76.8
56 TraesCS3B01G325800 chr1A 92.000 50 4 0 2389 2438 91162179 91162228 2.870000e-08 71.3
57 TraesCS3B01G325800 chr7D 92.157 51 4 0 2388 2438 588081776 588081826 7.970000e-09 73.1
58 TraesCS3B01G325800 chr7D 92.000 50 4 0 2389 2438 611253579 611253628 2.870000e-08 71.3
59 TraesCS3B01G325800 chr7D 93.478 46 3 0 2394 2439 143991436 143991481 1.030000e-07 69.4
60 TraesCS3B01G325800 chr1D 92.000 50 4 0 2389 2438 79358124 79358173 2.870000e-08 71.3
61 TraesCS3B01G325800 chr1D 92.857 42 3 0 2397 2438 289395162 289395121 1.730000e-05 62.1
62 TraesCS3B01G325800 chr1D 91.111 45 4 0 2394 2438 314705611 314705655 1.730000e-05 62.1
63 TraesCS3B01G325800 chr6D 87.719 57 5 2 2378 2434 91560272 91560218 1.330000e-06 65.8
64 TraesCS3B01G325800 chrUn 93.023 43 2 1 2396 2438 12585648 12585689 1.730000e-05 62.1
65 TraesCS3B01G325800 chrUn 96.970 33 1 0 2406 2438 277499591 277499623 8.030000e-04 56.5
66 TraesCS3B01G325800 chrUn 96.970 33 1 0 2406 2438 408188767 408188799 8.030000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G325800 chr3B 526694087 526699821 5734 True 10591.000000 10591 100.000000 1 5735 1 chr3B.!!$R1 5734
1 TraesCS3B01G325800 chr3A 521304010 521308696 4686 True 1321.560000 2675 93.333600 781 5711 5 chr3A.!!$R1 4930
2 TraesCS3B01G325800 chr3D 400993193 400999163 5970 True 982.033333 1808 93.387167 777 5708 6 chr3D.!!$R3 4931
3 TraesCS3B01G325800 chr5B 194168663 194169433 770 False 1038.000000 1038 91.237000 1 761 1 chr5B.!!$F1 760
4 TraesCS3B01G325800 chr4B 608593446 608594217 771 True 952.000000 952 89.217000 1 762 1 chr4B.!!$R1 761
5 TraesCS3B01G325800 chr5D 199002594 199003755 1161 True 344.500000 422 84.955000 8 762 2 chr5D.!!$R4 754

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
741 1194 0.813821 GGAAGCAAAGCCATCAGGAC 59.186 55.0 0.00 0.0 36.89 3.85 F
1480 2059 0.034089 GGTAATCAGGGCTGGTGCTT 60.034 55.0 0.00 0.0 39.59 3.91 F
1488 2067 0.324943 GGGCTGGTGCTTAAGAGTCA 59.675 55.0 6.67 0.0 39.59 3.41 F
2080 3826 1.097547 GCGCATTCATACAGGTGGCT 61.098 55.0 0.30 0.0 0.00 4.75 F
2719 4485 1.573108 TCTCACATCCCCAGAGAACC 58.427 55.0 0.00 0.0 35.62 3.62 F
3930 5781 0.179108 GTAGGAACTCTCGCGCCATT 60.179 55.0 0.00 0.0 41.75 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1985 3731 0.405198 ATGTCACAAGGGCATCACCA 59.595 50.0 0.00 0.0 42.05 4.17 R
3342 5145 2.015736 ATCGACATTCCACTGTCAGC 57.984 50.0 0.00 0.0 44.69 4.26 R
3349 5152 5.066505 AGCCTATCAAAAATCGACATTCCAC 59.933 40.0 0.00 0.0 0.00 4.02 R
3926 5777 2.863401 TGTCGACGGATAGTGAATGG 57.137 50.0 11.62 0.0 0.00 3.16 R
4089 5945 0.475828 AAGAACCCCCAGCCTACACT 60.476 55.0 0.00 0.0 0.00 3.55 R
5473 7338 0.482446 ATTGGGGTGCAGTTTCCAGA 59.518 50.0 0.00 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
106 107 9.270640 CAAAATTGTTTTCCCATGAAACTATGA 57.729 29.630 9.21 0.00 40.12 2.15
169 172 5.083533 TGCACTTTTTGAAAACACATCCT 57.916 34.783 0.00 0.00 0.00 3.24
216 219 8.223378 ACCCATGATAATGATTCTTCCTATGA 57.777 34.615 0.00 0.00 0.00 2.15
310 699 6.122277 ACCACCACCTAAATACAGATTCATG 58.878 40.000 0.00 0.00 0.00 3.07
371 760 3.758554 ACATTGGTACATGGAAGCAAGTC 59.241 43.478 16.64 0.00 39.30 3.01
382 771 4.724399 TGGAAGCAAGTCTAATTCACCAA 58.276 39.130 0.00 0.00 0.00 3.67
577 1004 7.521669 AGATTGTGGGGATAAAGATTAGGAAG 58.478 38.462 0.00 0.00 0.00 3.46
595 1022 9.914131 ATTAGGAAGCAGATTTAGAAAACAAAC 57.086 29.630 0.00 0.00 0.00 2.93
663 1093 8.487970 CGTTAGTGATTATCGCATTTAACTCAT 58.512 33.333 8.54 0.00 0.00 2.90
672 1102 9.607988 TTATCGCATTTAACTCATAAAGGAAGA 57.392 29.630 0.00 0.00 37.44 2.87
674 1104 8.142994 TCGCATTTAACTCATAAAGGAAGATC 57.857 34.615 0.00 0.00 37.44 2.75
676 1106 7.042725 CGCATTTAACTCATAAAGGAAGATCGA 60.043 37.037 0.00 0.00 37.44 3.59
677 1107 8.612619 GCATTTAACTCATAAAGGAAGATCGAA 58.387 33.333 0.00 0.00 37.44 3.71
679 1109 8.718102 TTTAACTCATAAAGGAAGATCGAAGG 57.282 34.615 0.00 0.00 0.00 3.46
680 1110 6.546428 AACTCATAAAGGAAGATCGAAGGA 57.454 37.500 0.00 0.00 0.00 3.36
681 1111 5.908341 ACTCATAAAGGAAGATCGAAGGAC 58.092 41.667 0.00 0.00 0.00 3.85
682 1112 5.659079 ACTCATAAAGGAAGATCGAAGGACT 59.341 40.000 0.00 0.00 0.00 3.85
683 1113 5.907207 TCATAAAGGAAGATCGAAGGACTG 58.093 41.667 0.00 0.00 0.00 3.51
684 1114 3.618690 AAAGGAAGATCGAAGGACTGG 57.381 47.619 0.00 0.00 0.00 4.00
685 1115 2.534042 AGGAAGATCGAAGGACTGGA 57.466 50.000 0.00 0.00 0.00 3.86
686 1116 2.821437 AGGAAGATCGAAGGACTGGAA 58.179 47.619 0.00 0.00 0.00 3.53
687 1117 3.379452 AGGAAGATCGAAGGACTGGAAT 58.621 45.455 0.00 0.00 0.00 3.01
688 1118 4.547671 AGGAAGATCGAAGGACTGGAATA 58.452 43.478 0.00 0.00 0.00 1.75
698 1151 6.549736 TCGAAGGACTGGAATACATCTAATCA 59.450 38.462 0.00 0.00 0.00 2.57
731 1184 2.093447 ACCGGTCTGATAGGAAGCAAAG 60.093 50.000 0.00 0.00 0.00 2.77
739 1192 2.425143 TAGGAAGCAAAGCCATCAGG 57.575 50.000 0.00 0.00 38.23 3.86
741 1194 0.813821 GGAAGCAAAGCCATCAGGAC 59.186 55.000 0.00 0.00 36.89 3.85
762 1215 1.207089 TCTGATTCCTAGTTGTGCCCG 59.793 52.381 0.00 0.00 0.00 6.13
763 1216 1.207089 CTGATTCCTAGTTGTGCCCGA 59.793 52.381 0.00 0.00 0.00 5.14
764 1217 1.207089 TGATTCCTAGTTGTGCCCGAG 59.793 52.381 0.00 0.00 0.00 4.63
765 1218 1.480954 GATTCCTAGTTGTGCCCGAGA 59.519 52.381 0.00 0.00 0.00 4.04
766 1219 1.344065 TTCCTAGTTGTGCCCGAGAA 58.656 50.000 0.00 0.00 0.00 2.87
767 1220 1.344065 TCCTAGTTGTGCCCGAGAAA 58.656 50.000 0.00 0.00 0.00 2.52
768 1221 1.695242 TCCTAGTTGTGCCCGAGAAAA 59.305 47.619 0.00 0.00 0.00 2.29
769 1222 2.304761 TCCTAGTTGTGCCCGAGAAAAT 59.695 45.455 0.00 0.00 0.00 1.82
770 1223 3.516300 TCCTAGTTGTGCCCGAGAAAATA 59.484 43.478 0.00 0.00 0.00 1.40
771 1224 3.621715 CCTAGTTGTGCCCGAGAAAATAC 59.378 47.826 0.00 0.00 0.00 1.89
772 1225 3.418684 AGTTGTGCCCGAGAAAATACT 57.581 42.857 0.00 0.00 0.00 2.12
773 1226 3.751518 AGTTGTGCCCGAGAAAATACTT 58.248 40.909 0.00 0.00 0.00 2.24
774 1227 4.142038 AGTTGTGCCCGAGAAAATACTTT 58.858 39.130 0.00 0.00 0.00 2.66
775 1228 4.215613 AGTTGTGCCCGAGAAAATACTTTC 59.784 41.667 0.00 0.00 41.19 2.62
779 1232 3.945285 TGCCCGAGAAAATACTTTCATCC 59.055 43.478 0.00 0.00 42.99 3.51
799 1252 2.039084 CCTCAGTTCAACTACCCAGCTT 59.961 50.000 0.00 0.00 0.00 3.74
904 1387 2.563406 CCCTACCCTTCTTCTTCCCTT 58.437 52.381 0.00 0.00 0.00 3.95
1008 1491 1.819208 CCGATTCGCCATGGCTCAA 60.819 57.895 33.07 24.78 39.32 3.02
1011 1494 1.382522 GATTCGCCATGGCTCAAGAA 58.617 50.000 33.07 26.96 39.32 2.52
1015 1498 0.109597 CGCCATGGCTCAAGAACAAC 60.110 55.000 33.07 1.19 39.32 3.32
1024 1507 1.812571 CTCAAGAACAACCCAATCCCG 59.187 52.381 0.00 0.00 0.00 5.14
1035 1518 0.526954 CCAATCCCGACGAGGTAACG 60.527 60.000 0.00 0.00 46.39 3.18
1036 1519 0.452987 CAATCCCGACGAGGTAACGA 59.547 55.000 0.00 0.00 46.39 3.85
1042 1525 0.591741 CGACGAGGTAACGATCCAGC 60.592 60.000 0.00 0.00 46.39 4.85
1049 1532 1.593006 GGTAACGATCCAGCACGATTG 59.407 52.381 0.00 0.00 0.00 2.67
1050 1533 2.536365 GTAACGATCCAGCACGATTGA 58.464 47.619 7.16 0.00 0.00 2.57
1052 1535 2.315925 ACGATCCAGCACGATTGATT 57.684 45.000 7.16 0.00 0.00 2.57
1053 1536 2.205074 ACGATCCAGCACGATTGATTC 58.795 47.619 7.16 0.00 0.00 2.52
1054 1537 2.159043 ACGATCCAGCACGATTGATTCT 60.159 45.455 7.16 0.00 0.00 2.40
1056 1539 3.310774 CGATCCAGCACGATTGATTCTTT 59.689 43.478 0.00 0.00 0.00 2.52
1057 1540 4.595116 GATCCAGCACGATTGATTCTTTG 58.405 43.478 0.00 0.00 0.00 2.77
1058 1541 2.162208 TCCAGCACGATTGATTCTTTGC 59.838 45.455 0.00 0.00 33.37 3.68
1059 1542 2.163010 CCAGCACGATTGATTCTTTGCT 59.837 45.455 0.00 0.00 40.26 3.91
1073 1556 4.592485 TCTTTGCTTCTCTTCTTCGTCT 57.408 40.909 0.00 0.00 0.00 4.18
1075 1558 3.305398 TTGCTTCTCTTCTTCGTCTCC 57.695 47.619 0.00 0.00 0.00 3.71
1076 1559 2.520069 TGCTTCTCTTCTTCGTCTCCT 58.480 47.619 0.00 0.00 0.00 3.69
1077 1560 2.490115 TGCTTCTCTTCTTCGTCTCCTC 59.510 50.000 0.00 0.00 0.00 3.71
1078 1561 2.477189 GCTTCTCTTCTTCGTCTCCTCG 60.477 54.545 0.00 0.00 0.00 4.63
1079 1562 1.088306 TCTCTTCTTCGTCTCCTCGC 58.912 55.000 0.00 0.00 0.00 5.03
1080 1563 0.247894 CTCTTCTTCGTCTCCTCGCG 60.248 60.000 0.00 0.00 0.00 5.87
1081 1564 1.226435 CTTCTTCGTCTCCTCGCGG 60.226 63.158 6.13 0.00 0.00 6.46
1083 1566 4.116328 CTTCGTCTCCTCGCGGCA 62.116 66.667 6.13 0.00 0.00 5.69
1084 1567 3.417275 CTTCGTCTCCTCGCGGCAT 62.417 63.158 6.13 0.00 0.00 4.40
1085 1568 3.411418 TTCGTCTCCTCGCGGCATC 62.411 63.158 6.13 0.00 0.00 3.91
1086 1569 4.193334 CGTCTCCTCGCGGCATCA 62.193 66.667 6.13 0.00 0.00 3.07
1087 1570 2.583593 GTCTCCTCGCGGCATCAC 60.584 66.667 6.13 0.00 0.00 3.06
1120 1603 2.893398 GGCAATCCGACTCTCCGT 59.107 61.111 0.00 0.00 0.00 4.69
1130 1613 2.143594 GACTCTCCGTGCAGGTCGTT 62.144 60.000 5.57 0.00 41.99 3.85
1215 1698 4.664677 ACGACAGAGTGGTGCGCC 62.665 66.667 10.11 10.11 0.00 6.53
1226 1709 2.359230 GTGCGCCCTCTTGCTCTT 60.359 61.111 4.18 0.00 0.00 2.85
1231 1714 2.045131 GCCCTCTTGCTCTTGGCTG 61.045 63.158 0.00 0.00 42.39 4.85
1242 1725 0.620556 TCTTGGCTGGGGAGATGTTC 59.379 55.000 0.00 0.00 0.00 3.18
1248 1731 2.548920 GGCTGGGGAGATGTTCGATTAG 60.549 54.545 0.00 0.00 0.00 1.73
1250 1733 3.553922 GCTGGGGAGATGTTCGATTAGAG 60.554 52.174 0.00 0.00 0.00 2.43
1257 1826 5.420409 GAGATGTTCGATTAGAGGTGGTTT 58.580 41.667 0.00 0.00 0.00 3.27
1258 1827 5.420409 AGATGTTCGATTAGAGGTGGTTTC 58.580 41.667 0.00 0.00 0.00 2.78
1259 1828 4.884668 TGTTCGATTAGAGGTGGTTTCT 57.115 40.909 0.00 0.00 0.00 2.52
1260 1829 4.566004 TGTTCGATTAGAGGTGGTTTCTG 58.434 43.478 0.00 0.00 0.00 3.02
1261 1830 3.247006 TCGATTAGAGGTGGTTTCTGC 57.753 47.619 0.00 0.00 0.00 4.26
1262 1831 2.565391 TCGATTAGAGGTGGTTTCTGCA 59.435 45.455 0.00 0.00 0.00 4.41
1263 1832 2.932614 CGATTAGAGGTGGTTTCTGCAG 59.067 50.000 7.63 7.63 0.00 4.41
1264 1833 3.617531 CGATTAGAGGTGGTTTCTGCAGT 60.618 47.826 14.67 0.00 0.00 4.40
1265 1834 2.839486 TAGAGGTGGTTTCTGCAGTG 57.161 50.000 14.67 0.00 0.00 3.66
1266 1835 0.109342 AGAGGTGGTTTCTGCAGTGG 59.891 55.000 14.67 0.00 0.00 4.00
1267 1836 0.108585 GAGGTGGTTTCTGCAGTGGA 59.891 55.000 14.67 0.00 0.00 4.02
1268 1837 0.109342 AGGTGGTTTCTGCAGTGGAG 59.891 55.000 14.67 5.07 0.00 3.86
1269 1838 0.890996 GGTGGTTTCTGCAGTGGAGG 60.891 60.000 14.67 0.00 0.00 4.30
1270 1839 0.179018 GTGGTTTCTGCAGTGGAGGT 60.179 55.000 14.67 0.00 0.00 3.85
1271 1840 0.108585 TGGTTTCTGCAGTGGAGGTC 59.891 55.000 14.67 2.86 0.00 3.85
1272 1841 0.606673 GGTTTCTGCAGTGGAGGTCC 60.607 60.000 14.67 8.14 0.00 4.46
1273 1842 0.398318 GTTTCTGCAGTGGAGGTCCT 59.602 55.000 14.67 0.00 36.82 3.85
1274 1843 0.397941 TTTCTGCAGTGGAGGTCCTG 59.602 55.000 14.67 0.00 36.82 3.86
1275 1844 0.764369 TTCTGCAGTGGAGGTCCTGT 60.764 55.000 14.67 0.00 36.82 4.00
1287 1856 3.372025 GGAGGTCCTGTGGAATGCTAATT 60.372 47.826 0.00 0.00 31.38 1.40
1292 1863 5.827797 GGTCCTGTGGAATGCTAATTATGAA 59.172 40.000 0.00 0.00 31.38 2.57
1294 1865 7.014615 GGTCCTGTGGAATGCTAATTATGAATT 59.985 37.037 0.00 0.00 31.38 2.17
1296 1867 7.014518 TCCTGTGGAATGCTAATTATGAATTGG 59.985 37.037 0.00 0.00 33.05 3.16
1303 1874 4.584325 TGCTAATTATGAATTGGGACTGCC 59.416 41.667 0.00 0.00 30.84 4.85
1305 1876 5.278660 GCTAATTATGAATTGGGACTGCCTG 60.279 44.000 0.00 0.00 30.84 4.85
1314 1885 0.668535 GGGACTGCCTGTTTGTGTTC 59.331 55.000 0.00 0.00 0.00 3.18
1317 1888 0.393808 ACTGCCTGTTTGTGTTCGGT 60.394 50.000 0.00 0.00 0.00 4.69
1338 1917 4.700213 GGTTTCTTTGCTTGCAGGTCTATA 59.300 41.667 0.00 0.00 0.00 1.31
1346 1925 3.513515 GCTTGCAGGTCTATATCCTAGCT 59.486 47.826 0.00 0.00 33.73 3.32
1404 1983 1.701847 AGCTGGTCATCTTCAAGGTGT 59.298 47.619 0.00 0.00 0.00 4.16
1466 2045 7.316393 TGCTATACTGCTTTAGGATGGTAAT 57.684 36.000 0.00 0.00 31.09 1.89
1478 2057 0.106519 ATGGTAATCAGGGCTGGTGC 60.107 55.000 0.00 0.00 38.76 5.01
1479 2058 1.207488 TGGTAATCAGGGCTGGTGCT 61.207 55.000 0.00 0.00 39.59 4.40
1480 2059 0.034089 GGTAATCAGGGCTGGTGCTT 60.034 55.000 0.00 0.00 39.59 3.91
1481 2060 1.211949 GGTAATCAGGGCTGGTGCTTA 59.788 52.381 0.00 0.00 39.59 3.09
1482 2061 2.356741 GGTAATCAGGGCTGGTGCTTAA 60.357 50.000 0.00 0.00 39.59 1.85
1483 2062 2.134789 AATCAGGGCTGGTGCTTAAG 57.865 50.000 0.00 0.00 39.59 1.85
1484 2063 1.289160 ATCAGGGCTGGTGCTTAAGA 58.711 50.000 6.67 0.00 39.59 2.10
1485 2064 0.615331 TCAGGGCTGGTGCTTAAGAG 59.385 55.000 6.67 0.00 39.59 2.85
1486 2065 0.326264 CAGGGCTGGTGCTTAAGAGT 59.674 55.000 6.67 0.00 39.59 3.24
1487 2066 0.615850 AGGGCTGGTGCTTAAGAGTC 59.384 55.000 6.67 0.00 39.59 3.36
1488 2067 0.324943 GGGCTGGTGCTTAAGAGTCA 59.675 55.000 6.67 0.00 39.59 3.41
1489 2068 1.271379 GGGCTGGTGCTTAAGAGTCAA 60.271 52.381 6.67 0.00 39.59 3.18
1490 2069 2.504367 GGCTGGTGCTTAAGAGTCAAA 58.496 47.619 6.67 0.00 39.59 2.69
1491 2070 3.084786 GGCTGGTGCTTAAGAGTCAAAT 58.915 45.455 6.67 0.00 39.59 2.32
1492 2071 3.127721 GGCTGGTGCTTAAGAGTCAAATC 59.872 47.826 6.67 0.00 39.59 2.17
1493 2072 4.006319 GCTGGTGCTTAAGAGTCAAATCT 58.994 43.478 6.67 0.00 36.03 2.40
1494 2073 4.457257 GCTGGTGCTTAAGAGTCAAATCTT 59.543 41.667 6.67 0.00 38.43 2.40
1495 2074 5.643777 GCTGGTGCTTAAGAGTCAAATCTTA 59.356 40.000 6.67 0.00 39.45 2.10
1496 2075 6.149474 GCTGGTGCTTAAGAGTCAAATCTTAA 59.851 38.462 6.67 11.01 45.19 1.85
1497 2076 7.308589 GCTGGTGCTTAAGAGTCAAATCTTAAA 60.309 37.037 6.67 0.00 46.09 1.52
1498 2077 8.458573 TGGTGCTTAAGAGTCAAATCTTAAAA 57.541 30.769 6.67 3.64 46.09 1.52
1499 2078 8.908903 TGGTGCTTAAGAGTCAAATCTTAAAAA 58.091 29.630 6.67 3.36 46.09 1.94
1558 2137 4.757149 AGTTGGAGAAGTTTCAGGAAATCG 59.243 41.667 0.00 0.00 32.36 3.34
1559 2138 4.351874 TGGAGAAGTTTCAGGAAATCGT 57.648 40.909 0.00 0.00 32.36 3.73
1617 3353 5.691305 TGTCATGTTCAGCAAGTTTAAATGC 59.309 36.000 5.78 5.78 42.87 3.56
1714 3460 4.149922 CAGCAATTTTCACAAGTGCATGAG 59.850 41.667 9.41 0.00 37.68 2.90
1742 3488 3.350833 GTTTGATGATCAACAGGGAGCT 58.649 45.455 7.48 0.00 35.89 4.09
1799 3545 3.315470 TGTTCTACGAAGGGAGATCATCG 59.685 47.826 0.00 0.00 40.90 3.84
1825 3571 2.564553 ATTCTCAGAGTCGCCGTGCC 62.565 60.000 0.00 0.00 0.00 5.01
1826 3572 4.056125 CTCAGAGTCGCCGTGCCA 62.056 66.667 0.00 0.00 0.00 4.92
1841 3587 3.378112 CCGTGCCATATTGTCTGATTTGT 59.622 43.478 0.00 0.00 0.00 2.83
1849 3595 8.570488 GCCATATTGTCTGATTTGTATCATCAA 58.430 33.333 0.00 0.00 39.94 2.57
2030 3776 8.817092 ATTCGAGGAAAATTCCCTATTTTACA 57.183 30.769 8.56 0.00 45.70 2.41
2035 3781 7.126061 AGGAAAATTCCCTATTTTACAGGAGG 58.874 38.462 8.56 0.00 45.70 4.30
2080 3826 1.097547 GCGCATTCATACAGGTGGCT 61.098 55.000 0.30 0.00 0.00 4.75
2098 3844 4.278419 GTGGCTCTTGTTAATGGACTTGTT 59.722 41.667 0.00 0.00 0.00 2.83
2187 3933 7.066887 ACGAATCAATTTATGCCACACTTATGA 59.933 33.333 0.00 0.00 0.00 2.15
2191 3937 6.095300 TCAATTTATGCCACACTTATGACCTG 59.905 38.462 0.00 0.00 0.00 4.00
2202 3948 7.277981 CCACACTTATGACCTGTTTAGTGATAC 59.722 40.741 0.00 0.00 37.15 2.24
2247 3993 8.914654 CAAATTTTTGTGTACATGTATCACCTG 58.085 33.333 23.73 12.63 33.59 4.00
2288 4034 7.223582 AGTGATCATACATCAAAGTAAGCTTCG 59.776 37.037 0.00 0.00 33.01 3.79
2303 4049 3.209410 AGCTTCGATGCCTTTCTATTGG 58.791 45.455 18.70 0.00 0.00 3.16
2482 4248 6.868864 ACGTCTGTATATACATCCAATTCAGC 59.131 38.462 15.81 0.00 35.36 4.26
2678 4444 3.581332 CGGCTCCCTGGATATTTAGGTAA 59.419 47.826 0.00 0.00 31.99 2.85
2719 4485 1.573108 TCTCACATCCCCAGAGAACC 58.427 55.000 0.00 0.00 35.62 3.62
2755 4522 5.365021 ACTCAGAGGGATATTGTCCTTTG 57.635 43.478 1.53 0.00 46.91 2.77
2814 4581 5.850557 TTGGTCATGGCCAATTAACTATG 57.149 39.130 27.81 0.00 42.98 2.23
2922 4689 2.229543 TGCAAAAGAAATGATCGCTGCT 59.770 40.909 0.00 0.00 34.68 4.24
3039 4838 8.784043 CCTGTAGCTTGACTAACAAAATACTTT 58.216 33.333 0.00 0.00 38.08 2.66
3158 4957 2.125753 CTGCAGTCCGAGCTGTCC 60.126 66.667 5.25 0.00 38.65 4.02
3284 5087 7.504924 TCCGTGTTTACTCATTTGAAGAAAT 57.495 32.000 0.00 0.00 31.52 2.17
3483 5286 3.377346 TCACACTGTTGCTTCTCTCTC 57.623 47.619 0.00 0.00 0.00 3.20
3562 5365 2.361119 TGCTCGTTCTACACTCAGTTGT 59.639 45.455 0.00 0.00 0.00 3.32
3728 5535 7.446106 TTTACATAGGAGGAAGGCAGAAATA 57.554 36.000 0.00 0.00 0.00 1.40
3743 5593 5.106157 GGCAGAAATAATATAATGCCGTGCT 60.106 40.000 7.30 0.00 43.27 4.40
3755 5605 3.751479 TGCCGTGCTGTATAATGAGAT 57.249 42.857 0.00 0.00 0.00 2.75
3769 5619 9.045223 TGTATAATGAGATGAACGATTTTCCTG 57.955 33.333 0.00 0.00 0.00 3.86
3926 5777 2.061182 ATCGGTAGGAACTCTCGCGC 62.061 60.000 0.00 0.00 41.75 6.86
3930 5781 0.179108 GTAGGAACTCTCGCGCCATT 60.179 55.000 0.00 0.00 41.75 3.16
3933 5784 1.696832 GGAACTCTCGCGCCATTCAC 61.697 60.000 0.00 0.00 0.00 3.18
3941 5792 1.548973 CGCGCCATTCACTATCCGTC 61.549 60.000 0.00 0.00 0.00 4.79
4031 5882 8.768955 CATTAATAGCCACACTAGTCATTCTTC 58.231 37.037 0.00 0.00 33.29 2.87
4033 5884 4.199432 AGCCACACTAGTCATTCTTCTG 57.801 45.455 0.00 0.00 0.00 3.02
4042 5893 8.688151 ACACTAGTCATTCTTCTGGTTAGATAC 58.312 37.037 0.00 0.00 31.81 2.24
4049 5900 6.534475 TTCTTCTGGTTAGATACGGCTTTA 57.466 37.500 0.00 0.00 31.81 1.85
4050 5901 6.726490 TCTTCTGGTTAGATACGGCTTTAT 57.274 37.500 0.00 0.00 31.81 1.40
4076 5932 5.843673 TGCAAAACACACTTTGGAATCTA 57.156 34.783 0.00 0.00 34.20 1.98
4089 5945 7.067372 CACTTTGGAATCTATTTATGGAGTGCA 59.933 37.037 0.00 0.00 32.66 4.57
4212 6068 3.072184 AGAGTCTGCAGGAGTGTTTGAAT 59.928 43.478 15.13 0.00 0.00 2.57
4251 6107 2.967599 TGAACATCCTCCGATCTGTG 57.032 50.000 0.00 0.00 0.00 3.66
4266 6122 4.742167 CGATCTGTGATTACTGGTGATGTC 59.258 45.833 0.00 0.00 0.00 3.06
4283 6139 5.817296 GTGATGTCTATGAGGTATTGCAACA 59.183 40.000 0.00 0.00 0.00 3.33
4331 6187 7.669722 AGTCTTTTGGTTGAATCTTAGCCAATA 59.330 33.333 0.00 0.00 38.75 1.90
4433 6291 6.044871 CCCTCCCCTCTCTCAATACATATTTT 59.955 42.308 0.00 0.00 0.00 1.82
4436 6294 8.337118 TCCCCTCTCTCAATACATATTTTTCT 57.663 34.615 0.00 0.00 0.00 2.52
4466 6324 4.043561 TGTTCTTCAACTGGGGCCTAAATA 59.956 41.667 0.84 0.00 33.17 1.40
4504 6362 1.344953 ACAGTGGAGTCCTGCAACCA 61.345 55.000 11.33 0.00 33.09 3.67
4543 6401 3.942115 TGAAGACATTGACCGTGTTTTCA 59.058 39.130 7.78 7.78 43.84 2.69
4557 6415 4.681744 GTGTTTTCAAACCATTCAGCTCA 58.318 39.130 0.00 0.00 38.11 4.26
4682 6540 3.070446 ACTCTTCCAATGTCACCAACGTA 59.930 43.478 0.00 0.00 0.00 3.57
4743 6601 6.560253 AAATCTTCACAGTAATCACCACAC 57.440 37.500 0.00 0.00 0.00 3.82
4777 6635 0.111253 AGCAGCAGCCCTTTGTACTT 59.889 50.000 0.00 0.00 43.56 2.24
4819 6678 6.842163 GCATGTTTAGTGCAAATGTACTACT 58.158 36.000 10.35 0.43 41.70 2.57
4820 6679 6.961554 GCATGTTTAGTGCAAATGTACTACTC 59.038 38.462 10.35 7.70 41.70 2.59
4821 6680 7.464358 CATGTTTAGTGCAAATGTACTACTCC 58.536 38.462 10.35 3.62 41.70 3.85
4822 6681 5.935789 TGTTTAGTGCAAATGTACTACTCCC 59.064 40.000 10.35 1.63 41.70 4.30
4823 6682 6.171213 GTTTAGTGCAAATGTACTACTCCCT 58.829 40.000 10.35 0.00 41.70 4.20
4824 6683 4.473477 AGTGCAAATGTACTACTCCCTC 57.527 45.455 2.12 0.00 39.21 4.30
4825 6684 3.197983 AGTGCAAATGTACTACTCCCTCC 59.802 47.826 2.12 0.00 39.21 4.30
4826 6685 2.167693 TGCAAATGTACTACTCCCTCCG 59.832 50.000 0.00 0.00 0.00 4.63
4827 6686 2.167900 GCAAATGTACTACTCCCTCCGT 59.832 50.000 0.00 0.00 0.00 4.69
4828 6687 3.369157 GCAAATGTACTACTCCCTCCGTT 60.369 47.826 0.00 0.00 0.00 4.44
4829 6688 4.430908 CAAATGTACTACTCCCTCCGTTC 58.569 47.826 0.00 0.00 0.00 3.95
4830 6689 1.742761 TGTACTACTCCCTCCGTTCG 58.257 55.000 0.00 0.00 0.00 3.95
4831 6690 1.278985 TGTACTACTCCCTCCGTTCGA 59.721 52.381 0.00 0.00 0.00 3.71
4832 6691 2.290260 TGTACTACTCCCTCCGTTCGAA 60.290 50.000 0.00 0.00 0.00 3.71
4833 6692 1.915141 ACTACTCCCTCCGTTCGAAA 58.085 50.000 0.00 0.00 0.00 3.46
4834 6693 2.454538 ACTACTCCCTCCGTTCGAAAT 58.545 47.619 0.00 0.00 0.00 2.17
4835 6694 2.830321 ACTACTCCCTCCGTTCGAAATT 59.170 45.455 0.00 0.00 0.00 1.82
4836 6695 4.019174 ACTACTCCCTCCGTTCGAAATTA 58.981 43.478 0.00 0.00 0.00 1.40
4837 6696 3.242549 ACTCCCTCCGTTCGAAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
4838 6697 2.830321 ACTCCCTCCGTTCGAAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
4839 6698 3.260128 ACTCCCTCCGTTCGAAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
4840 6699 3.592059 TCCCTCCGTTCGAAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
4841 6700 3.007182 TCCCTCCGTTCGAAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
4842 6701 3.370061 CCCTCCGTTCGAAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
4843 6702 4.243270 CCTCCGTTCGAAATTACTTGTCT 58.757 43.478 0.00 0.00 0.00 3.41
4844 6703 4.326548 CCTCCGTTCGAAATTACTTGTCTC 59.673 45.833 0.00 0.00 0.00 3.36
4845 6704 3.916172 TCCGTTCGAAATTACTTGTCTCG 59.084 43.478 0.00 0.00 0.00 4.04
4846 6705 3.060363 CCGTTCGAAATTACTTGTCTCGG 59.940 47.826 0.00 0.00 0.00 4.63
4847 6706 3.916172 CGTTCGAAATTACTTGTCTCGGA 59.084 43.478 0.00 0.00 0.00 4.55
4848 6707 4.383649 CGTTCGAAATTACTTGTCTCGGAA 59.616 41.667 0.00 0.00 0.00 4.30
4849 6708 5.107760 CGTTCGAAATTACTTGTCTCGGAAA 60.108 40.000 0.00 0.00 0.00 3.13
4850 6709 6.400727 CGTTCGAAATTACTTGTCTCGGAAAT 60.401 38.462 0.00 0.00 0.00 2.17
4851 6710 6.403333 TCGAAATTACTTGTCTCGGAAATG 57.597 37.500 0.00 0.00 0.00 2.32
4852 6711 6.160684 TCGAAATTACTTGTCTCGGAAATGA 58.839 36.000 0.00 0.00 0.00 2.57
4853 6712 6.816640 TCGAAATTACTTGTCTCGGAAATGAT 59.183 34.615 0.00 0.00 0.00 2.45
4854 6713 7.333423 TCGAAATTACTTGTCTCGGAAATGATT 59.667 33.333 0.00 0.00 0.00 2.57
4855 6714 7.426456 CGAAATTACTTGTCTCGGAAATGATTG 59.574 37.037 0.00 0.00 0.00 2.67
4856 6715 7.687941 AATTACTTGTCTCGGAAATGATTGT 57.312 32.000 0.00 0.00 0.00 2.71
4857 6716 8.786826 AATTACTTGTCTCGGAAATGATTGTA 57.213 30.769 0.00 0.00 0.00 2.41
4858 6717 8.964476 ATTACTTGTCTCGGAAATGATTGTAT 57.036 30.769 0.00 0.00 0.00 2.29
4859 6718 6.910536 ACTTGTCTCGGAAATGATTGTATC 57.089 37.500 0.00 0.00 0.00 2.24
4860 6719 6.644347 ACTTGTCTCGGAAATGATTGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
4861 6720 7.782049 ACTTGTCTCGGAAATGATTGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
4862 6721 7.923344 ACTTGTCTCGGAAATGATTGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
4863 6722 7.582667 TGTCTCGGAAATGATTGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
4864 6723 8.007405 TGTCTCGGAAATGATTGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
4865 6724 7.921214 TGTCTCGGAAATGATTGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
4866 6725 8.138712 GTCTCGGAAATGATTGTATCTAGAACT 58.861 37.037 0.00 0.00 0.00 3.01
4867 6726 9.350951 TCTCGGAAATGATTGTATCTAGAACTA 57.649 33.333 0.00 0.00 0.00 2.24
4868 6727 9.967346 CTCGGAAATGATTGTATCTAGAACTAA 57.033 33.333 0.00 0.00 0.00 2.24
4884 6743 9.117183 TCTAGAACTAAAATACGTCTAGATGCA 57.883 33.333 12.04 0.00 32.48 3.96
4885 6744 9.900710 CTAGAACTAAAATACGTCTAGATGCAT 57.099 33.333 12.04 0.00 0.00 3.96
4886 6745 8.804688 AGAACTAAAATACGTCTAGATGCATC 57.195 34.615 19.37 19.37 0.00 3.91
4887 6746 7.868415 AGAACTAAAATACGTCTAGATGCATCC 59.132 37.037 23.06 6.84 0.00 3.51
4888 6747 7.050970 ACTAAAATACGTCTAGATGCATCCA 57.949 36.000 23.06 9.05 0.00 3.41
4889 6748 7.671302 ACTAAAATACGTCTAGATGCATCCAT 58.329 34.615 23.06 8.39 0.00 3.41
4890 6749 8.150945 ACTAAAATACGTCTAGATGCATCCATT 58.849 33.333 23.06 7.62 0.00 3.16
4891 6750 7.807977 AAAATACGTCTAGATGCATCCATTT 57.192 32.000 23.06 13.11 0.00 2.32
4892 6751 7.807977 AAATACGTCTAGATGCATCCATTTT 57.192 32.000 23.06 6.85 0.00 1.82
4893 6752 7.426929 AATACGTCTAGATGCATCCATTTTC 57.573 36.000 23.06 8.31 0.00 2.29
4894 6753 3.804325 ACGTCTAGATGCATCCATTTTCG 59.196 43.478 23.06 19.92 0.00 3.46
4895 6754 3.363378 CGTCTAGATGCATCCATTTTCGC 60.363 47.826 23.06 5.10 0.00 4.70
4896 6755 2.802247 TCTAGATGCATCCATTTTCGCG 59.198 45.455 23.06 0.00 0.00 5.87
4897 6756 1.667236 AGATGCATCCATTTTCGCGA 58.333 45.000 23.06 3.71 0.00 5.87
4898 6757 1.331756 AGATGCATCCATTTTCGCGAC 59.668 47.619 23.06 0.00 0.00 5.19
4899 6758 1.063912 GATGCATCCATTTTCGCGACA 59.936 47.619 16.23 0.00 0.00 4.35
4900 6759 0.877743 TGCATCCATTTTCGCGACAA 59.122 45.000 9.15 9.93 0.00 3.18
4901 6760 1.135717 TGCATCCATTTTCGCGACAAG 60.136 47.619 9.15 2.84 0.00 3.16
4902 6761 1.135689 GCATCCATTTTCGCGACAAGT 60.136 47.619 9.15 0.42 0.00 3.16
4903 6762 2.095213 GCATCCATTTTCGCGACAAGTA 59.905 45.455 9.15 0.00 0.00 2.24
4904 6763 3.425625 GCATCCATTTTCGCGACAAGTAA 60.426 43.478 9.15 0.00 0.00 2.24
4905 6764 4.730613 GCATCCATTTTCGCGACAAGTAAT 60.731 41.667 9.15 0.42 0.00 1.89
4906 6765 5.331902 CATCCATTTTCGCGACAAGTAATT 58.668 37.500 9.15 0.00 0.00 1.40
4907 6766 4.965062 TCCATTTTCGCGACAAGTAATTC 58.035 39.130 9.15 0.00 0.00 2.17
4908 6767 4.095610 CCATTTTCGCGACAAGTAATTCC 58.904 43.478 9.15 0.00 0.00 3.01
4909 6768 3.443054 TTTTCGCGACAAGTAATTCCG 57.557 42.857 9.15 0.00 0.00 4.30
4910 6769 2.350899 TTCGCGACAAGTAATTCCGA 57.649 45.000 9.15 0.00 0.00 4.55
4911 6770 2.350899 TCGCGACAAGTAATTCCGAA 57.649 45.000 3.71 0.00 0.00 4.30
4912 6771 2.674954 TCGCGACAAGTAATTCCGAAA 58.325 42.857 3.71 0.00 0.00 3.46
4913 6772 2.664568 TCGCGACAAGTAATTCCGAAAG 59.335 45.455 3.71 0.00 0.00 2.62
4964 6823 5.739358 GCCAACTGTTGAGAACTACTGTACT 60.739 44.000 21.49 0.00 34.43 2.73
4965 6824 6.516194 GCCAACTGTTGAGAACTACTGTACTA 60.516 42.308 21.49 0.00 34.43 1.82
4966 6825 6.862090 CCAACTGTTGAGAACTACTGTACTAC 59.138 42.308 21.49 0.00 34.43 2.73
4967 6826 7.255520 CCAACTGTTGAGAACTACTGTACTACT 60.256 40.741 21.49 0.00 34.43 2.57
4968 6827 7.437793 ACTGTTGAGAACTACTGTACTACTC 57.562 40.000 0.00 0.00 34.00 2.59
4969 6828 6.430616 ACTGTTGAGAACTACTGTACTACTCC 59.569 42.308 0.00 0.00 34.00 3.85
4970 6829 5.709164 TGTTGAGAACTACTGTACTACTCCC 59.291 44.000 0.00 0.00 0.00 4.30
4971 6830 5.775813 TGAGAACTACTGTACTACTCCCT 57.224 43.478 0.00 0.00 0.00 4.20
4972 6831 5.743117 TGAGAACTACTGTACTACTCCCTC 58.257 45.833 0.00 0.00 0.00 4.30
4973 6832 5.114764 AGAACTACTGTACTACTCCCTCC 57.885 47.826 0.00 0.00 0.00 4.30
4974 6833 3.557228 ACTACTGTACTACTCCCTCCG 57.443 52.381 0.00 0.00 0.00 4.63
4975 6834 2.843113 ACTACTGTACTACTCCCTCCGT 59.157 50.000 0.00 0.00 0.00 4.69
4976 6835 2.895242 ACTGTACTACTCCCTCCGTT 57.105 50.000 0.00 0.00 0.00 4.44
4977 6836 2.720915 ACTGTACTACTCCCTCCGTTC 58.279 52.381 0.00 0.00 0.00 3.95
4978 6837 1.669779 CTGTACTACTCCCTCCGTTCG 59.330 57.143 0.00 0.00 0.00 3.95
4979 6838 1.020437 GTACTACTCCCTCCGTTCGG 58.980 60.000 4.74 4.74 0.00 4.30
4980 6839 0.911769 TACTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
4981 6840 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
4982 6841 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
4983 6842 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
4984 6843 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
4985 6844 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
4986 6845 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
4987 6846 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
4988 6847 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
4989 6848 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
4990 6849 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
4991 6850 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
4992 6851 2.030007 TCCGTTCGGAATTACTTGTCGT 60.030 45.455 11.66 0.00 0.00 4.34
4993 6852 2.733026 CCGTTCGGAATTACTTGTCGTT 59.267 45.455 5.19 0.00 0.00 3.85
4994 6853 3.422603 CCGTTCGGAATTACTTGTCGTTG 60.423 47.826 5.19 0.00 0.00 4.10
4995 6854 3.426191 CGTTCGGAATTACTTGTCGTTGA 59.574 43.478 0.00 0.00 0.00 3.18
4996 6855 4.084952 CGTTCGGAATTACTTGTCGTTGAA 60.085 41.667 0.00 0.00 0.00 2.69
4997 6856 5.556758 CGTTCGGAATTACTTGTCGTTGAAA 60.557 40.000 0.00 0.00 0.00 2.69
4998 6857 6.368213 GTTCGGAATTACTTGTCGTTGAAAT 58.632 36.000 0.00 0.00 0.00 2.17
4999 6858 5.922546 TCGGAATTACTTGTCGTTGAAATG 58.077 37.500 0.00 0.00 0.00 2.32
5000 6859 5.086058 CGGAATTACTTGTCGTTGAAATGG 58.914 41.667 0.00 0.00 0.00 3.16
5001 6860 5.106869 CGGAATTACTTGTCGTTGAAATGGA 60.107 40.000 0.00 0.00 0.00 3.41
5002 6861 6.403200 CGGAATTACTTGTCGTTGAAATGGAT 60.403 38.462 0.00 0.00 0.00 3.41
5003 6862 6.747280 GGAATTACTTGTCGTTGAAATGGATG 59.253 38.462 0.00 0.00 0.00 3.51
5004 6863 6.817765 ATTACTTGTCGTTGAAATGGATGT 57.182 33.333 0.00 0.00 0.00 3.06
5005 6864 7.915293 ATTACTTGTCGTTGAAATGGATGTA 57.085 32.000 0.00 0.00 0.00 2.29
5006 6865 7.915293 TTACTTGTCGTTGAAATGGATGTAT 57.085 32.000 0.00 0.00 0.00 2.29
5007 6866 6.422776 ACTTGTCGTTGAAATGGATGTATC 57.577 37.500 0.00 0.00 0.00 2.24
5008 6867 6.173339 ACTTGTCGTTGAAATGGATGTATCT 58.827 36.000 0.00 0.00 0.00 1.98
5009 6868 7.327975 ACTTGTCGTTGAAATGGATGTATCTA 58.672 34.615 0.00 0.00 0.00 1.98
5010 6869 7.492669 ACTTGTCGTTGAAATGGATGTATCTAG 59.507 37.037 0.00 0.00 0.00 2.43
5011 6870 7.107639 TGTCGTTGAAATGGATGTATCTAGA 57.892 36.000 0.00 0.00 0.00 2.43
5012 6871 7.203218 TGTCGTTGAAATGGATGTATCTAGAG 58.797 38.462 0.00 0.00 0.00 2.43
5013 6872 7.147897 TGTCGTTGAAATGGATGTATCTAGAGT 60.148 37.037 0.00 0.00 0.00 3.24
5014 6873 8.350722 GTCGTTGAAATGGATGTATCTAGAGTA 58.649 37.037 0.00 0.00 0.00 2.59
5015 6874 9.078990 TCGTTGAAATGGATGTATCTAGAGTAT 57.921 33.333 0.00 0.00 0.00 2.12
5016 6875 9.698309 CGTTGAAATGGATGTATCTAGAGTATT 57.302 33.333 0.00 0.00 0.00 1.89
5045 6904 9.084533 AGTTCTAGATACATCCATTTCCTAGAC 57.915 37.037 0.00 0.00 33.22 2.59
5046 6905 8.861086 GTTCTAGATACATCCATTTCCTAGACA 58.139 37.037 0.00 0.00 33.22 3.41
5047 6906 9.434275 TTCTAGATACATCCATTTCCTAGACAA 57.566 33.333 0.00 0.00 33.22 3.18
5048 6907 9.083422 TCTAGATACATCCATTTCCTAGACAAG 57.917 37.037 0.00 0.00 29.82 3.16
5049 6908 7.682787 AGATACATCCATTTCCTAGACAAGT 57.317 36.000 0.00 0.00 0.00 3.16
5050 6909 8.783660 AGATACATCCATTTCCTAGACAAGTA 57.216 34.615 0.00 0.00 0.00 2.24
5051 6910 9.213777 AGATACATCCATTTCCTAGACAAGTAA 57.786 33.333 0.00 0.00 0.00 2.24
5054 6913 8.738645 ACATCCATTTCCTAGACAAGTAATTC 57.261 34.615 0.00 0.00 0.00 2.17
5055 6914 7.775561 ACATCCATTTCCTAGACAAGTAATTCC 59.224 37.037 0.00 0.00 0.00 3.01
5056 6915 7.265599 TCCATTTCCTAGACAAGTAATTCCA 57.734 36.000 0.00 0.00 0.00 3.53
5057 6916 7.695055 TCCATTTCCTAGACAAGTAATTCCAA 58.305 34.615 0.00 0.00 0.00 3.53
5058 6917 8.167392 TCCATTTCCTAGACAAGTAATTCCAAA 58.833 33.333 0.00 0.00 0.00 3.28
5059 6918 8.244113 CCATTTCCTAGACAAGTAATTCCAAAC 58.756 37.037 0.00 0.00 0.00 2.93
5060 6919 7.429636 TTTCCTAGACAAGTAATTCCAAACG 57.570 36.000 0.00 0.00 0.00 3.60
5061 6920 5.484715 TCCTAGACAAGTAATTCCAAACGG 58.515 41.667 0.00 0.00 0.00 4.44
5062 6921 5.246656 TCCTAGACAAGTAATTCCAAACGGA 59.753 40.000 0.00 0.00 0.00 4.69
5063 6922 5.581085 CCTAGACAAGTAATTCCAAACGGAG 59.419 44.000 0.00 0.00 32.88 4.63
5064 6923 4.324267 AGACAAGTAATTCCAAACGGAGG 58.676 43.478 0.00 0.00 32.88 4.30
5065 6924 3.418047 ACAAGTAATTCCAAACGGAGGG 58.582 45.455 0.00 0.00 32.88 4.30
5066 6925 3.073356 ACAAGTAATTCCAAACGGAGGGA 59.927 43.478 0.00 0.00 32.88 4.20
5067 6926 3.629142 AGTAATTCCAAACGGAGGGAG 57.371 47.619 0.00 0.00 34.02 4.30
5134 6994 5.998363 ACAAGTAAAACTCATCTCCTGTTCC 59.002 40.000 0.00 0.00 0.00 3.62
5275 7140 4.101790 CAACCATCACGCCCGTGC 62.102 66.667 15.39 0.00 45.04 5.34
5313 7178 5.515797 AGGACAAAAGTTCTACCAAAAGC 57.484 39.130 0.00 0.00 0.00 3.51
5348 7213 4.035017 CGAAACTGAAAACATGTGGTGTC 58.965 43.478 0.00 0.00 41.14 3.67
5369 7234 3.188667 TCTGCCTATCGTGTAAGCTATCG 59.811 47.826 0.00 0.00 0.00 2.92
5370 7235 3.143728 TGCCTATCGTGTAAGCTATCGA 58.856 45.455 0.00 0.00 36.77 3.59
5405 7270 2.154462 CAGGTAGCCCTTGTTGAACAG 58.846 52.381 0.00 0.00 39.89 3.16
5656 7521 1.926108 ACTAAAGGACGCCTCTGTCT 58.074 50.000 0.00 0.00 38.91 3.41
5686 7551 2.102084 TCAGCAGCCTAGCATGAAGTAG 59.898 50.000 0.00 0.00 36.85 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 7.883391 TGGAAATTGTTTGTACTAGTTTCCA 57.117 32.000 13.40 13.40 41.61 3.53
123 124 4.979943 TGTGCTCAGTTTGTTTTCATGA 57.020 36.364 0.00 0.00 0.00 3.07
149 150 7.623770 CATCAAGGATGTGTTTTCAAAAAGTG 58.376 34.615 0.00 0.00 35.54 3.16
169 172 4.717233 ACACTTGCTTCAAACACATCAA 57.283 36.364 0.00 0.00 0.00 2.57
268 657 4.439563 GGTGGTTCGTTTCACTTCACAAAT 60.440 41.667 0.00 0.00 34.57 2.32
284 673 6.177610 TGAATCTGTATTTAGGTGGTGGTTC 58.822 40.000 0.00 0.00 0.00 3.62
371 760 5.745294 CGGAAGCATCATTTTGGTGAATTAG 59.255 40.000 0.00 0.00 27.35 1.73
382 771 2.930040 CGTACTGACGGAAGCATCATTT 59.070 45.455 0.00 0.00 45.63 2.32
508 931 4.042187 ACTTCCTTGAGTGGCTACAAATCT 59.958 41.667 2.02 0.00 0.00 2.40
577 1004 4.295051 TGCGGTTTGTTTTCTAAATCTGC 58.705 39.130 0.00 0.00 0.00 4.26
595 1022 2.783135 AGCTGTTCCCATAATATGCGG 58.217 47.619 0.00 0.00 0.00 5.69
614 1041 6.313905 ACGTGAATTCTGCTGTTTCCTAATAG 59.686 38.462 7.05 0.00 0.00 1.73
624 1051 3.990092 TCACTAACGTGAATTCTGCTGT 58.010 40.909 7.05 0.00 46.61 4.40
663 1093 4.350245 TCCAGTCCTTCGATCTTCCTTTA 58.650 43.478 0.00 0.00 0.00 1.85
671 1101 5.461032 AGATGTATTCCAGTCCTTCGATC 57.539 43.478 0.00 0.00 0.00 3.69
672 1102 6.978674 TTAGATGTATTCCAGTCCTTCGAT 57.021 37.500 0.00 0.00 0.00 3.59
674 1104 6.749139 TGATTAGATGTATTCCAGTCCTTCG 58.251 40.000 0.00 0.00 0.00 3.79
676 1106 8.307483 CGTATGATTAGATGTATTCCAGTCCTT 58.693 37.037 0.00 0.00 0.00 3.36
677 1107 7.093727 CCGTATGATTAGATGTATTCCAGTCCT 60.094 40.741 0.00 0.00 0.00 3.85
678 1108 7.036220 CCGTATGATTAGATGTATTCCAGTCC 58.964 42.308 0.00 0.00 0.00 3.85
679 1109 6.531948 GCCGTATGATTAGATGTATTCCAGTC 59.468 42.308 0.00 0.00 0.00 3.51
680 1110 6.211584 AGCCGTATGATTAGATGTATTCCAGT 59.788 38.462 0.00 0.00 0.00 4.00
681 1111 6.634805 AGCCGTATGATTAGATGTATTCCAG 58.365 40.000 0.00 0.00 0.00 3.86
682 1112 6.605471 AGCCGTATGATTAGATGTATTCCA 57.395 37.500 0.00 0.00 0.00 3.53
683 1113 7.591795 CGATAGCCGTATGATTAGATGTATTCC 59.408 40.741 0.00 0.00 0.00 3.01
684 1114 8.343366 TCGATAGCCGTATGATTAGATGTATTC 58.657 37.037 0.00 0.00 39.75 1.75
685 1115 8.129840 GTCGATAGCCGTATGATTAGATGTATT 58.870 37.037 0.00 0.00 39.75 1.89
686 1116 7.255173 GGTCGATAGCCGTATGATTAGATGTAT 60.255 40.741 0.00 0.00 39.75 2.29
687 1117 6.037940 GGTCGATAGCCGTATGATTAGATGTA 59.962 42.308 0.00 0.00 39.75 2.29
688 1118 5.163642 GGTCGATAGCCGTATGATTAGATGT 60.164 44.000 0.00 0.00 39.75 3.06
739 1192 3.526534 GGCACAACTAGGAATCAGAGTC 58.473 50.000 0.00 0.00 0.00 3.36
741 1194 2.739932 CGGGCACAACTAGGAATCAGAG 60.740 54.545 0.00 0.00 0.00 3.35
755 1208 3.745799 TGAAAGTATTTTCTCGGGCACA 58.254 40.909 11.47 0.00 39.27 4.57
762 1215 8.553459 TGAACTGAGGATGAAAGTATTTTCTC 57.447 34.615 11.47 6.86 39.27 2.87
763 1216 8.787852 GTTGAACTGAGGATGAAAGTATTTTCT 58.212 33.333 11.47 0.00 39.27 2.52
764 1217 8.787852 AGTTGAACTGAGGATGAAAGTATTTTC 58.212 33.333 0.00 3.86 39.27 2.29
765 1218 8.697507 AGTTGAACTGAGGATGAAAGTATTTT 57.302 30.769 0.00 0.00 39.27 1.82
766 1219 9.220767 GTAGTTGAACTGAGGATGAAAGTATTT 57.779 33.333 8.33 0.00 43.98 1.40
767 1220 7.824779 GGTAGTTGAACTGAGGATGAAAGTATT 59.175 37.037 8.33 0.00 0.00 1.89
768 1221 7.331791 GGTAGTTGAACTGAGGATGAAAGTAT 58.668 38.462 8.33 0.00 0.00 2.12
769 1222 6.295688 GGGTAGTTGAACTGAGGATGAAAGTA 60.296 42.308 8.33 0.00 0.00 2.24
770 1223 5.513267 GGGTAGTTGAACTGAGGATGAAAGT 60.513 44.000 8.33 0.00 0.00 2.66
771 1224 4.938226 GGGTAGTTGAACTGAGGATGAAAG 59.062 45.833 8.33 0.00 0.00 2.62
772 1225 4.349636 TGGGTAGTTGAACTGAGGATGAAA 59.650 41.667 8.33 0.00 0.00 2.69
773 1226 3.907474 TGGGTAGTTGAACTGAGGATGAA 59.093 43.478 8.33 0.00 0.00 2.57
774 1227 3.515502 CTGGGTAGTTGAACTGAGGATGA 59.484 47.826 8.33 0.00 0.00 2.92
775 1228 3.866651 CTGGGTAGTTGAACTGAGGATG 58.133 50.000 8.33 0.00 0.00 3.51
779 1232 3.409026 AAGCTGGGTAGTTGAACTGAG 57.591 47.619 8.33 0.07 0.00 3.35
799 1252 0.899720 CCGGGGCTTGACTACTGTTA 59.100 55.000 0.00 0.00 0.00 2.41
843 1298 2.228480 TGAGGTTGGGGTAGGTGCC 61.228 63.158 0.00 0.00 0.00 5.01
904 1387 0.856982 AAGGAACCATTGGTGTGGGA 59.143 50.000 9.62 0.00 43.77 4.37
932 1415 1.377202 GAGGCGGGTGCTCAATTGA 60.377 57.895 8.12 8.12 42.25 2.57
1008 1491 0.321298 CGTCGGGATTGGGTTGTTCT 60.321 55.000 0.00 0.00 0.00 3.01
1011 1494 1.295423 CTCGTCGGGATTGGGTTGT 59.705 57.895 0.00 0.00 0.00 3.32
1015 1498 0.179092 GTTACCTCGTCGGGATTGGG 60.179 60.000 0.00 0.00 36.97 4.12
1024 1507 0.454600 TGCTGGATCGTTACCTCGTC 59.545 55.000 0.00 0.00 0.00 4.20
1035 1518 4.595116 CAAAGAATCAATCGTGCTGGATC 58.405 43.478 0.00 0.00 0.00 3.36
1036 1519 3.181493 GCAAAGAATCAATCGTGCTGGAT 60.181 43.478 0.00 0.00 39.49 3.41
1042 1525 5.542616 AGAGAAGCAAAGAATCAATCGTG 57.457 39.130 0.00 0.00 0.00 4.35
1049 1532 5.637387 AGACGAAGAAGAGAAGCAAAGAATC 59.363 40.000 0.00 0.00 0.00 2.52
1050 1533 5.546526 AGACGAAGAAGAGAAGCAAAGAAT 58.453 37.500 0.00 0.00 0.00 2.40
1052 1535 4.551388 GAGACGAAGAAGAGAAGCAAAGA 58.449 43.478 0.00 0.00 0.00 2.52
1053 1536 3.677596 GGAGACGAAGAAGAGAAGCAAAG 59.322 47.826 0.00 0.00 0.00 2.77
1054 1537 3.322254 AGGAGACGAAGAAGAGAAGCAAA 59.678 43.478 0.00 0.00 0.00 3.68
1056 1539 2.490115 GAGGAGACGAAGAAGAGAAGCA 59.510 50.000 0.00 0.00 0.00 3.91
1057 1540 2.477189 CGAGGAGACGAAGAAGAGAAGC 60.477 54.545 0.00 0.00 35.09 3.86
1058 1541 2.477189 GCGAGGAGACGAAGAAGAGAAG 60.477 54.545 0.00 0.00 35.09 2.85
1059 1542 1.469308 GCGAGGAGACGAAGAAGAGAA 59.531 52.381 0.00 0.00 35.09 2.87
1105 1588 0.803768 CTGCACGGAGAGTCGGATTG 60.804 60.000 0.00 0.00 0.00 2.67
1118 1601 2.805353 CCGAGAACGACCTGCACG 60.805 66.667 0.00 0.00 42.66 5.34
1120 1603 4.373116 GCCCGAGAACGACCTGCA 62.373 66.667 0.00 0.00 42.66 4.41
1130 1613 1.667154 CGTTGATCTCCTGCCCGAGA 61.667 60.000 2.60 2.60 42.93 4.04
1187 1670 0.716108 CTCTGTCGTTGATGCCGTTC 59.284 55.000 0.00 0.00 0.00 3.95
1226 1709 0.982852 ATCGAACATCTCCCCAGCCA 60.983 55.000 0.00 0.00 0.00 4.75
1231 1714 2.966516 ACCTCTAATCGAACATCTCCCC 59.033 50.000 0.00 0.00 0.00 4.81
1242 1725 2.932614 CTGCAGAAACCACCTCTAATCG 59.067 50.000 8.42 0.00 0.00 3.34
1248 1731 0.108585 TCCACTGCAGAAACCACCTC 59.891 55.000 23.35 0.00 0.00 3.85
1250 1733 0.890996 CCTCCACTGCAGAAACCACC 60.891 60.000 23.35 0.00 0.00 4.61
1257 1826 1.152247 ACAGGACCTCCACTGCAGA 60.152 57.895 23.35 0.00 38.25 4.26
1258 1827 1.004080 CACAGGACCTCCACTGCAG 60.004 63.158 13.48 13.48 38.25 4.41
1259 1828 2.519622 CCACAGGACCTCCACTGCA 61.520 63.158 0.00 0.00 38.25 4.41
1260 1829 1.768684 TTCCACAGGACCTCCACTGC 61.769 60.000 0.00 0.00 38.25 4.40
1261 1830 0.987294 ATTCCACAGGACCTCCACTG 59.013 55.000 0.00 0.00 40.48 3.66
1262 1831 0.987294 CATTCCACAGGACCTCCACT 59.013 55.000 0.00 0.00 38.89 4.00
1263 1832 0.678048 GCATTCCACAGGACCTCCAC 60.678 60.000 0.00 0.00 38.89 4.02
1264 1833 0.842030 AGCATTCCACAGGACCTCCA 60.842 55.000 0.00 0.00 38.89 3.86
1265 1834 1.204146 TAGCATTCCACAGGACCTCC 58.796 55.000 0.00 0.00 0.00 4.30
1266 1835 3.567478 ATTAGCATTCCACAGGACCTC 57.433 47.619 0.00 0.00 0.00 3.85
1267 1836 5.132648 TCATAATTAGCATTCCACAGGACCT 59.867 40.000 0.00 0.00 0.00 3.85
1268 1837 5.376625 TCATAATTAGCATTCCACAGGACC 58.623 41.667 0.00 0.00 0.00 4.46
1269 1838 6.942532 TTCATAATTAGCATTCCACAGGAC 57.057 37.500 0.00 0.00 0.00 3.85
1270 1839 7.014518 CCAATTCATAATTAGCATTCCACAGGA 59.985 37.037 0.00 0.00 0.00 3.86
1271 1840 7.149973 CCAATTCATAATTAGCATTCCACAGG 58.850 38.462 0.00 0.00 0.00 4.00
1272 1841 7.014518 TCCCAATTCATAATTAGCATTCCACAG 59.985 37.037 0.00 0.00 0.00 3.66
1273 1842 6.838090 TCCCAATTCATAATTAGCATTCCACA 59.162 34.615 0.00 0.00 0.00 4.17
1274 1843 7.014615 AGTCCCAATTCATAATTAGCATTCCAC 59.985 37.037 0.00 0.00 0.00 4.02
1275 1844 7.014518 CAGTCCCAATTCATAATTAGCATTCCA 59.985 37.037 0.00 0.00 0.00 3.53
1287 1856 3.737559 AACAGGCAGTCCCAATTCATA 57.262 42.857 0.00 0.00 35.39 2.15
1292 1863 1.331214 CACAAACAGGCAGTCCCAAT 58.669 50.000 0.00 0.00 35.39 3.16
1294 1865 0.033601 AACACAAACAGGCAGTCCCA 60.034 50.000 0.00 0.00 35.39 4.37
1296 1867 0.307760 CGAACACAAACAGGCAGTCC 59.692 55.000 0.00 0.00 0.00 3.85
1303 1874 3.303229 GCAAAGAAACCGAACACAAACAG 59.697 43.478 0.00 0.00 0.00 3.16
1305 1876 3.507786 AGCAAAGAAACCGAACACAAAC 58.492 40.909 0.00 0.00 0.00 2.93
1314 1885 0.385390 ACCTGCAAGCAAAGAAACCG 59.615 50.000 0.00 0.00 0.00 4.44
1317 1888 5.590259 GGATATAGACCTGCAAGCAAAGAAA 59.410 40.000 0.00 0.00 0.00 2.52
1338 1917 2.091389 TCTCCAAGAGCTGAGCTAGGAT 60.091 50.000 18.98 0.00 39.88 3.24
1346 1925 2.238144 CTCCCATTTCTCCAAGAGCTGA 59.762 50.000 0.00 0.00 0.00 4.26
1439 2018 4.262808 CCATCCTAAAGCAGTATAGCAGCT 60.263 45.833 0.00 0.00 41.97 4.24
1440 2019 3.999663 CCATCCTAAAGCAGTATAGCAGC 59.000 47.826 0.00 0.00 36.85 5.25
1441 2020 5.220710 ACCATCCTAAAGCAGTATAGCAG 57.779 43.478 0.00 0.00 36.85 4.24
1442 2021 6.740944 TTACCATCCTAAAGCAGTATAGCA 57.259 37.500 0.00 0.00 36.85 3.49
1443 2022 7.386851 TGATTACCATCCTAAAGCAGTATAGC 58.613 38.462 0.00 0.00 0.00 2.97
1444 2023 8.037758 CCTGATTACCATCCTAAAGCAGTATAG 58.962 40.741 0.00 0.00 0.00 1.31
1448 2027 4.141390 CCCTGATTACCATCCTAAAGCAGT 60.141 45.833 0.00 0.00 0.00 4.40
1466 2045 0.615331 CTCTTAAGCACCAGCCCTGA 59.385 55.000 0.00 0.00 43.56 3.86
1497 2076 4.286707 ACTCTTAAACACCAGCCCTTTTT 58.713 39.130 0.00 0.00 0.00 1.94
1498 2077 3.910989 ACTCTTAAACACCAGCCCTTTT 58.089 40.909 0.00 0.00 0.00 2.27
1499 2078 3.595190 ACTCTTAAACACCAGCCCTTT 57.405 42.857 0.00 0.00 0.00 3.11
1500 2079 4.288626 TGATACTCTTAAACACCAGCCCTT 59.711 41.667 0.00 0.00 0.00 3.95
1501 2080 3.844211 TGATACTCTTAAACACCAGCCCT 59.156 43.478 0.00 0.00 0.00 5.19
1502 2081 4.216411 TGATACTCTTAAACACCAGCCC 57.784 45.455 0.00 0.00 0.00 5.19
1503 2082 5.186198 ACATGATACTCTTAAACACCAGCC 58.814 41.667 0.00 0.00 0.00 4.85
1699 3437 2.874086 CTCACACTCATGCACTTGTGAA 59.126 45.455 17.83 0.00 45.78 3.18
1714 3460 4.083110 CCTGTTGATCATCAAACCTCACAC 60.083 45.833 0.29 0.00 38.22 3.82
1742 3488 2.560861 GCAGAAAATGCGCGTCCA 59.439 55.556 8.43 0.00 46.99 4.02
1799 3545 0.461961 CGACTCTGAGAATCCCACCC 59.538 60.000 12.44 0.00 0.00 4.61
1856 3602 7.062605 CAGCCTTGCTTTGTTACATGAAAATAG 59.937 37.037 0.00 0.00 36.40 1.73
1862 3608 3.221771 ACAGCCTTGCTTTGTTACATGA 58.778 40.909 0.00 0.00 36.40 3.07
1985 3731 0.405198 ATGTCACAAGGGCATCACCA 59.595 50.000 0.00 0.00 42.05 4.17
2062 3808 0.940126 GAGCCACCTGTATGAATGCG 59.060 55.000 0.00 0.00 0.00 4.73
2080 3826 6.432783 CACCCATAACAAGTCCATTAACAAGA 59.567 38.462 0.00 0.00 0.00 3.02
2098 3844 2.679342 GGCTGCACCTCCACCCATA 61.679 63.158 0.50 0.00 34.51 2.74
2187 3933 6.708949 ACAAACGAATGTATCACTAAACAGGT 59.291 34.615 0.00 0.00 0.00 4.00
2258 4004 9.967346 GCTTACTTTGATGTATGATCACTACTA 57.033 33.333 0.00 0.00 0.00 1.82
2259 4005 8.700051 AGCTTACTTTGATGTATGATCACTACT 58.300 33.333 0.00 0.00 0.00 2.57
2260 4006 8.879342 AGCTTACTTTGATGTATGATCACTAC 57.121 34.615 0.00 3.09 0.00 2.73
2261 4007 9.534565 GAAGCTTACTTTGATGTATGATCACTA 57.465 33.333 0.00 0.00 35.82 2.74
2262 4008 7.223582 CGAAGCTTACTTTGATGTATGATCACT 59.776 37.037 0.00 0.00 39.36 3.41
2288 4034 7.432252 CGAACAAAATACCAATAGAAAGGCATC 59.568 37.037 0.00 0.00 0.00 3.91
2450 4216 7.718525 TGGATGTATATACAGACGTGCTTTAA 58.281 34.615 19.80 0.00 39.92 1.52
2455 4221 6.645003 TGAATTGGATGTATATACAGACGTGC 59.355 38.462 19.80 9.67 39.92 5.34
2507 4273 4.736611 ATATAGTACTCCCTCCGTTCCA 57.263 45.455 0.00 0.00 0.00 3.53
2678 4444 7.178983 TGAGAATGGGAAATTAAACTCAATGCT 59.821 33.333 0.00 0.00 31.69 3.79
2719 4485 5.945784 TCCCTCTGAGTAAACCATTCAAATG 59.054 40.000 3.66 0.00 36.17 2.32
2755 4522 4.589908 ACTCATTCATAGTGTTTGTCCCC 58.410 43.478 0.00 0.00 0.00 4.81
2766 4533 8.442632 TTTTCTCATGCCTAACTCATTCATAG 57.557 34.615 0.00 0.00 0.00 2.23
2814 4581 9.183368 AGGAGATTGAAACTGAAATTCCTATTC 57.817 33.333 0.00 0.00 31.11 1.75
2922 4689 4.072131 GGACAAAATGAGTAGCAAGACCA 58.928 43.478 0.00 0.00 0.00 4.02
2972 4739 8.591312 CAAACAAAACAATACATCAAGAAACGT 58.409 29.630 0.00 0.00 0.00 3.99
3039 4838 7.446931 TCAAACTACAAGCAAACCAATATCAGA 59.553 33.333 0.00 0.00 0.00 3.27
3158 4957 5.269505 ACATCCGTAGAGAATTCCTCAAG 57.730 43.478 0.65 0.00 44.40 3.02
3246 5045 3.982576 ACACGGAATCCTTTCAACAAC 57.017 42.857 0.00 0.00 33.23 3.32
3253 5056 6.488683 TCAAATGAGTAAACACGGAATCCTTT 59.511 34.615 0.00 0.00 0.00 3.11
3284 5087 7.136119 CACATTACTCAAAGAAACCGCTTTTA 58.864 34.615 0.00 0.00 36.01 1.52
3288 5091 3.058224 GCACATTACTCAAAGAAACCGCT 60.058 43.478 0.00 0.00 0.00 5.52
3289 5092 3.058224 AGCACATTACTCAAAGAAACCGC 60.058 43.478 0.00 0.00 0.00 5.68
3337 5140 3.664107 GACATTCCACTGTCAGCTTGTA 58.336 45.455 0.00 0.00 44.03 2.41
3342 5145 2.015736 ATCGACATTCCACTGTCAGC 57.984 50.000 0.00 0.00 44.69 4.26
3349 5152 5.066505 AGCCTATCAAAAATCGACATTCCAC 59.933 40.000 0.00 0.00 0.00 4.02
3603 5406 7.345392 AGGTGCCAGGTGAATAAATCAAATTAT 59.655 33.333 0.00 0.00 40.50 1.28
3621 5424 4.156008 GGGCGATATAATTTTAGGTGCCAG 59.844 45.833 13.73 0.00 41.66 4.85
3623 5427 4.332828 AGGGCGATATAATTTTAGGTGCC 58.667 43.478 0.00 7.08 39.21 5.01
3694 5498 9.057089 CCTTCCTCCTATGTAAATGAACAATAC 57.943 37.037 0.00 0.00 32.02 1.89
3698 5502 5.045213 TGCCTTCCTCCTATGTAAATGAACA 60.045 40.000 0.00 0.00 0.00 3.18
3728 5535 8.040727 TCTCATTATACAGCACGGCATTATATT 58.959 33.333 0.00 0.00 0.00 1.28
3734 5553 3.751479 TCTCATTATACAGCACGGCAT 57.249 42.857 0.00 0.00 0.00 4.40
3743 5593 9.045223 CAGGAAAATCGTTCATCTCATTATACA 57.955 33.333 0.00 0.00 0.00 2.29
3926 5777 2.863401 TGTCGACGGATAGTGAATGG 57.137 50.000 11.62 0.00 0.00 3.16
3930 5781 4.562082 ACAAAATTGTCGACGGATAGTGA 58.438 39.130 11.62 0.00 36.50 3.41
3933 5784 5.277601 ACAACAAAATTGTCGACGGATAG 57.722 39.130 11.62 1.71 41.31 2.08
3941 5792 4.206200 GCCTACACAACAACAAAATTGTCG 59.794 41.667 0.00 0.00 41.31 4.35
4031 5882 6.145696 GCACTAATAAAGCCGTATCTAACCAG 59.854 42.308 0.00 0.00 0.00 4.00
4033 5884 5.987347 TGCACTAATAAAGCCGTATCTAACC 59.013 40.000 0.00 0.00 0.00 2.85
4042 5893 7.222975 AAGTGTGTTTTGCACTAATAAAGCCG 61.223 38.462 0.00 0.00 45.36 5.52
4049 5900 5.590530 TCCAAAGTGTGTTTTGCACTAAT 57.409 34.783 0.00 0.00 45.36 1.73
4050 5901 5.392767 TTCCAAAGTGTGTTTTGCACTAA 57.607 34.783 0.00 0.00 45.36 2.24
4076 5932 3.200825 AGCCTACACTGCACTCCATAAAT 59.799 43.478 0.00 0.00 0.00 1.40
4089 5945 0.475828 AAGAACCCCCAGCCTACACT 60.476 55.000 0.00 0.00 0.00 3.55
4212 6068 7.162761 TGTTCATTGTTAGTCCGAATTCCTTA 58.837 34.615 0.00 0.00 0.00 2.69
4251 6107 6.412362 ACCTCATAGACATCACCAGTAATC 57.588 41.667 0.00 0.00 0.00 1.75
4266 6122 7.495606 TCATTGTACTGTTGCAATACCTCATAG 59.504 37.037 0.59 0.00 36.02 2.23
4283 6139 7.604164 AGACTCGTTTCATTCATTCATTGTACT 59.396 33.333 0.00 0.00 0.00 2.73
4331 6187 9.826574 CCCTATCATCATGAAACAAAATTGAAT 57.173 29.630 0.00 0.00 0.00 2.57
4344 6200 7.341512 CAGAGCTCTAATACCCTATCATCATGA 59.658 40.741 17.75 0.00 0.00 3.07
4345 6201 7.341512 TCAGAGCTCTAATACCCTATCATCATG 59.658 40.741 17.75 0.00 0.00 3.07
4346 6202 7.417554 TCAGAGCTCTAATACCCTATCATCAT 58.582 38.462 17.75 0.00 0.00 2.45
4433 6291 3.742882 CAGTTGAAGAACAGATGCGAGAA 59.257 43.478 0.00 0.00 34.17 2.87
4436 6294 2.416747 CCAGTTGAAGAACAGATGCGA 58.583 47.619 0.00 0.00 34.17 5.10
4466 6324 6.655003 CCACTGTTGAGATTGTATGTAAACCT 59.345 38.462 0.00 0.00 0.00 3.50
4504 6362 6.537355 TGTCTTCATTCTTCACCTCTTCAAT 58.463 36.000 0.00 0.00 0.00 2.57
4543 6401 2.957402 TGTCCTGAGCTGAATGGTTT 57.043 45.000 0.00 0.00 0.00 3.27
4682 6540 0.676782 GTATTTGCCGCTCCACCTGT 60.677 55.000 0.00 0.00 0.00 4.00
4777 6635 2.502295 TGCATGTCATACAGCAACACA 58.498 42.857 0.00 0.00 32.32 3.72
4813 6672 2.787473 TTCGAACGGAGGGAGTAGTA 57.213 50.000 0.00 0.00 0.00 1.82
4819 6678 3.007182 ACAAGTAATTTCGAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
4820 6679 3.332034 ACAAGTAATTTCGAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
4821 6680 4.243270 AGACAAGTAATTTCGAACGGAGG 58.757 43.478 0.00 0.00 0.00 4.30
4822 6681 4.030306 CGAGACAAGTAATTTCGAACGGAG 59.970 45.833 0.00 0.00 33.38 4.63
4823 6682 3.916172 CGAGACAAGTAATTTCGAACGGA 59.084 43.478 0.00 0.00 33.38 4.69
4824 6683 3.060363 CCGAGACAAGTAATTTCGAACGG 59.940 47.826 0.00 0.00 33.38 4.44
4825 6684 3.916172 TCCGAGACAAGTAATTTCGAACG 59.084 43.478 0.00 0.00 33.38 3.95
4826 6685 5.834239 TTCCGAGACAAGTAATTTCGAAC 57.166 39.130 0.00 0.00 33.38 3.95
4827 6686 6.647481 TCATTTCCGAGACAAGTAATTTCGAA 59.353 34.615 0.00 0.00 33.38 3.71
4828 6687 6.160684 TCATTTCCGAGACAAGTAATTTCGA 58.839 36.000 0.00 0.00 33.38 3.71
4829 6688 6.403333 TCATTTCCGAGACAAGTAATTTCG 57.597 37.500 0.00 0.00 0.00 3.46
4830 6689 8.237267 ACAATCATTTCCGAGACAAGTAATTTC 58.763 33.333 0.00 0.00 0.00 2.17
4831 6690 8.110860 ACAATCATTTCCGAGACAAGTAATTT 57.889 30.769 0.00 0.00 0.00 1.82
4832 6691 7.687941 ACAATCATTTCCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
4833 6692 8.964476 ATACAATCATTTCCGAGACAAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
4834 6693 8.258007 AGATACAATCATTTCCGAGACAAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
4835 6694 7.782049 AGATACAATCATTTCCGAGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
4836 6695 6.644347 AGATACAATCATTTCCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
4837 6696 8.138074 TCTAGATACAATCATTTCCGAGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
4838 6697 8.007405 TCTAGATACAATCATTTCCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
4839 6698 7.582667 TCTAGATACAATCATTTCCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
4840 6699 8.138712 AGTTCTAGATACAATCATTTCCGAGAC 58.861 37.037 0.00 0.00 0.00 3.36
4841 6700 8.239038 AGTTCTAGATACAATCATTTCCGAGA 57.761 34.615 0.00 0.00 0.00 4.04
4842 6701 9.967346 TTAGTTCTAGATACAATCATTTCCGAG 57.033 33.333 0.00 0.00 0.00 4.63
4858 6717 9.117183 TGCATCTAGACGTATTTTAGTTCTAGA 57.883 33.333 8.64 8.64 38.94 2.43
4859 6718 9.900710 ATGCATCTAGACGTATTTTAGTTCTAG 57.099 33.333 0.00 0.00 0.00 2.43
4860 6719 9.894783 GATGCATCTAGACGTATTTTAGTTCTA 57.105 33.333 19.70 0.00 0.00 2.10
4861 6720 7.868415 GGATGCATCTAGACGTATTTTAGTTCT 59.132 37.037 25.28 0.00 0.00 3.01
4862 6721 7.652105 TGGATGCATCTAGACGTATTTTAGTTC 59.348 37.037 25.28 3.59 0.00 3.01
4863 6722 7.497595 TGGATGCATCTAGACGTATTTTAGTT 58.502 34.615 25.28 0.00 0.00 2.24
4864 6723 7.050970 TGGATGCATCTAGACGTATTTTAGT 57.949 36.000 25.28 0.00 0.00 2.24
4865 6724 8.539770 AATGGATGCATCTAGACGTATTTTAG 57.460 34.615 25.28 0.00 0.00 1.85
4866 6725 8.902540 AAATGGATGCATCTAGACGTATTTTA 57.097 30.769 25.28 0.00 0.00 1.52
4867 6726 7.807977 AAATGGATGCATCTAGACGTATTTT 57.192 32.000 25.28 12.25 0.00 1.82
4868 6727 7.307396 CGAAAATGGATGCATCTAGACGTATTT 60.307 37.037 25.28 12.91 0.00 1.40
4869 6728 6.146184 CGAAAATGGATGCATCTAGACGTATT 59.854 38.462 25.28 7.52 0.00 1.89
4870 6729 5.635280 CGAAAATGGATGCATCTAGACGTAT 59.365 40.000 25.28 1.05 0.00 3.06
4871 6730 4.982295 CGAAAATGGATGCATCTAGACGTA 59.018 41.667 25.28 5.08 0.00 3.57
4872 6731 3.804325 CGAAAATGGATGCATCTAGACGT 59.196 43.478 25.28 8.02 0.00 4.34
4873 6732 3.363378 GCGAAAATGGATGCATCTAGACG 60.363 47.826 25.28 21.15 0.00 4.18
4874 6733 3.363378 CGCGAAAATGGATGCATCTAGAC 60.363 47.826 25.28 9.96 0.00 2.59
4875 6734 2.802247 CGCGAAAATGGATGCATCTAGA 59.198 45.455 25.28 10.86 0.00 2.43
4876 6735 2.802247 TCGCGAAAATGGATGCATCTAG 59.198 45.455 25.28 9.06 0.00 2.43
4877 6736 2.543848 GTCGCGAAAATGGATGCATCTA 59.456 45.455 25.28 20.79 0.00 1.98
4878 6737 1.331756 GTCGCGAAAATGGATGCATCT 59.668 47.619 25.28 5.84 0.00 2.90
4879 6738 1.063912 TGTCGCGAAAATGGATGCATC 59.936 47.619 18.81 18.81 0.00 3.91
4880 6739 1.093972 TGTCGCGAAAATGGATGCAT 58.906 45.000 12.06 0.00 0.00 3.96
4881 6740 0.877743 TTGTCGCGAAAATGGATGCA 59.122 45.000 12.06 0.00 0.00 3.96
4882 6741 1.135689 ACTTGTCGCGAAAATGGATGC 60.136 47.619 13.05 0.00 0.00 3.91
4883 6742 2.900122 ACTTGTCGCGAAAATGGATG 57.100 45.000 13.05 2.76 0.00 3.51
4884 6743 5.448632 GGAATTACTTGTCGCGAAAATGGAT 60.449 40.000 13.05 3.91 0.00 3.41
4885 6744 4.142773 GGAATTACTTGTCGCGAAAATGGA 60.143 41.667 13.05 0.56 0.00 3.41
4886 6745 4.095610 GGAATTACTTGTCGCGAAAATGG 58.904 43.478 13.05 4.35 0.00 3.16
4887 6746 3.778718 CGGAATTACTTGTCGCGAAAATG 59.221 43.478 13.05 9.32 0.00 2.32
4888 6747 3.680937 TCGGAATTACTTGTCGCGAAAAT 59.319 39.130 13.05 5.74 0.00 1.82
4889 6748 3.058450 TCGGAATTACTTGTCGCGAAAA 58.942 40.909 12.06 12.01 0.00 2.29
4890 6749 2.674954 TCGGAATTACTTGTCGCGAAA 58.325 42.857 12.06 0.54 0.00 3.46
4891 6750 2.350899 TCGGAATTACTTGTCGCGAA 57.649 45.000 12.06 0.00 0.00 4.70
4892 6751 2.350899 TTCGGAATTACTTGTCGCGA 57.649 45.000 3.71 3.71 0.00 5.87
4893 6752 2.222729 CCTTTCGGAATTACTTGTCGCG 60.223 50.000 0.00 0.00 0.00 5.87
4894 6753 2.997986 TCCTTTCGGAATTACTTGTCGC 59.002 45.455 0.00 0.00 36.03 5.19
4895 6754 3.617263 CCTCCTTTCGGAATTACTTGTCG 59.383 47.826 0.00 0.00 39.29 4.35
4896 6755 3.939592 CCCTCCTTTCGGAATTACTTGTC 59.060 47.826 0.00 0.00 39.29 3.18
4897 6756 3.585732 TCCCTCCTTTCGGAATTACTTGT 59.414 43.478 0.00 0.00 39.29 3.16
4898 6757 4.192317 CTCCCTCCTTTCGGAATTACTTG 58.808 47.826 0.00 0.00 39.29 3.16
4899 6758 3.844804 ACTCCCTCCTTTCGGAATTACTT 59.155 43.478 0.00 0.00 39.29 2.24
4900 6759 3.451890 ACTCCCTCCTTTCGGAATTACT 58.548 45.455 0.00 0.00 39.29 2.24
4901 6760 3.908643 ACTCCCTCCTTTCGGAATTAC 57.091 47.619 0.00 0.00 39.29 1.89
4902 6761 3.708121 GGTACTCCCTCCTTTCGGAATTA 59.292 47.826 0.00 0.00 39.29 1.40
4903 6762 2.504585 GGTACTCCCTCCTTTCGGAATT 59.495 50.000 0.00 0.00 39.29 2.17
4904 6763 2.117051 GGTACTCCCTCCTTTCGGAAT 58.883 52.381 0.00 0.00 39.29 3.01
4905 6764 1.078324 AGGTACTCCCTCCTTTCGGAA 59.922 52.381 0.00 0.00 40.71 4.30
4906 6765 0.708802 AGGTACTCCCTCCTTTCGGA 59.291 55.000 0.00 0.00 40.71 4.55
4907 6766 0.824759 CAGGTACTCCCTCCTTTCGG 59.175 60.000 0.00 0.00 43.86 4.30
4908 6767 1.204941 CACAGGTACTCCCTCCTTTCG 59.795 57.143 0.00 0.00 43.86 3.46
4909 6768 2.028020 CACACAGGTACTCCCTCCTTTC 60.028 54.545 0.00 0.00 43.86 2.62
4910 6769 1.978580 CACACAGGTACTCCCTCCTTT 59.021 52.381 0.00 0.00 43.86 3.11
4911 6770 1.132817 ACACACAGGTACTCCCTCCTT 60.133 52.381 0.00 0.00 43.86 3.36
4912 6771 0.487772 ACACACAGGTACTCCCTCCT 59.512 55.000 0.00 0.00 43.86 3.69
4913 6772 2.226962 TACACACAGGTACTCCCTCC 57.773 55.000 0.00 0.00 43.86 4.30
4914 6773 2.895404 TGTTACACACAGGTACTCCCTC 59.105 50.000 0.00 0.00 43.86 4.30
4916 6775 3.975168 ATGTTACACACAGGTACTCCC 57.025 47.619 0.00 0.00 39.40 4.30
4917 6776 5.293569 GCATAATGTTACACACAGGTACTCC 59.706 44.000 0.00 0.00 39.40 3.85
4918 6777 5.293569 GGCATAATGTTACACACAGGTACTC 59.706 44.000 0.00 0.00 39.40 2.59
4919 6778 5.183228 GGCATAATGTTACACACAGGTACT 58.817 41.667 0.00 0.00 39.40 2.73
4920 6779 4.938832 TGGCATAATGTTACACACAGGTAC 59.061 41.667 0.00 0.00 39.40 3.34
4921 6780 5.167303 TGGCATAATGTTACACACAGGTA 57.833 39.130 0.00 0.00 39.40 3.08
4922 6781 4.027674 TGGCATAATGTTACACACAGGT 57.972 40.909 0.00 0.00 39.40 4.00
4923 6782 4.458989 AGTTGGCATAATGTTACACACAGG 59.541 41.667 0.00 0.00 39.40 4.00
4964 6823 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
4965 6824 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
4966 6825 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
4967 6826 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
4968 6827 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
4969 6828 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
4970 6829 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
4971 6830 2.030007 ACGACAAGTAATTCCGAACGGA 60.030 45.455 12.04 12.04 43.52 4.69
4972 6831 2.331194 ACGACAAGTAATTCCGAACGG 58.669 47.619 6.94 6.94 0.00 4.44
4973 6832 3.426191 TCAACGACAAGTAATTCCGAACG 59.574 43.478 0.00 0.00 0.00 3.95
4974 6833 4.977741 TCAACGACAAGTAATTCCGAAC 57.022 40.909 0.00 0.00 0.00 3.95
4975 6834 5.987777 TTTCAACGACAAGTAATTCCGAA 57.012 34.783 0.00 0.00 0.00 4.30
4976 6835 5.106869 CCATTTCAACGACAAGTAATTCCGA 60.107 40.000 0.00 0.00 0.00 4.55
4977 6836 5.086058 CCATTTCAACGACAAGTAATTCCG 58.914 41.667 0.00 0.00 0.00 4.30
4978 6837 6.249035 TCCATTTCAACGACAAGTAATTCC 57.751 37.500 0.00 0.00 0.00 3.01
4979 6838 7.305474 ACATCCATTTCAACGACAAGTAATTC 58.695 34.615 0.00 0.00 0.00 2.17
4980 6839 7.214467 ACATCCATTTCAACGACAAGTAATT 57.786 32.000 0.00 0.00 0.00 1.40
4981 6840 6.817765 ACATCCATTTCAACGACAAGTAAT 57.182 33.333 0.00 0.00 0.00 1.89
4982 6841 7.822334 AGATACATCCATTTCAACGACAAGTAA 59.178 33.333 0.00 0.00 0.00 2.24
4983 6842 7.327975 AGATACATCCATTTCAACGACAAGTA 58.672 34.615 0.00 0.00 0.00 2.24
4984 6843 6.173339 AGATACATCCATTTCAACGACAAGT 58.827 36.000 0.00 0.00 0.00 3.16
4985 6844 6.668541 AGATACATCCATTTCAACGACAAG 57.331 37.500 0.00 0.00 0.00 3.16
4986 6845 7.552459 TCTAGATACATCCATTTCAACGACAA 58.448 34.615 0.00 0.00 0.00 3.18
4987 6846 7.107639 TCTAGATACATCCATTTCAACGACA 57.892 36.000 0.00 0.00 0.00 4.35
4988 6847 7.203910 ACTCTAGATACATCCATTTCAACGAC 58.796 38.462 0.00 0.00 0.00 4.34
4989 6848 7.348080 ACTCTAGATACATCCATTTCAACGA 57.652 36.000 0.00 0.00 0.00 3.85
4990 6849 9.698309 AATACTCTAGATACATCCATTTCAACG 57.302 33.333 0.00 0.00 0.00 4.10
5019 6878 9.084533 GTCTAGGAAATGGATGTATCTAGAACT 57.915 37.037 0.00 0.00 35.16 3.01
5020 6879 8.861086 TGTCTAGGAAATGGATGTATCTAGAAC 58.139 37.037 0.00 0.00 35.16 3.01
5021 6880 9.434275 TTGTCTAGGAAATGGATGTATCTAGAA 57.566 33.333 0.00 0.00 35.16 2.10
5022 6881 9.083422 CTTGTCTAGGAAATGGATGTATCTAGA 57.917 37.037 0.00 0.00 32.17 2.43
5023 6882 8.865090 ACTTGTCTAGGAAATGGATGTATCTAG 58.135 37.037 0.00 0.00 0.00 2.43
5024 6883 8.783660 ACTTGTCTAGGAAATGGATGTATCTA 57.216 34.615 0.00 0.00 0.00 1.98
5025 6884 7.682787 ACTTGTCTAGGAAATGGATGTATCT 57.317 36.000 0.00 0.00 0.00 1.98
5028 6887 9.832445 GAATTACTTGTCTAGGAAATGGATGTA 57.168 33.333 0.00 0.00 28.13 2.29
5029 6888 7.775561 GGAATTACTTGTCTAGGAAATGGATGT 59.224 37.037 0.00 0.00 28.13 3.06
5030 6889 7.775093 TGGAATTACTTGTCTAGGAAATGGATG 59.225 37.037 0.00 0.00 28.13 3.51
5031 6890 7.872138 TGGAATTACTTGTCTAGGAAATGGAT 58.128 34.615 0.00 0.00 28.13 3.41
5032 6891 7.265599 TGGAATTACTTGTCTAGGAAATGGA 57.734 36.000 0.00 0.00 28.13 3.41
5033 6892 7.938140 TTGGAATTACTTGTCTAGGAAATGG 57.062 36.000 0.00 0.00 28.13 3.16
5034 6893 7.962918 CGTTTGGAATTACTTGTCTAGGAAATG 59.037 37.037 0.00 0.00 28.13 2.32
5035 6894 7.120726 CCGTTTGGAATTACTTGTCTAGGAAAT 59.879 37.037 0.00 0.00 37.49 2.17
5036 6895 6.428771 CCGTTTGGAATTACTTGTCTAGGAAA 59.571 38.462 0.00 0.00 37.49 3.13
5037 6896 5.935789 CCGTTTGGAATTACTTGTCTAGGAA 59.064 40.000 0.00 0.00 37.49 3.36
5038 6897 5.246656 TCCGTTTGGAATTACTTGTCTAGGA 59.753 40.000 0.00 0.00 42.85 2.94
5039 6898 5.484715 TCCGTTTGGAATTACTTGTCTAGG 58.515 41.667 0.00 0.00 42.85 3.02
5040 6899 5.581085 CCTCCGTTTGGAATTACTTGTCTAG 59.419 44.000 0.00 0.00 45.87 2.43
5041 6900 5.484715 CCTCCGTTTGGAATTACTTGTCTA 58.515 41.667 0.00 0.00 45.87 2.59
5042 6901 4.324267 CCTCCGTTTGGAATTACTTGTCT 58.676 43.478 0.00 0.00 45.87 3.41
5043 6902 3.439129 CCCTCCGTTTGGAATTACTTGTC 59.561 47.826 0.00 0.00 45.87 3.18
5044 6903 3.073356 TCCCTCCGTTTGGAATTACTTGT 59.927 43.478 0.00 0.00 45.87 3.16
5045 6904 3.681593 TCCCTCCGTTTGGAATTACTTG 58.318 45.455 0.00 0.00 45.87 3.16
5046 6905 3.329814 ACTCCCTCCGTTTGGAATTACTT 59.670 43.478 0.00 0.00 45.87 2.24
5047 6906 2.910977 ACTCCCTCCGTTTGGAATTACT 59.089 45.455 0.00 0.00 45.87 2.24
5048 6907 3.345508 ACTCCCTCCGTTTGGAATTAC 57.654 47.619 0.00 0.00 45.87 1.89
5049 6908 6.811634 TTATACTCCCTCCGTTTGGAATTA 57.188 37.500 0.00 0.00 45.87 1.40
5050 6909 5.703730 TTATACTCCCTCCGTTTGGAATT 57.296 39.130 0.00 0.00 45.87 2.17
5051 6910 5.397559 CCTTTATACTCCCTCCGTTTGGAAT 60.398 44.000 0.00 0.00 45.87 3.01
5052 6911 4.080751 CCTTTATACTCCCTCCGTTTGGAA 60.081 45.833 0.00 0.00 45.87 3.53
5053 6912 3.453353 CCTTTATACTCCCTCCGTTTGGA 59.547 47.826 0.00 0.00 43.88 3.53
5054 6913 3.453353 TCCTTTATACTCCCTCCGTTTGG 59.547 47.826 0.00 0.00 0.00 3.28
5055 6914 4.748277 TCCTTTATACTCCCTCCGTTTG 57.252 45.455 0.00 0.00 0.00 2.93
5056 6915 4.383880 GCTTCCTTTATACTCCCTCCGTTT 60.384 45.833 0.00 0.00 0.00 3.60
5057 6916 3.134262 GCTTCCTTTATACTCCCTCCGTT 59.866 47.826 0.00 0.00 0.00 4.44
5058 6917 2.699321 GCTTCCTTTATACTCCCTCCGT 59.301 50.000 0.00 0.00 0.00 4.69
5059 6918 2.698797 TGCTTCCTTTATACTCCCTCCG 59.301 50.000 0.00 0.00 0.00 4.63
5060 6919 4.772886 TTGCTTCCTTTATACTCCCTCC 57.227 45.455 0.00 0.00 0.00 4.30
5061 6920 7.041030 GCTTTATTGCTTCCTTTATACTCCCTC 60.041 40.741 0.00 0.00 0.00 4.30
5062 6921 6.773200 GCTTTATTGCTTCCTTTATACTCCCT 59.227 38.462 0.00 0.00 0.00 4.20
5063 6922 6.546034 TGCTTTATTGCTTCCTTTATACTCCC 59.454 38.462 0.00 0.00 0.00 4.30
5064 6923 7.568199 TGCTTTATTGCTTCCTTTATACTCC 57.432 36.000 0.00 0.00 0.00 3.85
5065 6924 8.678199 AGTTGCTTTATTGCTTCCTTTATACTC 58.322 33.333 0.00 0.00 0.00 2.59
5066 6925 8.462016 CAGTTGCTTTATTGCTTCCTTTATACT 58.538 33.333 0.00 0.00 0.00 2.12
5067 6926 8.458843 TCAGTTGCTTTATTGCTTCCTTTATAC 58.541 33.333 0.00 0.00 0.00 1.47
5185 7050 6.422400 GGTGAAGTTAGAACAGAGTTTGAGAG 59.578 42.308 0.00 0.00 0.00 3.20
5275 7140 2.154462 GTCCTTGACTTGTGGACATGG 58.846 52.381 6.52 0.00 46.79 3.66
5313 7178 2.480037 TCAGTTTCGCTGCACATACTTG 59.520 45.455 0.00 0.00 44.66 3.16
5348 7213 3.188667 TCGATAGCTTACACGATAGGCAG 59.811 47.826 0.00 0.00 43.77 4.85
5369 7234 4.500035 GCTACCTGCAGTTGGAGTATACTC 60.500 50.000 22.47 22.47 42.31 2.59
5370 7235 3.385111 GCTACCTGCAGTTGGAGTATACT 59.615 47.826 13.81 4.68 42.31 2.12
5441 7306 1.234821 CGCTGTGAAGTGGGCTTTAA 58.765 50.000 0.00 0.00 34.61 1.52
5462 7327 3.608008 GCAGTTTCCAGAAAGCGAAGAAG 60.608 47.826 0.00 0.00 0.00 2.85
5473 7338 0.482446 ATTGGGGTGCAGTTTCCAGA 59.518 50.000 0.00 0.00 0.00 3.86
5656 7521 4.588899 TGCTAGGCTGCTGAAAATAAGAA 58.411 39.130 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.