AutoCloner

Multiple sequence alignment - TraesCS3B01G324700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3B01G324700	chr3B	100.000	6984	0	0	1	6984	525641323	525634340	0.000000e+00	12898.0
1	TraesCS3B01G324700	chr3B	91.985	549	27	8	4502	5048	641658913	641659446	0.000000e+00	754.0
2	TraesCS3B01G324700	chr3B	88.927	289	30	2	6473	6761	377115120	377115406	8.620000e-94	355.0
3	TraesCS3B01G324700	chr3B	95.181	166	7	1	4310	4475	641658679	641658843	1.930000e-65	261.0
4	TraesCS3B01G324700	chr3B	78.286	175	27	8	6299	6468	560875386	560875554	1.240000e-17	102.0
5	TraesCS3B01G324700	chr3B	100.000	34	0	0	4422	4455	525636853	525636820	5.850000e-06	63.9
6	TraesCS3B01G324700	chr3B	100.000	34	0	0	4471	4504	525636902	525636869	5.850000e-06	63.9
7	TraesCS3B01G324700	chr3B	100.000	34	0	0	4471	4504	641658790	641658823	5.850000e-06	63.9
8	TraesCS3B01G324700	chr7B	98.316	2375	18	2	2697	5049	232211309	232213683	0.000000e+00	4145.0
9	TraesCS3B01G324700	chr7B	98.425	127	2	0	1585	1711	336361086	336360960	2.540000e-54	224.0
10	TraesCS3B01G324700	chr7B	97.656	128	3	0	1587	1714	534538111	534538238	3.280000e-53	220.0
11	TraesCS3B01G324700	chr7B	85.542	83	12	0	4228	4310	23957628	23957710	3.470000e-13	87.9
12	TraesCS3B01G324700	chr7B	100.000	34	0	0	4471	4504	232213056	232213089	5.850000e-06	63.9
13	TraesCS3B01G324700	chr7B	100.000	34	0	0	4422	4455	232213105	232213138	5.850000e-06	63.9
14	TraesCS3B01G324700	chr7B	81.928	83	8	3	6384	6463	453153595	453153673	5.850000e-06	63.9
15	TraesCS3B01G324700	chr3D	90.293	1504	79	34	106	1572	399859866	399858393	0.000000e+00	1906.0
16	TraesCS3B01G324700	chr3D	95.913	1150	37	5	5052	6191	399857459	399856310	0.000000e+00	1855.0
17	TraesCS3B01G324700	chr3D	95.817	526	18	2	2176	2699	399857986	399857463	0.000000e+00	846.0
18	TraesCS3B01G324700	chr3D	90.751	346	20	5	1709	2046	399858393	399858052	1.070000e-122	451.0
19	TraesCS3B01G324700	chr3D	80.517	580	69	26	4492	5053	34265560	34266113	8.440000e-109	405.0
20	TraesCS3B01G324700	chr3D	86.454	251	24	5	6220	6467	399856312	399856069	4.150000e-67	267.0
21	TraesCS3B01G324700	chr3D	82.482	137	21	2	6758	6893	483192085	483192219	4.430000e-22	117.0
22	TraesCS3B01G324700	chr3D	81.295	139	21	4	6760	6896	585980097	585979962	2.660000e-19	108.0
23	TraesCS3B01G324700	chr2A	94.805	1001	26	5	2699	3677	768054482	768055478	0.000000e+00	1537.0
24	TraesCS3B01G324700	chr2A	97.222	540	13	2	3670	4207	768055788	768056327	0.000000e+00	913.0
25	TraesCS3B01G324700	chr2A	93.478	138	8	1	4174	4310	768056320	768056457	3.300000e-48	204.0
26	TraesCS3B01G324700	chr2A	78.409	176	27	8	6298	6468	72933233	72933402	3.450000e-18	104.0
27	TraesCS3B01G324700	chr2A	83.077	65	8	2	6772	6836	206641288	206641227	1.000000e-03	56.5
28	TraesCS3B01G324700	chr2A	83.077	65	8	2	6772	6836	206644452	206644391	1.000000e-03	56.5
29	TraesCS3B01G324700	chr3A	88.114	1018	55	32	1709	2702	519085241	519084266	0.000000e+00	1149.0
30	TraesCS3B01G324700	chr3A	92.828	488	30	3	100	582	519087092	519086605	0.000000e+00	702.0
31	TraesCS3B01G324700	chr3A	95.952	420	13	2	5772	6191	519083233	519082818	0.000000e+00	678.0
32	TraesCS3B01G324700	chr3A	96.409	362	11	2	5391	5750	519083903	519083542	4.660000e-166	595.0
33	TraesCS3B01G324700	chr3A	92.371	367	16	5	5048	5414	519084268	519083914	4.830000e-141	512.0
34	TraesCS3B01G324700	chr3A	89.474	399	22	10	587	968	519086282	519085887	2.930000e-133	486.0
35	TraesCS3B01G324700	chr3A	87.000	300	34	3	6472	6771	742046200	742045906	4.040000e-87	333.0
36	TraesCS3B01G324700	chr3A	89.157	249	24	2	6220	6468	519082820	519082575	2.450000e-79	307.0
37	TraesCS3B01G324700	chr3A	79.452	511	44	34	973	1462	519085846	519085376	8.800000e-79	305.0
38	TraesCS3B01G324700	chr3A	79.769	173	26	4	6298	6467	585478499	585478665	4.430000e-22	117.0
39	TraesCS3B01G324700	chr3A	79.851	134	21	5	6760	6891	681813874	681814003	7.460000e-15	93.5
40	TraesCS3B01G324700	chr5B	91.562	640	34	4	3669	4307	547980265	547980885	0.000000e+00	865.0
41	TraesCS3B01G324700	chr5B	92.291	454	27	4	2699	3150	547979344	547979791	7.640000e-179	638.0
42	TraesCS3B01G324700	chr5B	86.596	470	31	6	3188	3627	547979795	547980262	2.260000e-134	490.0
43	TraesCS3B01G324700	chr5B	88.542	288	30	3	6473	6760	62971019	62971303	5.190000e-91	346.0
44	TraesCS3B01G324700	chr5B	100.000	30	0	0	4309	4338	694802755	694802726	1.000000e-03	56.5
45	TraesCS3B01G324700	chr2B	87.432	740	61	17	4309	5048	5322375	5321668	0.000000e+00	822.0
46	TraesCS3B01G324700	chr2B	80.228	526	52	35	4542	5048	690805920	690806412	1.440000e-91	348.0
47	TraesCS3B01G324700	chr2B	98.425	127	2	0	1585	1711	24197274	24197148	2.540000e-54	224.0
48	TraesCS3B01G324700	chr2B	85.567	97	13	1	4224	4320	638005818	638005723	4.460000e-17	100.0
49	TraesCS3B01G324700	chr2B	80.000	120	18	4	4309	4423	613215561	613215443	4.490000e-12	84.2
50	TraesCS3B01G324700	chr4D	90.764	563	43	5	2741	3299	366972795	366972238	0.000000e+00	743.0
51	TraesCS3B01G324700	chr4D	88.235	289	31	3	6473	6760	301140981	301141267	6.710000e-90	342.0
52	TraesCS3B01G324700	chr4D	83.158	95	14	2	4229	4322	366971376	366971283	1.250000e-12	86.1
53	TraesCS3B01G324700	chr1D	89.286	560	38	10	2744	3300	122530730	122530190	0.000000e+00	682.0
54	TraesCS3B01G324700	chr1D	93.421	456	23	3	2699	3153	376276883	376276434	0.000000e+00	669.0
55	TraesCS3B01G324700	chr1D	85.835	473	27	8	3188	3630	376276433	376275971	3.820000e-127	466.0
56	TraesCS3B01G324700	chr1D	88.630	343	23	4	3954	4295	376275469	376275142	3.030000e-108	403.0
57	TraesCS3B01G324700	chr1D	88.927	289	16	1	3669	3957	376275971	376275699	6.710000e-90	342.0
58	TraesCS3B01G324700	chr1D	97.692	130	2	1	1581	1710	481558085	481558213	9.120000e-54	222.0
59	TraesCS3B01G324700	chr1D	98.400	125	2	0	1585	1709	72884323	72884447	3.280000e-53	220.0
60	TraesCS3B01G324700	chr1D	83.077	65	9	1	6772	6836	349968068	349968130	2.720000e-04	58.4
61	TraesCS3B01G324700	chr6B	89.504	524	38	11	2741	3252	93326259	93326777	0.000000e+00	647.0
62	TraesCS3B01G324700	chr6B	96.269	134	3	2	1580	1711	96877415	96877548	1.180000e-52	219.0
63	TraesCS3B01G324700	chr6B	97.500	40	1	0	2698	2737	93326131	93326170	1.260000e-07	69.4
64	TraesCS3B01G324700	chr6B	79.000	100	17	2	6803	6898	707532956	707532857	1.630000e-06	65.8
65	TraesCS3B01G324700	chr7A	90.123	486	40	6	4568	5051	63085710	63086189	5.950000e-175	625.0
66	TraesCS3B01G324700	chr7A	91.076	437	32	3	2866	3300	657677907	657677476	1.010000e-162	584.0
67	TraesCS3B01G324700	chr7A	91.566	166	9	4	4309	4474	63085445	63085605	2.540000e-54	224.0
68	TraesCS3B01G324700	chr7A	98.400	125	2	0	1586	1710	124067182	124067306	3.280000e-53	220.0
69	TraesCS3B01G324700	chr7A	93.151	73	4	1	2741	2812	657677995	657677923	9.580000e-19	106.0
70	TraesCS3B01G324700	chr7A	86.364	88	11	1	4233	4320	721390001	721389915	2.070000e-15	95.3
71	TraesCS3B01G324700	chr7A	100.000	39	0	0	4502	4540	63085671	63085709	9.720000e-09	73.1
72	TraesCS3B01G324700	chr1A	89.016	437	41	3	2866	3300	290122887	290122456	1.030000e-147	534.0
73	TraesCS3B01G324700	chr1A	81.239	565	65	23	4508	5054	1796867	1797408	1.080000e-112	418.0
74	TraesCS3B01G324700	chr1B	79.710	552	80	22	4520	5047	507164066	507163523	3.080000e-98	370.0
75	TraesCS3B01G324700	chr1B	79.821	560	67	28	4508	5047	291055249	291054716	3.980000e-97	366.0
76	TraesCS3B01G324700	chr5D	89.860	286	28	1	6473	6758	7559993	7559709	3.980000e-97	366.0
77	TraesCS3B01G324700	chr5D	88.667	300	31	3	6472	6771	451067430	451067134	5.150000e-96	363.0
78	TraesCS3B01G324700	chr5D	86.755	302	38	2	6473	6773	132472919	132472619	1.120000e-87	335.0
79	TraesCS3B01G324700	chr5D	90.000	50	3	2	2699	2747	399933859	399933907	5.850000e-06	63.9
80	TraesCS3B01G324700	chr6D	86.901	313	38	2	6473	6785	327021869	327022178	1.440000e-91	348.0
81	TraesCS3B01G324700	chr6D	82.836	134	21	1	6760	6893	193623048	193623179	1.230000e-22	119.0
82	TraesCS3B01G324700	chr5A	87.129	303	35	4	6472	6773	40616309	40616010	2.410000e-89	340.0
83	TraesCS3B01G324700	chr5A	83.060	183	22	7	4301	4475	7711895	7712076	2.610000e-34	158.0
84	TraesCS3B01G324700	chr5A	86.585	82	10	1	6809	6889	621021960	621022041	9.650000e-14	89.8
85	TraesCS3B01G324700	chr5A	93.750	48	0	3	2686	2732	24129195	24129240	1.260000e-07	69.4
86	TraesCS3B01G324700	chr5A	90.000	50	5	0	2686	2735	706063512	706063463	1.630000e-06	65.8
87	TraesCS3B01G324700	chr4A	98.413	126	2	0	1586	1711	8592681	8592556	9.120000e-54	222.0
88	TraesCS3B01G324700	chr4A	97.638	127	3	0	1585	1711	46560536	46560410	1.180000e-52	219.0
89	TraesCS3B01G324700	chr4B	84.000	150	19	5	3194	3339	471714353	471714205	9.450000e-29	139.0
90	TraesCS3B01G324700	chr4B	86.957	92	11	1	4228	4319	529972863	529972773	1.240000e-17	102.0
91	TraesCS3B01G324700	chr4B	96.970	33	1	0	4306	4338	339365673	339365641	1.000000e-03	56.5
92	TraesCS3B01G324700	chr2D	87.500	80	8	2	4232	4310	143500710	143500788	2.680000e-14	91.6
93	TraesCS3B01G324700	chr2D	83.077	65	9	1	6772	6836	206400328	206400266	2.720000e-04	58.4
94	TraesCS3B01G324700	chr6A	86.111	72	8	2	6397	6468	491029482	491029413	7.510000e-10	76.8
95	TraesCS3B01G324700	chrUn	95.238	42	2	0	2698	2739	293670699	293670658	4.520000e-07	67.6

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3B01G324700	chr3B	525634340	525641323	6983	True	12898.000000	12898	100.000000	1	6984	1	chr3B.!!$R1	6983
1	TraesCS3B01G324700	chr3B	641658679	641659446	767	False	359.633333	754	95.722000	4310	5048	3	chr3B.!!$F3	738
2	TraesCS3B01G324700	chr7B	232211309	232213683	2374	False	1424.266667	4145	99.438667	2697	5049	3	chr7B.!!$F4	2352
3	TraesCS3B01G324700	chr3D	399856069	399859866	3797	True	1065.000000	1906	91.845600	106	6467	5	chr3D.!!$R2	6361
4	TraesCS3B01G324700	chr3D	34265560	34266113	553	False	405.000000	405	80.517000	4492	5053	1	chr3D.!!$F1	561
5	TraesCS3B01G324700	chr2A	768054482	768056457	1975	False	884.666667	1537	95.168333	2699	4310	3	chr2A.!!$F2	1611
6	TraesCS3B01G324700	chr3A	519082575	519087092	4517	True	591.750000	1149	90.469625	100	6468	8	chr3A.!!$R2	6368
7	TraesCS3B01G324700	chr5B	547979344	547980885	1541	False	664.333333	865	90.149667	2699	4307	3	chr5B.!!$F2	1608
8	TraesCS3B01G324700	chr2B	5321668	5322375	707	True	822.000000	822	87.432000	4309	5048	1	chr2B.!!$R1	739
9	TraesCS3B01G324700	chr4D	366971283	366972795	1512	True	414.550000	743	86.961000	2741	4322	2	chr4D.!!$R1	1581
10	TraesCS3B01G324700	chr1D	122530190	122530730	540	True	682.000000	682	89.286000	2744	3300	1	chr1D.!!$R1	556
11	TraesCS3B01G324700	chr1D	376275142	376276883	1741	True	470.000000	669	89.203250	2699	4295	4	chr1D.!!$R2	1596
12	TraesCS3B01G324700	chr6B	93326131	93326777	646	False	358.200000	647	93.502000	2698	3252	2	chr6B.!!$F2	554
13	TraesCS3B01G324700	chr7A	657677476	657677995	519	True	345.000000	584	92.113500	2741	3300	2	chr7A.!!$R2	559
14	TraesCS3B01G324700	chr7A	63085445	63086189	744	False	307.366667	625	93.896333	4309	5051	3	chr7A.!!$F2	742
15	TraesCS3B01G324700	chr1A	1796867	1797408	541	False	418.000000	418	81.239000	4508	5054	1	chr1A.!!$F1	546
16	TraesCS3B01G324700	chr1B	507163523	507164066	543	True	370.000000	370	79.710000	4520	5047	1	chr1B.!!$R2	527
17	TraesCS3B01G324700	chr1B	291054716	291055249	533	True	366.000000	366	79.821000	4508	5047	1	chr1B.!!$R1	539

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
68	69	0.041238	ATCCCGGAGAGAGGTGTTCA	59.959	55.0	0.73	0.00	3.18	F
1462	1902	0.108615	CTGCTAGGGACACTCCAACG	60.109	60.0	0.00	38.64	4.10	F
1700	2161	0.108615	CCTGCAGTACGTCAGGGAAG	60.109	60.0	21.58	44.64	3.46	F
2170	2665	0.257905	AAAGGCCCCCTCGGAAATAC	59.742	55.0	0.00	30.89	1.89	F
3642	4758	0.670546	CTTCCAGCACACCCTGTACG	60.671	60.0	0.00	0.00	3.67	F
5326	7124	1.561643	ACCTGTAGCTGCTTAGCTGA	58.438	50.0	15.16	45.81	4.26	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1497	1937	0.099613	CATCGAGCAGCTAGTCGTGT	59.900	55.000	14.61	4.83	37.46	4.49	R
3445	4552	1.956477	GCCTTCCATGTGTGAGTGTTT	59.044	47.619	0.00	0.00	0.00	2.83	R
3642	4758	3.482783	GACGCTCGTGGCTTGCTC	61.483	66.667	0.00	0.00	39.13	4.26	R
3915	5351	2.306805	TGAGCAGGTCCATGTTGAGATT	59.693	45.455	0.00	0.00	0.00	2.40	R
5452	7285	1.002624	ACATGTACCTGTTGGCGGG	60.003	57.895	0.00	0.00	46.63	6.13	R
6934	9060	0.111835	GCTCAACACGTTCGTCGAAC	60.112	55.000	24.91	24.91	42.86	3.95	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Show entries

Search:

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	End Stability
35	36	3.185365	CGCTCGGTTGCACGCATA	61.185	61.111	0.00	0.00	3.14
36	37	2.525248	CGCTCGGTTGCACGCATAT	61.525	57.895	0.00	0.00	1.78
37	38	1.212455	CGCTCGGTTGCACGCATATA	61.212	55.000	0.00	0.00	0.86
38	39	1.148310	GCTCGGTTGCACGCATATAT	58.852	50.000	0.00	0.00	0.86
39	40	1.136252	GCTCGGTTGCACGCATATATG	60.136	52.381	8.45	8.45	1.78
40	41	2.403259	CTCGGTTGCACGCATATATGA	58.597	47.619	17.10	0.00	2.15
41	42	2.799978	CTCGGTTGCACGCATATATGAA	59.200	45.455	17.10	0.00	2.57
42	43	3.398406	TCGGTTGCACGCATATATGAAT	58.602	40.909	17.10	0.06	2.57
43	44	3.186205	TCGGTTGCACGCATATATGAATG	59.814	43.478	17.10	13.38	2.67
44	45	3.186205	CGGTTGCACGCATATATGAATGA	59.814	43.478	17.10	1.93	2.57
45	46	4.319405	CGGTTGCACGCATATATGAATGAA	60.319	41.667	17.10	5.16	2.57
46	47	5.617529	CGGTTGCACGCATATATGAATGAAT	60.618	40.000	17.10	0.00	2.57
47	48	6.402011	CGGTTGCACGCATATATGAATGAATA	60.402	38.462	17.10	1.89	1.75
48	49	7.304735	GGTTGCACGCATATATGAATGAATAA	58.695	34.615	17.10	6.99	1.40
49	50	7.807433	GGTTGCACGCATATATGAATGAATAAA	59.193	33.333	17.10	4.38	1.40
50	51	9.345517	GTTGCACGCATATATGAATGAATAAAT	57.654	29.630	17.10	0.00	1.40
51	52	9.558648	TTGCACGCATATATGAATGAATAAATC	57.441	29.630	17.10	0.48	2.17
52	53	8.183536	TGCACGCATATATGAATGAATAAATCC	58.816	33.333	17.10	0.00	3.01
53	54	7.645340	GCACGCATATATGAATGAATAAATCCC	59.355	37.037	17.10	0.00	3.85
54	55	7.852454	CACGCATATATGAATGAATAAATCCCG	59.148	37.037	17.10	7.36	5.14
55	56	7.012327	ACGCATATATGAATGAATAAATCCCGG	59.988	37.037	17.10	0.00	5.73
56	57	7.226523	CGCATATATGAATGAATAAATCCCGGA	59.773	37.037	17.10	0.00	5.14
57	58	8.562892	GCATATATGAATGAATAAATCCCGGAG	58.437	37.037	17.10	0.00	4.63
58	59	9.836864	CATATATGAATGAATAAATCCCGGAGA	57.163	33.333	0.73	0.00	3.71
60	61	5.887214	TGAATGAATAAATCCCGGAGAGA	57.113	39.130	0.73	0.00	3.10

Showing 1 to 25 of 494 entries

Previous1 2 3 4 5…20Next

Show entries

Search:

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
18	19	1.212455	TATATGCGTGCAACCGAGCG	61.212	55.000	0.00	0.00	37.31	5.03
19	20	1.136252	CATATATGCGTGCAACCGAGC	60.136	52.381	0.00	0.00	0.00	5.03
20	21	2.403259	TCATATATGCGTGCAACCGAG	58.597	47.619	7.92	0.00	0.00	4.63
21	22	2.517650	TCATATATGCGTGCAACCGA	57.482	45.000	7.92	0.00	0.00	4.69
22	23	3.186205	TCATTCATATATGCGTGCAACCG	59.814	43.478	7.92	0.00	0.00	4.44
23	24	4.747540	TCATTCATATATGCGTGCAACC	57.252	40.909	7.92	0.00	0.00	3.77
24	25	8.726650	TTTATTCATTCATATATGCGTGCAAC	57.273	30.769	7.92	0.00	0.00	4.17
25	26	9.558648	GATTTATTCATTCATATATGCGTGCAA	57.441	29.630	7.92	0.00	0.00	4.08
26	27	8.183536	GGATTTATTCATTCATATATGCGTGCA	58.816	33.333	7.92	0.00	0.00	4.57
27	28	7.645340	GGGATTTATTCATTCATATATGCGTGC	59.355	37.037	7.92	0.00	0.00	5.34
28	29	7.852454	CGGGATTTATTCATTCATATATGCGTG	59.148	37.037	7.92	8.92	0.00	5.34
29	30	7.012327	CCGGGATTTATTCATTCATATATGCGT	59.988	37.037	7.92	0.00	0.00	5.24
30	31	7.226523	TCCGGGATTTATTCATTCATATATGCG	59.773	37.037	7.92	0.94	0.00	4.73
31	32	8.450578	TCCGGGATTTATTCATTCATATATGC	57.549	34.615	7.92	0.00	0.00	3.14
32	33	9.836864	TCTCCGGGATTTATTCATTCATATATG	57.163	33.333	6.36	6.36	0.00	1.78
34	35	9.267071	TCTCTCCGGGATTTATTCATTCATATA	57.733	33.333	0.00	0.00	0.00	0.86
35	36	8.150827	TCTCTCCGGGATTTATTCATTCATAT	57.849	34.615	0.00	0.00	0.00	1.78
36	37	7.310671	CCTCTCTCCGGGATTTATTCATTCATA	60.311	40.741	0.00	0.00	0.00	2.15
37	38	6.439636	TCTCTCCGGGATTTATTCATTCAT	57.560	37.500	0.00	0.00	0.00	2.57
38	39	5.221722	CCTCTCTCCGGGATTTATTCATTCA	60.222	44.000	0.00	0.00	0.00	2.57
39	40	5.221742	ACCTCTCTCCGGGATTTATTCATTC	60.222	44.000	0.00	0.00	0.00	2.67
40	41	4.660771	ACCTCTCTCCGGGATTTATTCATT	59.339	41.667	0.00	0.00	0.00	2.57
41	42	4.040952	CACCTCTCTCCGGGATTTATTCAT	59.959	45.833	0.00	0.00	0.00	2.57
42	43	3.388024	CACCTCTCTCCGGGATTTATTCA	59.612	47.826	0.00	0.00	0.00	2.57
43	44	3.388350	ACACCTCTCTCCGGGATTTATTC	59.612	47.826	0.00	0.00	0.00	1.75

Showing 1 to 25 of 483 entries

Previous1 2 3 4 5…20Next

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.