Multiple sequence alignment - TraesCS3B01G324300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G324300 | chr3B | 100.000 | 9586 | 0 | 0 | 1 | 9586 | 525227190 | 525236775 | 0.000000e+00 | 17703.0 |
1 | TraesCS3B01G324300 | chr3B | 98.623 | 3631 | 35 | 5 | 1653 | 5282 | 291298569 | 291302185 | 0.000000e+00 | 6414.0 |
2 | TraesCS3B01G324300 | chr3B | 98.697 | 2302 | 27 | 3 | 1654 | 3953 | 24912647 | 24914947 | 0.000000e+00 | 4082.0 |
3 | TraesCS3B01G324300 | chr3B | 99.102 | 1447 | 13 | 0 | 3834 | 5280 | 24915162 | 24916608 | 0.000000e+00 | 2601.0 |
4 | TraesCS3B01G324300 | chr3B | 81.766 | 1042 | 109 | 42 | 3708 | 4714 | 64546964 | 64547959 | 0.000000e+00 | 797.0 |
5 | TraesCS3B01G324300 | chr3B | 90.941 | 287 | 25 | 1 | 435 | 720 | 17350286 | 17350572 | 1.510000e-102 | 385.0 |
6 | TraesCS3B01G324300 | chr3B | 92.188 | 64 | 5 | 0 | 6140 | 6203 | 696852797 | 696852860 | 3.690000e-14 | 91.6 |
7 | TraesCS3B01G324300 | chr3B | 100.000 | 29 | 0 | 0 | 5281 | 5309 | 40167449 | 40167421 | 5.000000e-03 | 54.7 |
8 | TraesCS3B01G324300 | chr4A | 99.146 | 3628 | 27 | 3 | 1654 | 5280 | 735782653 | 735786277 | 0.000000e+00 | 6525.0 |
9 | TraesCS3B01G324300 | chr4A | 88.964 | 1486 | 115 | 11 | 1654 | 3094 | 630149248 | 630147767 | 0.000000e+00 | 1790.0 |
10 | TraesCS3B01G324300 | chr1B | 99.118 | 3629 | 30 | 2 | 1654 | 5281 | 636744571 | 636748198 | 0.000000e+00 | 6523.0 |
11 | TraesCS3B01G324300 | chr1B | 91.244 | 217 | 19 | 0 | 1022 | 1238 | 652458939 | 652458723 | 7.280000e-76 | 296.0 |
12 | TraesCS3B01G324300 | chr1B | 84.615 | 182 | 23 | 5 | 4709 | 4889 | 645726221 | 645726398 | 9.890000e-40 | 176.0 |
13 | TraesCS3B01G324300 | chr7B | 98.821 | 3646 | 41 | 2 | 1644 | 5287 | 254707301 | 254703656 | 0.000000e+00 | 6493.0 |
14 | TraesCS3B01G324300 | chr7B | 98.788 | 3630 | 41 | 3 | 1653 | 5280 | 91246112 | 91249740 | 0.000000e+00 | 6457.0 |
15 | TraesCS3B01G324300 | chr7B | 91.489 | 282 | 23 | 1 | 439 | 719 | 460381403 | 460381684 | 4.200000e-103 | 387.0 |
16 | TraesCS3B01G324300 | chr7B | 92.694 | 219 | 15 | 1 | 1016 | 1233 | 501508501 | 501508719 | 2.010000e-81 | 315.0 |
17 | TraesCS3B01G324300 | chr7B | 81.295 | 139 | 22 | 3 | 6660 | 6796 | 630149785 | 630149921 | 1.020000e-19 | 110.0 |
18 | TraesCS3B01G324300 | chr7B | 100.000 | 29 | 0 | 0 | 5281 | 5309 | 220139338 | 220139366 | 5.000000e-03 | 54.7 |
19 | TraesCS3B01G324300 | chr2A | 98.401 | 3627 | 36 | 10 | 1656 | 5281 | 605116274 | 605119879 | 0.000000e+00 | 6357.0 |
20 | TraesCS3B01G324300 | chr2A | 89.073 | 302 | 31 | 2 | 421 | 720 | 753401348 | 753401649 | 3.270000e-99 | 374.0 |
21 | TraesCS3B01G324300 | chr3D | 94.544 | 1558 | 44 | 16 | 7607 | 9140 | 399375992 | 399377532 | 0.000000e+00 | 2368.0 |
22 | TraesCS3B01G324300 | chr3D | 95.223 | 921 | 25 | 4 | 748 | 1651 | 399370293 | 399371211 | 0.000000e+00 | 1439.0 |
23 | TraesCS3B01G324300 | chr3D | 93.528 | 618 | 27 | 4 | 6825 | 7442 | 399374155 | 399374759 | 0.000000e+00 | 907.0 |
24 | TraesCS3B01G324300 | chr3D | 90.836 | 622 | 21 | 8 | 5307 | 5919 | 399371214 | 399371808 | 0.000000e+00 | 800.0 |
25 | TraesCS3B01G324300 | chr3D | 94.318 | 440 | 16 | 6 | 1 | 436 | 399369853 | 399370287 | 0.000000e+00 | 665.0 |
26 | TraesCS3B01G324300 | chr3D | 89.655 | 377 | 30 | 6 | 6050 | 6419 | 399373272 | 399373646 | 1.130000e-128 | 472.0 |
27 | TraesCS3B01G324300 | chr3D | 85.156 | 256 | 23 | 8 | 9147 | 9400 | 399377678 | 399377920 | 2.070000e-61 | 248.0 |
28 | TraesCS3B01G324300 | chr3D | 94.406 | 143 | 7 | 1 | 5913 | 6055 | 399373087 | 399373228 | 1.620000e-52 | 219.0 |
29 | TraesCS3B01G324300 | chr3D | 96.053 | 76 | 3 | 0 | 7466 | 7541 | 399375916 | 399375991 | 3.630000e-24 | 124.0 |
30 | TraesCS3B01G324300 | chr3D | 89.655 | 87 | 8 | 1 | 9239 | 9324 | 48851074 | 48850988 | 1.020000e-19 | 110.0 |
31 | TraesCS3B01G324300 | chr7A | 95.026 | 1367 | 55 | 8 | 3092 | 4451 | 47521046 | 47522406 | 0.000000e+00 | 2135.0 |
32 | TraesCS3B01G324300 | chr7A | 94.579 | 1365 | 64 | 7 | 3092 | 4451 | 683635995 | 683637354 | 0.000000e+00 | 2102.0 |
33 | TraesCS3B01G324300 | chr7A | 88.927 | 1472 | 113 | 25 | 1644 | 3094 | 683633711 | 683635153 | 0.000000e+00 | 1770.0 |
34 | TraesCS3B01G324300 | chr7A | 87.713 | 1172 | 96 | 18 | 1654 | 2781 | 47518495 | 47519662 | 0.000000e+00 | 1323.0 |
35 | TraesCS3B01G324300 | chr7A | 88.761 | 347 | 17 | 5 | 4709 | 5054 | 684252608 | 684252933 | 1.160000e-108 | 405.0 |
36 | TraesCS3B01G324300 | chr7A | 87.784 | 352 | 16 | 10 | 4709 | 5054 | 47522624 | 47522954 | 4.200000e-103 | 387.0 |
37 | TraesCS3B01G324300 | chr7A | 93.151 | 219 | 14 | 1 | 1016 | 1233 | 518809689 | 518809471 | 4.320000e-83 | 320.0 |
38 | TraesCS3B01G324300 | chr7A | 88.272 | 162 | 12 | 3 | 9402 | 9557 | 44448471 | 44448631 | 4.570000e-43 | 187.0 |
39 | TraesCS3B01G324300 | chr7A | 86.275 | 153 | 18 | 3 | 4737 | 4889 | 671144712 | 671144563 | 7.700000e-36 | 163.0 |
40 | TraesCS3B01G324300 | chr7A | 81.513 | 119 | 17 | 4 | 5744 | 5857 | 694438082 | 694438200 | 1.030000e-14 | 93.5 |
41 | TraesCS3B01G324300 | chr7A | 85.000 | 60 | 8 | 1 | 6738 | 6796 | 661947221 | 661947280 | 1.040000e-04 | 60.2 |
42 | TraesCS3B01G324300 | chr3A | 96.631 | 831 | 17 | 5 | 7918 | 8744 | 518633483 | 518634306 | 0.000000e+00 | 1369.0 |
43 | TraesCS3B01G324300 | chr3A | 93.341 | 901 | 27 | 11 | 764 | 1651 | 518629969 | 518630849 | 0.000000e+00 | 1301.0 |
44 | TraesCS3B01G324300 | chr3A | 89.706 | 952 | 66 | 12 | 6050 | 6996 | 518631655 | 518632579 | 0.000000e+00 | 1186.0 |
45 | TraesCS3B01G324300 | chr3A | 90.000 | 780 | 29 | 12 | 5307 | 6056 | 518630852 | 518631612 | 0.000000e+00 | 963.0 |
46 | TraesCS3B01G324300 | chr3A | 94.129 | 511 | 14 | 4 | 7433 | 7939 | 518632971 | 518633469 | 0.000000e+00 | 763.0 |
47 | TraesCS3B01G324300 | chr3A | 91.127 | 417 | 23 | 3 | 1 | 411 | 518627805 | 518628213 | 3.910000e-153 | 553.0 |
48 | TraesCS3B01G324300 | chr3A | 94.014 | 284 | 11 | 3 | 8706 | 8987 | 518634306 | 518634585 | 8.900000e-115 | 425.0 |
49 | TraesCS3B01G324300 | chr3A | 95.652 | 207 | 6 | 2 | 7187 | 7393 | 518632768 | 518632971 | 7.180000e-86 | 329.0 |
50 | TraesCS3B01G324300 | chr3A | 95.855 | 193 | 5 | 2 | 6992 | 7183 | 518632771 | 518632581 | 9.350000e-80 | 309.0 |
51 | TraesCS3B01G324300 | chr3A | 91.781 | 146 | 4 | 3 | 8978 | 9123 | 518634659 | 518634796 | 7.590000e-46 | 196.0 |
52 | TraesCS3B01G324300 | chr6A | 83.499 | 1109 | 97 | 26 | 1652 | 2709 | 11654244 | 11655317 | 0.000000e+00 | 955.0 |
53 | TraesCS3B01G324300 | chr6A | 93.583 | 187 | 8 | 3 | 5096 | 5282 | 11722753 | 11722935 | 9.480000e-70 | 276.0 |
54 | TraesCS3B01G324300 | chr6A | 92.513 | 187 | 10 | 3 | 5096 | 5282 | 11670758 | 11670940 | 2.050000e-66 | 265.0 |
55 | TraesCS3B01G324300 | chr6A | 93.333 | 75 | 4 | 1 | 9239 | 9312 | 64260789 | 64260715 | 1.020000e-19 | 110.0 |
56 | TraesCS3B01G324300 | chr2B | 91.837 | 294 | 21 | 3 | 428 | 720 | 549383286 | 549382995 | 3.220000e-109 | 407.0 |
57 | TraesCS3B01G324300 | chr2B | 91.228 | 285 | 23 | 2 | 439 | 721 | 649446833 | 649447117 | 4.200000e-103 | 387.0 |
58 | TraesCS3B01G324300 | chr2B | 90.588 | 85 | 7 | 1 | 9240 | 9323 | 754008534 | 754008450 | 2.830000e-20 | 111.0 |
59 | TraesCS3B01G324300 | chr2B | 93.151 | 73 | 4 | 1 | 9241 | 9312 | 139078909 | 139078981 | 1.320000e-18 | 106.0 |
60 | TraesCS3B01G324300 | chr5B | 91.901 | 284 | 22 | 1 | 439 | 721 | 338962584 | 338962301 | 6.980000e-106 | 396.0 |
61 | TraesCS3B01G324300 | chr5B | 91.901 | 284 | 22 | 1 | 439 | 721 | 338968088 | 338967805 | 6.980000e-106 | 396.0 |
62 | TraesCS3B01G324300 | chr5B | 85.714 | 133 | 19 | 0 | 9402 | 9534 | 625035730 | 625035862 | 3.610000e-29 | 141.0 |
63 | TraesCS3B01G324300 | chr5B | 85.714 | 133 | 19 | 0 | 9402 | 9534 | 628606456 | 628606588 | 3.610000e-29 | 141.0 |
64 | TraesCS3B01G324300 | chr5B | 78.313 | 166 | 31 | 5 | 6633 | 6796 | 110083960 | 110084122 | 1.700000e-17 | 102.0 |
65 | TraesCS3B01G324300 | chr5B | 85.227 | 88 | 13 | 0 | 6146 | 6233 | 77812351 | 77812264 | 3.690000e-14 | 91.6 |
66 | TraesCS3B01G324300 | chr6B | 91.489 | 282 | 23 | 1 | 439 | 719 | 65064684 | 65064965 | 4.200000e-103 | 387.0 |
67 | TraesCS3B01G324300 | chr6B | 89.865 | 296 | 28 | 2 | 435 | 728 | 664744215 | 664743920 | 7.030000e-101 | 379.0 |
68 | TraesCS3B01G324300 | chr6B | 76.179 | 424 | 79 | 11 | 6049 | 6460 | 279908839 | 279908426 | 4.540000e-48 | 204.0 |
69 | TraesCS3B01G324300 | chr6B | 88.991 | 109 | 11 | 1 | 5686 | 5794 | 130091742 | 130091849 | 6.040000e-27 | 134.0 |
70 | TraesCS3B01G324300 | chr6B | 90.698 | 86 | 7 | 1 | 9239 | 9323 | 512188589 | 512188504 | 7.870000e-21 | 113.0 |
71 | TraesCS3B01G324300 | chr5A | 98.387 | 186 | 2 | 1 | 9401 | 9586 | 522112189 | 522112005 | 9.280000e-85 | 326.0 |
72 | TraesCS3B01G324300 | chr5A | 90.826 | 218 | 19 | 1 | 1025 | 1242 | 383883151 | 383882935 | 3.390000e-74 | 291.0 |
73 | TraesCS3B01G324300 | chr5A | 100.000 | 28 | 0 | 0 | 5281 | 5308 | 30805632 | 30805605 | 1.700000e-02 | 52.8 |
74 | TraesCS3B01G324300 | chr7D | 93.151 | 219 | 14 | 1 | 1016 | 1233 | 477072292 | 477072510 | 4.320000e-83 | 320.0 |
75 | TraesCS3B01G324300 | chr7D | 80.972 | 247 | 39 | 7 | 6553 | 6796 | 87485488 | 87485729 | 1.270000e-43 | 189.0 |
76 | TraesCS3B01G324300 | chr4B | 97.838 | 185 | 3 | 1 | 9402 | 9586 | 618614002 | 618614185 | 1.550000e-82 | 318.0 |
77 | TraesCS3B01G324300 | chr4B | 89.062 | 64 | 7 | 0 | 5687 | 5750 | 70574968 | 70575031 | 7.980000e-11 | 80.5 |
78 | TraesCS3B01G324300 | chr1D | 90.455 | 220 | 21 | 0 | 1022 | 1241 | 470076698 | 470076479 | 3.390000e-74 | 291.0 |
79 | TraesCS3B01G324300 | chr1D | 84.574 | 188 | 25 | 4 | 6615 | 6800 | 246946780 | 246946595 | 5.910000e-42 | 183.0 |
80 | TraesCS3B01G324300 | chr1D | 91.262 | 103 | 9 | 0 | 5687 | 5789 | 211684178 | 211684076 | 3.610000e-29 | 141.0 |
81 | TraesCS3B01G324300 | chr1D | 92.593 | 81 | 5 | 1 | 9230 | 9309 | 320589937 | 320590017 | 2.190000e-21 | 115.0 |
82 | TraesCS3B01G324300 | chr1D | 87.097 | 93 | 10 | 2 | 9239 | 9329 | 319515748 | 319515840 | 4.740000e-18 | 104.0 |
83 | TraesCS3B01G324300 | chr1D | 81.720 | 93 | 10 | 5 | 6705 | 6794 | 441036588 | 441036676 | 4.800000e-08 | 71.3 |
84 | TraesCS3B01G324300 | chr1A | 90.654 | 214 | 20 | 0 | 1025 | 1238 | 563685860 | 563685647 | 1.580000e-72 | 285.0 |
85 | TraesCS3B01G324300 | chr1A | 92.308 | 52 | 4 | 0 | 5865 | 5916 | 302878684 | 302878633 | 3.710000e-09 | 75.0 |
86 | TraesCS3B01G324300 | chr5D | 83.019 | 159 | 21 | 6 | 5687 | 5843 | 546298256 | 546298102 | 1.300000e-28 | 139.0 |
87 | TraesCS3B01G324300 | chr5D | 87.912 | 91 | 8 | 3 | 9224 | 9312 | 338393673 | 338393584 | 4.740000e-18 | 104.0 |
88 | TraesCS3B01G324300 | chr5D | 86.364 | 88 | 12 | 0 | 6146 | 6233 | 271070031 | 271069944 | 7.920000e-16 | 97.1 |
89 | TraesCS3B01G324300 | chr5D | 86.047 | 86 | 12 | 0 | 6148 | 6233 | 20753418 | 20753333 | 1.030000e-14 | 93.5 |
90 | TraesCS3B01G324300 | chr5D | 91.304 | 69 | 5 | 1 | 6616 | 6684 | 197371207 | 197371274 | 1.030000e-14 | 93.5 |
91 | TraesCS3B01G324300 | chr6D | 86.916 | 107 | 13 | 1 | 5686 | 5792 | 58006037 | 58006142 | 1.690000e-22 | 119.0 |
92 | TraesCS3B01G324300 | chr6D | 88.119 | 101 | 9 | 3 | 5690 | 5787 | 416489536 | 416489436 | 6.080000e-22 | 117.0 |
93 | TraesCS3B01G324300 | chr6D | 77.381 | 168 | 29 | 9 | 6067 | 6230 | 31805407 | 31805569 | 3.690000e-14 | 91.6 |
94 | TraesCS3B01G324300 | chr6D | 84.211 | 95 | 14 | 1 | 6143 | 6236 | 409650963 | 409651057 | 3.690000e-14 | 91.6 |
95 | TraesCS3B01G324300 | chr6D | 96.296 | 54 | 2 | 0 | 5687 | 5740 | 415495570 | 415495517 | 1.330000e-13 | 89.8 |
96 | TraesCS3B01G324300 | chr4D | 85.714 | 84 | 12 | 0 | 6150 | 6233 | 503479828 | 503479745 | 1.330000e-13 | 89.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G324300 | chr3B | 525227190 | 525236775 | 9585 | False | 17703.000000 | 17703 | 100.000000 | 1 | 9586 | 1 | chr3B.!!$F4 | 9585 |
1 | TraesCS3B01G324300 | chr3B | 291298569 | 291302185 | 3616 | False | 6414.000000 | 6414 | 98.623000 | 1653 | 5282 | 1 | chr3B.!!$F3 | 3629 |
2 | TraesCS3B01G324300 | chr3B | 24912647 | 24916608 | 3961 | False | 3341.500000 | 4082 | 98.899500 | 1654 | 5280 | 2 | chr3B.!!$F6 | 3626 |
3 | TraesCS3B01G324300 | chr3B | 64546964 | 64547959 | 995 | False | 797.000000 | 797 | 81.766000 | 3708 | 4714 | 1 | chr3B.!!$F2 | 1006 |
4 | TraesCS3B01G324300 | chr4A | 735782653 | 735786277 | 3624 | False | 6525.000000 | 6525 | 99.146000 | 1654 | 5280 | 1 | chr4A.!!$F1 | 3626 |
5 | TraesCS3B01G324300 | chr4A | 630147767 | 630149248 | 1481 | True | 1790.000000 | 1790 | 88.964000 | 1654 | 3094 | 1 | chr4A.!!$R1 | 1440 |
6 | TraesCS3B01G324300 | chr1B | 636744571 | 636748198 | 3627 | False | 6523.000000 | 6523 | 99.118000 | 1654 | 5281 | 1 | chr1B.!!$F1 | 3627 |
7 | TraesCS3B01G324300 | chr7B | 254703656 | 254707301 | 3645 | True | 6493.000000 | 6493 | 98.821000 | 1644 | 5287 | 1 | chr7B.!!$R1 | 3643 |
8 | TraesCS3B01G324300 | chr7B | 91246112 | 91249740 | 3628 | False | 6457.000000 | 6457 | 98.788000 | 1653 | 5280 | 1 | chr7B.!!$F1 | 3627 |
9 | TraesCS3B01G324300 | chr2A | 605116274 | 605119879 | 3605 | False | 6357.000000 | 6357 | 98.401000 | 1656 | 5281 | 1 | chr2A.!!$F1 | 3625 |
10 | TraesCS3B01G324300 | chr3D | 399369853 | 399377920 | 8067 | False | 804.666667 | 2368 | 92.635444 | 1 | 9400 | 9 | chr3D.!!$F1 | 9399 |
11 | TraesCS3B01G324300 | chr7A | 683633711 | 683637354 | 3643 | False | 1936.000000 | 2102 | 91.753000 | 1644 | 4451 | 2 | chr7A.!!$F6 | 2807 |
12 | TraesCS3B01G324300 | chr7A | 47518495 | 47522954 | 4459 | False | 1281.666667 | 2135 | 90.174333 | 1654 | 5054 | 3 | chr7A.!!$F5 | 3400 |
13 | TraesCS3B01G324300 | chr3A | 518627805 | 518634796 | 6991 | False | 787.222222 | 1369 | 92.931222 | 1 | 9123 | 9 | chr3A.!!$F1 | 9122 |
14 | TraesCS3B01G324300 | chr6A | 11654244 | 11655317 | 1073 | False | 955.000000 | 955 | 83.499000 | 1652 | 2709 | 1 | chr6A.!!$F1 | 1057 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
954 | 2442 | 0.103937 | CCAGAGCCTAGCACTAGCAC | 59.896 | 60.000 | 0.00 | 0.0 | 45.49 | 4.40 | F |
955 | 2443 | 0.820226 | CAGAGCCTAGCACTAGCACA | 59.180 | 55.000 | 0.00 | 0.0 | 45.49 | 4.57 | F |
2386 | 3954 | 0.108424 | GATGCTCACCTTCGCTGTCT | 60.108 | 55.000 | 0.00 | 0.0 | 0.00 | 3.41 | F |
2973 | 4791 | 7.119846 | GTGCCATCTCCATACATTTTCCTATAC | 59.880 | 40.741 | 0.00 | 0.0 | 0.00 | 1.47 | F |
3799 | 7315 | 1.603456 | TGATGAACGAAAGCCTGCAA | 58.397 | 45.000 | 0.00 | 0.0 | 0.00 | 4.08 | F |
5612 | 9558 | 1.072806 | TGAATCACTGTGCTTCTGGCT | 59.927 | 47.619 | 20.91 | 0.0 | 42.39 | 4.75 | F |
6430 | 11745 | 0.037232 | CCTTCTTCTTCGGCGGTTCT | 60.037 | 55.000 | 7.21 | 0.0 | 0.00 | 3.01 | F |
6432 | 11747 | 0.037605 | TTCTTCTTCGGCGGTTCTCC | 60.038 | 55.000 | 7.21 | 0.0 | 0.00 | 3.71 | F |
6745 | 12399 | 0.250989 | CCGTTTTGGGGCCTTAGTGA | 60.251 | 55.000 | 0.84 | 0.0 | 0.00 | 3.41 | F |
7016 | 12671 | 0.615850 | AGGAAAGCCACTGCCTACTC | 59.384 | 55.000 | 0.00 | 0.0 | 38.69 | 2.59 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2386 | 3954 | 1.741401 | CGGCGAAGGTGAAGATGCA | 60.741 | 57.895 | 0.00 | 0.0 | 0.00 | 3.96 | R |
2894 | 4712 | 4.090057 | GCGCTCCTGTTTCCGCAC | 62.090 | 66.667 | 0.00 | 0.0 | 45.21 | 5.34 | R |
3290 | 6795 | 1.204941 | ACTCGATCTGTAGGTTGTGCC | 59.795 | 52.381 | 0.00 | 0.0 | 37.58 | 5.01 | R |
4826 | 8763 | 0.391661 | GCTCCAAGATGTCTTCCGCA | 60.392 | 55.000 | 0.00 | 0.0 | 33.11 | 5.69 | R |
5614 | 9560 | 0.033894 | ATGCCACCACATGATGCAGA | 60.034 | 50.000 | 0.00 | 0.0 | 35.10 | 4.26 | R |
6797 | 12452 | 0.174845 | TGCATCGTACTACAGGCCAC | 59.825 | 55.000 | 5.01 | 0.0 | 0.00 | 5.01 | R |
8099 | 14926 | 1.999648 | ACTGAGCAAAAAGGGATGCA | 58.000 | 45.000 | 0.00 | 0.0 | 44.95 | 3.96 | R |
8100 | 14927 | 4.725790 | ATAACTGAGCAAAAAGGGATGC | 57.274 | 40.909 | 0.00 | 0.0 | 42.87 | 3.91 | R |
8104 | 14931 | 6.698766 | GCAATCATATAACTGAGCAAAAAGGG | 59.301 | 38.462 | 0.00 | 0.0 | 0.00 | 3.95 | R |
8803 | 15673 | 2.135933 | CAGTTCTCCAACACGGTTCTC | 58.864 | 52.381 | 0.00 | 0.0 | 34.60 | 2.87 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
203 | 206 | 3.842923 | CGGCGTCAGGCAGGATCT | 61.843 | 66.667 | 0.00 | 0.00 | 46.16 | 2.75 |
220 | 223 | 4.661246 | TACCGCGCCGACCGTTTT | 62.661 | 61.111 | 0.00 | 0.00 | 39.71 | 2.43 |
234 | 237 | 2.104859 | GTTTTACGAGCCGAGCCCC | 61.105 | 63.158 | 1.50 | 0.00 | 0.00 | 5.80 |
235 | 238 | 2.288025 | TTTTACGAGCCGAGCCCCT | 61.288 | 57.895 | 1.50 | 0.00 | 0.00 | 4.79 |
414 | 424 | 7.301420 | TCTAGATTCAAGTATCACTGGGAGAT | 58.699 | 38.462 | 0.00 | 0.00 | 0.00 | 2.75 |
436 | 680 | 5.168647 | TGAAGGGAACGATAAAAAGGCTA | 57.831 | 39.130 | 0.00 | 0.00 | 0.00 | 3.93 |
437 | 681 | 4.939439 | TGAAGGGAACGATAAAAAGGCTAC | 59.061 | 41.667 | 0.00 | 0.00 | 0.00 | 3.58 |
439 | 683 | 3.196254 | AGGGAACGATAAAAAGGCTACGA | 59.804 | 43.478 | 0.00 | 0.00 | 0.00 | 3.43 |
441 | 685 | 3.554731 | GGAACGATAAAAAGGCTACGAGG | 59.445 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
444 | 688 | 2.864343 | CGATAAAAAGGCTACGAGGGTG | 59.136 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
447 | 691 | 2.651382 | AAAAGGCTACGAGGGTGTTT | 57.349 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
448 | 692 | 1.892209 | AAAGGCTACGAGGGTGTTTG | 58.108 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
450 | 694 | 0.763035 | AGGCTACGAGGGTGTTTGTT | 59.237 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
452 | 696 | 1.534163 | GGCTACGAGGGTGTTTGTTTC | 59.466 | 52.381 | 0.00 | 0.00 | 0.00 | 2.78 |
453 | 697 | 1.534163 | GCTACGAGGGTGTTTGTTTCC | 59.466 | 52.381 | 0.00 | 0.00 | 0.00 | 3.13 |
454 | 698 | 2.841215 | CTACGAGGGTGTTTGTTTCCA | 58.159 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
455 | 699 | 1.675552 | ACGAGGGTGTTTGTTTCCAG | 58.324 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
456 | 700 | 0.951558 | CGAGGGTGTTTGTTTCCAGG | 59.048 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
457 | 701 | 1.476110 | CGAGGGTGTTTGTTTCCAGGA | 60.476 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
458 | 702 | 2.661718 | GAGGGTGTTTGTTTCCAGGAA | 58.338 | 47.619 | 0.00 | 0.00 | 0.00 | 3.36 |
459 | 703 | 3.230976 | GAGGGTGTTTGTTTCCAGGAAT | 58.769 | 45.455 | 1.58 | 0.00 | 0.00 | 3.01 |
460 | 704 | 3.641436 | GAGGGTGTTTGTTTCCAGGAATT | 59.359 | 43.478 | 1.58 | 0.00 | 0.00 | 2.17 |
461 | 705 | 4.037222 | AGGGTGTTTGTTTCCAGGAATTT | 58.963 | 39.130 | 1.58 | 0.00 | 0.00 | 1.82 |
463 | 707 | 5.843969 | AGGGTGTTTGTTTCCAGGAATTTAT | 59.156 | 36.000 | 1.58 | 0.00 | 0.00 | 1.40 |
465 | 709 | 6.426633 | GGGTGTTTGTTTCCAGGAATTTATTG | 59.573 | 38.462 | 1.58 | 0.00 | 0.00 | 1.90 |
469 | 713 | 6.432403 | TTGTTTCCAGGAATTTATTGGCTT | 57.568 | 33.333 | 1.58 | 0.00 | 31.94 | 4.35 |
470 | 714 | 7.546250 | TTGTTTCCAGGAATTTATTGGCTTA | 57.454 | 32.000 | 1.58 | 0.00 | 31.94 | 3.09 |
471 | 715 | 7.546250 | TGTTTCCAGGAATTTATTGGCTTAA | 57.454 | 32.000 | 1.58 | 0.00 | 31.94 | 1.85 |
473 | 717 | 8.093927 | TGTTTCCAGGAATTTATTGGCTTAAAG | 58.906 | 33.333 | 1.58 | 0.00 | 31.94 | 1.85 |
474 | 718 | 8.311109 | GTTTCCAGGAATTTATTGGCTTAAAGA | 58.689 | 33.333 | 1.58 | 0.00 | 31.94 | 2.52 |
475 | 719 | 7.404671 | TCCAGGAATTTATTGGCTTAAAGAC | 57.595 | 36.000 | 0.00 | 0.00 | 31.94 | 3.01 |
476 | 720 | 7.182060 | TCCAGGAATTTATTGGCTTAAAGACT | 58.818 | 34.615 | 0.00 | 0.00 | 31.94 | 3.24 |
477 | 721 | 7.673926 | TCCAGGAATTTATTGGCTTAAAGACTT | 59.326 | 33.333 | 0.00 | 0.00 | 31.94 | 3.01 |
478 | 722 | 8.966868 | CCAGGAATTTATTGGCTTAAAGACTTA | 58.033 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
479 | 723 | 9.788960 | CAGGAATTTATTGGCTTAAAGACTTAC | 57.211 | 33.333 | 0.00 | 0.00 | 0.00 | 2.34 |
480 | 724 | 9.528489 | AGGAATTTATTGGCTTAAAGACTTACA | 57.472 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
512 | 1995 | 9.679661 | TTCTATAAGTGCCATCTAAATCAAACA | 57.320 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
513 | 1996 | 9.330063 | TCTATAAGTGCCATCTAAATCAAACAG | 57.670 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
515 | 1998 | 4.922206 | AGTGCCATCTAAATCAAACAGGA | 58.078 | 39.130 | 0.00 | 0.00 | 0.00 | 3.86 |
516 | 1999 | 4.946157 | AGTGCCATCTAAATCAAACAGGAG | 59.054 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
517 | 2000 | 4.943705 | GTGCCATCTAAATCAAACAGGAGA | 59.056 | 41.667 | 0.00 | 0.00 | 0.00 | 3.71 |
518 | 2001 | 5.065731 | GTGCCATCTAAATCAAACAGGAGAG | 59.934 | 44.000 | 0.00 | 0.00 | 0.00 | 3.20 |
520 | 2003 | 5.295540 | GCCATCTAAATCAAACAGGAGAGAC | 59.704 | 44.000 | 0.00 | 0.00 | 0.00 | 3.36 |
521 | 2004 | 6.648192 | CCATCTAAATCAAACAGGAGAGACT | 58.352 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
522 | 2005 | 7.108847 | CCATCTAAATCAAACAGGAGAGACTT | 58.891 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
523 | 2006 | 8.260818 | CCATCTAAATCAAACAGGAGAGACTTA | 58.739 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
527 | 2010 | 9.757227 | CTAAATCAAACAGGAGAGACTTATAGG | 57.243 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
528 | 2011 | 6.739331 | ATCAAACAGGAGAGACTTATAGGG | 57.261 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
530 | 2013 | 5.657302 | TCAAACAGGAGAGACTTATAGGGAC | 59.343 | 44.000 | 0.00 | 0.00 | 0.00 | 4.46 |
532 | 2015 | 5.475398 | ACAGGAGAGACTTATAGGGACTT | 57.525 | 43.478 | 0.00 | 0.00 | 41.75 | 3.01 |
533 | 2016 | 6.593759 | ACAGGAGAGACTTATAGGGACTTA | 57.406 | 41.667 | 0.00 | 0.00 | 41.75 | 2.24 |
534 | 2017 | 6.982899 | ACAGGAGAGACTTATAGGGACTTAA | 58.017 | 40.000 | 0.00 | 0.00 | 41.75 | 1.85 |
535 | 2018 | 7.420029 | ACAGGAGAGACTTATAGGGACTTAAA | 58.580 | 38.462 | 0.00 | 0.00 | 41.75 | 1.52 |
536 | 2019 | 7.562088 | ACAGGAGAGACTTATAGGGACTTAAAG | 59.438 | 40.741 | 0.00 | 0.00 | 41.75 | 1.85 |
539 | 2022 | 7.560626 | GGAGAGACTTATAGGGACTTAAAGTGA | 59.439 | 40.741 | 0.00 | 0.00 | 40.60 | 3.41 |
542 | 2025 | 6.668283 | AGACTTATAGGGACTTAAAGTGAGCA | 59.332 | 38.462 | 0.00 | 0.00 | 40.60 | 4.26 |
543 | 2026 | 7.345914 | AGACTTATAGGGACTTAAAGTGAGCAT | 59.654 | 37.037 | 0.00 | 0.00 | 40.60 | 3.79 |
545 | 2028 | 8.329502 | ACTTATAGGGACTTAAAGTGAGCATTT | 58.670 | 33.333 | 0.00 | 0.00 | 39.58 | 2.32 |
546 | 2029 | 8.506168 | TTATAGGGACTTAAAGTGAGCATTTG | 57.494 | 34.615 | 0.00 | 0.00 | 41.75 | 2.32 |
547 | 2030 | 4.082125 | AGGGACTTAAAGTGAGCATTTGG | 58.918 | 43.478 | 0.00 | 0.00 | 27.25 | 3.28 |
548 | 2031 | 3.193479 | GGGACTTAAAGTGAGCATTTGGG | 59.807 | 47.826 | 0.00 | 0.00 | 0.00 | 4.12 |
549 | 2032 | 4.079253 | GGACTTAAAGTGAGCATTTGGGA | 58.921 | 43.478 | 0.00 | 0.00 | 0.00 | 4.37 |
551 | 2034 | 5.185828 | GGACTTAAAGTGAGCATTTGGGATT | 59.814 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
552 | 2035 | 6.295292 | GGACTTAAAGTGAGCATTTGGGATTT | 60.295 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
553 | 2036 | 7.093945 | GGACTTAAAGTGAGCATTTGGGATTTA | 60.094 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
555 | 2038 | 8.253113 | ACTTAAAGTGAGCATTTGGGATTTATG | 58.747 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
556 | 2039 | 6.855763 | AAAGTGAGCATTTGGGATTTATGA | 57.144 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
557 | 2040 | 6.855763 | AAGTGAGCATTTGGGATTTATGAA | 57.144 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
560 | 2043 | 8.537728 | AGTGAGCATTTGGGATTTATGAAATA | 57.462 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
561 | 2044 | 8.980596 | AGTGAGCATTTGGGATTTATGAAATAA | 58.019 | 29.630 | 0.00 | 0.00 | 36.92 | 1.40 |
562 | 2045 | 9.252962 | GTGAGCATTTGGGATTTATGAAATAAG | 57.747 | 33.333 | 0.00 | 0.00 | 40.40 | 1.73 |
563 | 2046 | 9.199645 | TGAGCATTTGGGATTTATGAAATAAGA | 57.800 | 29.630 | 0.00 | 0.00 | 40.40 | 2.10 |
564 | 2047 | 9.468532 | GAGCATTTGGGATTTATGAAATAAGAC | 57.531 | 33.333 | 0.00 | 0.00 | 40.40 | 3.01 |
565 | 2048 | 9.205513 | AGCATTTGGGATTTATGAAATAAGACT | 57.794 | 29.630 | 0.00 | 0.00 | 40.40 | 3.24 |
566 | 2049 | 9.468532 | GCATTTGGGATTTATGAAATAAGACTC | 57.531 | 33.333 | 0.00 | 0.00 | 40.40 | 3.36 |
570 | 2053 | 9.973661 | TTGGGATTTATGAAATAAGACTCTCAA | 57.026 | 29.630 | 0.00 | 0.00 | 40.40 | 3.02 |
571 | 2054 | 9.618890 | TGGGATTTATGAAATAAGACTCTCAAG | 57.381 | 33.333 | 0.00 | 0.00 | 40.40 | 3.02 |
572 | 2055 | 9.620259 | GGGATTTATGAAATAAGACTCTCAAGT | 57.380 | 33.333 | 0.00 | 0.00 | 40.40 | 3.16 |
578 | 2061 | 7.171630 | TGAAATAAGACTCTCAAGTAGGGAC | 57.828 | 40.000 | 0.00 | 0.00 | 35.28 | 4.46 |
584 | 2067 | 9.802039 | ATAAGACTCTCAAGTAGGGACTTATAG | 57.198 | 37.037 | 7.53 | 0.00 | 45.75 | 1.31 |
585 | 2068 | 6.607019 | AGACTCTCAAGTAGGGACTTATAGG | 58.393 | 44.000 | 0.00 | 0.00 | 44.39 | 2.57 |
587 | 2070 | 5.435707 | ACTCTCAAGTAGGGACTTATAGGGA | 59.564 | 44.000 | 6.35 | 0.00 | 44.39 | 4.20 |
588 | 2071 | 5.703310 | TCTCAAGTAGGGACTTATAGGGAC | 58.297 | 45.833 | 0.00 | 0.00 | 44.39 | 4.46 |
594 | 2077 | 9.245481 | CAAGTAGGGACTTATAGGGACTTATAG | 57.755 | 40.741 | 0.00 | 0.00 | 44.39 | 1.31 |
597 | 2080 | 9.022884 | GTAGGGACTTATAGGGACTTATAGTTG | 57.977 | 40.741 | 0.00 | 0.00 | 39.49 | 3.16 |
598 | 2081 | 7.602868 | AGGGACTTATAGGGACTTATAGTTGT | 58.397 | 38.462 | 0.00 | 0.00 | 34.75 | 3.32 |
599 | 2082 | 8.740512 | AGGGACTTATAGGGACTTATAGTTGTA | 58.259 | 37.037 | 0.00 | 0.00 | 34.75 | 2.41 |
609 | 2092 | 9.448587 | AGGGACTTATAGTTGTAATATGGTCTT | 57.551 | 33.333 | 0.00 | 0.00 | 27.25 | 3.01 |
629 | 2112 | 9.496710 | TGGTCTTATAGGGACTTATAAGTTTCA | 57.503 | 33.333 | 18.96 | 6.17 | 39.88 | 2.69 |
630 | 2113 | 9.984190 | GGTCTTATAGGGACTTATAAGTTTCAG | 57.016 | 37.037 | 18.96 | 8.87 | 39.88 | 3.02 |
631 | 2114 | 9.984190 | GTCTTATAGGGACTTATAAGTTTCAGG | 57.016 | 37.037 | 18.96 | 6.13 | 39.88 | 3.86 |
632 | 2115 | 9.947189 | TCTTATAGGGACTTATAAGTTTCAGGA | 57.053 | 33.333 | 18.96 | 8.02 | 39.88 | 3.86 |
635 | 2118 | 6.063496 | AGGGACTTATAAGTTTCAGGAACC | 57.937 | 41.667 | 18.96 | 12.26 | 39.88 | 3.62 |
636 | 2119 | 5.550403 | AGGGACTTATAAGTTTCAGGAACCA | 59.450 | 40.000 | 18.96 | 0.00 | 39.88 | 3.67 |
637 | 2120 | 6.045106 | AGGGACTTATAAGTTTCAGGAACCAA | 59.955 | 38.462 | 18.96 | 0.00 | 39.88 | 3.67 |
639 | 2122 | 7.309012 | GGGACTTATAAGTTTCAGGAACCAAAC | 60.309 | 40.741 | 18.96 | 1.70 | 39.88 | 2.93 |
640 | 2123 | 7.229907 | GGACTTATAAGTTTCAGGAACCAAACA | 59.770 | 37.037 | 18.96 | 0.00 | 39.88 | 2.83 |
641 | 2124 | 8.528044 | ACTTATAAGTTTCAGGAACCAAACAA | 57.472 | 30.769 | 12.50 | 0.00 | 39.13 | 2.83 |
642 | 2125 | 8.630037 | ACTTATAAGTTTCAGGAACCAAACAAG | 58.370 | 33.333 | 12.50 | 6.42 | 39.13 | 3.16 |
643 | 2126 | 8.528044 | TTATAAGTTTCAGGAACCAAACAAGT | 57.472 | 30.769 | 8.68 | 0.00 | 39.13 | 3.16 |
646 | 2129 | 4.887655 | AGTTTCAGGAACCAAACAAGTAGG | 59.112 | 41.667 | 8.68 | 0.00 | 39.13 | 3.18 |
647 | 2130 | 3.502123 | TCAGGAACCAAACAAGTAGGG | 57.498 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
649 | 2132 | 3.146847 | CAGGAACCAAACAAGTAGGGAC | 58.853 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
653 | 2136 | 4.647853 | GGAACCAAACAAGTAGGGACTTTT | 59.352 | 41.667 | 0.00 | 0.00 | 43.70 | 2.27 |
656 | 2139 | 5.382616 | ACCAAACAAGTAGGGACTTTTAGG | 58.617 | 41.667 | 0.00 | 0.00 | 43.70 | 2.69 |
657 | 2140 | 4.765339 | CCAAACAAGTAGGGACTTTTAGGG | 59.235 | 45.833 | 0.00 | 0.00 | 43.70 | 3.53 |
658 | 2141 | 5.457052 | CCAAACAAGTAGGGACTTTTAGGGA | 60.457 | 44.000 | 0.00 | 0.00 | 43.70 | 4.20 |
659 | 2142 | 4.904895 | ACAAGTAGGGACTTTTAGGGAC | 57.095 | 45.455 | 0.00 | 0.00 | 43.70 | 4.46 |
660 | 2143 | 4.500452 | ACAAGTAGGGACTTTTAGGGACT | 58.500 | 43.478 | 0.00 | 0.00 | 43.70 | 3.85 |
661 | 2144 | 4.912133 | ACAAGTAGGGACTTTTAGGGACTT | 59.088 | 41.667 | 0.00 | 0.00 | 43.70 | 3.01 |
662 | 2145 | 5.221864 | ACAAGTAGGGACTTTTAGGGACTTG | 60.222 | 44.000 | 9.29 | 9.29 | 43.70 | 3.16 |
663 | 2146 | 3.844804 | AGTAGGGACTTTTAGGGACTTGG | 59.155 | 47.826 | 0.00 | 0.00 | 39.49 | 3.61 |
664 | 2147 | 1.993301 | AGGGACTTTTAGGGACTTGGG | 59.007 | 52.381 | 0.00 | 0.00 | 34.75 | 4.12 |
665 | 2148 | 1.990327 | GGGACTTTTAGGGACTTGGGA | 59.010 | 52.381 | 0.00 | 0.00 | 41.75 | 4.37 |
666 | 2149 | 2.290768 | GGGACTTTTAGGGACTTGGGAC | 60.291 | 54.545 | 0.00 | 0.00 | 41.75 | 4.46 |
668 | 2151 | 3.074094 | GGACTTTTAGGGACTTGGGACTT | 59.926 | 47.826 | 0.00 | 0.00 | 41.75 | 3.01 |
669 | 2152 | 4.287845 | GGACTTTTAGGGACTTGGGACTTA | 59.712 | 45.833 | 0.00 | 0.00 | 41.75 | 2.24 |
671 | 2154 | 6.157471 | GGACTTTTAGGGACTTGGGACTTATA | 59.843 | 42.308 | 0.00 | 0.00 | 41.75 | 0.98 |
673 | 2156 | 7.992295 | ACTTTTAGGGACTTGGGACTTATAAA | 58.008 | 34.615 | 0.00 | 0.00 | 41.75 | 1.40 |
675 | 2158 | 9.475620 | CTTTTAGGGACTTGGGACTTATAAATT | 57.524 | 33.333 | 0.00 | 0.00 | 41.75 | 1.82 |
676 | 2159 | 8.817092 | TTTAGGGACTTGGGACTTATAAATTG | 57.183 | 34.615 | 0.00 | 0.00 | 41.75 | 2.32 |
677 | 2160 | 5.766590 | AGGGACTTGGGACTTATAAATTGG | 58.233 | 41.667 | 0.00 | 0.00 | 27.25 | 3.16 |
680 | 2163 | 5.593095 | GGACTTGGGACTTATAAATTGGGAC | 59.407 | 44.000 | 0.00 | 0.00 | 0.00 | 4.46 |
681 | 2164 | 6.402981 | ACTTGGGACTTATAAATTGGGACT | 57.597 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
682 | 2165 | 7.366191 | GGACTTGGGACTTATAAATTGGGACTA | 60.366 | 40.741 | 0.00 | 0.00 | 0.00 | 2.59 |
684 | 2167 | 8.395605 | ACTTGGGACTTATAAATTGGGACTAAA | 58.604 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
686 | 2169 | 9.603189 | TTGGGACTTATAAATTGGGACTAAAAA | 57.397 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
715 | 2198 | 9.244799 | GTTCTAAAACTTATGAACCAAACAAGG | 57.755 | 33.333 | 0.00 | 0.00 | 34.47 | 3.61 |
716 | 2199 | 7.430441 | TCTAAAACTTATGAACCAAACAAGGC | 58.570 | 34.615 | 0.00 | 0.00 | 0.00 | 4.35 |
717 | 2200 | 4.600692 | AACTTATGAACCAAACAAGGCC | 57.399 | 40.909 | 0.00 | 0.00 | 0.00 | 5.19 |
718 | 2201 | 3.844640 | ACTTATGAACCAAACAAGGCCT | 58.155 | 40.909 | 0.00 | 0.00 | 0.00 | 5.19 |
719 | 2202 | 4.993028 | ACTTATGAACCAAACAAGGCCTA | 58.007 | 39.130 | 5.16 | 0.00 | 0.00 | 3.93 |
720 | 2203 | 5.580022 | ACTTATGAACCAAACAAGGCCTAT | 58.420 | 37.500 | 5.16 | 0.00 | 0.00 | 2.57 |
721 | 2204 | 5.418840 | ACTTATGAACCAAACAAGGCCTATG | 59.581 | 40.000 | 5.16 | 9.65 | 0.00 | 2.23 |
722 | 2205 | 3.237268 | TGAACCAAACAAGGCCTATGT | 57.763 | 42.857 | 5.16 | 10.38 | 0.00 | 2.29 |
723 | 2206 | 4.374689 | TGAACCAAACAAGGCCTATGTA | 57.625 | 40.909 | 5.16 | 0.00 | 0.00 | 2.29 |
724 | 2207 | 4.076394 | TGAACCAAACAAGGCCTATGTAC | 58.924 | 43.478 | 5.16 | 2.95 | 0.00 | 2.90 |
725 | 2208 | 4.202524 | TGAACCAAACAAGGCCTATGTACT | 60.203 | 41.667 | 5.16 | 1.50 | 0.00 | 2.73 |
726 | 2209 | 3.686016 | ACCAAACAAGGCCTATGTACTG | 58.314 | 45.455 | 5.16 | 12.92 | 0.00 | 2.74 |
727 | 2210 | 3.073946 | ACCAAACAAGGCCTATGTACTGT | 59.926 | 43.478 | 5.16 | 1.70 | 0.00 | 3.55 |
728 | 2211 | 4.287585 | ACCAAACAAGGCCTATGTACTGTA | 59.712 | 41.667 | 5.16 | 0.00 | 0.00 | 2.74 |
729 | 2212 | 5.045140 | ACCAAACAAGGCCTATGTACTGTAT | 60.045 | 40.000 | 5.16 | 2.91 | 0.00 | 2.29 |
730 | 2213 | 6.157297 | ACCAAACAAGGCCTATGTACTGTATA | 59.843 | 38.462 | 5.16 | 0.00 | 0.00 | 1.47 |
731 | 2214 | 7.147373 | ACCAAACAAGGCCTATGTACTGTATAT | 60.147 | 37.037 | 5.16 | 2.60 | 0.00 | 0.86 |
732 | 2215 | 7.173218 | CCAAACAAGGCCTATGTACTGTATATG | 59.827 | 40.741 | 5.16 | 6.09 | 0.00 | 1.78 |
733 | 2216 | 6.996180 | ACAAGGCCTATGTACTGTATATGT | 57.004 | 37.500 | 5.16 | 0.00 | 0.00 | 2.29 |
734 | 2217 | 8.486942 | AACAAGGCCTATGTACTGTATATGTA | 57.513 | 34.615 | 5.16 | 0.00 | 0.00 | 2.29 |
735 | 2218 | 8.123639 | ACAAGGCCTATGTACTGTATATGTAG | 57.876 | 38.462 | 5.16 | 0.00 | 0.00 | 2.74 |
736 | 2219 | 7.728981 | ACAAGGCCTATGTACTGTATATGTAGT | 59.271 | 37.037 | 5.16 | 0.00 | 0.00 | 2.73 |
737 | 2220 | 9.239551 | CAAGGCCTATGTACTGTATATGTAGTA | 57.760 | 37.037 | 5.16 | 0.00 | 0.00 | 1.82 |
738 | 2221 | 9.463902 | AAGGCCTATGTACTGTATATGTAGTAG | 57.536 | 37.037 | 5.16 | 0.00 | 30.59 | 2.57 |
739 | 2222 | 7.556996 | AGGCCTATGTACTGTATATGTAGTAGC | 59.443 | 40.741 | 1.29 | 2.08 | 30.59 | 3.58 |
740 | 2223 | 7.201803 | GGCCTATGTACTGTATATGTAGTAGCC | 60.202 | 44.444 | 7.25 | 10.13 | 30.59 | 3.93 |
741 | 2224 | 7.338703 | GCCTATGTACTGTATATGTAGTAGCCA | 59.661 | 40.741 | 7.25 | 0.10 | 30.59 | 4.75 |
742 | 2225 | 8.675504 | CCTATGTACTGTATATGTAGTAGCCAC | 58.324 | 40.741 | 7.25 | 0.00 | 30.59 | 5.01 |
743 | 2226 | 9.451002 | CTATGTACTGTATATGTAGTAGCCACT | 57.549 | 37.037 | 7.25 | 0.00 | 38.91 | 4.00 |
745 | 2228 | 9.803507 | ATGTACTGTATATGTAGTAGCCACTAA | 57.196 | 33.333 | 0.00 | 0.00 | 38.98 | 2.24 |
746 | 2229 | 9.631257 | TGTACTGTATATGTAGTAGCCACTAAA | 57.369 | 33.333 | 0.00 | 0.00 | 38.98 | 1.85 |
810 | 2293 | 2.249309 | CACAAGAACAGCGCACCG | 59.751 | 61.111 | 11.47 | 0.00 | 0.00 | 4.94 |
816 | 2299 | 1.359848 | AGAACAGCGCACCGAATAAG | 58.640 | 50.000 | 11.47 | 0.00 | 0.00 | 1.73 |
954 | 2442 | 0.103937 | CCAGAGCCTAGCACTAGCAC | 59.896 | 60.000 | 0.00 | 0.00 | 45.49 | 4.40 |
955 | 2443 | 0.820226 | CAGAGCCTAGCACTAGCACA | 59.180 | 55.000 | 0.00 | 0.00 | 45.49 | 4.57 |
1283 | 2771 | 9.276590 | GTCTCTTAATTACTACTCCTACCTCTC | 57.723 | 40.741 | 0.00 | 0.00 | 0.00 | 3.20 |
1381 | 2881 | 2.924421 | CTTCTTAGGAACCAGGATGCC | 58.076 | 52.381 | 0.00 | 0.00 | 31.97 | 4.40 |
1411 | 2911 | 4.500887 | CCTTGGCCATTCATTTGCTCTATG | 60.501 | 45.833 | 6.09 | 0.00 | 0.00 | 2.23 |
1468 | 2968 | 2.798283 | CTGCATTTTTGTTGCCAGTCTG | 59.202 | 45.455 | 0.00 | 0.00 | 39.39 | 3.51 |
1483 | 2983 | 2.755655 | CAGTCTGGACGATCTTGGTAGT | 59.244 | 50.000 | 0.00 | 0.00 | 36.20 | 2.73 |
1636 | 3137 | 1.271108 | TGTGATTTAGCGCTTGGGACA | 60.271 | 47.619 | 18.68 | 10.07 | 0.00 | 4.02 |
2386 | 3954 | 0.108424 | GATGCTCACCTTCGCTGTCT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2973 | 4791 | 7.119846 | GTGCCATCTCCATACATTTTCCTATAC | 59.880 | 40.741 | 0.00 | 0.00 | 0.00 | 1.47 |
3290 | 6795 | 7.461107 | CAGCAAAATTTCTATTTCATTGCCAG | 58.539 | 34.615 | 0.00 | 0.00 | 36.40 | 4.85 |
3799 | 7315 | 1.603456 | TGATGAACGAAAGCCTGCAA | 58.397 | 45.000 | 0.00 | 0.00 | 0.00 | 4.08 |
3820 | 7336 | 8.140677 | TGCAAAAATGGTCAAATTCTGTAAAG | 57.859 | 30.769 | 0.00 | 0.00 | 0.00 | 1.85 |
4084 | 7953 | 2.222678 | CGATTTCAGAATCCGCTCCATG | 59.777 | 50.000 | 0.00 | 0.00 | 38.76 | 3.66 |
4308 | 8183 | 4.219033 | CAACGATTGCTTGTCCAAAGTAC | 58.781 | 43.478 | 0.00 | 0.00 | 0.00 | 2.73 |
5354 | 9292 | 5.750067 | AGCAGTTGAAATCATTGTTGTGAAC | 59.250 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
5355 | 9293 | 5.750067 | GCAGTTGAAATCATTGTTGTGAACT | 59.250 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5356 | 9294 | 6.917477 | GCAGTTGAAATCATTGTTGTGAACTA | 59.083 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
5357 | 9295 | 7.096477 | GCAGTTGAAATCATTGTTGTGAACTAC | 60.096 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
5358 | 9296 | 8.131100 | CAGTTGAAATCATTGTTGTGAACTACT | 58.869 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
5359 | 9297 | 9.337396 | AGTTGAAATCATTGTTGTGAACTACTA | 57.663 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
5366 | 9304 | 8.173542 | TCATTGTTGTGAACTACTACTAGTGA | 57.826 | 34.615 | 5.39 | 0.00 | 36.24 | 3.41 |
5548 | 9486 | 3.434309 | CTTGGGGATGAAATGACCACTT | 58.566 | 45.455 | 0.00 | 0.00 | 29.47 | 3.16 |
5610 | 9556 | 3.754850 | TCATTGAATCACTGTGCTTCTGG | 59.245 | 43.478 | 20.91 | 12.43 | 0.00 | 3.86 |
5611 | 9557 | 1.527034 | TGAATCACTGTGCTTCTGGC | 58.473 | 50.000 | 20.91 | 1.05 | 42.22 | 4.85 |
5612 | 9558 | 1.072806 | TGAATCACTGTGCTTCTGGCT | 59.927 | 47.619 | 20.91 | 0.00 | 42.39 | 4.75 |
5613 | 9559 | 2.157738 | GAATCACTGTGCTTCTGGCTT | 58.842 | 47.619 | 15.13 | 0.00 | 42.39 | 4.35 |
5614 | 9560 | 2.283145 | ATCACTGTGCTTCTGGCTTT | 57.717 | 45.000 | 2.12 | 0.00 | 42.39 | 3.51 |
5615 | 9561 | 1.597742 | TCACTGTGCTTCTGGCTTTC | 58.402 | 50.000 | 2.12 | 0.00 | 42.39 | 2.62 |
5616 | 9562 | 1.141657 | TCACTGTGCTTCTGGCTTTCT | 59.858 | 47.619 | 2.12 | 0.00 | 42.39 | 2.52 |
5617 | 9563 | 1.266175 | CACTGTGCTTCTGGCTTTCTG | 59.734 | 52.381 | 0.00 | 0.00 | 42.39 | 3.02 |
5765 | 9721 | 1.857837 | CATCACCAAAAACGTGCAACC | 59.142 | 47.619 | 0.00 | 0.00 | 0.00 | 3.77 |
5766 | 9722 | 0.179161 | TCACCAAAAACGTGCAACCG | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
5794 | 9750 | 3.660970 | TGATGTAAAATAGGGCAGCCA | 57.339 | 42.857 | 15.19 | 0.00 | 0.00 | 4.75 |
5799 | 9755 | 2.813226 | AAAATAGGGCAGCCACGCGA | 62.813 | 55.000 | 15.93 | 0.00 | 0.00 | 5.87 |
5845 | 9822 | 0.679002 | ATAGGCCAGCAGCACAACAG | 60.679 | 55.000 | 5.01 | 0.00 | 46.50 | 3.16 |
5846 | 9823 | 4.353437 | GGCCAGCAGCACAACAGC | 62.353 | 66.667 | 0.00 | 0.00 | 46.50 | 4.40 |
5847 | 9824 | 3.598715 | GCCAGCAGCACAACAGCA | 61.599 | 61.111 | 0.00 | 0.00 | 42.97 | 4.41 |
5848 | 9825 | 2.643272 | CCAGCAGCACAACAGCAG | 59.357 | 61.111 | 0.00 | 0.00 | 36.85 | 4.24 |
5849 | 9826 | 2.050351 | CAGCAGCACAACAGCAGC | 60.050 | 61.111 | 0.00 | 0.00 | 45.99 | 5.25 |
5851 | 9828 | 2.354305 | GCAGCACAACAGCAGCAC | 60.354 | 61.111 | 0.00 | 0.00 | 45.12 | 4.40 |
5852 | 9829 | 3.112842 | CAGCACAACAGCAGCACA | 58.887 | 55.556 | 0.00 | 0.00 | 36.85 | 4.57 |
5853 | 9830 | 1.008881 | CAGCACAACAGCAGCACAG | 60.009 | 57.895 | 0.00 | 0.00 | 36.85 | 3.66 |
5854 | 9831 | 2.354305 | GCACAACAGCAGCACAGC | 60.354 | 61.111 | 0.00 | 0.00 | 0.00 | 4.40 |
5855 | 9832 | 3.112842 | CACAACAGCAGCACAGCA | 58.887 | 55.556 | 0.00 | 0.00 | 36.85 | 4.41 |
5863 | 9840 | 1.790623 | CAGCAGCACAGCAATTTCAAC | 59.209 | 47.619 | 0.00 | 0.00 | 36.85 | 3.18 |
5993 | 11254 | 1.740025 | GGTTCTTCCCTTCGCATTCTG | 59.260 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
6097 | 11407 | 4.566004 | AGACTACAAATGCACATACACGT | 58.434 | 39.130 | 0.00 | 0.00 | 0.00 | 4.49 |
6128 | 11438 | 7.879677 | TCACATCCTATTCATATGAACATGACC | 59.120 | 37.037 | 20.19 | 0.00 | 36.80 | 4.02 |
6257 | 11571 | 2.191641 | GGTGATCAGGGAGCAGGC | 59.808 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
6300 | 11614 | 3.648982 | CGAGCAACGGCAGCAACA | 61.649 | 61.111 | 0.00 | 0.00 | 44.61 | 3.33 |
6346 | 11661 | 0.254747 | TTCATCTTTTCGGCCGGGAT | 59.745 | 50.000 | 27.83 | 19.57 | 0.00 | 3.85 |
6354 | 11669 | 4.473520 | CGGCCGGGATGAAGCTGT | 62.474 | 66.667 | 20.10 | 0.00 | 0.00 | 4.40 |
6356 | 11671 | 2.268920 | GCCGGGATGAAGCTGTGA | 59.731 | 61.111 | 2.18 | 0.00 | 0.00 | 3.58 |
6421 | 11736 | 2.744768 | CGCGGCAGCCTTCTTCTTC | 61.745 | 63.158 | 10.54 | 0.00 | 41.18 | 2.87 |
6422 | 11737 | 2.744768 | GCGGCAGCCTTCTTCTTCG | 61.745 | 63.158 | 10.54 | 0.00 | 37.42 | 3.79 |
6423 | 11738 | 2.103042 | CGGCAGCCTTCTTCTTCGG | 61.103 | 63.158 | 10.54 | 0.00 | 0.00 | 4.30 |
6424 | 11739 | 2.402572 | GGCAGCCTTCTTCTTCGGC | 61.403 | 63.158 | 3.29 | 0.00 | 44.09 | 5.54 |
6427 | 11742 | 2.047179 | GCCTTCTTCTTCGGCGGT | 60.047 | 61.111 | 7.21 | 0.00 | 33.64 | 5.68 |
6428 | 11743 | 1.671379 | GCCTTCTTCTTCGGCGGTT | 60.671 | 57.895 | 7.21 | 0.00 | 33.64 | 4.44 |
6429 | 11744 | 1.636570 | GCCTTCTTCTTCGGCGGTTC | 61.637 | 60.000 | 7.21 | 0.00 | 33.64 | 3.62 |
6430 | 11745 | 0.037232 | CCTTCTTCTTCGGCGGTTCT | 60.037 | 55.000 | 7.21 | 0.00 | 0.00 | 3.01 |
6431 | 11746 | 1.351153 | CTTCTTCTTCGGCGGTTCTC | 58.649 | 55.000 | 7.21 | 0.00 | 0.00 | 2.87 |
6432 | 11747 | 0.037605 | TTCTTCTTCGGCGGTTCTCC | 60.038 | 55.000 | 7.21 | 0.00 | 0.00 | 3.71 |
6433 | 11748 | 1.448013 | CTTCTTCGGCGGTTCTCCC | 60.448 | 63.158 | 7.21 | 0.00 | 0.00 | 4.30 |
6434 | 11749 | 2.167398 | CTTCTTCGGCGGTTCTCCCA | 62.167 | 60.000 | 7.21 | 0.00 | 0.00 | 4.37 |
6435 | 11750 | 1.550130 | TTCTTCGGCGGTTCTCCCAT | 61.550 | 55.000 | 7.21 | 0.00 | 0.00 | 4.00 |
6436 | 11751 | 1.078426 | CTTCGGCGGTTCTCCCATT | 60.078 | 57.895 | 7.21 | 0.00 | 0.00 | 3.16 |
6437 | 11752 | 1.078708 | TTCGGCGGTTCTCCCATTC | 60.079 | 57.895 | 7.21 | 0.00 | 0.00 | 2.67 |
6511 | 12165 | 4.385405 | GGAGCAGCAGTGTCGGCT | 62.385 | 66.667 | 10.78 | 10.78 | 43.77 | 5.52 |
6583 | 12237 | 2.668550 | GGCGGGAAGTTTCAGCGT | 60.669 | 61.111 | 0.00 | 0.00 | 34.60 | 5.07 |
6627 | 12281 | 0.663153 | CCGCTATGTTTTGCTAGGGC | 59.337 | 55.000 | 0.00 | 0.00 | 39.26 | 5.19 |
6631 | 12285 | 1.092921 | TATGTTTTGCTAGGGCGCGG | 61.093 | 55.000 | 8.83 | 0.00 | 42.25 | 6.46 |
6685 | 12339 | 6.490040 | GCCCTATTTTACATCTGGAGCAAATA | 59.510 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
6692 | 12346 | 3.776969 | ACATCTGGAGCAAATAGTGAGGA | 59.223 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
6693 | 12347 | 4.225942 | ACATCTGGAGCAAATAGTGAGGAA | 59.774 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
6694 | 12348 | 4.908601 | TCTGGAGCAAATAGTGAGGAAA | 57.091 | 40.909 | 0.00 | 0.00 | 0.00 | 3.13 |
6695 | 12349 | 5.241403 | TCTGGAGCAAATAGTGAGGAAAA | 57.759 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
6696 | 12350 | 5.630121 | TCTGGAGCAAATAGTGAGGAAAAA | 58.370 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
6733 | 12387 | 1.021202 | TCTGTTGGAGCACCGTTTTG | 58.979 | 50.000 | 0.00 | 0.00 | 39.42 | 2.44 |
6745 | 12399 | 0.250989 | CCGTTTTGGGGCCTTAGTGA | 60.251 | 55.000 | 0.84 | 0.00 | 0.00 | 3.41 |
6836 | 12491 | 6.519679 | TGCAAATGATTTTGATCAGCTAGT | 57.480 | 33.333 | 0.00 | 0.00 | 44.11 | 2.57 |
6893 | 12548 | 3.686726 | GTCCACTTTAGAGGAGCAACATG | 59.313 | 47.826 | 0.00 | 0.00 | 35.49 | 3.21 |
6896 | 12551 | 4.154918 | CCACTTTAGAGGAGCAACATGTTC | 59.845 | 45.833 | 8.48 | 4.08 | 0.00 | 3.18 |
6908 | 12563 | 4.081198 | AGCAACATGTTCTTTTTGGAACCA | 60.081 | 37.500 | 8.48 | 0.00 | 43.31 | 3.67 |
6985 | 12640 | 2.475685 | GCAGAAAATACGGAGCGGTTTC | 60.476 | 50.000 | 0.00 | 0.00 | 31.45 | 2.78 |
7016 | 12671 | 0.615850 | AGGAAAGCCACTGCCTACTC | 59.384 | 55.000 | 0.00 | 0.00 | 38.69 | 2.59 |
7017 | 12672 | 0.615850 | GGAAAGCCACTGCCTACTCT | 59.384 | 55.000 | 0.00 | 0.00 | 38.69 | 3.24 |
7018 | 12673 | 1.406205 | GGAAAGCCACTGCCTACTCTC | 60.406 | 57.143 | 0.00 | 0.00 | 38.69 | 3.20 |
7019 | 12674 | 1.552792 | GAAAGCCACTGCCTACTCTCT | 59.447 | 52.381 | 0.00 | 0.00 | 38.69 | 3.10 |
7106 | 12761 | 5.874810 | AGCGCTAACAGTCTTGATTTGATAA | 59.125 | 36.000 | 8.99 | 0.00 | 0.00 | 1.75 |
7183 | 12838 | 5.337813 | GGTTCATCAAGGGAATTCTTGCATT | 60.338 | 40.000 | 5.23 | 0.00 | 42.68 | 3.56 |
7185 | 12840 | 7.322664 | GTTCATCAAGGGAATTCTTGCATTAA | 58.677 | 34.615 | 5.23 | 0.00 | 42.68 | 1.40 |
7189 | 12844 | 7.104043 | TCAAGGGAATTCTTGCATTAATGAG | 57.896 | 36.000 | 19.73 | 8.59 | 42.68 | 2.90 |
7196 | 12851 | 6.939132 | ATTCTTGCATTAATGAGAGGACAG | 57.061 | 37.500 | 19.73 | 3.68 | 0.00 | 3.51 |
7226 | 12881 | 3.799420 | GCTATGTGATTCCTGTTCGAGAC | 59.201 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
7377 | 13032 | 9.064706 | ACAATCATCCAATGCAAAATACAAAAA | 57.935 | 25.926 | 0.00 | 0.00 | 0.00 | 1.94 |
7677 | 14465 | 7.354751 | TGCTTTTACCAAAGGAACATTACTT | 57.645 | 32.000 | 0.00 | 0.00 | 37.40 | 2.24 |
7748 | 14536 | 1.818959 | TTTGCTCAAGCCCACCATGC | 61.819 | 55.000 | 0.00 | 0.00 | 41.18 | 4.06 |
8650 | 15479 | 7.665690 | TGGTGTATCTTGTATTGCAACAAAAT | 58.334 | 30.769 | 0.00 | 0.00 | 38.81 | 1.82 |
8761 | 15631 | 8.777413 | TGATAATGATATTCTGCAGTACTTTGC | 58.223 | 33.333 | 14.67 | 0.00 | 44.33 | 3.68 |
8768 | 15638 | 3.067106 | TCTGCAGTACTTTGCTTACAGC | 58.933 | 45.455 | 14.67 | 0.00 | 44.38 | 4.40 |
8814 | 15698 | 7.660208 | ACTGTCTATTTTTATGAGAACCGTGTT | 59.340 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
8825 | 15709 | 0.180406 | AACCGTGTTGGAGAACTGCT | 59.820 | 50.000 | 0.00 | 0.00 | 42.00 | 4.24 |
8888 | 15777 | 3.565902 | GGCCAAGAATCCTGCATAAGTAC | 59.434 | 47.826 | 0.00 | 0.00 | 0.00 | 2.73 |
8901 | 15790 | 6.649141 | CCTGCATAAGTACAGAAAACACACTA | 59.351 | 38.462 | 0.00 | 0.00 | 35.90 | 2.74 |
9008 | 15981 | 2.542824 | CCAATTGGTGTGTGTTCGAACC | 60.543 | 50.000 | 24.78 | 16.21 | 0.00 | 3.62 |
9124 | 16097 | 4.218312 | ACTCAAACTGGCCTCTGAATTTT | 58.782 | 39.130 | 3.32 | 0.00 | 0.00 | 1.82 |
9133 | 16106 | 2.297033 | GCCTCTGAATTTTGGCACTTCA | 59.703 | 45.455 | 0.00 | 6.27 | 44.34 | 3.02 |
9134 | 16107 | 3.858503 | GCCTCTGAATTTTGGCACTTCAC | 60.859 | 47.826 | 0.00 | 0.00 | 44.34 | 3.18 |
9135 | 16108 | 3.558505 | CTCTGAATTTTGGCACTTCACG | 58.441 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
9136 | 16109 | 3.210227 | TCTGAATTTTGGCACTTCACGA | 58.790 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
9137 | 16110 | 3.820467 | TCTGAATTTTGGCACTTCACGAT | 59.180 | 39.130 | 0.00 | 0.00 | 0.00 | 3.73 |
9140 | 16113 | 4.744137 | TGAATTTTGGCACTTCACGATTTG | 59.256 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
9141 | 16114 | 4.582701 | ATTTTGGCACTTCACGATTTGA | 57.417 | 36.364 | 0.00 | 0.00 | 0.00 | 2.69 |
9145 | 16118 | 3.899734 | TGGCACTTCACGATTTGATTTG | 58.100 | 40.909 | 0.00 | 0.00 | 32.84 | 2.32 |
9148 | 16121 | 4.148696 | GGCACTTCACGATTTGATTTGTTG | 59.851 | 41.667 | 0.00 | 0.00 | 32.84 | 3.33 |
9154 | 16265 | 8.379902 | ACTTCACGATTTGATTTGTTGTTTTTC | 58.620 | 29.630 | 0.00 | 0.00 | 32.84 | 2.29 |
9168 | 16279 | 7.985634 | TGTTGTTTTTCTTTCTTGTGCTATC | 57.014 | 32.000 | 0.00 | 0.00 | 0.00 | 2.08 |
9211 | 16322 | 5.982890 | ATTGGTGAAATGGTAGGTTTCAG | 57.017 | 39.130 | 1.88 | 0.00 | 43.83 | 3.02 |
9224 | 16335 | 3.550820 | AGGTTTCAGTTGTGCACATGTA | 58.449 | 40.909 | 22.39 | 8.06 | 0.00 | 2.29 |
9228 | 16339 | 5.578727 | GGTTTCAGTTGTGCACATGTAAAAA | 59.421 | 36.000 | 22.39 | 14.30 | 0.00 | 1.94 |
9264 | 16375 | 6.931838 | ACTCTCTCCGTAACAAAATGTATGA | 58.068 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
9266 | 16377 | 5.803461 | TCTCTCCGTAACAAAATGTATGACG | 59.197 | 40.000 | 5.87 | 5.87 | 33.60 | 4.35 |
9341 | 16453 | 9.516314 | AGAGAGTATTGTTTTTGCACTTTTTAC | 57.484 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
9342 | 16454 | 9.516314 | GAGAGTATTGTTTTTGCACTTTTTACT | 57.484 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
9361 | 16473 | 1.595929 | GCGTGTTTCGAAGTGGGGA | 60.596 | 57.895 | 0.00 | 0.00 | 42.86 | 4.81 |
9367 | 16479 | 0.037590 | TTTCGAAGTGGGGATGTGGG | 59.962 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
9368 | 16480 | 1.847798 | TTCGAAGTGGGGATGTGGGG | 61.848 | 60.000 | 0.00 | 0.00 | 0.00 | 4.96 |
9369 | 16481 | 2.602676 | CGAAGTGGGGATGTGGGGT | 61.603 | 63.158 | 0.00 | 0.00 | 0.00 | 4.95 |
9370 | 16482 | 1.000896 | GAAGTGGGGATGTGGGGTG | 60.001 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
9371 | 16483 | 2.499303 | GAAGTGGGGATGTGGGGTGG | 62.499 | 65.000 | 0.00 | 0.00 | 0.00 | 4.61 |
9394 | 16506 | 4.023021 | GGGGTCACGTAATTAGCAAAACAA | 60.023 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
9400 | 16512 | 4.165779 | CGTAATTAGCAAAACAAGCCTGG | 58.834 | 43.478 | 0.00 | 0.00 | 0.00 | 4.45 |
9401 | 16513 | 3.683365 | AATTAGCAAAACAAGCCTGGG | 57.317 | 42.857 | 0.00 | 0.00 | 0.00 | 4.45 |
9402 | 16514 | 2.373335 | TTAGCAAAACAAGCCTGGGA | 57.627 | 45.000 | 0.00 | 0.00 | 0.00 | 4.37 |
9403 | 16515 | 1.909700 | TAGCAAAACAAGCCTGGGAG | 58.090 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
9404 | 16516 | 0.185901 | AGCAAAACAAGCCTGGGAGA | 59.814 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
9405 | 16517 | 0.600057 | GCAAAACAAGCCTGGGAGAG | 59.400 | 55.000 | 0.00 | 0.00 | 0.00 | 3.20 |
9406 | 16518 | 0.600057 | CAAAACAAGCCTGGGAGAGC | 59.400 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
9407 | 16519 | 0.890996 | AAAACAAGCCTGGGAGAGCG | 60.891 | 55.000 | 0.00 | 0.00 | 0.00 | 5.03 |
9408 | 16520 | 2.754664 | AAACAAGCCTGGGAGAGCGG | 62.755 | 60.000 | 0.00 | 0.00 | 0.00 | 5.52 |
9413 | 16525 | 4.598894 | CCTGGGAGAGCGGCGATG | 62.599 | 72.222 | 12.98 | 0.00 | 0.00 | 3.84 |
9414 | 16526 | 4.598894 | CTGGGAGAGCGGCGATGG | 62.599 | 72.222 | 12.98 | 0.00 | 0.00 | 3.51 |
9416 | 16528 | 4.899239 | GGGAGAGCGGCGATGGTG | 62.899 | 72.222 | 12.98 | 0.00 | 0.00 | 4.17 |
9418 | 16530 | 4.819761 | GAGAGCGGCGATGGTGCA | 62.820 | 66.667 | 12.98 | 0.00 | 36.28 | 4.57 |
9427 | 16539 | 3.127533 | GATGGTGCACACGGGCTC | 61.128 | 66.667 | 20.43 | 0.00 | 34.04 | 4.70 |
9441 | 16553 | 4.498520 | GCTCGCCTGCTCACGCTA | 62.499 | 66.667 | 0.00 | 0.00 | 36.97 | 4.26 |
9442 | 16554 | 2.181777 | CTCGCCTGCTCACGCTAA | 59.818 | 61.111 | 0.00 | 0.00 | 36.97 | 3.09 |
9443 | 16555 | 1.875813 | CTCGCCTGCTCACGCTAAG | 60.876 | 63.158 | 0.00 | 0.00 | 36.97 | 2.18 |
9444 | 16556 | 2.125912 | CGCCTGCTCACGCTAAGT | 60.126 | 61.111 | 0.00 | 0.00 | 36.97 | 2.24 |
9454 | 16566 | 0.999406 | CACGCTAAGTGTCCCAATCG | 59.001 | 55.000 | 0.00 | 0.00 | 45.51 | 3.34 |
9455 | 16567 | 0.892755 | ACGCTAAGTGTCCCAATCGA | 59.107 | 50.000 | 0.00 | 0.00 | 0.00 | 3.59 |
9456 | 16568 | 1.274167 | ACGCTAAGTGTCCCAATCGAA | 59.726 | 47.619 | 0.00 | 0.00 | 0.00 | 3.71 |
9457 | 16569 | 1.659098 | CGCTAAGTGTCCCAATCGAAC | 59.341 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
9458 | 16570 | 2.695359 | GCTAAGTGTCCCAATCGAACA | 58.305 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
9459 | 16571 | 2.415512 | GCTAAGTGTCCCAATCGAACAC | 59.584 | 50.000 | 8.89 | 8.89 | 42.80 | 3.32 |
9462 | 16574 | 1.156736 | GTGTCCCAATCGAACACTGG | 58.843 | 55.000 | 9.53 | 4.97 | 40.07 | 4.00 |
9463 | 16575 | 0.605319 | TGTCCCAATCGAACACTGGC | 60.605 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
9464 | 16576 | 1.375396 | TCCCAATCGAACACTGGCG | 60.375 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
9465 | 16577 | 1.375396 | CCCAATCGAACACTGGCGA | 60.375 | 57.895 | 0.00 | 0.00 | 41.14 | 5.54 |
9466 | 16578 | 1.361668 | CCCAATCGAACACTGGCGAG | 61.362 | 60.000 | 0.00 | 0.00 | 40.14 | 5.03 |
9467 | 16579 | 0.670546 | CCAATCGAACACTGGCGAGT | 60.671 | 55.000 | 0.00 | 0.00 | 40.14 | 4.18 |
9474 | 16586 | 2.738521 | CACTGGCGAGTGGAACCG | 60.739 | 66.667 | 20.15 | 0.00 | 45.26 | 4.44 |
9475 | 16587 | 4.003788 | ACTGGCGAGTGGAACCGG | 62.004 | 66.667 | 0.00 | 0.00 | 37.80 | 5.28 |
9476 | 16588 | 4.760047 | CTGGCGAGTGGAACCGGG | 62.760 | 72.222 | 6.32 | 0.00 | 37.80 | 5.73 |
9479 | 16591 | 4.778143 | GCGAGTGGAACCGGGCAT | 62.778 | 66.667 | 6.32 | 0.00 | 37.80 | 4.40 |
9480 | 16592 | 2.046314 | CGAGTGGAACCGGGCATT | 60.046 | 61.111 | 6.32 | 0.00 | 37.80 | 3.56 |
9481 | 16593 | 2.106683 | CGAGTGGAACCGGGCATTC | 61.107 | 63.158 | 6.32 | 0.00 | 37.80 | 2.67 |
9482 | 16594 | 1.002624 | GAGTGGAACCGGGCATTCA | 60.003 | 57.895 | 6.32 | 0.00 | 37.80 | 2.57 |
9483 | 16595 | 0.608035 | GAGTGGAACCGGGCATTCAA | 60.608 | 55.000 | 6.32 | 0.00 | 37.80 | 2.69 |
9484 | 16596 | 0.039618 | AGTGGAACCGGGCATTCAAT | 59.960 | 50.000 | 6.32 | 0.00 | 37.80 | 2.57 |
9485 | 16597 | 0.173255 | GTGGAACCGGGCATTCAATG | 59.827 | 55.000 | 6.32 | 0.00 | 0.00 | 2.82 |
9495 | 16607 | 2.016961 | CATTCAATGCGGTCGGAGG | 58.983 | 57.895 | 0.00 | 0.00 | 0.00 | 4.30 |
9496 | 16608 | 1.153168 | ATTCAATGCGGTCGGAGGG | 60.153 | 57.895 | 0.00 | 0.00 | 0.00 | 4.30 |
9497 | 16609 | 3.969250 | TTCAATGCGGTCGGAGGGC | 62.969 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
9504 | 16616 | 3.948719 | GGTCGGAGGGCCAACACA | 61.949 | 66.667 | 6.18 | 0.00 | 0.00 | 3.72 |
9505 | 16617 | 2.668550 | GTCGGAGGGCCAACACAC | 60.669 | 66.667 | 6.18 | 0.00 | 0.00 | 3.82 |
9506 | 16618 | 3.164977 | TCGGAGGGCCAACACACA | 61.165 | 61.111 | 6.18 | 0.00 | 0.00 | 3.72 |
9507 | 16619 | 2.034066 | CGGAGGGCCAACACACAT | 59.966 | 61.111 | 6.18 | 0.00 | 0.00 | 3.21 |
9508 | 16620 | 2.334946 | CGGAGGGCCAACACACATG | 61.335 | 63.158 | 6.18 | 0.00 | 0.00 | 3.21 |
9509 | 16621 | 1.228552 | GGAGGGCCAACACACATGT | 60.229 | 57.895 | 6.18 | 0.00 | 42.46 | 3.21 |
9510 | 16622 | 0.037590 | GGAGGGCCAACACACATGTA | 59.962 | 55.000 | 6.18 | 0.00 | 38.45 | 2.29 |
9511 | 16623 | 1.165270 | GAGGGCCAACACACATGTAC | 58.835 | 55.000 | 6.18 | 0.00 | 38.45 | 2.90 |
9512 | 16624 | 0.605319 | AGGGCCAACACACATGTACG | 60.605 | 55.000 | 6.18 | 0.00 | 38.45 | 3.67 |
9513 | 16625 | 0.887387 | GGGCCAACACACATGTACGT | 60.887 | 55.000 | 4.39 | 0.00 | 38.45 | 3.57 |
9514 | 16626 | 1.608542 | GGGCCAACACACATGTACGTA | 60.609 | 52.381 | 4.39 | 0.00 | 38.45 | 3.57 |
9515 | 16627 | 2.352388 | GGCCAACACACATGTACGTAT | 58.648 | 47.619 | 0.00 | 0.00 | 38.45 | 3.06 |
9516 | 16628 | 2.095213 | GGCCAACACACATGTACGTATG | 59.905 | 50.000 | 0.00 | 0.00 | 38.45 | 2.39 |
9517 | 16629 | 2.095213 | GCCAACACACATGTACGTATGG | 59.905 | 50.000 | 0.00 | 6.95 | 38.45 | 2.74 |
9518 | 16630 | 3.331150 | CCAACACACATGTACGTATGGT | 58.669 | 45.455 | 0.00 | 0.00 | 38.45 | 3.55 |
9519 | 16631 | 3.124466 | CCAACACACATGTACGTATGGTG | 59.876 | 47.826 | 17.33 | 17.33 | 38.45 | 4.17 |
9520 | 16632 | 2.967362 | ACACACATGTACGTATGGTGG | 58.033 | 47.619 | 20.77 | 14.64 | 37.26 | 4.61 |
9521 | 16633 | 2.563620 | ACACACATGTACGTATGGTGGA | 59.436 | 45.455 | 20.77 | 0.00 | 37.26 | 4.02 |
9522 | 16634 | 3.007074 | ACACACATGTACGTATGGTGGAA | 59.993 | 43.478 | 20.77 | 0.00 | 37.26 | 3.53 |
9523 | 16635 | 3.369756 | CACACATGTACGTATGGTGGAAC | 59.630 | 47.826 | 20.77 | 2.36 | 31.43 | 3.62 |
9524 | 16636 | 3.007074 | ACACATGTACGTATGGTGGAACA | 59.993 | 43.478 | 20.77 | 7.39 | 39.98 | 3.18 |
9525 | 16637 | 3.616821 | CACATGTACGTATGGTGGAACAG | 59.383 | 47.826 | 0.00 | 0.05 | 41.80 | 3.16 |
9526 | 16638 | 3.194861 | CATGTACGTATGGTGGAACAGG | 58.805 | 50.000 | 0.00 | 0.00 | 41.80 | 4.00 |
9527 | 16639 | 2.527497 | TGTACGTATGGTGGAACAGGA | 58.473 | 47.619 | 0.00 | 0.00 | 41.80 | 3.86 |
9528 | 16640 | 2.494471 | TGTACGTATGGTGGAACAGGAG | 59.506 | 50.000 | 0.00 | 0.00 | 41.80 | 3.69 |
9529 | 16641 | 1.640917 | ACGTATGGTGGAACAGGAGT | 58.359 | 50.000 | 0.00 | 0.00 | 41.80 | 3.85 |
9530 | 16642 | 2.811410 | ACGTATGGTGGAACAGGAGTA | 58.189 | 47.619 | 0.00 | 0.00 | 41.80 | 2.59 |
9531 | 16643 | 3.371965 | ACGTATGGTGGAACAGGAGTAT | 58.628 | 45.455 | 0.00 | 0.00 | 41.80 | 2.12 |
9532 | 16644 | 4.539726 | ACGTATGGTGGAACAGGAGTATA | 58.460 | 43.478 | 0.00 | 0.00 | 41.80 | 1.47 |
9533 | 16645 | 4.340381 | ACGTATGGTGGAACAGGAGTATAC | 59.660 | 45.833 | 0.00 | 0.00 | 41.80 | 1.47 |
9534 | 16646 | 4.556104 | CGTATGGTGGAACAGGAGTATACG | 60.556 | 50.000 | 0.00 | 0.00 | 41.80 | 3.06 |
9535 | 16647 | 2.104967 | TGGTGGAACAGGAGTATACGG | 58.895 | 52.381 | 0.00 | 0.00 | 41.80 | 4.02 |
9536 | 16648 | 2.105766 | GGTGGAACAGGAGTATACGGT | 58.894 | 52.381 | 0.00 | 0.00 | 41.80 | 4.83 |
9537 | 16649 | 2.159142 | GGTGGAACAGGAGTATACGGTG | 60.159 | 54.545 | 0.00 | 0.00 | 41.80 | 4.94 |
9538 | 16650 | 1.479323 | TGGAACAGGAGTATACGGTGC | 59.521 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
9539 | 16651 | 1.535437 | GGAACAGGAGTATACGGTGCG | 60.535 | 57.143 | 0.00 | 0.00 | 0.00 | 5.34 |
9540 | 16652 | 0.179119 | AACAGGAGTATACGGTGCGC | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 6.09 |
9541 | 16653 | 1.035932 | ACAGGAGTATACGGTGCGCT | 61.036 | 55.000 | 9.73 | 0.00 | 0.00 | 5.92 |
9542 | 16654 | 0.317938 | CAGGAGTATACGGTGCGCTC | 60.318 | 60.000 | 9.73 | 4.47 | 0.00 | 5.03 |
9543 | 16655 | 1.370172 | GGAGTATACGGTGCGCTCG | 60.370 | 63.158 | 18.89 | 18.89 | 0.00 | 5.03 |
9544 | 16656 | 2.009755 | GAGTATACGGTGCGCTCGC | 61.010 | 63.158 | 20.03 | 7.38 | 42.35 | 5.03 |
9545 | 16657 | 3.028590 | GTATACGGTGCGCTCGCC | 61.029 | 66.667 | 20.03 | 13.37 | 41.09 | 5.54 |
9555 | 16667 | 4.363990 | CGCTCGCCGGGCAGATAT | 62.364 | 66.667 | 20.71 | 0.00 | 0.00 | 1.63 |
9556 | 16668 | 2.970639 | GCTCGCCGGGCAGATATA | 59.029 | 61.111 | 20.71 | 0.00 | 0.00 | 0.86 |
9557 | 16669 | 1.292223 | GCTCGCCGGGCAGATATAA | 59.708 | 57.895 | 20.71 | 0.00 | 0.00 | 0.98 |
9558 | 16670 | 0.737715 | GCTCGCCGGGCAGATATAAG | 60.738 | 60.000 | 20.71 | 6.31 | 0.00 | 1.73 |
9559 | 16671 | 0.108615 | CTCGCCGGGCAGATATAAGG | 60.109 | 60.000 | 20.71 | 0.00 | 0.00 | 2.69 |
9560 | 16672 | 0.541063 | TCGCCGGGCAGATATAAGGA | 60.541 | 55.000 | 20.71 | 1.29 | 0.00 | 3.36 |
9561 | 16673 | 0.537188 | CGCCGGGCAGATATAAGGAT | 59.463 | 55.000 | 20.71 | 0.00 | 0.00 | 3.24 |
9562 | 16674 | 1.471676 | CGCCGGGCAGATATAAGGATC | 60.472 | 57.143 | 20.71 | 0.00 | 0.00 | 3.36 |
9563 | 16675 | 1.134371 | GCCGGGCAGATATAAGGATCC | 60.134 | 57.143 | 15.62 | 2.48 | 0.00 | 3.36 |
9564 | 16676 | 1.486726 | CCGGGCAGATATAAGGATCCC | 59.513 | 57.143 | 8.55 | 0.00 | 0.00 | 3.85 |
9565 | 16677 | 2.990066 | GGGCAGATATAAGGATCCCG | 57.010 | 55.000 | 8.55 | 0.00 | 0.00 | 5.14 |
9566 | 16678 | 2.188817 | GGGCAGATATAAGGATCCCGT | 58.811 | 52.381 | 8.55 | 0.00 | 0.00 | 5.28 |
9567 | 16679 | 2.168728 | GGGCAGATATAAGGATCCCGTC | 59.831 | 54.545 | 8.55 | 0.00 | 0.00 | 4.79 |
9568 | 16680 | 2.832129 | GGCAGATATAAGGATCCCGTCA | 59.168 | 50.000 | 8.55 | 0.00 | 0.00 | 4.35 |
9569 | 16681 | 3.368531 | GGCAGATATAAGGATCCCGTCAC | 60.369 | 52.174 | 8.55 | 0.00 | 0.00 | 3.67 |
9570 | 16682 | 3.673594 | GCAGATATAAGGATCCCGTCACG | 60.674 | 52.174 | 8.55 | 0.00 | 0.00 | 4.35 |
9572 | 16684 | 0.963962 | TATAAGGATCCCGTCACGGC | 59.036 | 55.000 | 12.05 | 0.00 | 46.86 | 5.68 |
9573 | 16685 | 1.046472 | ATAAGGATCCCGTCACGGCA | 61.046 | 55.000 | 12.05 | 0.00 | 46.86 | 5.69 |
9574 | 16686 | 1.672854 | TAAGGATCCCGTCACGGCAG | 61.673 | 60.000 | 12.05 | 0.00 | 46.86 | 4.85 |
9575 | 16687 | 4.530857 | GGATCCCGTCACGGCAGG | 62.531 | 72.222 | 12.05 | 0.00 | 46.86 | 4.85 |
9576 | 16688 | 3.771160 | GATCCCGTCACGGCAGGT | 61.771 | 66.667 | 12.05 | 0.00 | 46.86 | 4.00 |
9577 | 16689 | 3.310860 | GATCCCGTCACGGCAGGTT | 62.311 | 63.158 | 12.05 | 0.00 | 46.86 | 3.50 |
9578 | 16690 | 3.605749 | ATCCCGTCACGGCAGGTTG | 62.606 | 63.158 | 12.05 | 0.00 | 46.86 | 3.77 |
9580 | 16692 | 4.988598 | CCGTCACGGCAGGTTGCT | 62.989 | 66.667 | 1.50 | 0.00 | 44.28 | 3.91 |
9581 | 16693 | 2.048597 | CGTCACGGCAGGTTGCTA | 60.049 | 61.111 | 0.67 | 0.00 | 44.28 | 3.49 |
9582 | 16694 | 2.380410 | CGTCACGGCAGGTTGCTAC | 61.380 | 63.158 | 0.67 | 0.00 | 44.28 | 3.58 |
9583 | 16695 | 2.033194 | GTCACGGCAGGTTGCTACC | 61.033 | 63.158 | 9.54 | 9.54 | 44.28 | 3.18 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
203 | 206 | 3.274455 | TAAAACGGTCGGCGCGGTA | 62.274 | 57.895 | 15.06 | 0.00 | 0.00 | 4.02 |
217 | 220 | 2.266689 | GGGGCTCGGCTCGTAAAA | 59.733 | 61.111 | 0.00 | 0.00 | 0.00 | 1.52 |
218 | 221 | 2.682494 | AGGGGCTCGGCTCGTAAA | 60.682 | 61.111 | 0.00 | 0.00 | 0.00 | 2.01 |
286 | 293 | 4.308458 | TCGTTGGTGGGTGCGAGG | 62.308 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
287 | 294 | 2.738521 | CTCGTTGGTGGGTGCGAG | 60.739 | 66.667 | 0.00 | 0.00 | 43.42 | 5.03 |
288 | 295 | 4.308458 | CCTCGTTGGTGGGTGCGA | 62.308 | 66.667 | 0.00 | 0.00 | 0.00 | 5.10 |
289 | 296 | 4.308458 | TCCTCGTTGGTGGGTGCG | 62.308 | 66.667 | 0.00 | 0.00 | 37.07 | 5.34 |
290 | 297 | 2.358737 | CTCCTCGTTGGTGGGTGC | 60.359 | 66.667 | 0.00 | 0.00 | 37.07 | 5.01 |
291 | 298 | 2.347490 | CCTCCTCGTTGGTGGGTG | 59.653 | 66.667 | 9.39 | 0.00 | 43.83 | 4.61 |
292 | 299 | 3.637273 | GCCTCCTCGTTGGTGGGT | 61.637 | 66.667 | 15.88 | 0.00 | 46.74 | 4.51 |
390 | 400 | 6.968263 | TCTCCCAGTGATACTTGAATCTAG | 57.032 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
414 | 424 | 4.028993 | AGCCTTTTTATCGTTCCCTTCA | 57.971 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
436 | 680 | 1.675552 | CTGGAAACAAACACCCTCGT | 58.324 | 50.000 | 0.00 | 0.00 | 42.06 | 4.18 |
437 | 681 | 0.951558 | CCTGGAAACAAACACCCTCG | 59.048 | 55.000 | 0.00 | 0.00 | 42.06 | 4.63 |
439 | 683 | 2.838637 | TTCCTGGAAACAAACACCCT | 57.161 | 45.000 | 6.68 | 0.00 | 42.06 | 4.34 |
441 | 685 | 6.426633 | CCAATAAATTCCTGGAAACAAACACC | 59.573 | 38.462 | 14.03 | 0.00 | 42.06 | 4.16 |
444 | 688 | 6.230472 | AGCCAATAAATTCCTGGAAACAAAC | 58.770 | 36.000 | 14.03 | 0.00 | 42.06 | 2.93 |
447 | 691 | 7.546250 | TTAAGCCAATAAATTCCTGGAAACA | 57.454 | 32.000 | 14.03 | 1.86 | 39.59 | 2.83 |
448 | 692 | 8.311109 | TCTTTAAGCCAATAAATTCCTGGAAAC | 58.689 | 33.333 | 14.03 | 0.00 | 31.38 | 2.78 |
450 | 694 | 7.673926 | AGTCTTTAAGCCAATAAATTCCTGGAA | 59.326 | 33.333 | 12.26 | 12.26 | 31.38 | 3.53 |
452 | 696 | 7.410120 | AGTCTTTAAGCCAATAAATTCCTGG | 57.590 | 36.000 | 0.00 | 0.00 | 0.00 | 4.45 |
453 | 697 | 9.788960 | GTAAGTCTTTAAGCCAATAAATTCCTG | 57.211 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
454 | 698 | 9.528489 | TGTAAGTCTTTAAGCCAATAAATTCCT | 57.472 | 29.630 | 0.00 | 0.00 | 0.00 | 3.36 |
486 | 730 | 9.679661 | TGTTTGATTTAGATGGCACTTATAGAA | 57.320 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
487 | 731 | 9.330063 | CTGTTTGATTTAGATGGCACTTATAGA | 57.670 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
488 | 732 | 8.562892 | CCTGTTTGATTTAGATGGCACTTATAG | 58.437 | 37.037 | 0.00 | 0.00 | 0.00 | 1.31 |
490 | 734 | 7.118723 | TCCTGTTTGATTTAGATGGCACTTAT | 58.881 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
491 | 735 | 6.480763 | TCCTGTTTGATTTAGATGGCACTTA | 58.519 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
492 | 736 | 5.324409 | TCCTGTTTGATTTAGATGGCACTT | 58.676 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
494 | 738 | 4.943705 | TCTCCTGTTTGATTTAGATGGCAC | 59.056 | 41.667 | 0.00 | 0.00 | 0.00 | 5.01 |
496 | 740 | 5.295540 | GTCTCTCCTGTTTGATTTAGATGGC | 59.704 | 44.000 | 0.00 | 0.00 | 0.00 | 4.40 |
498 | 742 | 9.829507 | ATAAGTCTCTCCTGTTTGATTTAGATG | 57.170 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
511 | 1994 | 7.562088 | ACTTTAAGTCCCTATAAGTCTCTCCTG | 59.438 | 40.741 | 0.00 | 0.00 | 0.00 | 3.86 |
512 | 1995 | 7.562088 | CACTTTAAGTCCCTATAAGTCTCTCCT | 59.438 | 40.741 | 0.00 | 0.00 | 0.00 | 3.69 |
513 | 1996 | 7.560626 | TCACTTTAAGTCCCTATAAGTCTCTCC | 59.439 | 40.741 | 0.00 | 0.00 | 0.00 | 3.71 |
515 | 1998 | 7.068962 | GCTCACTTTAAGTCCCTATAAGTCTCT | 59.931 | 40.741 | 0.00 | 0.00 | 0.00 | 3.10 |
516 | 1999 | 7.147880 | TGCTCACTTTAAGTCCCTATAAGTCTC | 60.148 | 40.741 | 0.00 | 0.00 | 0.00 | 3.36 |
517 | 2000 | 6.668283 | TGCTCACTTTAAGTCCCTATAAGTCT | 59.332 | 38.462 | 0.00 | 0.00 | 0.00 | 3.24 |
518 | 2001 | 6.875076 | TGCTCACTTTAAGTCCCTATAAGTC | 58.125 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
520 | 2003 | 8.616076 | CAAATGCTCACTTTAAGTCCCTATAAG | 58.384 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
521 | 2004 | 7.556275 | CCAAATGCTCACTTTAAGTCCCTATAA | 59.444 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
522 | 2005 | 7.054124 | CCAAATGCTCACTTTAAGTCCCTATA | 58.946 | 38.462 | 0.00 | 0.00 | 0.00 | 1.31 |
523 | 2006 | 5.888161 | CCAAATGCTCACTTTAAGTCCCTAT | 59.112 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
525 | 2008 | 4.082125 | CCAAATGCTCACTTTAAGTCCCT | 58.918 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
526 | 2009 | 3.193479 | CCCAAATGCTCACTTTAAGTCCC | 59.807 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
527 | 2010 | 4.079253 | TCCCAAATGCTCACTTTAAGTCC | 58.921 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
528 | 2011 | 5.904362 | ATCCCAAATGCTCACTTTAAGTC | 57.096 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
530 | 2013 | 8.469200 | TCATAAATCCCAAATGCTCACTTTAAG | 58.531 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
532 | 2015 | 7.953005 | TCATAAATCCCAAATGCTCACTTTA | 57.047 | 32.000 | 0.00 | 0.00 | 0.00 | 1.85 |
533 | 2016 | 6.855763 | TCATAAATCCCAAATGCTCACTTT | 57.144 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
534 | 2017 | 6.855763 | TTCATAAATCCCAAATGCTCACTT | 57.144 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
535 | 2018 | 6.855763 | TTTCATAAATCCCAAATGCTCACT | 57.144 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
536 | 2019 | 9.252962 | CTTATTTCATAAATCCCAAATGCTCAC | 57.747 | 33.333 | 0.00 | 0.00 | 32.38 | 3.51 |
539 | 2022 | 9.205513 | AGTCTTATTTCATAAATCCCAAATGCT | 57.794 | 29.630 | 0.00 | 0.00 | 32.38 | 3.79 |
543 | 2026 | 9.973661 | TGAGAGTCTTATTTCATAAATCCCAAA | 57.026 | 29.630 | 0.00 | 0.00 | 32.38 | 3.28 |
545 | 2028 | 9.618890 | CTTGAGAGTCTTATTTCATAAATCCCA | 57.381 | 33.333 | 0.00 | 0.00 | 32.38 | 4.37 |
546 | 2029 | 9.620259 | ACTTGAGAGTCTTATTTCATAAATCCC | 57.380 | 33.333 | 0.00 | 0.00 | 32.38 | 3.85 |
551 | 2034 | 9.488762 | TCCCTACTTGAGAGTCTTATTTCATAA | 57.511 | 33.333 | 0.00 | 0.00 | 37.33 | 1.90 |
552 | 2035 | 8.915036 | GTCCCTACTTGAGAGTCTTATTTCATA | 58.085 | 37.037 | 0.00 | 0.00 | 37.33 | 2.15 |
553 | 2036 | 7.621683 | AGTCCCTACTTGAGAGTCTTATTTCAT | 59.378 | 37.037 | 0.00 | 0.00 | 37.33 | 2.57 |
555 | 2038 | 7.412853 | AGTCCCTACTTGAGAGTCTTATTTC | 57.587 | 40.000 | 0.00 | 0.00 | 37.33 | 2.17 |
556 | 2039 | 7.800300 | AAGTCCCTACTTGAGAGTCTTATTT | 57.200 | 36.000 | 0.00 | 0.00 | 44.40 | 1.40 |
560 | 2043 | 7.064229 | CCTATAAGTCCCTACTTGAGAGTCTT | 58.936 | 42.308 | 0.00 | 0.00 | 45.63 | 3.01 |
561 | 2044 | 6.411086 | CCCTATAAGTCCCTACTTGAGAGTCT | 60.411 | 46.154 | 0.00 | 0.00 | 45.63 | 3.24 |
562 | 2045 | 5.771165 | CCCTATAAGTCCCTACTTGAGAGTC | 59.229 | 48.000 | 1.11 | 0.00 | 45.63 | 3.36 |
563 | 2046 | 5.435707 | TCCCTATAAGTCCCTACTTGAGAGT | 59.564 | 44.000 | 1.11 | 0.00 | 45.63 | 3.24 |
564 | 2047 | 5.771165 | GTCCCTATAAGTCCCTACTTGAGAG | 59.229 | 48.000 | 1.11 | 0.00 | 45.63 | 3.20 |
565 | 2048 | 5.435707 | AGTCCCTATAAGTCCCTACTTGAGA | 59.564 | 44.000 | 1.11 | 0.00 | 45.63 | 3.27 |
566 | 2049 | 5.707495 | AGTCCCTATAAGTCCCTACTTGAG | 58.293 | 45.833 | 1.11 | 0.00 | 45.63 | 3.02 |
567 | 2050 | 5.745988 | AGTCCCTATAAGTCCCTACTTGA | 57.254 | 43.478 | 1.11 | 0.00 | 45.63 | 3.02 |
568 | 2051 | 9.245481 | CTATAAGTCCCTATAAGTCCCTACTTG | 57.755 | 40.741 | 1.11 | 0.00 | 45.63 | 3.16 |
570 | 2053 | 8.537019 | ACTATAAGTCCCTATAAGTCCCTACT | 57.463 | 38.462 | 0.00 | 0.00 | 37.65 | 2.57 |
571 | 2054 | 9.022884 | CAACTATAAGTCCCTATAAGTCCCTAC | 57.977 | 40.741 | 0.00 | 0.00 | 0.00 | 3.18 |
572 | 2055 | 8.740512 | ACAACTATAAGTCCCTATAAGTCCCTA | 58.259 | 37.037 | 0.00 | 0.00 | 0.00 | 3.53 |
574 | 2057 | 7.852550 | ACAACTATAAGTCCCTATAAGTCCC | 57.147 | 40.000 | 0.00 | 0.00 | 0.00 | 4.46 |
603 | 2086 | 9.496710 | TGAAACTTATAAGTCCCTATAAGACCA | 57.503 | 33.333 | 18.28 | 7.93 | 41.46 | 4.02 |
605 | 2088 | 9.984190 | CCTGAAACTTATAAGTCCCTATAAGAC | 57.016 | 37.037 | 18.28 | 2.75 | 41.46 | 3.01 |
606 | 2089 | 9.947189 | TCCTGAAACTTATAAGTCCCTATAAGA | 57.053 | 33.333 | 18.28 | 6.12 | 41.46 | 2.10 |
609 | 2092 | 8.931568 | GGTTCCTGAAACTTATAAGTCCCTATA | 58.068 | 37.037 | 18.28 | 1.68 | 38.57 | 1.31 |
610 | 2093 | 7.404980 | TGGTTCCTGAAACTTATAAGTCCCTAT | 59.595 | 37.037 | 18.28 | 0.00 | 38.57 | 2.57 |
611 | 2094 | 6.731919 | TGGTTCCTGAAACTTATAAGTCCCTA | 59.268 | 38.462 | 18.28 | 5.36 | 38.57 | 3.53 |
612 | 2095 | 5.550403 | TGGTTCCTGAAACTTATAAGTCCCT | 59.450 | 40.000 | 18.28 | 6.56 | 38.57 | 4.20 |
614 | 2097 | 7.229907 | TGTTTGGTTCCTGAAACTTATAAGTCC | 59.770 | 37.037 | 18.28 | 12.51 | 38.57 | 3.85 |
615 | 2098 | 8.161699 | TGTTTGGTTCCTGAAACTTATAAGTC | 57.838 | 34.615 | 18.28 | 7.86 | 38.57 | 3.01 |
616 | 2099 | 8.528044 | TTGTTTGGTTCCTGAAACTTATAAGT | 57.472 | 30.769 | 12.50 | 12.50 | 42.04 | 2.24 |
617 | 2100 | 8.630037 | ACTTGTTTGGTTCCTGAAACTTATAAG | 58.370 | 33.333 | 11.05 | 11.05 | 38.02 | 1.73 |
618 | 2101 | 8.528044 | ACTTGTTTGGTTCCTGAAACTTATAA | 57.472 | 30.769 | 0.00 | 0.00 | 38.02 | 0.98 |
620 | 2103 | 7.230712 | CCTACTTGTTTGGTTCCTGAAACTTAT | 59.769 | 37.037 | 0.00 | 0.00 | 38.02 | 1.73 |
622 | 2105 | 5.359860 | CCTACTTGTTTGGTTCCTGAAACTT | 59.640 | 40.000 | 0.00 | 0.00 | 38.02 | 2.66 |
623 | 2106 | 4.887655 | CCTACTTGTTTGGTTCCTGAAACT | 59.112 | 41.667 | 0.00 | 0.00 | 38.02 | 2.66 |
624 | 2107 | 4.037565 | CCCTACTTGTTTGGTTCCTGAAAC | 59.962 | 45.833 | 0.00 | 0.00 | 37.12 | 2.78 |
625 | 2108 | 4.079672 | TCCCTACTTGTTTGGTTCCTGAAA | 60.080 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
629 | 2112 | 3.053826 | AGTCCCTACTTGTTTGGTTCCT | 58.946 | 45.455 | 0.00 | 0.00 | 29.00 | 3.36 |
630 | 2113 | 3.503800 | AGTCCCTACTTGTTTGGTTCC | 57.496 | 47.619 | 0.00 | 0.00 | 29.00 | 3.62 |
631 | 2114 | 5.847111 | AAAAGTCCCTACTTGTTTGGTTC | 57.153 | 39.130 | 0.00 | 0.00 | 45.37 | 3.62 |
632 | 2115 | 5.831525 | CCTAAAAGTCCCTACTTGTTTGGTT | 59.168 | 40.000 | 0.00 | 0.00 | 45.37 | 3.67 |
633 | 2116 | 5.382616 | CCTAAAAGTCCCTACTTGTTTGGT | 58.617 | 41.667 | 0.00 | 0.00 | 45.37 | 3.67 |
634 | 2117 | 4.765339 | CCCTAAAAGTCCCTACTTGTTTGG | 59.235 | 45.833 | 0.00 | 0.00 | 45.37 | 3.28 |
635 | 2118 | 5.472478 | GTCCCTAAAAGTCCCTACTTGTTTG | 59.528 | 44.000 | 0.00 | 0.00 | 45.37 | 2.93 |
636 | 2119 | 5.371769 | AGTCCCTAAAAGTCCCTACTTGTTT | 59.628 | 40.000 | 0.00 | 0.00 | 45.37 | 2.83 |
637 | 2120 | 4.912133 | AGTCCCTAAAAGTCCCTACTTGTT | 59.088 | 41.667 | 0.00 | 0.00 | 45.37 | 2.83 |
639 | 2122 | 5.246307 | CAAGTCCCTAAAAGTCCCTACTTG | 58.754 | 45.833 | 0.00 | 0.00 | 45.37 | 3.16 |
641 | 2124 | 3.844804 | CCAAGTCCCTAAAAGTCCCTACT | 59.155 | 47.826 | 0.00 | 0.00 | 37.65 | 2.57 |
642 | 2125 | 3.054582 | CCCAAGTCCCTAAAAGTCCCTAC | 60.055 | 52.174 | 0.00 | 0.00 | 0.00 | 3.18 |
643 | 2126 | 3.181392 | TCCCAAGTCCCTAAAAGTCCCTA | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 3.53 |
646 | 2129 | 2.643304 | AGTCCCAAGTCCCTAAAAGTCC | 59.357 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
647 | 2130 | 4.368565 | AAGTCCCAAGTCCCTAAAAGTC | 57.631 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
649 | 2132 | 9.475620 | AATTTATAAGTCCCAAGTCCCTAAAAG | 57.524 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
651 | 2134 | 7.837187 | CCAATTTATAAGTCCCAAGTCCCTAAA | 59.163 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
653 | 2136 | 6.126303 | CCCAATTTATAAGTCCCAAGTCCCTA | 60.126 | 42.308 | 0.00 | 0.00 | 0.00 | 3.53 |
656 | 2139 | 5.593095 | GTCCCAATTTATAAGTCCCAAGTCC | 59.407 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
657 | 2140 | 6.424032 | AGTCCCAATTTATAAGTCCCAAGTC | 58.576 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
658 | 2141 | 6.402981 | AGTCCCAATTTATAAGTCCCAAGT | 57.597 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
659 | 2142 | 8.817092 | TTTAGTCCCAATTTATAAGTCCCAAG | 57.183 | 34.615 | 0.00 | 0.00 | 0.00 | 3.61 |
660 | 2143 | 9.603189 | TTTTTAGTCCCAATTTATAAGTCCCAA | 57.397 | 29.630 | 0.00 | 0.00 | 0.00 | 4.12 |
689 | 2172 | 9.244799 | CCTTGTTTGGTTCATAAGTTTTAGAAC | 57.755 | 33.333 | 0.00 | 0.00 | 39.59 | 3.01 |
690 | 2173 | 7.923878 | GCCTTGTTTGGTTCATAAGTTTTAGAA | 59.076 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
692 | 2175 | 6.645003 | GGCCTTGTTTGGTTCATAAGTTTTAG | 59.355 | 38.462 | 0.00 | 0.00 | 0.00 | 1.85 |
693 | 2176 | 6.325286 | AGGCCTTGTTTGGTTCATAAGTTTTA | 59.675 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
694 | 2177 | 5.130311 | AGGCCTTGTTTGGTTCATAAGTTTT | 59.870 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
695 | 2178 | 4.653801 | AGGCCTTGTTTGGTTCATAAGTTT | 59.346 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
696 | 2179 | 4.223144 | AGGCCTTGTTTGGTTCATAAGTT | 58.777 | 39.130 | 0.00 | 0.00 | 0.00 | 2.66 |
697 | 2180 | 3.844640 | AGGCCTTGTTTGGTTCATAAGT | 58.155 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
698 | 2181 | 5.418840 | ACATAGGCCTTGTTTGGTTCATAAG | 59.581 | 40.000 | 12.58 | 0.00 | 0.00 | 1.73 |
699 | 2182 | 5.329399 | ACATAGGCCTTGTTTGGTTCATAA | 58.671 | 37.500 | 12.58 | 0.00 | 0.00 | 1.90 |
700 | 2183 | 4.929479 | ACATAGGCCTTGTTTGGTTCATA | 58.071 | 39.130 | 12.58 | 0.00 | 0.00 | 2.15 |
701 | 2184 | 3.778265 | ACATAGGCCTTGTTTGGTTCAT | 58.222 | 40.909 | 12.58 | 0.00 | 0.00 | 2.57 |
702 | 2185 | 3.237268 | ACATAGGCCTTGTTTGGTTCA | 57.763 | 42.857 | 12.58 | 0.00 | 0.00 | 3.18 |
703 | 2186 | 4.156008 | CAGTACATAGGCCTTGTTTGGTTC | 59.844 | 45.833 | 12.58 | 0.00 | 0.00 | 3.62 |
704 | 2187 | 4.079253 | CAGTACATAGGCCTTGTTTGGTT | 58.921 | 43.478 | 12.58 | 0.00 | 0.00 | 3.67 |
705 | 2188 | 3.073946 | ACAGTACATAGGCCTTGTTTGGT | 59.926 | 43.478 | 12.58 | 10.63 | 0.00 | 3.67 |
706 | 2189 | 3.686016 | ACAGTACATAGGCCTTGTTTGG | 58.314 | 45.455 | 12.58 | 10.05 | 0.00 | 3.28 |
707 | 2190 | 7.715249 | ACATATACAGTACATAGGCCTTGTTTG | 59.285 | 37.037 | 12.58 | 17.43 | 0.00 | 2.93 |
708 | 2191 | 7.802117 | ACATATACAGTACATAGGCCTTGTTT | 58.198 | 34.615 | 12.58 | 5.85 | 0.00 | 2.83 |
709 | 2192 | 7.374975 | ACATATACAGTACATAGGCCTTGTT | 57.625 | 36.000 | 12.58 | 3.06 | 0.00 | 2.83 |
710 | 2193 | 6.996180 | ACATATACAGTACATAGGCCTTGT | 57.004 | 37.500 | 12.58 | 17.57 | 0.00 | 3.16 |
711 | 2194 | 8.123639 | ACTACATATACAGTACATAGGCCTTG | 57.876 | 38.462 | 12.58 | 12.12 | 0.00 | 3.61 |
712 | 2195 | 9.463902 | CTACTACATATACAGTACATAGGCCTT | 57.536 | 37.037 | 12.58 | 0.00 | 0.00 | 4.35 |
713 | 2196 | 7.556996 | GCTACTACATATACAGTACATAGGCCT | 59.443 | 40.741 | 11.78 | 11.78 | 0.00 | 5.19 |
714 | 2197 | 7.201803 | GGCTACTACATATACAGTACATAGGCC | 60.202 | 44.444 | 0.00 | 0.00 | 31.33 | 5.19 |
715 | 2198 | 7.338703 | TGGCTACTACATATACAGTACATAGGC | 59.661 | 40.741 | 0.00 | 13.62 | 34.51 | 3.93 |
716 | 2199 | 8.675504 | GTGGCTACTACATATACAGTACATAGG | 58.324 | 40.741 | 0.00 | 0.00 | 0.00 | 2.57 |
717 | 2200 | 9.451002 | AGTGGCTACTACATATACAGTACATAG | 57.549 | 37.037 | 0.00 | 0.00 | 34.74 | 2.23 |
719 | 2202 | 9.803507 | TTAGTGGCTACTACATATACAGTACAT | 57.196 | 33.333 | 9.78 | 0.00 | 39.06 | 2.29 |
720 | 2203 | 9.631257 | TTTAGTGGCTACTACATATACAGTACA | 57.369 | 33.333 | 9.78 | 0.00 | 39.06 | 2.90 |
737 | 2220 | 8.507249 | GCGATGAAGATAATAAATTTAGTGGCT | 58.493 | 33.333 | 8.37 | 2.94 | 0.00 | 4.75 |
738 | 2221 | 8.289618 | TGCGATGAAGATAATAAATTTAGTGGC | 58.710 | 33.333 | 8.37 | 0.77 | 0.00 | 5.01 |
751 | 2234 | 9.515020 | GGTTTTATGATTTTGCGATGAAGATAA | 57.485 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
752 | 2235 | 7.855409 | CGGTTTTATGATTTTGCGATGAAGATA | 59.145 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
753 | 2236 | 6.692681 | CGGTTTTATGATTTTGCGATGAAGAT | 59.307 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
754 | 2237 | 6.027131 | CGGTTTTATGATTTTGCGATGAAGA | 58.973 | 36.000 | 0.00 | 0.00 | 0.00 | 2.87 |
755 | 2238 | 5.275881 | GCGGTTTTATGATTTTGCGATGAAG | 60.276 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
756 | 2239 | 4.560819 | GCGGTTTTATGATTTTGCGATGAA | 59.439 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
757 | 2240 | 4.101942 | GCGGTTTTATGATTTTGCGATGA | 58.898 | 39.130 | 0.00 | 0.00 | 0.00 | 2.92 |
758 | 2241 | 3.856521 | TGCGGTTTTATGATTTTGCGATG | 59.143 | 39.130 | 0.00 | 0.00 | 0.00 | 3.84 |
759 | 2242 | 4.103365 | TGCGGTTTTATGATTTTGCGAT | 57.897 | 36.364 | 0.00 | 0.00 | 0.00 | 4.58 |
816 | 2299 | 5.617187 | CGCAGTCGTAATAAATCTGAAATGC | 59.383 | 40.000 | 0.00 | 0.00 | 0.00 | 3.56 |
954 | 2442 | 1.617947 | CCTTCTTCCTCCCCGACCTG | 61.618 | 65.000 | 0.00 | 0.00 | 0.00 | 4.00 |
955 | 2443 | 1.306226 | CCTTCTTCCTCCCCGACCT | 60.306 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
1283 | 2771 | 1.828331 | GCTATTAACGGGAAGCGGCG | 61.828 | 60.000 | 0.51 | 0.51 | 0.00 | 6.46 |
1381 | 2881 | 0.251742 | TGAATGGCCAAGGGAAGGTG | 60.252 | 55.000 | 10.96 | 0.00 | 0.00 | 4.00 |
1411 | 2911 | 5.391312 | ACCAGCATCACCAAACTAATTTC | 57.609 | 39.130 | 0.00 | 0.00 | 0.00 | 2.17 |
1468 | 2968 | 2.607187 | CACACACTACCAAGATCGTCC | 58.393 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
1483 | 2983 | 2.281414 | CCCACATCCGTGCACACA | 60.281 | 61.111 | 18.64 | 1.86 | 42.17 | 3.72 |
1636 | 3137 | 4.888239 | AGCTAGTACATGTAAGACACGGAT | 59.112 | 41.667 | 7.25 | 0.00 | 0.00 | 4.18 |
2386 | 3954 | 1.741401 | CGGCGAAGGTGAAGATGCA | 60.741 | 57.895 | 0.00 | 0.00 | 0.00 | 3.96 |
2894 | 4712 | 4.090057 | GCGCTCCTGTTTCCGCAC | 62.090 | 66.667 | 0.00 | 0.00 | 45.21 | 5.34 |
2973 | 4791 | 4.809426 | ACCTACAACTCTGTTCTCAAAACG | 59.191 | 41.667 | 0.00 | 0.00 | 36.96 | 3.60 |
3140 | 6645 | 3.953712 | TTCAGCTCCACGTAGAAATCA | 57.046 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
3290 | 6795 | 1.204941 | ACTCGATCTGTAGGTTGTGCC | 59.795 | 52.381 | 0.00 | 0.00 | 37.58 | 5.01 |
3531 | 7045 | 6.773638 | TGCAACCCATTTTATTATGTTGGTT | 58.226 | 32.000 | 0.00 | 0.00 | 33.22 | 3.67 |
4411 | 8290 | 2.543687 | ATCGACTAGCAACGCACGCT | 62.544 | 55.000 | 0.00 | 0.00 | 43.62 | 5.07 |
4826 | 8763 | 0.391661 | GCTCCAAGATGTCTTCCGCA | 60.392 | 55.000 | 0.00 | 0.00 | 33.11 | 5.69 |
5298 | 9236 | 8.755977 | CCCAAACCACTAAACTTATCTCTACTA | 58.244 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
5299 | 9237 | 7.311109 | CCCCAAACCACTAAACTTATCTCTACT | 60.311 | 40.741 | 0.00 | 0.00 | 0.00 | 2.57 |
5300 | 9238 | 6.822170 | CCCCAAACCACTAAACTTATCTCTAC | 59.178 | 42.308 | 0.00 | 0.00 | 0.00 | 2.59 |
5301 | 9239 | 6.731919 | TCCCCAAACCACTAAACTTATCTCTA | 59.268 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
5302 | 9240 | 5.550403 | TCCCCAAACCACTAAACTTATCTCT | 59.450 | 40.000 | 0.00 | 0.00 | 0.00 | 3.10 |
5303 | 9241 | 5.812286 | TCCCCAAACCACTAAACTTATCTC | 58.188 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
5304 | 9242 | 5.853572 | TCCCCAAACCACTAAACTTATCT | 57.146 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
5305 | 9243 | 6.184789 | TCATCCCCAAACCACTAAACTTATC | 58.815 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
5306 | 9244 | 6.147437 | TCATCCCCAAACCACTAAACTTAT | 57.853 | 37.500 | 0.00 | 0.00 | 0.00 | 1.73 |
5359 | 9297 | 9.950496 | ATGAAAGATGAAACTACAATCACTAGT | 57.050 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
5366 | 9304 | 6.071952 | ACGCCAATGAAAGATGAAACTACAAT | 60.072 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
5457 | 9395 | 1.153369 | CACACCCCTCGCATGGTAG | 60.153 | 63.158 | 0.00 | 0.00 | 32.32 | 3.18 |
5458 | 9396 | 0.980754 | ATCACACCCCTCGCATGGTA | 60.981 | 55.000 | 0.00 | 0.00 | 32.32 | 3.25 |
5548 | 9486 | 2.169352 | GCTAGCAAGATGAACCCTCTGA | 59.831 | 50.000 | 10.63 | 0.00 | 0.00 | 3.27 |
5610 | 9556 | 1.135199 | CCACCACATGATGCAGAAAGC | 60.135 | 52.381 | 0.00 | 0.00 | 45.96 | 3.51 |
5611 | 9557 | 1.135199 | GCCACCACATGATGCAGAAAG | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 2.62 |
5612 | 9558 | 0.889994 | GCCACCACATGATGCAGAAA | 59.110 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
5613 | 9559 | 0.251253 | TGCCACCACATGATGCAGAA | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5614 | 9560 | 0.033894 | ATGCCACCACATGATGCAGA | 60.034 | 50.000 | 0.00 | 0.00 | 35.10 | 4.26 |
5615 | 9561 | 1.682740 | TATGCCACCACATGATGCAG | 58.317 | 50.000 | 0.00 | 0.00 | 35.10 | 4.41 |
5616 | 9562 | 2.140839 | TTATGCCACCACATGATGCA | 57.859 | 45.000 | 0.00 | 0.00 | 36.23 | 3.96 |
5617 | 9563 | 3.738830 | AATTATGCCACCACATGATGC | 57.261 | 42.857 | 0.00 | 0.00 | 0.00 | 3.91 |
5765 | 9721 | 6.149308 | TGCCCTATTTTACATCATCTATTGCG | 59.851 | 38.462 | 0.00 | 0.00 | 0.00 | 4.85 |
5766 | 9722 | 7.452880 | TGCCCTATTTTACATCATCTATTGC | 57.547 | 36.000 | 0.00 | 0.00 | 0.00 | 3.56 |
5799 | 9755 | 1.123077 | TCATCTATTGGAGCGGCTGT | 58.877 | 50.000 | 7.50 | 0.00 | 0.00 | 4.40 |
5845 | 9822 | 1.855513 | TGTTGAAATTGCTGTGCTGC | 58.144 | 45.000 | 0.00 | 0.00 | 0.00 | 5.25 |
5846 | 9823 | 3.644823 | TGATGTTGAAATTGCTGTGCTG | 58.355 | 40.909 | 0.00 | 0.00 | 0.00 | 4.41 |
5847 | 9824 | 4.530710 | ATGATGTTGAAATTGCTGTGCT | 57.469 | 36.364 | 0.00 | 0.00 | 0.00 | 4.40 |
5848 | 9825 | 4.953269 | CAATGATGTTGAAATTGCTGTGC | 58.047 | 39.130 | 0.00 | 0.00 | 0.00 | 4.57 |
5854 | 9831 | 3.429207 | TGCGTGCAATGATGTTGAAATTG | 59.571 | 39.130 | 0.00 | 0.00 | 34.98 | 2.32 |
5855 | 9832 | 3.651206 | TGCGTGCAATGATGTTGAAATT | 58.349 | 36.364 | 0.00 | 0.00 | 0.00 | 1.82 |
5863 | 9840 | 4.352887 | TGTTGATTATGCGTGCAATGATG | 58.647 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
5973 | 11234 | 1.740025 | CAGAATGCGAAGGGAAGAACC | 59.260 | 52.381 | 0.00 | 0.00 | 38.08 | 3.62 |
5993 | 11254 | 4.584743 | ACATGGAAGAGAAGGGTTTTGTTC | 59.415 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
6203 | 11517 | 2.060383 | CATGGAGGAGGAGCCGTCA | 61.060 | 63.158 | 0.00 | 0.00 | 43.43 | 4.35 |
6234 | 11548 | 0.908198 | GCTCCCTGATCACCTCAAGT | 59.092 | 55.000 | 0.00 | 0.00 | 32.14 | 3.16 |
6285 | 11599 | 1.066257 | CTTTGTTGCTGCCGTTGCT | 59.934 | 52.632 | 0.00 | 0.00 | 38.71 | 3.91 |
6288 | 11602 | 1.066257 | CTGCTTTGTTGCTGCCGTT | 59.934 | 52.632 | 0.00 | 0.00 | 0.00 | 4.44 |
6294 | 11608 | 0.031721 | GCTTCTGCTGCTTTGTTGCT | 59.968 | 50.000 | 0.00 | 0.00 | 36.03 | 3.91 |
6346 | 11661 | 2.137528 | TGACCCCGTCACAGCTTCA | 61.138 | 57.895 | 0.00 | 0.00 | 37.67 | 3.02 |
6375 | 11690 | 4.373116 | GTGGTGGCGGCTCGAAGA | 62.373 | 66.667 | 11.43 | 0.00 | 0.00 | 2.87 |
6421 | 11736 | 2.513897 | GGAATGGGAGAACCGCCG | 60.514 | 66.667 | 0.00 | 0.00 | 44.64 | 6.46 |
6422 | 11737 | 2.513897 | CGGAATGGGAGAACCGCC | 60.514 | 66.667 | 0.00 | 0.00 | 44.64 | 6.13 |
6423 | 11738 | 2.513897 | CCGGAATGGGAGAACCGC | 60.514 | 66.667 | 0.00 | 0.00 | 44.64 | 5.68 |
6424 | 11739 | 2.513897 | GCCGGAATGGGAGAACCG | 60.514 | 66.667 | 5.05 | 0.00 | 44.64 | 4.44 |
6425 | 11740 | 2.513897 | CGCCGGAATGGGAGAACC | 60.514 | 66.667 | 5.05 | 0.00 | 38.63 | 3.62 |
6426 | 11741 | 2.513897 | CCGCCGGAATGGGAGAAC | 60.514 | 66.667 | 5.05 | 0.00 | 38.63 | 3.01 |
6427 | 11742 | 4.483243 | GCCGCCGGAATGGGAGAA | 62.483 | 66.667 | 7.68 | 0.00 | 38.63 | 2.87 |
6448 | 11763 | 3.691342 | TCTCCTGCCGTTCCCGTG | 61.691 | 66.667 | 0.00 | 0.00 | 0.00 | 4.94 |
6499 | 12153 | 4.320456 | CCCACAGCCGACACTGCT | 62.320 | 66.667 | 0.00 | 0.00 | 41.60 | 4.24 |
6506 | 12160 | 3.716195 | CATGGACCCCACAGCCGA | 61.716 | 66.667 | 0.00 | 0.00 | 35.80 | 5.54 |
6511 | 12165 | 2.094494 | AAACCCCATGGACCCCACA | 61.094 | 57.895 | 15.22 | 0.00 | 35.80 | 4.17 |
6565 | 12219 | 2.668212 | CGCTGAAACTTCCCGCCA | 60.668 | 61.111 | 0.00 | 0.00 | 0.00 | 5.69 |
6568 | 12222 | 2.966309 | GCCACGCTGAAACTTCCCG | 61.966 | 63.158 | 0.00 | 0.00 | 0.00 | 5.14 |
6583 | 12237 | 4.912395 | GCACACCCCCAACTGCCA | 62.912 | 66.667 | 0.00 | 0.00 | 0.00 | 4.92 |
6609 | 12263 | 0.304705 | CGCCCTAGCAAAACATAGCG | 59.695 | 55.000 | 0.00 | 0.00 | 39.83 | 4.26 |
6616 | 12270 | 4.715523 | AGCCGCGCCCTAGCAAAA | 62.716 | 61.111 | 0.00 | 0.00 | 39.83 | 2.44 |
6627 | 12281 | 2.546645 | AATTTGCATCACCAGCCGCG | 62.547 | 55.000 | 0.00 | 0.00 | 0.00 | 6.46 |
6694 | 12348 | 7.458409 | ACAGATGATGTAGATGCAAGTTTTT | 57.542 | 32.000 | 0.00 | 0.00 | 41.60 | 1.94 |
6695 | 12349 | 7.310664 | CAACAGATGATGTAGATGCAAGTTTT | 58.689 | 34.615 | 0.00 | 0.00 | 43.00 | 2.43 |
6696 | 12350 | 6.127814 | CCAACAGATGATGTAGATGCAAGTTT | 60.128 | 38.462 | 0.00 | 0.00 | 43.00 | 2.66 |
6697 | 12351 | 5.356190 | CCAACAGATGATGTAGATGCAAGTT | 59.644 | 40.000 | 0.00 | 0.00 | 43.00 | 2.66 |
6698 | 12352 | 4.880120 | CCAACAGATGATGTAGATGCAAGT | 59.120 | 41.667 | 0.00 | 0.00 | 43.00 | 3.16 |
6699 | 12353 | 5.121105 | TCCAACAGATGATGTAGATGCAAG | 58.879 | 41.667 | 0.00 | 0.00 | 43.00 | 4.01 |
6733 | 12387 | 3.564225 | CGAATTTACATCACTAAGGCCCC | 59.436 | 47.826 | 0.00 | 0.00 | 0.00 | 5.80 |
6745 | 12399 | 9.763465 | CAGACGTAAAAATAACCGAATTTACAT | 57.237 | 29.630 | 0.00 | 0.00 | 37.85 | 2.29 |
6797 | 12452 | 0.174845 | TGCATCGTACTACAGGCCAC | 59.825 | 55.000 | 5.01 | 0.00 | 0.00 | 5.01 |
6836 | 12491 | 1.677576 | CTTCAGTTGCTGGCAAGACAA | 59.322 | 47.619 | 8.34 | 0.00 | 36.52 | 3.18 |
6893 | 12548 | 4.500887 | GGGTAGCTTGGTTCCAAAAAGAAC | 60.501 | 45.833 | 5.76 | 0.00 | 44.45 | 3.01 |
6896 | 12551 | 2.299013 | GGGGTAGCTTGGTTCCAAAAAG | 59.701 | 50.000 | 5.76 | 0.00 | 0.00 | 2.27 |
6908 | 12563 | 3.756082 | TGATGGAAAATGGGGTAGCTT | 57.244 | 42.857 | 0.00 | 0.00 | 0.00 | 3.74 |
6974 | 12629 | 2.094126 | GATGCATCGAAACCGCTCCG | 62.094 | 60.000 | 11.68 | 0.00 | 0.00 | 4.63 |
6985 | 12640 | 1.266175 | GGCTTTCCTGATGATGCATCG | 59.734 | 52.381 | 21.34 | 7.17 | 43.14 | 3.84 |
7016 | 12671 | 0.888619 | TAACCTGTGTCCGAGCAGAG | 59.111 | 55.000 | 0.00 | 0.00 | 34.87 | 3.35 |
7017 | 12672 | 1.557099 | ATAACCTGTGTCCGAGCAGA | 58.443 | 50.000 | 0.00 | 0.00 | 34.87 | 4.26 |
7018 | 12673 | 2.223829 | CCTATAACCTGTGTCCGAGCAG | 60.224 | 54.545 | 0.00 | 0.00 | 0.00 | 4.24 |
7019 | 12674 | 1.754803 | CCTATAACCTGTGTCCGAGCA | 59.245 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
7106 | 12761 | 9.846248 | CTAGTAAACAAAGCATAGCAGAAAAAT | 57.154 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
7174 | 12829 | 5.809001 | ACTGTCCTCTCATTAATGCAAGAA | 58.191 | 37.500 | 10.76 | 0.00 | 0.00 | 2.52 |
7183 | 12838 | 9.183368 | CATAGCTATCATACTGTCCTCTCATTA | 57.817 | 37.037 | 2.34 | 0.00 | 0.00 | 1.90 |
7185 | 12840 | 7.122501 | CACATAGCTATCATACTGTCCTCTCAT | 59.877 | 40.741 | 2.34 | 0.00 | 0.00 | 2.90 |
7189 | 12844 | 6.825944 | TCACATAGCTATCATACTGTCCTC | 57.174 | 41.667 | 2.34 | 0.00 | 0.00 | 3.71 |
7196 | 12851 | 7.274468 | CGAACAGGAATCACATAGCTATCATAC | 59.726 | 40.741 | 2.34 | 0.00 | 0.00 | 2.39 |
7226 | 12881 | 6.289064 | ACCTGTTTCCTAGTGAACACTTTAG | 58.711 | 40.000 | 12.66 | 5.43 | 42.54 | 1.85 |
7377 | 13032 | 2.711547 | ACTGTCTCCACCCTAGCTTTTT | 59.288 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
7378 | 13033 | 2.339769 | ACTGTCTCCACCCTAGCTTTT | 58.660 | 47.619 | 0.00 | 0.00 | 0.00 | 2.27 |
7379 | 13034 | 2.031495 | ACTGTCTCCACCCTAGCTTT | 57.969 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
7514 | 14302 | 7.988599 | ACTTACAAGGTACAAGTATCAACACAA | 59.011 | 33.333 | 0.00 | 0.00 | 30.89 | 3.33 |
7515 | 14303 | 7.502696 | ACTTACAAGGTACAAGTATCAACACA | 58.497 | 34.615 | 0.00 | 0.00 | 30.89 | 3.72 |
7528 | 14316 | 6.896883 | AGGGGATATTGAACTTACAAGGTAC | 58.103 | 40.000 | 0.00 | 0.00 | 33.22 | 3.34 |
7609 | 14397 | 4.700213 | GCCAGAGGTAAAGCAGAACAAATA | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
7677 | 14465 | 8.282455 | CTCAGTTAGAGGTCATAGAAGTAACA | 57.718 | 38.462 | 0.00 | 0.00 | 40.84 | 2.41 |
7711 | 14499 | 4.631813 | AGCAAACAATCCTCGACTTCATAC | 59.368 | 41.667 | 0.00 | 0.00 | 0.00 | 2.39 |
7748 | 14536 | 7.301054 | CACTAAAACCAGATAAACAAGAGCAG | 58.699 | 38.462 | 0.00 | 0.00 | 0.00 | 4.24 |
8097 | 14924 | 2.699846 | ACTGAGCAAAAAGGGATGCAAA | 59.300 | 40.909 | 0.00 | 0.00 | 44.95 | 3.68 |
8098 | 14925 | 2.318908 | ACTGAGCAAAAAGGGATGCAA | 58.681 | 42.857 | 0.00 | 0.00 | 44.95 | 4.08 |
8099 | 14926 | 1.999648 | ACTGAGCAAAAAGGGATGCA | 58.000 | 45.000 | 0.00 | 0.00 | 44.95 | 3.96 |
8100 | 14927 | 4.725790 | ATAACTGAGCAAAAAGGGATGC | 57.274 | 40.909 | 0.00 | 0.00 | 42.87 | 3.91 |
8102 | 14929 | 8.636213 | CAATCATATAACTGAGCAAAAAGGGAT | 58.364 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
8103 | 14930 | 7.416664 | GCAATCATATAACTGAGCAAAAAGGGA | 60.417 | 37.037 | 0.00 | 0.00 | 0.00 | 4.20 |
8104 | 14931 | 6.698766 | GCAATCATATAACTGAGCAAAAAGGG | 59.301 | 38.462 | 0.00 | 0.00 | 0.00 | 3.95 |
8105 | 14932 | 6.698766 | GGCAATCATATAACTGAGCAAAAAGG | 59.301 | 38.462 | 0.00 | 0.00 | 0.00 | 3.11 |
8106 | 14933 | 7.434307 | CAGGCAATCATATAACTGAGCAAAAAG | 59.566 | 37.037 | 0.00 | 0.00 | 0.00 | 2.27 |
8650 | 15479 | 9.017509 | AGCAAAATGAGAGAATCAACAAATCTA | 57.982 | 29.630 | 0.00 | 0.00 | 42.53 | 1.98 |
8761 | 15631 | 2.975732 | TGCTCAGATCCTGCTGTAAG | 57.024 | 50.000 | 0.00 | 0.00 | 37.20 | 2.34 |
8768 | 15638 | 5.221481 | ACAGTGAGATATTGCTCAGATCCTG | 60.221 | 44.000 | 0.00 | 0.00 | 44.92 | 3.86 |
8803 | 15673 | 2.135933 | CAGTTCTCCAACACGGTTCTC | 58.864 | 52.381 | 0.00 | 0.00 | 34.60 | 2.87 |
8814 | 15698 | 8.264347 | TCATAATACATTACAAGCAGTTCTCCA | 58.736 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
8850 | 15739 | 3.780804 | TGGCCTGCTTGTACTTTTCTA | 57.219 | 42.857 | 3.32 | 0.00 | 0.00 | 2.10 |
8851 | 15740 | 2.656947 | TGGCCTGCTTGTACTTTTCT | 57.343 | 45.000 | 3.32 | 0.00 | 0.00 | 2.52 |
8852 | 15741 | 2.884639 | TCTTGGCCTGCTTGTACTTTTC | 59.115 | 45.455 | 3.32 | 0.00 | 0.00 | 2.29 |
8853 | 15742 | 2.944129 | TCTTGGCCTGCTTGTACTTTT | 58.056 | 42.857 | 3.32 | 0.00 | 0.00 | 2.27 |
8987 | 15877 | 2.542824 | GGTTCGAACACACACCAATTGG | 60.543 | 50.000 | 28.24 | 23.31 | 42.17 | 3.16 |
9008 | 15981 | 6.403333 | TTTAATACTGTTGCGTCAGCTTAG | 57.597 | 37.500 | 7.68 | 0.00 | 45.42 | 2.18 |
9041 | 16014 | 9.653287 | TTTCTCGAGCTATGGGTTATATATTTG | 57.347 | 33.333 | 7.81 | 0.00 | 0.00 | 2.32 |
9124 | 16097 | 3.317711 | ACAAATCAAATCGTGAAGTGCCA | 59.682 | 39.130 | 0.00 | 0.00 | 40.50 | 4.92 |
9133 | 16106 | 9.150348 | AGAAAGAAAAACAACAAATCAAATCGT | 57.850 | 25.926 | 0.00 | 0.00 | 0.00 | 3.73 |
9134 | 16107 | 9.971744 | AAGAAAGAAAAACAACAAATCAAATCG | 57.028 | 25.926 | 0.00 | 0.00 | 0.00 | 3.34 |
9137 | 16110 | 9.875675 | CACAAGAAAGAAAAACAACAAATCAAA | 57.124 | 25.926 | 0.00 | 0.00 | 0.00 | 2.69 |
9140 | 16113 | 7.742151 | AGCACAAGAAAGAAAAACAACAAATC | 58.258 | 30.769 | 0.00 | 0.00 | 0.00 | 2.17 |
9141 | 16114 | 7.671495 | AGCACAAGAAAGAAAAACAACAAAT | 57.329 | 28.000 | 0.00 | 0.00 | 0.00 | 2.32 |
9145 | 16118 | 7.831562 | GTGATAGCACAAGAAAGAAAAACAAC | 58.168 | 34.615 | 6.17 | 0.00 | 44.51 | 3.32 |
9162 | 16273 | 7.230712 | TCAGGTCTTAATAATCGAGTGATAGCA | 59.769 | 37.037 | 0.00 | 0.00 | 33.40 | 3.49 |
9168 | 16279 | 7.495934 | ACCAATTCAGGTCTTAATAATCGAGTG | 59.504 | 37.037 | 0.00 | 0.00 | 37.28 | 3.51 |
9191 | 16302 | 4.447138 | ACTGAAACCTACCATTTCACCA | 57.553 | 40.909 | 0.00 | 0.00 | 40.32 | 4.17 |
9233 | 16344 | 9.698309 | CATTTTGTTACGGAGAGAGTATATGAT | 57.302 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
9234 | 16345 | 8.692710 | ACATTTTGTTACGGAGAGAGTATATGA | 58.307 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
9235 | 16346 | 8.873215 | ACATTTTGTTACGGAGAGAGTATATG | 57.127 | 34.615 | 0.00 | 0.00 | 0.00 | 1.78 |
9237 | 16348 | 9.961265 | CATACATTTTGTTACGGAGAGAGTATA | 57.039 | 33.333 | 0.00 | 0.00 | 0.00 | 1.47 |
9238 | 16349 | 8.692710 | TCATACATTTTGTTACGGAGAGAGTAT | 58.307 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
9239 | 16350 | 7.972277 | GTCATACATTTTGTTACGGAGAGAGTA | 59.028 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
9240 | 16351 | 6.812160 | GTCATACATTTTGTTACGGAGAGAGT | 59.188 | 38.462 | 0.00 | 0.00 | 0.00 | 3.24 |
9241 | 16352 | 6.020599 | CGTCATACATTTTGTTACGGAGAGAG | 60.021 | 42.308 | 0.00 | 0.00 | 31.05 | 3.20 |
9242 | 16353 | 5.803461 | CGTCATACATTTTGTTACGGAGAGA | 59.197 | 40.000 | 0.00 | 0.00 | 31.05 | 3.10 |
9245 | 16356 | 5.773239 | ACGTCATACATTTTGTTACGGAG | 57.227 | 39.130 | 0.00 | 0.00 | 35.53 | 4.63 |
9246 | 16357 | 6.542574 | AAACGTCATACATTTTGTTACGGA | 57.457 | 33.333 | 0.00 | 0.00 | 35.53 | 4.69 |
9247 | 16358 | 7.611821 | AAAAACGTCATACATTTTGTTACGG | 57.388 | 32.000 | 0.00 | 0.00 | 35.53 | 4.02 |
9325 | 16437 | 4.090786 | ACACGCAGTAAAAAGTGCAAAAAC | 59.909 | 37.500 | 6.07 | 0.00 | 41.61 | 2.43 |
9327 | 16439 | 3.839293 | ACACGCAGTAAAAAGTGCAAAA | 58.161 | 36.364 | 6.07 | 0.00 | 41.61 | 2.44 |
9341 | 16453 | 1.569493 | CCCACTTCGAAACACGCAG | 59.431 | 57.895 | 0.00 | 0.00 | 40.71 | 5.18 |
9342 | 16454 | 1.890041 | CCCCACTTCGAAACACGCA | 60.890 | 57.895 | 0.00 | 0.00 | 42.26 | 5.24 |
9361 | 16473 | 3.264845 | GTGACCCCCACCCCACAT | 61.265 | 66.667 | 0.00 | 0.00 | 39.86 | 3.21 |
9367 | 16479 | 1.744798 | GCTAATTACGTGACCCCCACC | 60.745 | 57.143 | 0.00 | 0.00 | 42.76 | 4.61 |
9368 | 16480 | 1.065998 | TGCTAATTACGTGACCCCCAC | 60.066 | 52.381 | 0.00 | 0.00 | 42.30 | 4.61 |
9369 | 16481 | 1.277579 | TGCTAATTACGTGACCCCCA | 58.722 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
9370 | 16482 | 2.406596 | TTGCTAATTACGTGACCCCC | 57.593 | 50.000 | 0.00 | 0.00 | 0.00 | 5.40 |
9371 | 16483 | 3.502979 | TGTTTTGCTAATTACGTGACCCC | 59.497 | 43.478 | 0.00 | 0.00 | 0.00 | 4.95 |
9401 | 16513 | 4.819761 | TGCACCATCGCCGCTCTC | 62.820 | 66.667 | 0.00 | 0.00 | 0.00 | 3.20 |
9410 | 16522 | 3.127533 | GAGCCCGTGTGCACCATC | 61.128 | 66.667 | 15.69 | 4.05 | 0.00 | 3.51 |
9433 | 16545 | 2.271800 | GATTGGGACACTTAGCGTGAG | 58.728 | 52.381 | 0.00 | 0.00 | 46.81 | 3.51 |
9434 | 16546 | 1.403647 | CGATTGGGACACTTAGCGTGA | 60.404 | 52.381 | 0.00 | 0.00 | 46.81 | 4.35 |
9436 | 16548 | 0.892755 | TCGATTGGGACACTTAGCGT | 59.107 | 50.000 | 0.00 | 0.00 | 39.29 | 5.07 |
9437 | 16549 | 1.659098 | GTTCGATTGGGACACTTAGCG | 59.341 | 52.381 | 0.00 | 0.00 | 39.29 | 4.26 |
9438 | 16550 | 2.415512 | GTGTTCGATTGGGACACTTAGC | 59.584 | 50.000 | 9.53 | 0.00 | 39.29 | 3.09 |
9443 | 16555 | 1.156736 | CCAGTGTTCGATTGGGACAC | 58.843 | 55.000 | 8.89 | 8.89 | 42.95 | 3.67 |
9444 | 16556 | 0.605319 | GCCAGTGTTCGATTGGGACA | 60.605 | 55.000 | 7.57 | 0.00 | 32.53 | 4.02 |
9445 | 16557 | 1.635663 | CGCCAGTGTTCGATTGGGAC | 61.636 | 60.000 | 7.57 | 0.00 | 32.53 | 4.46 |
9446 | 16558 | 1.375396 | CGCCAGTGTTCGATTGGGA | 60.375 | 57.895 | 7.57 | 0.00 | 32.53 | 4.37 |
9447 | 16559 | 1.361668 | CTCGCCAGTGTTCGATTGGG | 61.362 | 60.000 | 5.39 | 0.00 | 33.98 | 4.12 |
9448 | 16560 | 0.670546 | ACTCGCCAGTGTTCGATTGG | 60.671 | 55.000 | 5.39 | 0.00 | 33.98 | 3.16 |
9449 | 16561 | 0.439985 | CACTCGCCAGTGTTCGATTG | 59.560 | 55.000 | 2.94 | 6.59 | 44.63 | 2.67 |
9450 | 16562 | 2.827604 | CACTCGCCAGTGTTCGATT | 58.172 | 52.632 | 2.94 | 0.00 | 44.63 | 3.34 |
9451 | 16563 | 4.578913 | CACTCGCCAGTGTTCGAT | 57.421 | 55.556 | 2.94 | 0.00 | 44.63 | 3.59 |
9458 | 16570 | 4.003788 | CCGGTTCCACTCGCCAGT | 62.004 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
9459 | 16571 | 4.760047 | CCCGGTTCCACTCGCCAG | 62.760 | 72.222 | 0.00 | 0.00 | 0.00 | 4.85 |
9462 | 16574 | 4.778143 | ATGCCCGGTTCCACTCGC | 62.778 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
9463 | 16575 | 2.046314 | AATGCCCGGTTCCACTCG | 60.046 | 61.111 | 0.00 | 0.00 | 0.00 | 4.18 |
9464 | 16576 | 0.608035 | TTGAATGCCCGGTTCCACTC | 60.608 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
9465 | 16577 | 0.039618 | ATTGAATGCCCGGTTCCACT | 59.960 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
9466 | 16578 | 0.173255 | CATTGAATGCCCGGTTCCAC | 59.827 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
9467 | 16579 | 2.577490 | CATTGAATGCCCGGTTCCA | 58.423 | 52.632 | 0.00 | 0.00 | 0.00 | 3.53 |
9477 | 16589 | 1.439353 | CCCTCCGACCGCATTGAATG | 61.439 | 60.000 | 0.00 | 0.00 | 0.00 | 2.67 |
9478 | 16590 | 1.153168 | CCCTCCGACCGCATTGAAT | 60.153 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
9479 | 16591 | 2.267642 | CCCTCCGACCGCATTGAA | 59.732 | 61.111 | 0.00 | 0.00 | 0.00 | 2.69 |
9480 | 16592 | 4.467084 | GCCCTCCGACCGCATTGA | 62.467 | 66.667 | 0.00 | 0.00 | 0.00 | 2.57 |
9487 | 16599 | 3.948719 | TGTGTTGGCCCTCCGACC | 61.949 | 66.667 | 0.00 | 0.00 | 44.67 | 4.79 |
9488 | 16600 | 2.668550 | GTGTGTTGGCCCTCCGAC | 60.669 | 66.667 | 0.00 | 0.00 | 45.36 | 4.79 |
9489 | 16601 | 2.525124 | ATGTGTGTTGGCCCTCCGA | 61.525 | 57.895 | 0.00 | 0.00 | 34.14 | 4.55 |
9490 | 16602 | 2.034066 | ATGTGTGTTGGCCCTCCG | 59.966 | 61.111 | 0.00 | 0.00 | 34.14 | 4.63 |
9491 | 16603 | 0.037590 | TACATGTGTGTTGGCCCTCC | 59.962 | 55.000 | 9.11 | 0.00 | 39.77 | 4.30 |
9492 | 16604 | 1.165270 | GTACATGTGTGTTGGCCCTC | 58.835 | 55.000 | 9.11 | 0.00 | 39.77 | 4.30 |
9493 | 16605 | 0.605319 | CGTACATGTGTGTTGGCCCT | 60.605 | 55.000 | 9.11 | 0.00 | 39.77 | 5.19 |
9494 | 16606 | 0.887387 | ACGTACATGTGTGTTGGCCC | 60.887 | 55.000 | 9.11 | 0.00 | 39.77 | 5.80 |
9495 | 16607 | 1.798283 | TACGTACATGTGTGTTGGCC | 58.202 | 50.000 | 9.11 | 0.00 | 39.77 | 5.36 |
9496 | 16608 | 2.095213 | CCATACGTACATGTGTGTTGGC | 59.905 | 50.000 | 9.11 | 0.00 | 39.77 | 4.52 |
9497 | 16609 | 3.124466 | CACCATACGTACATGTGTGTTGG | 59.876 | 47.826 | 9.11 | 16.57 | 39.77 | 3.77 |
9498 | 16610 | 3.124466 | CCACCATACGTACATGTGTGTTG | 59.876 | 47.826 | 9.11 | 7.75 | 39.77 | 3.33 |
9499 | 16611 | 3.007074 | TCCACCATACGTACATGTGTGTT | 59.993 | 43.478 | 9.11 | 0.00 | 39.77 | 3.32 |
9500 | 16612 | 2.563620 | TCCACCATACGTACATGTGTGT | 59.436 | 45.455 | 9.11 | 9.27 | 42.39 | 3.72 |
9501 | 16613 | 3.239587 | TCCACCATACGTACATGTGTG | 57.760 | 47.619 | 9.11 | 5.93 | 31.93 | 3.82 |
9502 | 16614 | 3.007074 | TGTTCCACCATACGTACATGTGT | 59.993 | 43.478 | 9.11 | 0.73 | 0.00 | 3.72 |
9503 | 16615 | 3.591023 | TGTTCCACCATACGTACATGTG | 58.409 | 45.455 | 9.11 | 5.72 | 0.00 | 3.21 |
9504 | 16616 | 3.369052 | CCTGTTCCACCATACGTACATGT | 60.369 | 47.826 | 2.69 | 2.69 | 0.00 | 3.21 |
9505 | 16617 | 3.118920 | TCCTGTTCCACCATACGTACATG | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 3.21 |
9506 | 16618 | 3.101437 | TCCTGTTCCACCATACGTACAT | 58.899 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
9507 | 16619 | 2.494471 | CTCCTGTTCCACCATACGTACA | 59.506 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
9508 | 16620 | 2.494870 | ACTCCTGTTCCACCATACGTAC | 59.505 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
9509 | 16621 | 2.811410 | ACTCCTGTTCCACCATACGTA | 58.189 | 47.619 | 0.00 | 0.00 | 0.00 | 3.57 |
9510 | 16622 | 1.640917 | ACTCCTGTTCCACCATACGT | 58.359 | 50.000 | 0.00 | 0.00 | 0.00 | 3.57 |
9511 | 16623 | 4.556104 | CGTATACTCCTGTTCCACCATACG | 60.556 | 50.000 | 0.56 | 0.00 | 35.57 | 3.06 |
9512 | 16624 | 4.261909 | CCGTATACTCCTGTTCCACCATAC | 60.262 | 50.000 | 0.56 | 0.00 | 0.00 | 2.39 |
9513 | 16625 | 3.893200 | CCGTATACTCCTGTTCCACCATA | 59.107 | 47.826 | 0.56 | 0.00 | 0.00 | 2.74 |
9514 | 16626 | 2.698797 | CCGTATACTCCTGTTCCACCAT | 59.301 | 50.000 | 0.56 | 0.00 | 0.00 | 3.55 |
9515 | 16627 | 2.104967 | CCGTATACTCCTGTTCCACCA | 58.895 | 52.381 | 0.56 | 0.00 | 0.00 | 4.17 |
9516 | 16628 | 2.105766 | ACCGTATACTCCTGTTCCACC | 58.894 | 52.381 | 0.56 | 0.00 | 0.00 | 4.61 |
9517 | 16629 | 2.737679 | GCACCGTATACTCCTGTTCCAC | 60.738 | 54.545 | 0.56 | 0.00 | 0.00 | 4.02 |
9518 | 16630 | 1.479323 | GCACCGTATACTCCTGTTCCA | 59.521 | 52.381 | 0.56 | 0.00 | 0.00 | 3.53 |
9519 | 16631 | 1.535437 | CGCACCGTATACTCCTGTTCC | 60.535 | 57.143 | 0.56 | 0.00 | 0.00 | 3.62 |
9520 | 16632 | 1.836383 | CGCACCGTATACTCCTGTTC | 58.164 | 55.000 | 0.56 | 0.00 | 0.00 | 3.18 |
9521 | 16633 | 0.179119 | GCGCACCGTATACTCCTGTT | 60.179 | 55.000 | 0.30 | 0.00 | 0.00 | 3.16 |
9522 | 16634 | 1.035932 | AGCGCACCGTATACTCCTGT | 61.036 | 55.000 | 11.47 | 0.00 | 0.00 | 4.00 |
9523 | 16635 | 0.317938 | GAGCGCACCGTATACTCCTG | 60.318 | 60.000 | 11.47 | 0.00 | 0.00 | 3.86 |
9524 | 16636 | 1.783031 | CGAGCGCACCGTATACTCCT | 61.783 | 60.000 | 11.47 | 0.00 | 0.00 | 3.69 |
9525 | 16637 | 1.370172 | CGAGCGCACCGTATACTCC | 60.370 | 63.158 | 11.47 | 0.00 | 0.00 | 3.85 |
9526 | 16638 | 2.009755 | GCGAGCGCACCGTATACTC | 61.010 | 63.158 | 20.23 | 1.15 | 41.49 | 2.59 |
9527 | 16639 | 2.025727 | GCGAGCGCACCGTATACT | 59.974 | 61.111 | 20.23 | 0.00 | 41.49 | 2.12 |
9528 | 16640 | 3.028590 | GGCGAGCGCACCGTATAC | 61.029 | 66.667 | 20.23 | 6.56 | 44.11 | 1.47 |
9529 | 16641 | 4.617486 | CGGCGAGCGCACCGTATA | 62.617 | 66.667 | 23.34 | 0.00 | 44.46 | 1.47 |
9538 | 16650 | 2.486636 | TTATATCTGCCCGGCGAGCG | 62.487 | 60.000 | 9.30 | 3.32 | 0.00 | 5.03 |
9539 | 16651 | 0.737715 | CTTATATCTGCCCGGCGAGC | 60.738 | 60.000 | 9.30 | 7.77 | 0.00 | 5.03 |
9540 | 16652 | 0.108615 | CCTTATATCTGCCCGGCGAG | 60.109 | 60.000 | 9.30 | 0.00 | 0.00 | 5.03 |
9541 | 16653 | 0.541063 | TCCTTATATCTGCCCGGCGA | 60.541 | 55.000 | 9.30 | 5.67 | 0.00 | 5.54 |
9542 | 16654 | 0.537188 | ATCCTTATATCTGCCCGGCG | 59.463 | 55.000 | 4.58 | 0.00 | 0.00 | 6.46 |
9543 | 16655 | 1.134371 | GGATCCTTATATCTGCCCGGC | 60.134 | 57.143 | 3.84 | 1.04 | 0.00 | 6.13 |
9544 | 16656 | 1.486726 | GGGATCCTTATATCTGCCCGG | 59.513 | 57.143 | 12.58 | 0.00 | 0.00 | 5.73 |
9545 | 16657 | 2.990066 | GGGATCCTTATATCTGCCCG | 57.010 | 55.000 | 12.58 | 0.00 | 0.00 | 6.13 |
9546 | 16658 | 2.168728 | GACGGGATCCTTATATCTGCCC | 59.831 | 54.545 | 12.58 | 0.00 | 0.00 | 5.36 |
9547 | 16659 | 2.832129 | TGACGGGATCCTTATATCTGCC | 59.168 | 50.000 | 12.58 | 0.00 | 0.00 | 4.85 |
9548 | 16660 | 3.673594 | CGTGACGGGATCCTTATATCTGC | 60.674 | 52.174 | 12.58 | 0.00 | 0.00 | 4.26 |
9549 | 16661 | 3.119459 | CCGTGACGGGATCCTTATATCTG | 60.119 | 52.174 | 17.80 | 0.00 | 44.15 | 2.90 |
9550 | 16662 | 3.090037 | CCGTGACGGGATCCTTATATCT | 58.910 | 50.000 | 17.80 | 0.00 | 44.15 | 1.98 |
9551 | 16663 | 3.505464 | CCGTGACGGGATCCTTATATC | 57.495 | 52.381 | 17.80 | 3.25 | 44.15 | 1.63 |
9564 | 16676 | 2.048597 | TAGCAACCTGCCGTGACG | 60.049 | 61.111 | 0.00 | 0.00 | 46.52 | 4.35 |
9565 | 16677 | 2.033194 | GGTAGCAACCTGCCGTGAC | 61.033 | 63.158 | 0.00 | 0.00 | 46.52 | 3.67 |
9566 | 16678 | 2.345991 | GGTAGCAACCTGCCGTGA | 59.654 | 61.111 | 0.00 | 0.00 | 46.52 | 4.35 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.