Multiple sequence alignment - TraesCS3B01G323800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G323800 chr3B 100.000 4229 0 0 1 4229 524324411 524328639 0.000000e+00 7810
1 TraesCS3B01G323800 chr3B 97.516 161 4 0 1723 1883 243784045 243784205 4.170000e-70 276
2 TraesCS3B01G323800 chr3B 93.642 173 10 1 1711 1883 413420574 413420745 1.510000e-64 257
3 TraesCS3B01G323800 chr3B 91.209 182 14 2 1704 1883 684728394 684728213 3.270000e-61 246
4 TraesCS3B01G323800 chr3A 95.317 1687 30 3 1882 3552 517491879 517493532 0.000000e+00 2632
5 TraesCS3B01G323800 chr3A 91.053 1140 58 11 622 1724 517490748 517491880 0.000000e+00 1500
6 TraesCS3B01G323800 chr3A 91.374 626 40 12 3604 4229 517493532 517494143 0.000000e+00 845
7 TraesCS3B01G323800 chr3A 89.560 182 8 5 407 577 517490566 517490747 1.980000e-53 220
8 TraesCS3B01G323800 chr3D 94.314 1495 51 11 1883 3371 398300624 398302090 0.000000e+00 2259
9 TraesCS3B01G323800 chr3D 88.130 1171 92 20 180 1307 398298681 398299847 0.000000e+00 1349
10 TraesCS3B01G323800 chr3D 90.644 481 28 11 3734 4211 398302126 398302592 1.290000e-174 623
11 TraesCS3B01G323800 chr3D 94.402 393 12 1 1342 1724 398300226 398300618 2.810000e-166 595
12 TraesCS3B01G323800 chr3D 76.600 547 105 18 186 714 266666912 266666371 3.220000e-71 279
13 TraesCS3B01G323800 chr5B 96.000 200 8 0 1 200 536606627 536606428 4.080000e-85 326
14 TraesCS3B01G323800 chr5B 95.783 166 6 1 1723 1887 474318506 474318341 2.510000e-67 267
15 TraesCS3B01G323800 chr5B 75.893 448 80 21 186 611 652626166 652625725 1.990000e-48 204
16 TraesCS3B01G323800 chr5B 81.443 194 35 1 1115 1308 704878541 704878733 1.570000e-34 158
17 TraesCS3B01G323800 chr1B 97.872 188 4 0 1 188 50382855 50383042 4.080000e-85 326
18 TraesCS3B01G323800 chr1B 94.231 208 9 3 1 206 259472774 259472568 8.830000e-82 315
19 TraesCS3B01G323800 chr1B 96.319 163 6 0 1721 1883 543806105 543805943 6.970000e-68 268
20 TraesCS3B01G323800 chr1B 95.122 164 8 0 1720 1883 637500083 637500246 4.190000e-65 259
21 TraesCS3B01G323800 chr1B 82.383 193 30 4 1118 1308 595176890 595177080 9.410000e-37 165
22 TraesCS3B01G323800 chr7B 95.939 197 8 0 1 197 373665889 373665693 1.900000e-83 320
23 TraesCS3B01G323800 chr7B 96.319 163 6 0 1721 1883 424980077 424979915 6.970000e-68 268
24 TraesCS3B01G323800 chr4B 95.960 198 7 1 1 197 113677155 113677352 1.900000e-83 320
25 TraesCS3B01G323800 chr4B 94.578 166 9 0 1718 1883 352835394 352835559 1.510000e-64 257
26 TraesCS3B01G323800 chr2B 95.500 200 8 1 1 200 622200372 622200570 6.820000e-83 318
27 TraesCS3B01G323800 chr2B 94.686 207 6 4 1 207 83846645 83846444 2.450000e-82 316
28 TraesCS3B01G323800 chr2B 94.686 207 6 4 1 207 83887922 83887721 2.450000e-82 316
29 TraesCS3B01G323800 chr2B 94.203 207 7 4 1 207 83914572 83914371 1.140000e-80 311
30 TraesCS3B01G323800 chr1D 77.425 567 102 16 180 725 435269781 435270342 8.830000e-82 315
31 TraesCS3B01G323800 chr1D 81.865 193 31 4 1118 1308 439022278 439022468 4.380000e-35 159
32 TraesCS3B01G323800 chr6D 77.003 574 99 27 180 730 289519919 289520482 8.890000e-77 298
33 TraesCS3B01G323800 chr6D 91.803 183 10 4 1703 1883 406204716 406204895 2.520000e-62 250
34 TraesCS3B01G323800 chr1A 78.936 451 79 10 191 627 361213524 361213076 4.140000e-75 292
35 TraesCS3B01G323800 chr1A 82.383 193 30 4 1118 1308 535312152 535312342 9.410000e-37 165
36 TraesCS3B01G323800 chr1A 74.194 434 90 13 186 605 12761505 12761080 1.220000e-35 161
37 TraesCS3B01G323800 chr1A 77.914 163 35 1 295 457 556092922 556092761 2.690000e-17 100
38 TraesCS3B01G323800 chrUn 81.337 359 55 9 261 607 81277772 81277414 8.950000e-72 281
39 TraesCS3B01G323800 chr7A 78.947 399 72 11 186 576 429469960 429469566 1.170000e-65 261
40 TraesCS3B01G323800 chr6B 76.430 437 74 20 180 594 450635430 450635859 4.280000e-50 209
41 TraesCS3B01G323800 chr2D 75.636 472 82 21 186 638 645015485 645015942 1.990000e-48 204
42 TraesCS3B01G323800 chr2D 80.000 185 37 0 1125 1309 94319386 94319202 2.050000e-28 137
43 TraesCS3B01G323800 chr4A 83.505 194 31 1 1115 1308 610490453 610490261 3.360000e-41 180
44 TraesCS3B01G323800 chr5D 81.443 194 35 1 1115 1308 558247762 558247570 1.570000e-34 158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G323800 chr3B 524324411 524328639 4228 False 7810.00 7810 100.0000 1 4229 1 chr3B.!!$F3 4228
1 TraesCS3B01G323800 chr3A 517490566 517494143 3577 False 1299.25 2632 91.8260 407 4229 4 chr3A.!!$F1 3822
2 TraesCS3B01G323800 chr3D 398298681 398302592 3911 False 1206.50 2259 91.8725 180 4211 4 chr3D.!!$F1 4031
3 TraesCS3B01G323800 chr3D 266666371 266666912 541 True 279.00 279 76.6000 186 714 1 chr3D.!!$R1 528
4 TraesCS3B01G323800 chr1D 435269781 435270342 561 False 315.00 315 77.4250 180 725 1 chr1D.!!$F1 545
5 TraesCS3B01G323800 chr6D 289519919 289520482 563 False 298.00 298 77.0030 180 730 1 chr6D.!!$F1 550

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
612 637 0.030235 CCGACGTGTCTTGTGTCTGA 59.970 55.0 0.00 0.0 0.0 3.27 F
735 766 0.650512 CGCGCGGTCTGAAATGTATT 59.349 50.0 24.84 0.0 0.0 1.89 F
2643 3067 0.105593 GAGCTCCATTCATCTGCGGA 59.894 55.0 0.87 0.0 0.0 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2377 2801 1.065782 GGCAGTCTCCTCTTCTTTCCC 60.066 57.143 0.00 0.0 0.0 3.97 R
2685 3109 0.107508 CATGGACGGAGGTGATTGCT 60.108 55.000 0.00 0.0 0.0 3.91 R
3594 4040 0.033228 CAAAAGGCGCCATGGACAAA 59.967 50.000 31.54 0.0 0.0 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.495135 GTGGTAGATCTACTCTTGTACTACC 57.505 44.000 27.68 13.13 41.46 3.18
25 26 6.486320 GTGGTAGATCTACTCTTGTACTACCC 59.514 46.154 27.68 10.66 40.97 3.69
26 27 6.159222 TGGTAGATCTACTCTTGTACTACCCA 59.841 42.308 27.68 12.88 40.97 4.51
27 28 7.147177 TGGTAGATCTACTCTTGTACTACCCAT 60.147 40.741 27.68 0.00 40.97 4.00
28 29 8.381636 GGTAGATCTACTCTTGTACTACCCATA 58.618 40.741 27.68 0.00 38.57 2.74
29 30 9.962809 GTAGATCTACTCTTGTACTACCCATAT 57.037 37.037 23.12 0.00 35.28 1.78
31 32 8.670490 AGATCTACTCTTGTACTACCCATATCA 58.330 37.037 0.00 0.00 0.00 2.15
32 33 9.469097 GATCTACTCTTGTACTACCCATATCAT 57.531 37.037 0.00 0.00 0.00 2.45
33 34 8.865420 TCTACTCTTGTACTACCCATATCATC 57.135 38.462 0.00 0.00 0.00 2.92
34 35 8.445588 TCTACTCTTGTACTACCCATATCATCA 58.554 37.037 0.00 0.00 0.00 3.07
35 36 7.914427 ACTCTTGTACTACCCATATCATCAA 57.086 36.000 0.00 0.00 0.00 2.57
36 37 8.497910 ACTCTTGTACTACCCATATCATCAAT 57.502 34.615 0.00 0.00 0.00 2.57
37 38 9.601810 ACTCTTGTACTACCCATATCATCAATA 57.398 33.333 0.00 0.00 0.00 1.90
48 49 9.758021 ACCCATATCATCAATATTAATCAAGCA 57.242 29.630 0.00 0.00 0.00 3.91
55 56 9.716531 TCATCAATATTAATCAAGCAGGAGTAG 57.283 33.333 0.00 0.00 0.00 2.57
56 57 8.944029 CATCAATATTAATCAAGCAGGAGTAGG 58.056 37.037 0.00 0.00 0.00 3.18
57 58 8.034313 TCAATATTAATCAAGCAGGAGTAGGT 57.966 34.615 0.00 0.00 0.00 3.08
58 59 8.494433 TCAATATTAATCAAGCAGGAGTAGGTT 58.506 33.333 0.00 0.00 0.00 3.50
59 60 9.125026 CAATATTAATCAAGCAGGAGTAGGTTT 57.875 33.333 0.00 0.00 0.00 3.27
60 61 9.700831 AATATTAATCAAGCAGGAGTAGGTTTT 57.299 29.630 0.00 0.00 0.00 2.43
61 62 9.700831 ATATTAATCAAGCAGGAGTAGGTTTTT 57.299 29.630 0.00 0.00 0.00 1.94
63 64 6.819397 AATCAAGCAGGAGTAGGTTTTTAC 57.181 37.500 0.00 0.00 0.00 2.01
64 65 4.648651 TCAAGCAGGAGTAGGTTTTTACC 58.351 43.478 0.00 0.00 0.00 2.85
65 66 4.349930 TCAAGCAGGAGTAGGTTTTTACCT 59.650 41.667 2.01 2.01 43.62 3.08
66 67 4.554960 AGCAGGAGTAGGTTTTTACCTC 57.445 45.455 0.00 0.00 41.12 3.85
67 68 3.263681 AGCAGGAGTAGGTTTTTACCTCC 59.736 47.826 0.00 0.00 41.12 4.30
68 69 3.008704 GCAGGAGTAGGTTTTTACCTCCA 59.991 47.826 0.00 0.00 41.12 3.86
69 70 4.324331 GCAGGAGTAGGTTTTTACCTCCAT 60.324 45.833 0.00 0.00 41.12 3.41
70 71 5.429130 CAGGAGTAGGTTTTTACCTCCATC 58.571 45.833 0.00 0.00 41.12 3.51
71 72 4.161754 AGGAGTAGGTTTTTACCTCCATCG 59.838 45.833 0.00 0.00 41.12 3.84
72 73 4.161001 GGAGTAGGTTTTTACCTCCATCGA 59.839 45.833 0.00 0.00 41.12 3.59
73 74 5.340439 AGTAGGTTTTTACCTCCATCGAG 57.660 43.478 0.00 0.00 41.12 4.04
74 75 5.021458 AGTAGGTTTTTACCTCCATCGAGA 58.979 41.667 0.00 0.00 41.12 4.04
75 76 4.473477 AGGTTTTTACCTCCATCGAGAG 57.527 45.455 0.00 0.00 38.52 3.20
81 82 3.610669 CTCCATCGAGAGGGCCCG 61.611 72.222 18.44 4.06 38.52 6.13
82 83 4.137615 TCCATCGAGAGGGCCCGA 62.138 66.667 18.44 10.63 39.25 5.14
83 84 3.154473 CCATCGAGAGGGCCCGAA 61.154 66.667 18.44 1.01 38.36 4.30
84 85 2.107141 CATCGAGAGGGCCCGAAC 59.893 66.667 18.44 12.45 38.36 3.95
85 86 3.155167 ATCGAGAGGGCCCGAACC 61.155 66.667 18.44 7.31 38.36 3.62
86 87 3.680920 ATCGAGAGGGCCCGAACCT 62.681 63.158 18.44 12.55 42.18 3.50
87 88 4.148825 CGAGAGGGCCCGAACCTG 62.149 72.222 18.44 1.23 38.79 4.00
88 89 3.787001 GAGAGGGCCCGAACCTGG 61.787 72.222 18.44 0.00 38.79 4.45
97 98 1.984066 CCCGAACCTGGGTAAAAACA 58.016 50.000 0.00 0.00 44.76 2.83
98 99 2.521126 CCCGAACCTGGGTAAAAACAT 58.479 47.619 0.00 0.00 44.76 2.71
99 100 2.490509 CCCGAACCTGGGTAAAAACATC 59.509 50.000 0.00 0.00 44.76 3.06
100 101 2.160813 CCGAACCTGGGTAAAAACATCG 59.839 50.000 0.00 0.00 0.00 3.84
101 102 2.809696 CGAACCTGGGTAAAAACATCGT 59.190 45.455 0.00 0.00 0.00 3.73
102 103 3.364565 CGAACCTGGGTAAAAACATCGTG 60.365 47.826 0.00 0.00 0.00 4.35
103 104 3.217681 ACCTGGGTAAAAACATCGTGT 57.782 42.857 0.00 0.00 0.00 4.49
104 105 3.558033 ACCTGGGTAAAAACATCGTGTT 58.442 40.909 0.00 0.00 43.41 3.32
105 106 3.566742 ACCTGGGTAAAAACATCGTGTTC 59.433 43.478 0.00 0.00 40.14 3.18
106 107 3.057806 CCTGGGTAAAAACATCGTGTTCC 60.058 47.826 4.28 2.28 40.14 3.62
107 108 3.818773 CTGGGTAAAAACATCGTGTTCCT 59.181 43.478 4.28 0.00 40.14 3.36
108 109 4.208746 TGGGTAAAAACATCGTGTTCCTT 58.791 39.130 4.28 4.53 40.14 3.36
109 110 4.036971 TGGGTAAAAACATCGTGTTCCTTG 59.963 41.667 4.28 0.00 40.14 3.61
110 111 4.037089 GGGTAAAAACATCGTGTTCCTTGT 59.963 41.667 4.28 0.00 40.14 3.16
111 112 5.209977 GGTAAAAACATCGTGTTCCTTGTC 58.790 41.667 4.28 1.88 40.14 3.18
112 113 5.008316 GGTAAAAACATCGTGTTCCTTGTCT 59.992 40.000 4.28 0.00 40.14 3.41
113 114 4.813296 AAAACATCGTGTTCCTTGTCTC 57.187 40.909 4.28 0.00 40.14 3.36
114 115 3.753294 AACATCGTGTTCCTTGTCTCT 57.247 42.857 0.00 0.00 35.27 3.10
115 116 3.753294 ACATCGTGTTCCTTGTCTCTT 57.247 42.857 0.00 0.00 0.00 2.85
116 117 3.393800 ACATCGTGTTCCTTGTCTCTTG 58.606 45.455 0.00 0.00 0.00 3.02
117 118 3.181465 ACATCGTGTTCCTTGTCTCTTGT 60.181 43.478 0.00 0.00 0.00 3.16
118 119 3.536956 TCGTGTTCCTTGTCTCTTGTT 57.463 42.857 0.00 0.00 0.00 2.83
119 120 4.659111 TCGTGTTCCTTGTCTCTTGTTA 57.341 40.909 0.00 0.00 0.00 2.41
120 121 4.365723 TCGTGTTCCTTGTCTCTTGTTAC 58.634 43.478 0.00 0.00 0.00 2.50
121 122 3.493503 CGTGTTCCTTGTCTCTTGTTACC 59.506 47.826 0.00 0.00 0.00 2.85
122 123 4.448210 GTGTTCCTTGTCTCTTGTTACCA 58.552 43.478 0.00 0.00 0.00 3.25
123 124 5.063880 GTGTTCCTTGTCTCTTGTTACCAT 58.936 41.667 0.00 0.00 0.00 3.55
124 125 5.179555 GTGTTCCTTGTCTCTTGTTACCATC 59.820 44.000 0.00 0.00 0.00 3.51
125 126 4.553330 TCCTTGTCTCTTGTTACCATCC 57.447 45.455 0.00 0.00 0.00 3.51
126 127 3.056107 TCCTTGTCTCTTGTTACCATCCG 60.056 47.826 0.00 0.00 0.00 4.18
127 128 2.380084 TGTCTCTTGTTACCATCCGC 57.620 50.000 0.00 0.00 0.00 5.54
128 129 1.066430 TGTCTCTTGTTACCATCCGCC 60.066 52.381 0.00 0.00 0.00 6.13
129 130 1.207329 GTCTCTTGTTACCATCCGCCT 59.793 52.381 0.00 0.00 0.00 5.52
130 131 2.429610 GTCTCTTGTTACCATCCGCCTA 59.570 50.000 0.00 0.00 0.00 3.93
131 132 2.693591 TCTCTTGTTACCATCCGCCTAG 59.306 50.000 0.00 0.00 0.00 3.02
132 133 2.693591 CTCTTGTTACCATCCGCCTAGA 59.306 50.000 0.00 0.00 0.00 2.43
133 134 2.429610 TCTTGTTACCATCCGCCTAGAC 59.570 50.000 0.00 0.00 0.00 2.59
134 135 0.742505 TGTTACCATCCGCCTAGACG 59.257 55.000 0.00 0.00 0.00 4.18
135 136 0.596859 GTTACCATCCGCCTAGACGC 60.597 60.000 0.00 0.00 0.00 5.19
136 137 1.038681 TTACCATCCGCCTAGACGCA 61.039 55.000 0.00 0.00 0.00 5.24
137 138 1.731433 TACCATCCGCCTAGACGCAC 61.731 60.000 0.00 0.00 0.00 5.34
138 139 2.494445 CATCCGCCTAGACGCACA 59.506 61.111 0.00 0.00 0.00 4.57
139 140 1.589993 CATCCGCCTAGACGCACAG 60.590 63.158 0.00 0.00 0.00 3.66
140 141 2.052690 ATCCGCCTAGACGCACAGT 61.053 57.895 0.00 0.00 0.00 3.55
141 142 1.605058 ATCCGCCTAGACGCACAGTT 61.605 55.000 0.00 0.00 0.00 3.16
142 143 1.805945 CCGCCTAGACGCACAGTTC 60.806 63.158 0.00 0.00 0.00 3.01
143 144 2.152699 CGCCTAGACGCACAGTTCG 61.153 63.158 0.00 0.00 0.00 3.95
144 145 1.805945 GCCTAGACGCACAGTTCGG 60.806 63.158 0.00 0.00 0.00 4.30
145 146 1.153823 CCTAGACGCACAGTTCGGG 60.154 63.158 0.00 0.00 0.00 5.14
146 147 1.592400 CCTAGACGCACAGTTCGGGA 61.592 60.000 0.00 0.00 0.00 5.14
147 148 0.456312 CTAGACGCACAGTTCGGGAC 60.456 60.000 0.00 0.00 0.00 4.46
148 149 1.870055 TAGACGCACAGTTCGGGACC 61.870 60.000 0.00 0.00 0.00 4.46
149 150 4.309950 ACGCACAGTTCGGGACCC 62.310 66.667 0.00 0.00 0.00 4.46
151 152 4.717313 GCACAGTTCGGGACCCCC 62.717 72.222 4.46 0.00 41.09 5.40
152 153 2.928396 CACAGTTCGGGACCCCCT 60.928 66.667 4.46 0.00 42.67 4.79
153 154 1.611261 CACAGTTCGGGACCCCCTA 60.611 63.158 4.46 0.00 42.67 3.53
154 155 1.611556 ACAGTTCGGGACCCCCTAC 60.612 63.158 4.46 0.29 42.67 3.18
155 156 1.305887 CAGTTCGGGACCCCCTACT 60.306 63.158 4.46 2.88 42.67 2.57
156 157 1.001376 AGTTCGGGACCCCCTACTC 59.999 63.158 4.46 0.00 42.67 2.59
157 158 2.043652 TTCGGGACCCCCTACTCG 60.044 66.667 4.46 0.00 42.67 4.18
158 159 2.615465 TTCGGGACCCCCTACTCGA 61.615 63.158 4.46 0.00 42.67 4.04
159 160 2.518825 CGGGACCCCCTACTCGAG 60.519 72.222 11.84 11.84 42.67 4.04
160 161 3.013631 GGGACCCCCTACTCGAGA 58.986 66.667 21.68 1.61 41.34 4.04
161 162 1.542679 GGGACCCCCTACTCGAGAT 59.457 63.158 21.68 6.08 41.34 2.75
162 163 0.540133 GGGACCCCCTACTCGAGATC 60.540 65.000 21.68 4.55 41.34 2.75
163 164 0.540133 GGACCCCCTACTCGAGATCC 60.540 65.000 21.68 9.76 0.00 3.36
164 165 0.890090 GACCCCCTACTCGAGATCCG 60.890 65.000 21.68 3.40 40.25 4.18
165 166 2.269529 CCCCCTACTCGAGATCCGC 61.270 68.421 21.68 0.00 38.37 5.54
166 167 2.269529 CCCCTACTCGAGATCCGCC 61.270 68.421 21.68 0.00 38.37 6.13
167 168 2.618219 CCCTACTCGAGATCCGCCG 61.618 68.421 21.68 0.00 38.37 6.46
168 169 2.618219 CCTACTCGAGATCCGCCGG 61.618 68.421 21.68 0.00 38.37 6.13
169 170 1.892862 CTACTCGAGATCCGCCGGT 60.893 63.158 21.68 0.00 38.37 5.28
170 171 1.445716 CTACTCGAGATCCGCCGGTT 61.446 60.000 21.68 0.00 38.37 4.44
171 172 1.033746 TACTCGAGATCCGCCGGTTT 61.034 55.000 21.68 0.00 38.37 3.27
172 173 1.153628 CTCGAGATCCGCCGGTTTT 60.154 57.895 6.58 0.00 38.37 2.43
173 174 1.421410 CTCGAGATCCGCCGGTTTTG 61.421 60.000 6.58 0.00 38.37 2.44
174 175 1.447140 CGAGATCCGCCGGTTTTGA 60.447 57.895 1.63 0.00 0.00 2.69
175 176 1.693083 CGAGATCCGCCGGTTTTGAC 61.693 60.000 1.63 0.00 0.00 3.18
176 177 0.672401 GAGATCCGCCGGTTTTGACA 60.672 55.000 1.63 0.00 0.00 3.58
177 178 0.953960 AGATCCGCCGGTTTTGACAC 60.954 55.000 1.63 0.00 0.00 3.67
178 179 1.918868 GATCCGCCGGTTTTGACACC 61.919 60.000 1.63 0.00 0.00 4.16
234 235 2.047274 CGCGACCTCCACCATGTT 60.047 61.111 0.00 0.00 0.00 2.71
238 239 0.888736 CGACCTCCACCATGTTTGCA 60.889 55.000 0.00 0.00 0.00 4.08
289 290 4.003788 ACGCCCTTCACCGGTCTG 62.004 66.667 2.59 0.00 0.00 3.51
330 334 0.530431 CTTTGCGGCCTTTGCTTTGT 60.530 50.000 0.00 0.00 37.74 2.83
378 382 0.613777 GATCTTTCGGGTGAGGGTGT 59.386 55.000 0.00 0.00 0.00 4.16
381 385 0.179029 CTTTCGGGTGAGGGTGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
391 395 0.405585 AGGGTGTTGTTGGGATCCTG 59.594 55.000 12.58 0.00 0.00 3.86
430 434 0.530650 AACTCCGGCATGCTATCGTG 60.531 55.000 18.92 9.99 0.00 4.35
445 449 1.958715 CGTGTGGTTCCATGCGTCA 60.959 57.895 0.00 0.00 0.00 4.35
477 482 2.632996 GGGGGAAAAGAGTGGGAAAAAG 59.367 50.000 0.00 0.00 0.00 2.27
488 505 0.112412 GGGAAAAAGGGTGGAGAGCA 59.888 55.000 0.00 0.00 0.00 4.26
522 547 2.257207 AGAGAGTGGGGATTTTGTCGA 58.743 47.619 0.00 0.00 0.00 4.20
604 629 2.031333 GTGTAAGAGTCCGACGTGTCTT 60.031 50.000 0.00 6.72 33.79 3.01
612 637 0.030235 CCGACGTGTCTTGTGTCTGA 59.970 55.000 0.00 0.00 0.00 3.27
619 644 3.004419 CGTGTCTTGTGTCTGAACTCCTA 59.996 47.826 0.00 0.00 0.00 2.94
660 690 8.749354 GTTCCTGTTTATGGAAAAGATATGGTT 58.251 33.333 0.00 0.00 44.14 3.67
666 696 8.630037 GTTTATGGAAAAGATATGGTTCGGATT 58.370 33.333 0.00 0.00 0.00 3.01
671 701 4.422073 AAGATATGGTTCGGATTGCTCA 57.578 40.909 0.00 0.00 0.00 4.26
685 716 1.271856 TGCTCAGGGACCGATACAAA 58.728 50.000 0.00 0.00 0.00 2.83
735 766 0.650512 CGCGCGGTCTGAAATGTATT 59.349 50.000 24.84 0.00 0.00 1.89
736 767 1.062002 CGCGCGGTCTGAAATGTATTT 59.938 47.619 24.84 0.00 0.00 1.40
742 773 3.242413 CGGTCTGAAATGTATTTGAGCGG 60.242 47.826 15.53 6.47 38.68 5.52
745 776 5.353123 GGTCTGAAATGTATTTGAGCGGTTA 59.647 40.000 0.00 0.00 32.16 2.85
750 781 6.431543 TGAAATGTATTTGAGCGGTTAAAGGA 59.568 34.615 10.38 0.00 0.00 3.36
752 783 5.811399 TGTATTTGAGCGGTTAAAGGATG 57.189 39.130 10.38 0.00 0.00 3.51
754 785 3.426787 TTTGAGCGGTTAAAGGATGGA 57.573 42.857 0.00 0.00 0.00 3.41
755 786 2.691409 TGAGCGGTTAAAGGATGGAG 57.309 50.000 0.00 0.00 0.00 3.86
766 809 9.603921 CGGTTAAAGGATGGAGTAATAAAAGTA 57.396 33.333 0.00 0.00 0.00 2.24
842 899 1.258982 CGCGTATTCATTGAGCAGTCC 59.741 52.381 0.00 0.00 0.00 3.85
857 914 1.209747 CAGTCCCTGCTTACCTAACCC 59.790 57.143 0.00 0.00 0.00 4.11
1045 1115 2.029518 CCGATCAGCCGCTATGCA 59.970 61.111 0.00 0.00 0.00 3.96
1216 1286 2.049063 GCACCAGCTTCGTCGTCT 60.049 61.111 0.00 0.00 37.91 4.18
1218 1288 1.891060 GCACCAGCTTCGTCGTCTTG 61.891 60.000 0.00 0.00 37.91 3.02
1284 1354 2.099756 GCACAACAACTTCTCCAGCTTT 59.900 45.455 0.00 0.00 0.00 3.51
1607 2021 9.522804 TTTACTTGGCATACTTTTAAACAACAG 57.477 29.630 0.00 0.00 0.00 3.16
1678 2092 7.430441 GTTCAGTACTATCTCTTCTTGATCCC 58.570 42.308 0.00 0.00 0.00 3.85
1710 2134 8.908903 TGTTTGACAAATAAAATCTACCACACT 58.091 29.630 3.49 0.00 0.00 3.55
1719 2143 4.974645 AATCTACCACACTCACTTCCAA 57.025 40.909 0.00 0.00 0.00 3.53
1724 2148 7.108841 TCTACCACACTCACTTCCAATATAC 57.891 40.000 0.00 0.00 0.00 1.47
1727 2151 6.407202 ACCACACTCACTTCCAATATACTTC 58.593 40.000 0.00 0.00 0.00 3.01
1729 2153 6.352222 CCACACTCACTTCCAATATACTTCCT 60.352 42.308 0.00 0.00 0.00 3.36
1730 2154 6.758886 CACACTCACTTCCAATATACTTCCTC 59.241 42.308 0.00 0.00 0.00 3.71
1731 2155 6.127026 ACACTCACTTCCAATATACTTCCTCC 60.127 42.308 0.00 0.00 0.00 4.30
1732 2156 5.069251 ACTCACTTCCAATATACTTCCTCCG 59.931 44.000 0.00 0.00 0.00 4.63
1733 2157 4.960469 TCACTTCCAATATACTTCCTCCGT 59.040 41.667 0.00 0.00 0.00 4.69
1734 2158 5.424252 TCACTTCCAATATACTTCCTCCGTT 59.576 40.000 0.00 0.00 0.00 4.44
1735 2159 5.753921 CACTTCCAATATACTTCCTCCGTTC 59.246 44.000 0.00 0.00 0.00 3.95
1736 2160 4.950205 TCCAATATACTTCCTCCGTTCC 57.050 45.455 0.00 0.00 0.00 3.62
1737 2161 4.553678 TCCAATATACTTCCTCCGTTCCT 58.446 43.478 0.00 0.00 0.00 3.36
1738 2162 5.708544 TCCAATATACTTCCTCCGTTCCTA 58.291 41.667 0.00 0.00 0.00 2.94
1739 2163 6.138263 TCCAATATACTTCCTCCGTTCCTAA 58.862 40.000 0.00 0.00 0.00 2.69
1740 2164 6.612456 TCCAATATACTTCCTCCGTTCCTAAA 59.388 38.462 0.00 0.00 0.00 1.85
1741 2165 7.291651 TCCAATATACTTCCTCCGTTCCTAAAT 59.708 37.037 0.00 0.00 0.00 1.40
1742 2166 7.387948 CCAATATACTTCCTCCGTTCCTAAATG 59.612 40.741 0.00 0.00 0.00 2.32
1743 2167 2.987232 ACTTCCTCCGTTCCTAAATGC 58.013 47.619 0.00 0.00 0.00 3.56
1744 2168 2.304761 ACTTCCTCCGTTCCTAAATGCA 59.695 45.455 0.00 0.00 0.00 3.96
1745 2169 3.244770 ACTTCCTCCGTTCCTAAATGCAA 60.245 43.478 0.00 0.00 0.00 4.08
1746 2170 2.985896 TCCTCCGTTCCTAAATGCAAG 58.014 47.619 0.00 0.00 0.00 4.01
1747 2171 2.304761 TCCTCCGTTCCTAAATGCAAGT 59.695 45.455 0.00 0.00 0.00 3.16
1748 2172 2.678336 CCTCCGTTCCTAAATGCAAGTC 59.322 50.000 0.00 0.00 0.00 3.01
1749 2173 3.600388 CTCCGTTCCTAAATGCAAGTCT 58.400 45.455 0.00 0.00 0.00 3.24
1750 2174 4.003648 CTCCGTTCCTAAATGCAAGTCTT 58.996 43.478 0.00 0.00 0.00 3.01
1751 2175 4.394729 TCCGTTCCTAAATGCAAGTCTTT 58.605 39.130 0.00 0.00 0.00 2.52
1752 2176 4.215399 TCCGTTCCTAAATGCAAGTCTTTG 59.785 41.667 0.00 0.00 37.36 2.77
1753 2177 4.023193 CCGTTCCTAAATGCAAGTCTTTGT 60.023 41.667 0.00 0.00 36.65 2.83
1754 2178 5.180492 CCGTTCCTAAATGCAAGTCTTTGTA 59.820 40.000 0.00 0.00 36.65 2.41
1755 2179 6.293735 CCGTTCCTAAATGCAAGTCTTTGTAA 60.294 38.462 0.00 0.00 36.65 2.41
1756 2180 7.136119 CGTTCCTAAATGCAAGTCTTTGTAAA 58.864 34.615 0.00 0.00 36.65 2.01
1757 2181 7.323656 CGTTCCTAAATGCAAGTCTTTGTAAAG 59.676 37.037 0.00 0.00 36.65 1.85
1758 2182 8.349983 GTTCCTAAATGCAAGTCTTTGTAAAGA 58.650 33.333 3.05 3.05 42.41 2.52
1759 2183 8.635765 TCCTAAATGCAAGTCTTTGTAAAGAT 57.364 30.769 9.98 0.00 45.83 2.40
1760 2184 9.077885 TCCTAAATGCAAGTCTTTGTAAAGATT 57.922 29.630 9.98 3.73 45.83 2.40
1761 2185 9.696917 CCTAAATGCAAGTCTTTGTAAAGATTT 57.303 29.630 9.98 9.29 45.83 2.17
1764 2188 8.579682 AATGCAAGTCTTTGTAAAGATTTCAC 57.420 30.769 9.98 7.46 45.83 3.18
1765 2189 7.333528 TGCAAGTCTTTGTAAAGATTTCACT 57.666 32.000 9.98 1.06 45.83 3.41
1766 2190 8.445275 TGCAAGTCTTTGTAAAGATTTCACTA 57.555 30.769 9.98 0.00 45.83 2.74
1767 2191 9.066892 TGCAAGTCTTTGTAAAGATTTCACTAT 57.933 29.630 9.98 0.00 45.83 2.12
1768 2192 9.334693 GCAAGTCTTTGTAAAGATTTCACTATG 57.665 33.333 9.98 2.59 45.83 2.23
1769 2193 9.831737 CAAGTCTTTGTAAAGATTTCACTATGG 57.168 33.333 9.98 0.00 45.83 2.74
1770 2194 9.793259 AAGTCTTTGTAAAGATTTCACTATGGA 57.207 29.630 9.98 0.00 45.83 3.41
1771 2195 9.220767 AGTCTTTGTAAAGATTTCACTATGGAC 57.779 33.333 9.98 0.00 45.83 4.02
1772 2196 9.220767 GTCTTTGTAAAGATTTCACTATGGACT 57.779 33.333 9.98 0.00 45.83 3.85
1779 2203 8.873215 AAAGATTTCACTATGGACTACATACG 57.127 34.615 0.00 0.00 41.03 3.06
1780 2204 6.982852 AGATTTCACTATGGACTACATACGG 58.017 40.000 0.00 0.00 41.03 4.02
1781 2205 6.776116 AGATTTCACTATGGACTACATACGGA 59.224 38.462 0.00 0.00 41.03 4.69
1782 2206 6.387041 TTTCACTATGGACTACATACGGAG 57.613 41.667 0.00 0.00 41.03 4.63
1783 2207 3.819337 TCACTATGGACTACATACGGAGC 59.181 47.826 0.00 0.00 41.03 4.70
1784 2208 3.568430 CACTATGGACTACATACGGAGCA 59.432 47.826 0.00 0.00 41.03 4.26
1785 2209 4.037565 CACTATGGACTACATACGGAGCAA 59.962 45.833 0.00 0.00 41.03 3.91
1786 2210 4.647853 ACTATGGACTACATACGGAGCAAA 59.352 41.667 0.00 0.00 41.03 3.68
1787 2211 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
1788 2212 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
1789 2213 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
1790 2214 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
1791 2215 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
1792 2216 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
1793 2217 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
1794 2218 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
1795 2219 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
1796 2220 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
1797 2221 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
1798 2222 2.749621 ACGGAGCAAAATGAGTGAATCC 59.250 45.455 0.00 0.00 0.00 3.01
1799 2223 2.749076 CGGAGCAAAATGAGTGAATCCA 59.251 45.455 0.00 0.00 0.00 3.41
1800 2224 3.379372 CGGAGCAAAATGAGTGAATCCAT 59.621 43.478 0.00 0.00 0.00 3.41
1801 2225 4.576053 CGGAGCAAAATGAGTGAATCCATA 59.424 41.667 0.00 0.00 0.00 2.74
1802 2226 5.504665 CGGAGCAAAATGAGTGAATCCATAC 60.505 44.000 0.00 0.00 0.00 2.39
1803 2227 5.591877 GGAGCAAAATGAGTGAATCCATACT 59.408 40.000 0.00 0.00 0.00 2.12
1804 2228 6.238593 GGAGCAAAATGAGTGAATCCATACTC 60.239 42.308 0.00 0.00 42.77 2.59
1812 2236 6.441093 GAGTGAATCCATACTCAAAATGCA 57.559 37.500 0.00 0.00 42.18 3.96
1813 2237 7.035840 GAGTGAATCCATACTCAAAATGCAT 57.964 36.000 0.00 0.00 42.18 3.96
1814 2238 7.035840 AGTGAATCCATACTCAAAATGCATC 57.964 36.000 0.00 0.00 0.00 3.91
1815 2239 6.832384 AGTGAATCCATACTCAAAATGCATCT 59.168 34.615 0.00 0.00 0.00 2.90
1816 2240 7.994911 AGTGAATCCATACTCAAAATGCATCTA 59.005 33.333 0.00 0.00 0.00 1.98
1817 2241 8.790718 GTGAATCCATACTCAAAATGCATCTAT 58.209 33.333 0.00 0.00 0.00 1.98
1826 2250 8.484641 ACTCAAAATGCATCTATATACATCCG 57.515 34.615 0.00 0.00 0.00 4.18
1827 2251 8.097038 ACTCAAAATGCATCTATATACATCCGT 58.903 33.333 0.00 0.00 0.00 4.69
1828 2252 9.586435 CTCAAAATGCATCTATATACATCCGTA 57.414 33.333 0.00 0.00 0.00 4.02
1832 2256 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
1833 2257 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
1834 2258 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
1835 2259 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
1836 2260 7.435488 GCATCTATATACATCCGTATGTGGTTC 59.565 40.741 3.56 0.00 45.99 3.62
1837 2261 8.466798 CATCTATATACATCCGTATGTGGTTCA 58.533 37.037 3.56 0.00 45.99 3.18
1838 2262 8.589701 TCTATATACATCCGTATGTGGTTCAT 57.410 34.615 3.56 0.00 45.99 2.57
1839 2263 9.689501 TCTATATACATCCGTATGTGGTTCATA 57.310 33.333 3.56 0.00 45.99 2.15
1840 2264 9.952188 CTATATACATCCGTATGTGGTTCATAG 57.048 37.037 3.56 0.80 45.99 2.23
1841 2265 6.665992 ATACATCCGTATGTGGTTCATAGT 57.334 37.500 3.56 0.00 45.99 2.12
1842 2266 4.693283 ACATCCGTATGTGGTTCATAGTG 58.307 43.478 0.00 0.00 44.79 2.74
1843 2267 3.812156 TCCGTATGTGGTTCATAGTGG 57.188 47.619 0.00 0.00 39.36 4.00
1844 2268 3.367321 TCCGTATGTGGTTCATAGTGGA 58.633 45.455 0.00 0.00 39.94 4.02
1845 2269 3.770388 TCCGTATGTGGTTCATAGTGGAA 59.230 43.478 0.00 0.00 39.60 3.53
1846 2270 4.407621 TCCGTATGTGGTTCATAGTGGAAT 59.592 41.667 0.00 0.00 39.60 3.01
1847 2271 4.750098 CCGTATGTGGTTCATAGTGGAATC 59.250 45.833 0.00 0.00 39.36 2.52
1848 2272 5.453339 CCGTATGTGGTTCATAGTGGAATCT 60.453 44.000 0.00 0.00 39.36 2.40
1849 2273 5.692204 CGTATGTGGTTCATAGTGGAATCTC 59.308 44.000 0.00 0.00 39.36 2.75
1850 2274 5.965033 ATGTGGTTCATAGTGGAATCTCT 57.035 39.130 0.00 0.00 34.67 3.10
1851 2275 7.255486 CGTATGTGGTTCATAGTGGAATCTCTA 60.255 40.741 0.00 0.00 39.36 2.43
1852 2276 6.222038 TGTGGTTCATAGTGGAATCTCTAC 57.778 41.667 0.00 0.00 0.00 2.59
1853 2277 5.719563 TGTGGTTCATAGTGGAATCTCTACA 59.280 40.000 0.00 0.00 29.47 2.74
1854 2278 6.212589 TGTGGTTCATAGTGGAATCTCTACAA 59.787 38.462 0.00 0.00 29.47 2.41
1855 2279 7.103641 GTGGTTCATAGTGGAATCTCTACAAA 58.896 38.462 0.00 0.00 29.47 2.83
1856 2280 7.278868 GTGGTTCATAGTGGAATCTCTACAAAG 59.721 40.741 0.00 0.00 29.47 2.77
1857 2281 7.180229 TGGTTCATAGTGGAATCTCTACAAAGA 59.820 37.037 0.00 0.00 29.47 2.52
1858 2282 7.492994 GGTTCATAGTGGAATCTCTACAAAGAC 59.507 40.741 0.00 0.00 29.47 3.01
1859 2283 7.962995 TCATAGTGGAATCTCTACAAAGACT 57.037 36.000 0.00 0.00 29.47 3.24
1860 2284 8.367660 TCATAGTGGAATCTCTACAAAGACTT 57.632 34.615 0.00 0.00 29.47 3.01
1861 2285 9.475620 TCATAGTGGAATCTCTACAAAGACTTA 57.524 33.333 0.00 0.00 29.47 2.24
1876 2300 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
1877 2301 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
1878 2302 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1879 2303 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
1880 2304 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
1952 2376 8.100791 GGTAATGGTAATGCATGATACCTCTTA 58.899 37.037 22.39 17.44 41.76 2.10
1957 2381 4.541973 ATGCATGATACCTCTTATGCGA 57.458 40.909 0.00 0.00 46.61 5.10
2170 2594 5.598830 TGATAGTGAAAGGAGGGACTATGAC 59.401 44.000 0.00 0.00 41.55 3.06
2345 2769 4.895668 ATTGTGAATGCACCTGGATTTT 57.104 36.364 0.00 0.00 44.51 1.82
2377 2801 6.074409 GCTTCGTAGAACAATCTGATCATCAG 60.074 42.308 8.54 8.54 45.90 2.90
2423 2847 7.976414 AAACCAATTTCATTCCATGAGGATA 57.024 32.000 0.00 0.00 45.26 2.59
2638 3062 5.188555 TGTTCTTACAGAGCTCCATTCATCT 59.811 40.000 10.93 0.00 0.00 2.90
2639 3063 5.273674 TCTTACAGAGCTCCATTCATCTG 57.726 43.478 10.93 1.61 43.81 2.90
2640 3064 2.328819 ACAGAGCTCCATTCATCTGC 57.671 50.000 10.93 0.00 42.33 4.26
2641 3065 1.218763 CAGAGCTCCATTCATCTGCG 58.781 55.000 10.93 0.00 33.41 5.18
2642 3066 0.106335 AGAGCTCCATTCATCTGCGG 59.894 55.000 10.93 0.00 0.00 5.69
2643 3067 0.105593 GAGCTCCATTCATCTGCGGA 59.894 55.000 0.87 0.00 0.00 5.54
2644 3068 0.106335 AGCTCCATTCATCTGCGGAG 59.894 55.000 0.00 0.00 46.53 4.63
2645 3069 0.105593 GCTCCATTCATCTGCGGAGA 59.894 55.000 9.76 9.76 46.71 3.71
2646 3070 1.873069 GCTCCATTCATCTGCGGAGAG 60.873 57.143 13.48 4.97 46.71 3.20
2647 3071 1.411977 CTCCATTCATCTGCGGAGAGT 59.588 52.381 13.48 0.00 46.71 3.24
2648 3072 1.137675 TCCATTCATCTGCGGAGAGTG 59.862 52.381 13.48 10.86 0.00 3.51
2649 3073 1.137675 CCATTCATCTGCGGAGAGTGA 59.862 52.381 13.48 12.92 0.00 3.41
2650 3074 2.471818 CATTCATCTGCGGAGAGTGAG 58.528 52.381 13.48 2.56 0.00 3.51
2651 3075 0.174389 TTCATCTGCGGAGAGTGAGC 59.826 55.000 13.48 0.00 0.00 4.26
2652 3076 1.227205 CATCTGCGGAGAGTGAGCC 60.227 63.158 13.48 0.00 0.00 4.70
2653 3077 2.430610 ATCTGCGGAGAGTGAGCCC 61.431 63.158 13.48 0.00 0.00 5.19
2654 3078 4.154347 CTGCGGAGAGTGAGCCCC 62.154 72.222 0.00 0.00 0.00 5.80
2655 3079 4.704103 TGCGGAGAGTGAGCCCCT 62.704 66.667 0.00 0.00 0.00 4.79
2656 3080 3.844090 GCGGAGAGTGAGCCCCTC 61.844 72.222 0.00 0.00 0.00 4.30
2657 3081 3.151022 CGGAGAGTGAGCCCCTCC 61.151 72.222 0.00 0.00 42.24 4.30
2658 3082 2.039624 GGAGAGTGAGCCCCTCCA 59.960 66.667 0.00 0.00 44.42 3.86
2659 3083 1.383803 GGAGAGTGAGCCCCTCCAT 60.384 63.158 0.00 0.00 44.42 3.41
2660 3084 0.985490 GGAGAGTGAGCCCCTCCATT 60.985 60.000 0.00 0.00 44.42 3.16
2661 3085 0.467804 GAGAGTGAGCCCCTCCATTC 59.532 60.000 0.00 0.00 0.00 2.67
2662 3086 0.252881 AGAGTGAGCCCCTCCATTCA 60.253 55.000 0.00 0.00 0.00 2.57
2663 3087 0.842635 GAGTGAGCCCCTCCATTCAT 59.157 55.000 0.00 0.00 0.00 2.57
2664 3088 0.842635 AGTGAGCCCCTCCATTCATC 59.157 55.000 0.00 0.00 0.00 2.92
2667 3091 0.536915 GAGCCCCTCCATTCATCTGC 60.537 60.000 0.00 0.00 0.00 4.26
2683 3107 3.474570 GCGGAGAGTGAGCCCCAT 61.475 66.667 0.00 0.00 0.00 4.00
2685 3109 2.060383 CGGAGAGTGAGCCCCATGA 61.060 63.158 0.00 0.00 0.00 3.07
3333 3763 7.121168 ACCATTGTCAATGACTCGTGATATTTT 59.879 33.333 24.31 0.00 41.46 1.82
3391 3837 4.410555 TGCCTGTTGGAGGGTTTTTATTTT 59.589 37.500 0.00 0.00 43.07 1.82
3432 3878 4.142315 CCAGCTATTTGAACCATGGTCAAG 60.142 45.833 20.07 12.65 0.00 3.02
3496 3942 3.430790 CCGTAGTGGCTTCAGATGATCAA 60.431 47.826 0.00 0.00 0.00 2.57
3503 3949 7.232188 AGTGGCTTCAGATGATCAATGATATT 58.768 34.615 13.10 0.00 0.00 1.28
3506 3952 9.174166 TGGCTTCAGATGATCAATGATATTATG 57.826 33.333 13.10 0.00 0.00 1.90
3507 3953 9.175312 GGCTTCAGATGATCAATGATATTATGT 57.825 33.333 13.10 0.00 0.00 2.29
3522 3968 8.993404 TGATATTATGTCCATGGTTCATTTGA 57.007 30.769 22.55 13.61 0.00 2.69
3552 3998 0.320334 TGTGTCATCGCCATCAACGT 60.320 50.000 0.00 0.00 0.00 3.99
3553 3999 0.796312 GTGTCATCGCCATCAACGTT 59.204 50.000 0.00 0.00 0.00 3.99
3554 4000 1.196808 GTGTCATCGCCATCAACGTTT 59.803 47.619 0.00 0.00 0.00 3.60
3555 4001 1.196581 TGTCATCGCCATCAACGTTTG 59.803 47.619 0.00 0.00 0.00 2.93
3556 4002 0.167908 TCATCGCCATCAACGTTTGC 59.832 50.000 0.00 0.00 0.00 3.68
3557 4003 0.168788 CATCGCCATCAACGTTTGCT 59.831 50.000 0.00 0.00 0.00 3.91
3558 4004 0.168788 ATCGCCATCAACGTTTGCTG 59.831 50.000 0.00 0.00 0.00 4.41
3559 4005 2.082366 CGCCATCAACGTTTGCTGC 61.082 57.895 0.00 0.00 0.00 5.25
3560 4006 1.286880 GCCATCAACGTTTGCTGCT 59.713 52.632 0.00 0.00 0.00 4.24
3561 4007 0.318955 GCCATCAACGTTTGCTGCTT 60.319 50.000 0.00 0.00 0.00 3.91
3562 4008 1.411394 CCATCAACGTTTGCTGCTTG 58.589 50.000 0.00 0.00 0.00 4.01
3563 4009 0.780002 CATCAACGTTTGCTGCTTGC 59.220 50.000 0.00 0.00 43.25 4.01
3564 4010 0.318955 ATCAACGTTTGCTGCTTGCC 60.319 50.000 0.00 0.00 42.00 4.52
3565 4011 1.066257 CAACGTTTGCTGCTTGCCT 59.934 52.632 0.00 0.00 42.00 4.75
3566 4012 1.066257 AACGTTTGCTGCTTGCCTG 59.934 52.632 0.00 0.00 42.00 4.85
3567 4013 2.732094 CGTTTGCTGCTTGCCTGC 60.732 61.111 0.00 1.83 42.00 4.85
3568 4014 2.732658 GTTTGCTGCTTGCCTGCT 59.267 55.556 0.00 0.00 42.00 4.24
3569 4015 1.372623 GTTTGCTGCTTGCCTGCTC 60.373 57.895 0.00 0.00 42.00 4.26
3570 4016 2.567497 TTTGCTGCTTGCCTGCTCC 61.567 57.895 0.00 0.00 42.00 4.70
3571 4017 2.989173 TTTGCTGCTTGCCTGCTCCT 62.989 55.000 0.00 0.00 42.00 3.69
3572 4018 3.441290 GCTGCTTGCCTGCTCCTG 61.441 66.667 0.00 0.00 35.71 3.86
3573 4019 2.350134 CTGCTTGCCTGCTCCTGA 59.650 61.111 0.00 0.00 0.00 3.86
3574 4020 1.745864 CTGCTTGCCTGCTCCTGAG 60.746 63.158 0.00 0.00 0.00 3.35
3575 4021 2.438075 GCTTGCCTGCTCCTGAGG 60.438 66.667 0.00 0.00 0.00 3.86
3581 4027 2.564471 CCTGCTCCTGAGGCTTTTG 58.436 57.895 0.00 0.00 0.00 2.44
3582 4028 0.251077 CCTGCTCCTGAGGCTTTTGT 60.251 55.000 0.00 0.00 0.00 2.83
3583 4029 0.879765 CTGCTCCTGAGGCTTTTGTG 59.120 55.000 0.00 0.00 0.00 3.33
3584 4030 1.174712 TGCTCCTGAGGCTTTTGTGC 61.175 55.000 0.00 0.00 0.00 4.57
3585 4031 1.174712 GCTCCTGAGGCTTTTGTGCA 61.175 55.000 0.00 0.00 34.04 4.57
3586 4032 1.542492 CTCCTGAGGCTTTTGTGCAT 58.458 50.000 0.00 0.00 34.04 3.96
3587 4033 1.201647 CTCCTGAGGCTTTTGTGCATG 59.798 52.381 0.00 0.00 34.04 4.06
3588 4034 0.245539 CCTGAGGCTTTTGTGCATGG 59.754 55.000 0.00 0.00 34.04 3.66
3589 4035 0.389426 CTGAGGCTTTTGTGCATGGC 60.389 55.000 0.00 0.00 34.04 4.40
3590 4036 1.444895 GAGGCTTTTGTGCATGGCG 60.445 57.895 0.00 0.00 34.04 5.69
3591 4037 3.113979 GGCTTTTGTGCATGGCGC 61.114 61.111 0.00 0.00 42.89 6.53
3592 4038 3.113979 GCTTTTGTGCATGGCGCC 61.114 61.111 22.73 22.73 41.33 6.53
3593 4039 2.652530 CTTTTGTGCATGGCGCCT 59.347 55.556 29.70 10.60 41.33 5.52
3594 4040 1.005867 CTTTTGTGCATGGCGCCTT 60.006 52.632 29.70 19.97 41.33 4.35
3595 4041 0.600782 CTTTTGTGCATGGCGCCTTT 60.601 50.000 29.70 12.78 41.33 3.11
3596 4042 0.179062 TTTTGTGCATGGCGCCTTTT 60.179 45.000 29.70 9.86 41.33 2.27
3597 4043 0.879400 TTTGTGCATGGCGCCTTTTG 60.879 50.000 29.70 22.22 41.33 2.44
3598 4044 2.025767 TTGTGCATGGCGCCTTTTGT 62.026 50.000 29.70 5.47 41.33 2.83
3599 4045 1.734117 GTGCATGGCGCCTTTTGTC 60.734 57.895 29.70 17.09 41.33 3.18
3600 4046 2.125952 GCATGGCGCCTTTTGTCC 60.126 61.111 29.70 7.17 32.94 4.02
3601 4047 2.929903 GCATGGCGCCTTTTGTCCA 61.930 57.895 29.70 4.25 32.94 4.02
3602 4048 1.892338 CATGGCGCCTTTTGTCCAT 59.108 52.632 29.70 6.94 39.72 3.41
3603 4049 0.458889 CATGGCGCCTTTTGTCCATG 60.459 55.000 29.70 16.18 46.60 3.66
3648 4094 1.553706 CTTGGCTGCTTTTCCCTGAT 58.446 50.000 0.00 0.00 0.00 2.90
3687 4133 2.280186 CCTCGCCCTGGATTACGC 60.280 66.667 0.00 0.00 0.00 4.42
3690 4136 2.588877 CGCCCTGGATTACGCAGG 60.589 66.667 0.00 0.00 35.62 4.85
3727 4173 2.289257 GCAAAAGGATCCTTTGCTGCTT 60.289 45.455 35.85 22.25 44.50 3.91
3765 4211 0.827507 GGCTTGGCTCAAAACTGGGA 60.828 55.000 0.00 0.00 0.00 4.37
3770 4216 0.895559 GGCTCAAAACTGGGACCTGG 60.896 60.000 0.00 0.00 0.00 4.45
3803 4251 1.003118 GCCCTTCCCGTCATGCATATA 59.997 52.381 0.00 0.00 0.00 0.86
3804 4252 2.936993 GCCCTTCCCGTCATGCATATAG 60.937 54.545 0.00 0.00 0.00 1.31
3805 4253 2.303022 CCCTTCCCGTCATGCATATAGT 59.697 50.000 0.00 0.00 0.00 2.12
3806 4254 3.589988 CCTTCCCGTCATGCATATAGTC 58.410 50.000 0.00 0.00 0.00 2.59
3807 4255 3.006859 CCTTCCCGTCATGCATATAGTCA 59.993 47.826 0.00 0.00 0.00 3.41
3808 4256 3.660501 TCCCGTCATGCATATAGTCAC 57.339 47.619 0.00 0.00 0.00 3.67
3809 4257 3.230976 TCCCGTCATGCATATAGTCACT 58.769 45.455 0.00 0.00 0.00 3.41
3810 4258 4.403734 TCCCGTCATGCATATAGTCACTA 58.596 43.478 0.00 0.00 0.00 2.74
3811 4259 4.217767 TCCCGTCATGCATATAGTCACTAC 59.782 45.833 0.00 0.00 0.00 2.73
3897 4348 6.697455 TGCAAAATTTTACAGATGCGTTGTAA 59.303 30.769 2.44 8.63 38.77 2.41
3898 4349 7.001347 GCAAAATTTTACAGATGCGTTGTAAC 58.999 34.615 2.44 0.00 39.86 2.50
3980 4431 1.002544 GGTAGAACAACCAGCTGCTCT 59.997 52.381 8.66 6.93 39.50 4.09
4043 4494 4.649310 TGTGCTAACGCCGCGTGA 62.649 61.111 20.97 11.61 39.99 4.35
4108 4560 2.148916 TAGGGCATATTCAACGCTCG 57.851 50.000 0.00 0.00 0.00 5.03
4109 4561 1.160329 AGGGCATATTCAACGCTCGC 61.160 55.000 0.00 0.00 0.00 5.03
4110 4562 1.160329 GGGCATATTCAACGCTCGCT 61.160 55.000 0.00 0.00 0.00 4.93
4111 4563 0.233332 GGCATATTCAACGCTCGCTC 59.767 55.000 0.00 0.00 0.00 5.03
4117 4569 4.680237 CAACGCTCGCTCACCCCA 62.680 66.667 0.00 0.00 0.00 4.96
4120 4572 3.121030 CGCTCGCTCACCCCAAAG 61.121 66.667 0.00 0.00 0.00 2.77
4125 4577 1.266989 CTCGCTCACCCCAAAGTTTTC 59.733 52.381 0.00 0.00 0.00 2.29
4162 4614 1.216977 CCGGTCATCCAACGCTACA 59.783 57.895 0.00 0.00 0.00 2.74
4170 4622 0.878416 TCCAACGCTACATGCAAACC 59.122 50.000 0.00 0.00 43.06 3.27
4213 4665 2.636830 ACTCGGAGGAAATTCATGCAG 58.363 47.619 10.23 0.00 0.00 4.41
4216 4668 4.101585 ACTCGGAGGAAATTCATGCAGATA 59.898 41.667 10.23 0.00 0.00 1.98
4220 4672 5.568392 GGAGGAAATTCATGCAGATAGGAT 58.432 41.667 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.486320 GGGTAGTACAAGAGTAGATCTACCAC 59.514 46.154 25.93 20.17 43.02 4.16
1 2 6.159222 TGGGTAGTACAAGAGTAGATCTACCA 59.841 42.308 25.93 11.57 43.02 3.25
2 3 6.599445 TGGGTAGTACAAGAGTAGATCTACC 58.401 44.000 25.93 18.03 41.83 3.18
3 4 9.962809 ATATGGGTAGTACAAGAGTAGATCTAC 57.037 37.037 22.97 22.97 37.23 2.59
5 6 8.670490 TGATATGGGTAGTACAAGAGTAGATCT 58.330 37.037 0.00 0.00 41.27 2.75
6 7 8.865420 TGATATGGGTAGTACAAGAGTAGATC 57.135 38.462 2.06 0.00 0.00 2.75
7 8 9.469097 GATGATATGGGTAGTACAAGAGTAGAT 57.531 37.037 2.06 0.00 0.00 1.98
8 9 8.445588 TGATGATATGGGTAGTACAAGAGTAGA 58.554 37.037 2.06 0.00 0.00 2.59
9 10 8.637196 TGATGATATGGGTAGTACAAGAGTAG 57.363 38.462 2.06 0.00 0.00 2.57
10 11 9.601810 ATTGATGATATGGGTAGTACAAGAGTA 57.398 33.333 2.06 0.00 0.00 2.59
11 12 7.914427 TTGATGATATGGGTAGTACAAGAGT 57.086 36.000 2.06 0.00 0.00 3.24
22 23 9.758021 TGCTTGATTAATATTGATGATATGGGT 57.242 29.630 0.00 0.00 31.27 4.51
29 30 9.716531 CTACTCCTGCTTGATTAATATTGATGA 57.283 33.333 0.00 0.00 0.00 2.92
30 31 8.944029 CCTACTCCTGCTTGATTAATATTGATG 58.056 37.037 0.00 0.00 0.00 3.07
31 32 8.664079 ACCTACTCCTGCTTGATTAATATTGAT 58.336 33.333 0.00 0.00 0.00 2.57
32 33 8.034313 ACCTACTCCTGCTTGATTAATATTGA 57.966 34.615 0.00 0.00 0.00 2.57
33 34 8.682936 AACCTACTCCTGCTTGATTAATATTG 57.317 34.615 0.00 0.00 0.00 1.90
34 35 9.700831 AAAACCTACTCCTGCTTGATTAATATT 57.299 29.630 0.00 0.00 0.00 1.28
35 36 9.700831 AAAAACCTACTCCTGCTTGATTAATAT 57.299 29.630 0.00 0.00 0.00 1.28
37 38 8.957466 GTAAAAACCTACTCCTGCTTGATTAAT 58.043 33.333 0.00 0.00 0.00 1.40
38 39 7.392393 GGTAAAAACCTACTCCTGCTTGATTAA 59.608 37.037 0.00 0.00 0.00 1.40
39 40 6.882678 GGTAAAAACCTACTCCTGCTTGATTA 59.117 38.462 0.00 0.00 0.00 1.75
40 41 5.710567 GGTAAAAACCTACTCCTGCTTGATT 59.289 40.000 0.00 0.00 0.00 2.57
41 42 5.014228 AGGTAAAAACCTACTCCTGCTTGAT 59.986 40.000 0.00 0.00 38.58 2.57
42 43 4.349930 AGGTAAAAACCTACTCCTGCTTGA 59.650 41.667 0.00 0.00 38.58 3.02
43 44 4.652822 AGGTAAAAACCTACTCCTGCTTG 58.347 43.478 0.00 0.00 38.58 4.01
44 45 4.263374 GGAGGTAAAAACCTACTCCTGCTT 60.263 45.833 0.00 0.00 40.86 3.91
45 46 3.263681 GGAGGTAAAAACCTACTCCTGCT 59.736 47.826 0.00 0.00 40.86 4.24
46 47 3.008704 TGGAGGTAAAAACCTACTCCTGC 59.991 47.826 8.24 0.00 41.39 4.85
47 48 4.903045 TGGAGGTAAAAACCTACTCCTG 57.097 45.455 8.24 0.00 41.39 3.86
48 49 4.161754 CGATGGAGGTAAAAACCTACTCCT 59.838 45.833 8.24 0.00 41.39 3.69
49 50 4.161001 TCGATGGAGGTAAAAACCTACTCC 59.839 45.833 8.24 0.00 41.39 3.85
50 51 5.126707 TCTCGATGGAGGTAAAAACCTACTC 59.873 44.000 8.24 3.11 41.39 2.59
51 52 5.021458 TCTCGATGGAGGTAAAAACCTACT 58.979 41.667 8.24 0.00 41.39 2.57
52 53 5.334724 TCTCGATGGAGGTAAAAACCTAC 57.665 43.478 4.78 0.00 40.86 3.18
53 54 4.404715 CCTCTCGATGGAGGTAAAAACCTA 59.595 45.833 11.66 0.00 45.65 3.08
54 55 3.197983 CCTCTCGATGGAGGTAAAAACCT 59.802 47.826 11.66 0.00 45.65 3.50
55 56 3.532542 CCTCTCGATGGAGGTAAAAACC 58.467 50.000 11.66 0.00 45.65 3.27
64 65 3.610669 CGGGCCCTCTCGATGGAG 61.611 72.222 22.43 0.00 41.89 3.86
65 66 3.672338 TTCGGGCCCTCTCGATGGA 62.672 63.158 22.43 3.53 35.25 3.41
66 67 3.154473 TTCGGGCCCTCTCGATGG 61.154 66.667 22.43 0.54 35.25 3.51
67 68 2.107141 GTTCGGGCCCTCTCGATG 59.893 66.667 22.43 1.43 35.25 3.84
68 69 3.155167 GGTTCGGGCCCTCTCGAT 61.155 66.667 22.43 0.00 35.25 3.59
69 70 4.377760 AGGTTCGGGCCCTCTCGA 62.378 66.667 22.43 9.26 0.00 4.04
70 71 4.148825 CAGGTTCGGGCCCTCTCG 62.149 72.222 22.43 6.49 0.00 4.04
71 72 3.787001 CCAGGTTCGGGCCCTCTC 61.787 72.222 22.43 9.34 0.00 3.20
79 80 2.160813 CGATGTTTTTACCCAGGTTCGG 59.839 50.000 0.00 0.00 0.00 4.30
80 81 2.809696 ACGATGTTTTTACCCAGGTTCG 59.190 45.455 0.00 0.00 0.00 3.95
81 82 3.566742 ACACGATGTTTTTACCCAGGTTC 59.433 43.478 0.00 0.00 0.00 3.62
82 83 3.558033 ACACGATGTTTTTACCCAGGTT 58.442 40.909 0.00 0.00 0.00 3.50
83 84 3.217681 ACACGATGTTTTTACCCAGGT 57.782 42.857 0.00 0.00 0.00 4.00
84 85 3.057806 GGAACACGATGTTTTTACCCAGG 60.058 47.826 0.00 0.00 41.28 4.45
85 86 3.818773 AGGAACACGATGTTTTTACCCAG 59.181 43.478 0.00 0.00 41.28 4.45
86 87 3.822940 AGGAACACGATGTTTTTACCCA 58.177 40.909 0.00 0.00 41.28 4.51
87 88 4.037089 ACAAGGAACACGATGTTTTTACCC 59.963 41.667 0.00 0.00 41.28 3.69
88 89 5.008316 AGACAAGGAACACGATGTTTTTACC 59.992 40.000 0.00 0.00 41.28 2.85
89 90 6.018180 AGAGACAAGGAACACGATGTTTTTAC 60.018 38.462 0.00 0.00 41.28 2.01
90 91 6.053005 AGAGACAAGGAACACGATGTTTTTA 58.947 36.000 0.00 0.00 41.28 1.52
91 92 4.881850 AGAGACAAGGAACACGATGTTTTT 59.118 37.500 0.00 0.00 41.28 1.94
92 93 4.451900 AGAGACAAGGAACACGATGTTTT 58.548 39.130 0.00 0.00 41.28 2.43
93 94 4.073293 AGAGACAAGGAACACGATGTTT 57.927 40.909 0.00 0.00 41.28 2.83
94 95 3.753294 AGAGACAAGGAACACGATGTT 57.247 42.857 3.52 3.52 44.37 2.71
95 96 3.181465 ACAAGAGACAAGGAACACGATGT 60.181 43.478 0.00 0.00 0.00 3.06
96 97 3.393800 ACAAGAGACAAGGAACACGATG 58.606 45.455 0.00 0.00 0.00 3.84
97 98 3.753294 ACAAGAGACAAGGAACACGAT 57.247 42.857 0.00 0.00 0.00 3.73
98 99 3.536956 AACAAGAGACAAGGAACACGA 57.463 42.857 0.00 0.00 0.00 4.35
99 100 3.493503 GGTAACAAGAGACAAGGAACACG 59.506 47.826 0.00 0.00 0.00 4.49
116 117 0.596859 GCGTCTAGGCGGATGGTAAC 60.597 60.000 19.86 0.00 0.00 2.50
117 118 1.038681 TGCGTCTAGGCGGATGGTAA 61.039 55.000 19.86 0.00 35.06 2.85
118 119 1.454295 TGCGTCTAGGCGGATGGTA 60.454 57.895 19.86 0.00 35.06 3.25
119 120 2.758327 TGCGTCTAGGCGGATGGT 60.758 61.111 19.86 0.00 35.06 3.55
120 121 2.279517 GTGCGTCTAGGCGGATGG 60.280 66.667 19.86 0.00 34.24 3.51
121 122 1.589993 CTGTGCGTCTAGGCGGATG 60.590 63.158 19.86 9.25 34.24 3.51
122 123 1.605058 AACTGTGCGTCTAGGCGGAT 61.605 55.000 19.86 0.00 34.24 4.18
123 124 2.209064 GAACTGTGCGTCTAGGCGGA 62.209 60.000 19.86 14.02 35.06 5.54
124 125 1.805945 GAACTGTGCGTCTAGGCGG 60.806 63.158 19.86 3.85 35.06 6.13
125 126 2.152699 CGAACTGTGCGTCTAGGCG 61.153 63.158 13.55 13.55 35.06 5.52
126 127 1.805945 CCGAACTGTGCGTCTAGGC 60.806 63.158 7.51 0.00 0.00 3.93
127 128 1.153823 CCCGAACTGTGCGTCTAGG 60.154 63.158 7.51 0.00 0.00 3.02
128 129 0.456312 GTCCCGAACTGTGCGTCTAG 60.456 60.000 7.51 0.00 0.00 2.43
129 130 1.582968 GTCCCGAACTGTGCGTCTA 59.417 57.895 7.51 0.00 0.00 2.59
130 131 2.338984 GTCCCGAACTGTGCGTCT 59.661 61.111 7.51 0.00 0.00 4.18
131 132 2.737376 GGTCCCGAACTGTGCGTC 60.737 66.667 7.51 0.00 0.00 5.19
132 133 4.309950 GGGTCCCGAACTGTGCGT 62.310 66.667 7.51 0.00 0.00 5.24
134 135 4.717313 GGGGGTCCCGAACTGTGC 62.717 72.222 0.48 0.00 36.85 4.57
143 144 0.540133 GATCTCGAGTAGGGGGTCCC 60.540 65.000 13.13 0.00 45.90 4.46
144 145 0.540133 GGATCTCGAGTAGGGGGTCC 60.540 65.000 13.13 0.00 0.00 4.46
145 146 0.890090 CGGATCTCGAGTAGGGGGTC 60.890 65.000 13.13 0.00 42.43 4.46
146 147 1.150992 CGGATCTCGAGTAGGGGGT 59.849 63.158 13.13 0.00 42.43 4.95
147 148 2.269529 GCGGATCTCGAGTAGGGGG 61.270 68.421 13.13 0.00 42.43 5.40
148 149 2.269529 GGCGGATCTCGAGTAGGGG 61.270 68.421 13.13 0.82 42.43 4.79
149 150 2.618219 CGGCGGATCTCGAGTAGGG 61.618 68.421 13.13 2.27 42.43 3.53
150 151 2.618219 CCGGCGGATCTCGAGTAGG 61.618 68.421 24.41 1.90 42.43 3.18
151 152 1.445716 AACCGGCGGATCTCGAGTAG 61.446 60.000 35.78 0.55 42.43 2.57
152 153 1.033746 AAACCGGCGGATCTCGAGTA 61.034 55.000 35.78 0.00 42.43 2.59
153 154 1.885163 AAAACCGGCGGATCTCGAGT 61.885 55.000 35.78 3.72 42.43 4.18
154 155 1.153628 AAAACCGGCGGATCTCGAG 60.154 57.895 35.78 5.93 42.43 4.04
155 156 1.447140 CAAAACCGGCGGATCTCGA 60.447 57.895 35.78 0.00 42.43 4.04
156 157 1.447140 TCAAAACCGGCGGATCTCG 60.447 57.895 35.78 16.34 42.76 4.04
157 158 0.672401 TGTCAAAACCGGCGGATCTC 60.672 55.000 35.78 16.90 0.00 2.75
158 159 0.953960 GTGTCAAAACCGGCGGATCT 60.954 55.000 35.78 13.84 0.00 2.75
159 160 1.500396 GTGTCAAAACCGGCGGATC 59.500 57.895 35.78 9.52 0.00 3.36
160 161 1.969589 GGTGTCAAAACCGGCGGAT 60.970 57.895 35.78 20.37 0.00 4.18
161 162 2.592287 GGTGTCAAAACCGGCGGA 60.592 61.111 35.78 6.54 0.00 5.54
167 168 1.278637 CGCTGTCGGTGTCAAAACC 59.721 57.895 0.00 0.00 36.82 3.27
168 169 4.893241 CGCTGTCGGTGTCAAAAC 57.107 55.556 0.00 0.00 0.00 2.43
178 179 3.589654 ATGGTGTCACCCGCTGTCG 62.590 63.158 19.57 0.00 37.50 4.35
182 183 4.082523 CCGATGGTGTCACCCGCT 62.083 66.667 19.57 4.06 37.50 5.52
188 189 3.399181 GGAGCCCCGATGGTGTCA 61.399 66.667 0.00 0.00 36.04 3.58
310 314 0.249405 CAAAGCAAAGGCCGCAAAGA 60.249 50.000 0.00 0.00 42.56 2.52
370 374 0.404040 GGATCCCAACAACACCCTCA 59.596 55.000 0.00 0.00 0.00 3.86
378 382 0.895100 GTGCAGCAGGATCCCAACAA 60.895 55.000 8.55 0.00 0.00 2.83
381 385 2.202236 GAGGTGCAGCAGGATCCCAA 62.202 60.000 19.63 0.00 0.00 4.12
391 395 3.909086 GAGGTGGTGGAGGTGCAGC 62.909 68.421 8.11 8.11 0.00 5.25
430 434 2.870372 GCTGACGCATGGAACCAC 59.130 61.111 0.00 0.00 35.78 4.16
477 482 1.997874 ATCCCACTGCTCTCCACCC 60.998 63.158 0.00 0.00 0.00 4.61
488 505 1.364328 ACTCTCTTCCTCCATCCCACT 59.636 52.381 0.00 0.00 0.00 4.00
522 547 4.351054 CTGCCCGCCCTGTTTCCT 62.351 66.667 0.00 0.00 0.00 3.36
604 629 3.709653 AGGTTTGTAGGAGTTCAGACACA 59.290 43.478 0.00 0.00 0.00 3.72
660 690 2.721167 CGGTCCCTGAGCAATCCGA 61.721 63.158 0.00 0.00 40.29 4.55
666 696 1.066430 GTTTGTATCGGTCCCTGAGCA 60.066 52.381 0.00 0.00 0.00 4.26
671 701 0.906282 ACGGGTTTGTATCGGTCCCT 60.906 55.000 0.00 0.00 36.30 4.20
685 716 2.556622 CTGAAAGCCATACAAAACGGGT 59.443 45.455 0.00 0.00 0.00 5.28
695 726 1.066430 GTCCGGACACTGAAAGCCATA 60.066 52.381 29.75 0.00 37.60 2.74
726 757 6.848451 TCCTTTAACCGCTCAAATACATTTC 58.152 36.000 0.00 0.00 0.00 2.17
730 761 4.638421 CCATCCTTTAACCGCTCAAATACA 59.362 41.667 0.00 0.00 0.00 2.29
735 766 2.304761 ACTCCATCCTTTAACCGCTCAA 59.695 45.455 0.00 0.00 0.00 3.02
736 767 1.906574 ACTCCATCCTTTAACCGCTCA 59.093 47.619 0.00 0.00 0.00 4.26
781 824 1.378882 CCACATCCACATGGCGAAGG 61.379 60.000 0.00 0.00 33.82 3.46
842 899 1.751437 GCTTGGGTTAGGTAAGCAGG 58.249 55.000 0.00 0.00 44.59 4.85
857 914 2.256461 GGCTTCGTTGGCTGCTTG 59.744 61.111 0.00 0.00 0.00 4.01
901 958 4.257810 TTGGAGACGGGGTGGGGA 62.258 66.667 0.00 0.00 0.00 4.81
1216 1286 2.217038 AGAAGTCGGCCTGGCTCAA 61.217 57.895 19.68 1.10 0.00 3.02
1218 1288 2.125350 CAGAAGTCGGCCTGGCTC 60.125 66.667 19.68 7.74 0.00 4.70
1284 1354 3.279116 GTGTTGAGCTGGCGCACA 61.279 61.111 10.83 3.75 39.10 4.57
1607 2021 7.913674 ATAGAACAAATCAAGAGTTGACCTC 57.086 36.000 16.05 9.46 43.48 3.85
1678 2092 5.920273 AGATTTTATTTGTCAAACAGCCACG 59.080 36.000 0.00 0.00 0.00 4.94
1710 2134 4.960469 ACGGAGGAAGTATATTGGAAGTGA 59.040 41.667 0.00 0.00 0.00 3.41
1719 2143 6.042781 TGCATTTAGGAACGGAGGAAGTATAT 59.957 38.462 0.00 0.00 0.00 0.86
1724 2148 2.985896 TGCATTTAGGAACGGAGGAAG 58.014 47.619 0.00 0.00 0.00 3.46
1727 2151 2.678336 GACTTGCATTTAGGAACGGAGG 59.322 50.000 0.00 0.00 0.00 4.30
1729 2153 3.695830 AGACTTGCATTTAGGAACGGA 57.304 42.857 0.00 0.00 0.00 4.69
1730 2154 4.023193 ACAAAGACTTGCATTTAGGAACGG 60.023 41.667 0.00 0.00 35.84 4.44
1731 2155 5.108385 ACAAAGACTTGCATTTAGGAACG 57.892 39.130 0.00 0.00 35.84 3.95
1732 2156 8.349983 TCTTTACAAAGACTTGCATTTAGGAAC 58.650 33.333 0.22 0.00 39.95 3.62
1733 2157 8.458573 TCTTTACAAAGACTTGCATTTAGGAA 57.541 30.769 0.22 0.00 39.95 3.36
1734 2158 8.635765 ATCTTTACAAAGACTTGCATTTAGGA 57.364 30.769 6.56 0.00 46.80 2.94
1735 2159 9.696917 AAATCTTTACAAAGACTTGCATTTAGG 57.303 29.630 6.56 0.00 46.80 2.69
1738 2162 9.034544 GTGAAATCTTTACAAAGACTTGCATTT 57.965 29.630 6.56 3.16 46.80 2.32
1739 2163 8.416329 AGTGAAATCTTTACAAAGACTTGCATT 58.584 29.630 6.56 3.05 46.80 3.56
1740 2164 7.945134 AGTGAAATCTTTACAAAGACTTGCAT 58.055 30.769 6.56 0.00 46.80 3.96
1741 2165 7.333528 AGTGAAATCTTTACAAAGACTTGCA 57.666 32.000 6.56 5.39 46.80 4.08
1742 2166 9.334693 CATAGTGAAATCTTTACAAAGACTTGC 57.665 33.333 6.56 3.26 46.80 4.01
1743 2167 9.831737 CCATAGTGAAATCTTTACAAAGACTTG 57.168 33.333 6.56 2.82 46.80 3.16
1744 2168 9.793259 TCCATAGTGAAATCTTTACAAAGACTT 57.207 29.630 6.56 2.45 46.80 3.01
1745 2169 9.220767 GTCCATAGTGAAATCTTTACAAAGACT 57.779 33.333 6.56 3.09 46.80 3.24
1746 2170 9.220767 AGTCCATAGTGAAATCTTTACAAAGAC 57.779 33.333 6.56 0.00 46.80 3.01
1753 2177 9.961265 CGTATGTAGTCCATAGTGAAATCTTTA 57.039 33.333 0.00 0.00 36.71 1.85
1754 2178 7.926555 CCGTATGTAGTCCATAGTGAAATCTTT 59.073 37.037 0.00 0.00 36.71 2.52
1755 2179 7.287005 TCCGTATGTAGTCCATAGTGAAATCTT 59.713 37.037 0.00 0.00 36.71 2.40
1756 2180 6.776116 TCCGTATGTAGTCCATAGTGAAATCT 59.224 38.462 0.00 0.00 36.71 2.40
1757 2181 6.978338 TCCGTATGTAGTCCATAGTGAAATC 58.022 40.000 0.00 0.00 36.71 2.17
1758 2182 6.516860 GCTCCGTATGTAGTCCATAGTGAAAT 60.517 42.308 0.00 0.00 36.71 2.17
1759 2183 5.221185 GCTCCGTATGTAGTCCATAGTGAAA 60.221 44.000 0.00 0.00 36.71 2.69
1760 2184 4.277672 GCTCCGTATGTAGTCCATAGTGAA 59.722 45.833 0.00 0.00 36.71 3.18
1761 2185 3.819337 GCTCCGTATGTAGTCCATAGTGA 59.181 47.826 0.00 0.00 36.71 3.41
1762 2186 3.568430 TGCTCCGTATGTAGTCCATAGTG 59.432 47.826 0.00 0.00 36.71 2.74
1763 2187 3.828921 TGCTCCGTATGTAGTCCATAGT 58.171 45.455 0.00 0.00 36.71 2.12
1764 2188 4.848562 TTGCTCCGTATGTAGTCCATAG 57.151 45.455 0.00 0.00 36.71 2.23
1765 2189 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
1766 2190 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
1767 2191 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
1768 2192 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
1769 2193 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
1770 2194 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
1771 2195 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
1772 2196 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
1773 2197 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
1774 2198 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
1775 2199 4.576463 GGATTCACTCATTTTGCTCCGTAT 59.424 41.667 0.00 0.00 0.00 3.06
1776 2200 3.938963 GGATTCACTCATTTTGCTCCGTA 59.061 43.478 0.00 0.00 0.00 4.02
1777 2201 2.749621 GGATTCACTCATTTTGCTCCGT 59.250 45.455 0.00 0.00 0.00 4.69
1778 2202 2.749076 TGGATTCACTCATTTTGCTCCG 59.251 45.455 0.00 0.00 0.00 4.63
1779 2203 4.996788 ATGGATTCACTCATTTTGCTCC 57.003 40.909 0.00 0.00 0.00 4.70
1780 2204 6.317140 TGAGTATGGATTCACTCATTTTGCTC 59.683 38.462 0.44 0.00 44.70 4.26
1781 2205 6.182627 TGAGTATGGATTCACTCATTTTGCT 58.817 36.000 0.44 0.00 44.70 3.91
1782 2206 6.441093 TGAGTATGGATTCACTCATTTTGC 57.559 37.500 0.44 0.00 44.70 3.68
1789 2213 6.441093 TGCATTTTGAGTATGGATTCACTC 57.559 37.500 0.00 0.00 41.31 3.51
1790 2214 6.832384 AGATGCATTTTGAGTATGGATTCACT 59.168 34.615 0.00 0.00 34.69 3.41
1791 2215 7.035840 AGATGCATTTTGAGTATGGATTCAC 57.964 36.000 0.00 0.00 34.69 3.18
1792 2216 8.929260 ATAGATGCATTTTGAGTATGGATTCA 57.071 30.769 0.00 0.00 34.69 2.57
1800 2224 9.586435 CGGATGTATATAGATGCATTTTGAGTA 57.414 33.333 11.19 0.00 38.38 2.59
1801 2225 8.097038 ACGGATGTATATAGATGCATTTTGAGT 58.903 33.333 11.19 0.00 38.38 3.41
1802 2226 8.484641 ACGGATGTATATAGATGCATTTTGAG 57.515 34.615 11.19 0.00 38.38 3.02
1805 2229 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
1806 2230 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
1807 2231 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
1808 2232 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
1809 2233 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
1810 2234 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
1811 2235 8.466798 TGAACCACATACGGATGTATATAGATG 58.533 37.037 14.23 0.00 44.82 2.90
1812 2236 8.589701 TGAACCACATACGGATGTATATAGAT 57.410 34.615 14.23 0.00 44.82 1.98
1813 2237 8.589701 ATGAACCACATACGGATGTATATAGA 57.410 34.615 14.23 0.00 44.82 1.98
1814 2238 9.952188 CTATGAACCACATACGGATGTATATAG 57.048 37.037 14.23 12.28 44.82 1.31
1815 2239 9.470399 ACTATGAACCACATACGGATGTATATA 57.530 33.333 14.23 7.10 44.82 0.86
1816 2240 8.251026 CACTATGAACCACATACGGATGTATAT 58.749 37.037 14.23 1.68 44.82 0.86
1817 2241 7.309560 CCACTATGAACCACATACGGATGTATA 60.310 40.741 14.23 6.48 44.82 1.47
1818 2242 6.455647 CACTATGAACCACATACGGATGTAT 58.544 40.000 14.23 5.54 44.82 2.29
1819 2243 5.221362 CCACTATGAACCACATACGGATGTA 60.221 44.000 14.23 0.00 44.82 2.29
1821 2245 4.058124 CCACTATGAACCACATACGGATG 58.942 47.826 5.94 5.94 40.07 3.51
1822 2246 3.964688 TCCACTATGAACCACATACGGAT 59.035 43.478 0.00 0.00 40.07 4.18
1823 2247 3.367321 TCCACTATGAACCACATACGGA 58.633 45.455 0.00 0.00 40.07 4.69
1824 2248 3.812156 TCCACTATGAACCACATACGG 57.188 47.619 0.00 0.00 40.07 4.02
1825 2249 5.601662 AGATTCCACTATGAACCACATACG 58.398 41.667 0.00 0.00 40.07 3.06
1826 2250 6.821388 AGAGATTCCACTATGAACCACATAC 58.179 40.000 0.00 0.00 40.07 2.39
1827 2251 7.563556 TGTAGAGATTCCACTATGAACCACATA 59.436 37.037 0.00 0.00 40.07 2.29
1828 2252 5.965033 AGAGATTCCACTATGAACCACAT 57.035 39.130 0.00 0.00 42.39 3.21
1829 2253 5.719563 TGTAGAGATTCCACTATGAACCACA 59.280 40.000 0.00 0.00 0.00 4.17
1830 2254 6.222038 TGTAGAGATTCCACTATGAACCAC 57.778 41.667 0.00 0.00 0.00 4.16
1831 2255 6.867519 TTGTAGAGATTCCACTATGAACCA 57.132 37.500 0.00 0.00 0.00 3.67
1832 2256 7.492994 GTCTTTGTAGAGATTCCACTATGAACC 59.507 40.741 0.00 0.00 0.00 3.62
1833 2257 8.254508 AGTCTTTGTAGAGATTCCACTATGAAC 58.745 37.037 0.00 0.00 0.00 3.18
1834 2258 8.367660 AGTCTTTGTAGAGATTCCACTATGAA 57.632 34.615 0.00 0.00 0.00 2.57
1835 2259 7.962995 AGTCTTTGTAGAGATTCCACTATGA 57.037 36.000 0.00 0.00 0.00 2.15
1851 2275 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
1852 2276 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
1853 2277 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1854 2278 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1855 2279 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1856 2280 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1857 2281 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1858 2282 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1859 2283 8.731591 ATTACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
1860 2284 8.731591 AATTACTCCCTCCGTTCCTAAATATA 57.268 34.615 0.00 0.00 0.00 0.86
1861 2285 7.628501 AATTACTCCCTCCGTTCCTAAATAT 57.371 36.000 0.00 0.00 0.00 1.28
1862 2286 7.092757 ACAAATTACTCCCTCCGTTCCTAAATA 60.093 37.037 0.00 0.00 0.00 1.40
1863 2287 5.970501 AATTACTCCCTCCGTTCCTAAAT 57.029 39.130 0.00 0.00 0.00 1.40
1864 2288 5.013391 ACAAATTACTCCCTCCGTTCCTAAA 59.987 40.000 0.00 0.00 0.00 1.85
1865 2289 4.533311 ACAAATTACTCCCTCCGTTCCTAA 59.467 41.667 0.00 0.00 0.00 2.69
1866 2290 4.098894 ACAAATTACTCCCTCCGTTCCTA 58.901 43.478 0.00 0.00 0.00 2.94
1867 2291 2.910977 ACAAATTACTCCCTCCGTTCCT 59.089 45.455 0.00 0.00 0.00 3.36
1868 2292 3.345508 ACAAATTACTCCCTCCGTTCC 57.654 47.619 0.00 0.00 0.00 3.62
1869 2293 4.155462 GGAAACAAATTACTCCCTCCGTTC 59.845 45.833 0.00 0.00 0.00 3.95
1870 2294 4.077108 GGAAACAAATTACTCCCTCCGTT 58.923 43.478 0.00 0.00 0.00 4.44
1871 2295 3.560668 GGGAAACAAATTACTCCCTCCGT 60.561 47.826 0.00 0.00 43.74 4.69
1872 2296 3.014623 GGGAAACAAATTACTCCCTCCG 58.985 50.000 0.00 0.00 43.74 4.63
1876 2300 5.077564 ACAGAAGGGAAACAAATTACTCCC 58.922 41.667 0.00 0.00 46.94 4.30
1877 2301 6.447162 CAACAGAAGGGAAACAAATTACTCC 58.553 40.000 0.00 0.00 0.00 3.85
1878 2302 5.920840 GCAACAGAAGGGAAACAAATTACTC 59.079 40.000 0.00 0.00 0.00 2.59
1879 2303 5.362430 TGCAACAGAAGGGAAACAAATTACT 59.638 36.000 0.00 0.00 0.00 2.24
1880 2304 5.596845 TGCAACAGAAGGGAAACAAATTAC 58.403 37.500 0.00 0.00 0.00 1.89
1952 2376 3.482156 AGAATAGCCTCACATTCGCAT 57.518 42.857 0.00 0.00 36.48 4.73
1957 2381 9.851686 TGACAAATATTAGAATAGCCTCACATT 57.148 29.630 0.00 0.00 0.00 2.71
2170 2594 2.680312 TGAGCCTCTCAATTTCCTCG 57.320 50.000 0.00 0.00 37.57 4.63
2209 2633 6.619801 TTCTTCCTTTCAAGCTGTAACTTC 57.380 37.500 0.00 0.00 0.00 3.01
2345 2769 7.375834 TCAGATTGTTCTACGAAGCTAGAAAA 58.624 34.615 0.00 0.00 34.09 2.29
2377 2801 1.065782 GGCAGTCTCCTCTTCTTTCCC 60.066 57.143 0.00 0.00 0.00 3.97
2423 2847 1.978580 CTGGTTCCCCTGAGTACTTGT 59.021 52.381 0.00 0.00 31.55 3.16
2638 3062 4.704103 AGGGGCTCACTCTCCGCA 62.704 66.667 0.00 0.00 37.72 5.69
2639 3063 3.844090 GAGGGGCTCACTCTCCGC 61.844 72.222 0.00 0.00 35.75 5.54
2640 3064 3.151022 GGAGGGGCTCACTCTCCG 61.151 72.222 0.00 0.00 37.85 4.63
2641 3065 0.985490 AATGGAGGGGCTCACTCTCC 60.985 60.000 6.32 6.32 45.36 3.71
2642 3066 0.467804 GAATGGAGGGGCTCACTCTC 59.532 60.000 4.72 0.00 35.34 3.20
2643 3067 0.252881 TGAATGGAGGGGCTCACTCT 60.253 55.000 4.72 0.00 35.34 3.24
2644 3068 0.842635 ATGAATGGAGGGGCTCACTC 59.157 55.000 0.00 0.00 31.08 3.51
2645 3069 0.842635 GATGAATGGAGGGGCTCACT 59.157 55.000 0.00 0.00 31.08 3.41
2646 3070 0.842635 AGATGAATGGAGGGGCTCAC 59.157 55.000 0.00 0.00 31.08 3.51
2647 3071 0.841961 CAGATGAATGGAGGGGCTCA 59.158 55.000 0.00 0.00 31.08 4.26
2648 3072 0.536915 GCAGATGAATGGAGGGGCTC 60.537 60.000 0.00 0.00 0.00 4.70
2649 3073 1.535685 GCAGATGAATGGAGGGGCT 59.464 57.895 0.00 0.00 0.00 5.19
2650 3074 1.895707 CGCAGATGAATGGAGGGGC 60.896 63.158 0.00 0.00 0.00 5.80
2651 3075 1.228063 CCGCAGATGAATGGAGGGG 60.228 63.158 0.00 0.00 0.00 4.79
2652 3076 0.250209 CTCCGCAGATGAATGGAGGG 60.250 60.000 0.00 0.00 43.45 4.30
2653 3077 0.755079 TCTCCGCAGATGAATGGAGG 59.245 55.000 7.23 0.00 46.42 4.30
2655 3079 1.137675 CACTCTCCGCAGATGAATGGA 59.862 52.381 0.00 0.00 0.00 3.41
2656 3080 1.137675 TCACTCTCCGCAGATGAATGG 59.862 52.381 0.00 0.00 0.00 3.16
2657 3081 2.471818 CTCACTCTCCGCAGATGAATG 58.528 52.381 0.00 0.00 0.00 2.67
2658 3082 1.202510 GCTCACTCTCCGCAGATGAAT 60.203 52.381 0.00 0.00 0.00 2.57
2659 3083 0.174389 GCTCACTCTCCGCAGATGAA 59.826 55.000 0.00 0.00 0.00 2.57
2660 3084 1.670949 GGCTCACTCTCCGCAGATGA 61.671 60.000 0.00 0.00 0.00 2.92
2661 3085 1.227205 GGCTCACTCTCCGCAGATG 60.227 63.158 0.00 0.00 0.00 2.90
2662 3086 2.430610 GGGCTCACTCTCCGCAGAT 61.431 63.158 0.00 0.00 0.00 2.90
2663 3087 3.071206 GGGCTCACTCTCCGCAGA 61.071 66.667 0.00 0.00 0.00 4.26
2664 3088 4.154347 GGGGCTCACTCTCCGCAG 62.154 72.222 0.00 0.00 35.61 5.18
2667 3091 2.025767 CTCATGGGGCTCACTCTCCG 62.026 65.000 0.00 0.00 0.00 4.63
2683 3107 1.191489 TGGACGGAGGTGATTGCTCA 61.191 55.000 0.00 0.00 0.00 4.26
2685 3109 0.107508 CATGGACGGAGGTGATTGCT 60.108 55.000 0.00 0.00 0.00 3.91
3284 3714 5.005971 GTGTCTGAACGTGTAGCTAACAAAA 59.994 40.000 0.00 0.00 40.63 2.44
3318 3748 8.229811 CACAAATCTGAAAAATATCACGAGTCA 58.770 33.333 0.00 0.00 0.00 3.41
3333 3763 6.071672 TGTCACAAAAGAACCACAAATCTGAA 60.072 34.615 0.00 0.00 0.00 3.02
3496 3942 9.590828 TCAAATGAACCATGGACATAATATCAT 57.409 29.630 21.47 11.05 0.00 2.45
3503 3949 7.959658 AGAAATCAAATGAACCATGGACATA 57.040 32.000 21.47 9.06 0.00 2.29
3506 3952 5.349543 GCAAGAAATCAAATGAACCATGGAC 59.650 40.000 21.47 12.58 0.00 4.02
3507 3953 5.481105 GCAAGAAATCAAATGAACCATGGA 58.519 37.500 21.47 0.00 0.00 3.41
3508 3954 4.327898 CGCAAGAAATCAAATGAACCATGG 59.672 41.667 11.19 11.19 43.02 3.66
3509 3955 4.925054 ACGCAAGAAATCAAATGAACCATG 59.075 37.500 0.00 0.00 43.62 3.66
3510 3956 5.138125 ACGCAAGAAATCAAATGAACCAT 57.862 34.783 0.00 0.00 43.62 3.55
3511 3957 4.582701 ACGCAAGAAATCAAATGAACCA 57.417 36.364 0.00 0.00 43.62 3.67
3522 3968 3.187478 CGATGACACAACGCAAGAAAT 57.813 42.857 0.00 0.00 43.62 2.17
3555 4001 3.441290 CAGGAGCAGGCAAGCAGC 61.441 66.667 4.78 0.00 44.65 5.25
3556 4002 1.745864 CTCAGGAGCAGGCAAGCAG 60.746 63.158 4.78 0.00 36.85 4.24
3557 4003 2.350134 CTCAGGAGCAGGCAAGCA 59.650 61.111 4.78 0.00 36.85 3.91
3558 4004 2.438075 CCTCAGGAGCAGGCAAGC 60.438 66.667 0.00 0.00 0.00 4.01
3563 4009 0.251077 ACAAAAGCCTCAGGAGCAGG 60.251 55.000 0.00 0.00 0.00 4.85
3564 4010 0.879765 CACAAAAGCCTCAGGAGCAG 59.120 55.000 0.00 0.00 0.00 4.24
3565 4011 1.174712 GCACAAAAGCCTCAGGAGCA 61.175 55.000 0.00 0.00 0.00 4.26
3566 4012 1.174712 TGCACAAAAGCCTCAGGAGC 61.175 55.000 0.00 0.00 0.00 4.70
3567 4013 1.201647 CATGCACAAAAGCCTCAGGAG 59.798 52.381 0.00 0.00 0.00 3.69
3568 4014 1.250328 CATGCACAAAAGCCTCAGGA 58.750 50.000 0.00 0.00 0.00 3.86
3569 4015 0.245539 CCATGCACAAAAGCCTCAGG 59.754 55.000 0.00 0.00 0.00 3.86
3570 4016 0.389426 GCCATGCACAAAAGCCTCAG 60.389 55.000 0.00 0.00 0.00 3.35
3571 4017 1.667151 GCCATGCACAAAAGCCTCA 59.333 52.632 0.00 0.00 0.00 3.86
3572 4018 1.444895 CGCCATGCACAAAAGCCTC 60.445 57.895 0.00 0.00 0.00 4.70
3573 4019 2.652530 CGCCATGCACAAAAGCCT 59.347 55.556 0.00 0.00 0.00 4.58
3574 4020 3.113979 GCGCCATGCACAAAAGCC 61.114 61.111 0.00 0.00 45.45 4.35
3583 4029 2.125952 GGACAAAAGGCGCCATGC 60.126 61.111 31.54 18.22 45.38 4.06
3584 4030 1.892338 ATGGACAAAAGGCGCCATG 59.108 52.632 31.54 25.33 39.54 3.66
3585 4031 1.606885 CCATGGACAAAAGGCGCCAT 61.607 55.000 31.54 15.82 41.61 4.40
3586 4032 2.274645 CCATGGACAAAAGGCGCCA 61.275 57.895 31.54 4.96 34.45 5.69
3587 4033 2.573340 CCATGGACAAAAGGCGCC 59.427 61.111 21.89 21.89 0.00 6.53
3588 4034 2.125952 GCCATGGACAAAAGGCGC 60.126 61.111 18.40 0.00 37.41 6.53
3590 4036 2.125952 GCGCCATGGACAAAAGGC 60.126 61.111 18.40 2.35 43.61 4.35
3591 4037 1.535204 AAGGCGCCATGGACAAAAGG 61.535 55.000 31.54 0.00 0.00 3.11
3592 4038 0.318120 AAAGGCGCCATGGACAAAAG 59.682 50.000 31.54 0.00 0.00 2.27
3593 4039 0.755686 AAAAGGCGCCATGGACAAAA 59.244 45.000 31.54 0.00 0.00 2.44
3594 4040 0.033228 CAAAAGGCGCCATGGACAAA 59.967 50.000 31.54 0.00 0.00 2.83
3595 4041 1.112315 ACAAAAGGCGCCATGGACAA 61.112 50.000 31.54 0.00 0.00 3.18
3596 4042 1.530419 ACAAAAGGCGCCATGGACA 60.530 52.632 31.54 0.00 0.00 4.02
3597 4043 1.080569 CACAAAAGGCGCCATGGAC 60.081 57.895 31.54 6.25 0.00 4.02
3598 4044 2.929903 GCACAAAAGGCGCCATGGA 61.930 57.895 31.54 0.00 0.00 3.41
3599 4045 2.432972 GCACAAAAGGCGCCATGG 60.433 61.111 31.54 17.40 0.00 3.66
3600 4046 1.079681 ATGCACAAAAGGCGCCATG 60.080 52.632 31.54 25.33 0.00 3.66
3601 4047 1.216178 GATGCACAAAAGGCGCCAT 59.784 52.632 31.54 15.82 0.00 4.40
3602 4048 1.742324 TTGATGCACAAAAGGCGCCA 61.742 50.000 31.54 4.96 35.39 5.69
3603 4049 1.006337 TTGATGCACAAAAGGCGCC 60.006 52.632 21.89 21.89 35.39 6.53
3687 4133 8.190784 CCTTTTGCTGATTTTATTACTACCCTG 58.809 37.037 0.00 0.00 0.00 4.45
3690 4136 9.952188 GATCCTTTTGCTGATTTTATTACTACC 57.048 33.333 0.00 0.00 0.00 3.18
3727 4173 0.393402 CATAGCAACAGGAGCAGGCA 60.393 55.000 0.00 0.00 0.00 4.75
3807 4255 2.520069 CTCCAGTCCTCACACTGTAGT 58.480 52.381 0.22 0.00 42.10 2.73
3808 4256 1.821753 CCTCCAGTCCTCACACTGTAG 59.178 57.143 0.22 0.00 42.10 2.74
3809 4257 1.427753 TCCTCCAGTCCTCACACTGTA 59.572 52.381 0.22 0.00 42.10 2.74
3810 4258 0.188587 TCCTCCAGTCCTCACACTGT 59.811 55.000 0.22 0.00 42.10 3.55
3811 4259 0.894141 CTCCTCCAGTCCTCACACTG 59.106 60.000 0.00 0.00 43.13 3.66
3980 4431 0.605319 AGCGAAAGAAATGTCCGCCA 60.605 50.000 0.00 0.00 46.09 5.69
4043 4494 7.417612 GGATACGATTCACAATTTGCAAGTAT 58.582 34.615 0.00 0.00 0.00 2.12
4097 4549 1.741770 GGGTGAGCGAGCGTTGAAT 60.742 57.895 0.00 0.00 0.00 2.57
4099 4551 4.373116 GGGGTGAGCGAGCGTTGA 62.373 66.667 0.00 0.00 0.00 3.18
4108 4560 1.613925 GGAGAAAACTTTGGGGTGAGC 59.386 52.381 0.00 0.00 0.00 4.26
4109 4561 2.239400 GGGAGAAAACTTTGGGGTGAG 58.761 52.381 0.00 0.00 0.00 3.51
4110 4562 1.477923 CGGGAGAAAACTTTGGGGTGA 60.478 52.381 0.00 0.00 0.00 4.02
4111 4563 0.958822 CGGGAGAAAACTTTGGGGTG 59.041 55.000 0.00 0.00 0.00 4.61
4117 4569 1.165270 CGGATGCGGGAGAAAACTTT 58.835 50.000 0.00 0.00 0.00 2.66
4120 4572 2.761195 GCCGGATGCGGGAGAAAAC 61.761 63.158 27.80 4.49 0.00 2.43
4146 4598 0.657840 GCATGTAGCGTTGGATGACC 59.342 55.000 0.00 0.00 0.00 4.02
4162 4614 1.501169 GCGCTTTGAAAGGTTTGCAT 58.499 45.000 7.09 0.00 0.00 3.96
4170 4622 1.120437 GTTGAACCGCGCTTTGAAAG 58.880 50.000 5.56 0.00 0.00 2.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.