Multiple sequence alignment - TraesCS3B01G322800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G322800 chr3B 100.000 5722 0 0 1 5722 522397819 522392098 0.000000e+00 10567.0
1 TraesCS3B01G322800 chr3B 100.000 28 0 0 5656 5683 85096593 85096566 1.000000e-02 52.8
2 TraesCS3B01G322800 chr3A 90.782 3656 221 54 10 3616 516557127 516553539 0.000000e+00 4778.0
3 TraesCS3B01G322800 chr3A 91.265 1454 104 13 3617 5064 516553508 516552072 0.000000e+00 1960.0
4 TraesCS3B01G322800 chr3A 89.080 174 15 4 5260 5430 516550505 516550333 4.490000e-51 213.0
5 TraesCS3B01G322800 chr3A 87.603 121 8 3 5063 5178 516550714 516550596 3.600000e-27 134.0
6 TraesCS3B01G322800 chr3A 100.000 28 0 0 5656 5683 171176981 171177008 1.000000e-02 52.8
7 TraesCS3B01G322800 chr3D 91.649 3293 171 37 363 3616 397140359 397137132 0.000000e+00 4462.0
8 TraesCS3B01G322800 chr3D 95.174 891 37 4 4187 5075 397136452 397135566 0.000000e+00 1402.0
9 TraesCS3B01G322800 chr3D 92.976 541 24 5 3615 4143 397137102 397136564 0.000000e+00 776.0
10 TraesCS3B01G322800 chr3D 88.608 158 14 4 5260 5414 397109640 397109484 7.570000e-44 189.0
11 TraesCS3B01G322800 chr3D 87.200 125 7 2 5062 5178 397109854 397109731 3.600000e-27 134.0
12 TraesCS3B01G322800 chr3D 87.755 49 6 0 5645 5693 36979721 36979769 2.230000e-04 58.4
13 TraesCS3B01G322800 chr7B 94.737 38 2 0 5644 5681 588069851 588069814 6.190000e-05 60.2
14 TraesCS3B01G322800 chr7B 100.000 28 0 0 5656 5683 227591522 227591495 1.000000e-02 52.8
15 TraesCS3B01G322800 chr5A 94.444 36 2 0 5648 5683 436331763 436331728 8.010000e-04 56.5
16 TraesCS3B01G322800 chr5A 94.444 36 2 0 5648 5683 436331779 436331814 8.010000e-04 56.5
17 TraesCS3B01G322800 chr2B 100.000 28 0 0 5656 5683 18971667 18971694 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G322800 chr3B 522392098 522397819 5721 True 10567.000000 10567 100.000000 1 5722 1 chr3B.!!$R2 5721
1 TraesCS3B01G322800 chr3A 516550333 516557127 6794 True 1771.250000 4778 89.682500 10 5430 4 chr3A.!!$R1 5420
2 TraesCS3B01G322800 chr3D 397135566 397140359 4793 True 2213.333333 4462 93.266333 363 5075 3 chr3D.!!$R2 4712

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
978 994 0.036388 TCCCATTGACACTTCCTCGC 60.036 55.000 0.00 0.00 0.00 5.03 F
1350 1366 0.317103 CGCAGCCGTAGTAGTAGCAG 60.317 60.000 0.00 0.00 0.00 4.24 F
2583 2629 0.461548 AAGGAAGAGCGATCATGCGA 59.538 50.000 2.38 0.00 40.67 5.10 F
3106 3166 1.131126 ACAACACGCTGCATGAATAGC 59.869 47.619 1.44 1.64 36.60 2.97 F
3903 4011 1.165270 GTGTGGTGTGTATGCCCTTC 58.835 55.000 0.00 0.00 0.00 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2963 3023 0.606604 GAGCTACCTGGTGTTTCGGA 59.393 55.000 10.23 0.00 0.00 4.55 R
3092 3152 4.023792 TCAAATTAGGCTATTCATGCAGCG 60.024 41.667 0.00 0.00 38.73 5.18 R
3867 3975 0.994995 CACTTTGAGCAGATCGGTCG 59.005 55.000 10.58 0.00 45.52 4.79 R
4166 4276 1.066454 ACGTTTGGTTTTGTAGGCTGC 59.934 47.619 0.00 0.00 0.00 5.25 R
5173 6723 0.107116 TGTTTAACCGGCCGCCATAT 60.107 50.000 22.85 5.58 0.00 1.78 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 9.857656 AATGAAAGCTCTCCTATGATTTAATGA 57.142 29.630 0.00 0.00 0.00 2.57
88 89 6.801539 TTTGCATCCAACTTACTTACTCAG 57.198 37.500 0.00 0.00 0.00 3.35
89 90 4.832248 TGCATCCAACTTACTTACTCAGG 58.168 43.478 0.00 0.00 0.00 3.86
90 91 4.286032 TGCATCCAACTTACTTACTCAGGT 59.714 41.667 0.00 0.00 0.00 4.00
103 104 3.570912 ACTCAGGTAGACCTAGAGCTC 57.429 52.381 19.60 5.27 46.65 4.09
108 109 6.014771 TCAGGTAGACCTAGAGCTCATTTA 57.985 41.667 17.77 0.00 46.65 1.40
120 121 4.165758 AGAGCTCATTTAAGGAGGCTCATT 59.834 41.667 19.13 19.13 37.68 2.57
122 123 5.372373 AGCTCATTTAAGGAGGCTCATTAC 58.628 41.667 20.15 8.66 32.96 1.89
125 126 5.684704 TCATTTAAGGAGGCTCATTACTGG 58.315 41.667 20.15 12.39 0.00 4.00
129 130 7.446106 TTTAAGGAGGCTCATTACTGGAATA 57.554 36.000 20.15 2.37 0.00 1.75
137 138 7.806180 AGGCTCATTACTGGAATATACAAGTT 58.194 34.615 0.00 0.00 0.00 2.66
138 139 7.716998 AGGCTCATTACTGGAATATACAAGTTG 59.283 37.037 0.00 0.00 0.00 3.16
139 140 7.041098 GGCTCATTACTGGAATATACAAGTTGG 60.041 40.741 7.96 0.00 0.00 3.77
143 144 8.966868 CATTACTGGAATATACAAGTTGGGTTT 58.033 33.333 7.96 0.00 0.00 3.27
176 177 7.335627 TGAAGTTCCCCACTAGTATGTAAATG 58.664 38.462 0.00 0.00 32.94 2.32
191 192 8.753133 AGTATGTAAATGAGACTCATGAACTCA 58.247 33.333 24.57 24.57 43.25 3.41
197 200 8.853077 AAATGAGACTCATGAACTCAACAATA 57.147 30.769 25.50 10.17 42.55 1.90
213 216 9.912634 ACTCAACAATAAAATACAATGAAGTGG 57.087 29.630 0.00 0.00 0.00 4.00
215 218 9.689976 TCAACAATAAAATACAATGAAGTGGTG 57.310 29.630 0.00 0.00 0.00 4.17
226 229 7.341445 ACAATGAAGTGGTGCTACTTTAAAA 57.659 32.000 2.60 0.00 40.78 1.52
276 281 4.837860 AGTGATGTTGTTCCTTCTCTCTCT 59.162 41.667 0.00 0.00 0.00 3.10
277 282 5.047377 AGTGATGTTGTTCCTTCTCTCTCTC 60.047 44.000 0.00 0.00 0.00 3.20
278 283 4.835056 TGATGTTGTTCCTTCTCTCTCTCA 59.165 41.667 0.00 0.00 0.00 3.27
279 284 5.483231 TGATGTTGTTCCTTCTCTCTCTCAT 59.517 40.000 0.00 0.00 0.00 2.90
280 285 5.144692 TGTTGTTCCTTCTCTCTCTCATG 57.855 43.478 0.00 0.00 0.00 3.07
292 297 6.715280 TCTCTCTCTCATGTTTATGCCTTTT 58.285 36.000 0.00 0.00 34.21 2.27
310 315 7.271511 TGCCTTTTTGATACATCTTGTTTTGT 58.728 30.769 0.00 0.00 0.00 2.83
312 317 8.611757 GCCTTTTTGATACATCTTGTTTTGTTT 58.388 29.630 0.00 0.00 0.00 2.83
343 348 6.952605 TGGATCCCTTTTCTCTTCTCTTTA 57.047 37.500 9.90 0.00 0.00 1.85
345 350 7.933223 TGGATCCCTTTTCTCTTCTCTTTATT 58.067 34.615 9.90 0.00 0.00 1.40
347 352 9.249053 GGATCCCTTTTCTCTTCTCTTTATTTT 57.751 33.333 0.00 0.00 0.00 1.82
377 382 1.777461 GTATAATGTCACGTCGTCGCC 59.223 52.381 0.99 0.00 41.18 5.54
385 390 2.254350 CGTCGTCGCCAGAAGTGA 59.746 61.111 0.00 0.00 0.00 3.41
394 399 1.004560 CCAGAAGTGAAGGCAGCGA 60.005 57.895 0.00 0.00 0.00 4.93
404 409 0.106708 AAGGCAGCGAGAAGACAACA 59.893 50.000 0.00 0.00 0.00 3.33
408 413 1.135859 GCAGCGAGAAGACAACATTGG 60.136 52.381 0.00 0.00 0.00 3.16
413 418 2.155732 CGAGAAGACAACATTGGTCACG 59.844 50.000 0.00 0.00 37.74 4.35
419 424 1.152860 AACATTGGTCACGGGTGCA 60.153 52.632 0.00 0.00 0.00 4.57
489 494 2.029828 GCTTCTCCTCTGTCGAACTTCA 60.030 50.000 0.00 0.00 0.00 3.02
498 503 3.574396 TCTGTCGAACTTCACTCCTCATT 59.426 43.478 0.00 0.00 0.00 2.57
499 504 4.765339 TCTGTCGAACTTCACTCCTCATTA 59.235 41.667 0.00 0.00 0.00 1.90
502 512 5.243060 TGTCGAACTTCACTCCTCATTAAGA 59.757 40.000 0.00 0.00 0.00 2.10
527 537 1.206745 AACGACGAACAGTGACTGCG 61.207 55.000 13.37 11.62 34.37 5.18
528 538 1.657487 CGACGAACAGTGACTGCGT 60.657 57.895 16.08 16.08 34.15 5.24
534 544 2.135139 GAACAGTGACTGCGTGATTCA 58.865 47.619 13.37 0.00 34.37 2.57
578 588 0.541998 GGTGGTGGAAAGAAAGGGGG 60.542 60.000 0.00 0.00 0.00 5.40
582 592 1.147191 GGTGGAAAGAAAGGGGGAGTT 59.853 52.381 0.00 0.00 0.00 3.01
589 599 0.187606 GAAAGGGGGAGTTGTTGGGT 59.812 55.000 0.00 0.00 0.00 4.51
594 604 1.612676 GGGGAGTTGTTGGGTTGTAC 58.387 55.000 0.00 0.00 0.00 2.90
595 605 1.232119 GGGAGTTGTTGGGTTGTACG 58.768 55.000 0.00 0.00 0.00 3.67
602 612 1.067084 TTGGGTTGTACGTTCGCGA 59.933 52.632 3.71 3.71 44.71 5.87
607 617 0.386478 GTTGTACGTTCGCGAGGTCT 60.386 55.000 16.66 1.06 44.71 3.85
614 624 0.591741 GTTCGCGAGGTCTGATACGG 60.592 60.000 9.59 0.00 0.00 4.02
627 637 1.202371 TGATACGGGAGCGAACATGTC 60.202 52.381 0.00 0.00 0.00 3.06
628 638 1.067212 GATACGGGAGCGAACATGTCT 59.933 52.381 0.00 0.00 0.00 3.41
634 644 3.004419 CGGGAGCGAACATGTCTAGAATA 59.996 47.826 0.00 0.00 0.00 1.75
676 689 1.399572 CGGCTCGTGTAGATCAATCG 58.600 55.000 0.00 0.00 0.00 3.34
694 707 0.448990 CGGACGGACGAGACAACATA 59.551 55.000 0.00 0.00 35.47 2.29
707 720 5.573282 CGAGACAACATACGTCTTGAATCTT 59.427 40.000 0.00 0.00 44.52 2.40
724 737 9.831737 CTTGAATCTTTAAAAATCAGACGTCAT 57.168 29.630 19.50 0.00 0.00 3.06
743 756 8.348983 ACGTCATATTTTTAGTGATTCCGTAG 57.651 34.615 0.00 0.00 0.00 3.51
756 769 8.234136 AGTGATTCCGTAGTATTTATCTCACA 57.766 34.615 0.00 0.00 33.49 3.58
765 778 8.129211 CGTAGTATTTATCTCACATGACACTCA 58.871 37.037 0.00 0.00 0.00 3.41
778 791 7.769970 TCACATGACACTCATAAAATAGCATCA 59.230 33.333 0.00 0.00 34.28 3.07
792 805 3.448267 CATCATGTGCTCCGACACT 57.552 52.632 0.00 0.00 41.30 3.55
974 990 2.806945 TCCATCCCATTGACACTTCC 57.193 50.000 0.00 0.00 0.00 3.46
975 991 2.278245 TCCATCCCATTGACACTTCCT 58.722 47.619 0.00 0.00 0.00 3.36
976 992 2.239654 TCCATCCCATTGACACTTCCTC 59.760 50.000 0.00 0.00 0.00 3.71
977 993 2.283298 CATCCCATTGACACTTCCTCG 58.717 52.381 0.00 0.00 0.00 4.63
978 994 0.036388 TCCCATTGACACTTCCTCGC 60.036 55.000 0.00 0.00 0.00 5.03
979 995 1.026718 CCCATTGACACTTCCTCGCC 61.027 60.000 0.00 0.00 0.00 5.54
980 996 1.361668 CCATTGACACTTCCTCGCCG 61.362 60.000 0.00 0.00 0.00 6.46
981 997 1.741770 ATTGACACTTCCTCGCCGC 60.742 57.895 0.00 0.00 0.00 6.53
982 998 4.717629 TGACACTTCCTCGCCGCG 62.718 66.667 6.39 6.39 0.00 6.46
1083 1099 1.977544 CGTCTCCCCGACTCCAACT 60.978 63.158 0.00 0.00 40.59 3.16
1126 1142 2.036733 GTCCCCCGTGAATGAATCGATA 59.963 50.000 0.00 0.00 0.00 2.92
1150 1166 5.305902 AGATGATGTCTCAGCTCTCATGAAT 59.694 40.000 0.00 0.00 44.70 2.57
1171 1187 1.001706 CATACATCCACATGCAGCAGC 60.002 52.381 0.00 0.00 42.57 5.25
1347 1363 1.069159 CCATCGCAGCCGTAGTAGTAG 60.069 57.143 0.00 0.00 35.54 2.57
1348 1364 0.592148 ATCGCAGCCGTAGTAGTAGC 59.408 55.000 0.00 0.00 35.54 3.58
1349 1365 0.745486 TCGCAGCCGTAGTAGTAGCA 60.745 55.000 0.00 0.00 35.54 3.49
1350 1366 0.317103 CGCAGCCGTAGTAGTAGCAG 60.317 60.000 0.00 0.00 0.00 4.24
1461 1485 7.492669 GCTAACTGAAGATATATGTGTGTGTGT 59.507 37.037 0.00 0.00 0.00 3.72
1462 1486 7.601073 AACTGAAGATATATGTGTGTGTGTG 57.399 36.000 0.00 0.00 0.00 3.82
1463 1487 6.701340 ACTGAAGATATATGTGTGTGTGTGT 58.299 36.000 0.00 0.00 0.00 3.72
1464 1488 7.836842 ACTGAAGATATATGTGTGTGTGTGTA 58.163 34.615 0.00 0.00 0.00 2.90
1465 1489 8.478066 ACTGAAGATATATGTGTGTGTGTGTAT 58.522 33.333 0.00 0.00 0.00 2.29
1466 1490 8.647143 TGAAGATATATGTGTGTGTGTGTATG 57.353 34.615 0.00 0.00 0.00 2.39
1477 1501 6.256104 GTGTGTGTGTGTATGTAACTTGTGTA 59.744 38.462 0.00 0.00 0.00 2.90
1483 1511 5.872617 TGTGTATGTAACTTGTGTATGCTCC 59.127 40.000 0.00 0.00 0.00 4.70
1531 1559 2.430921 GTGGTCGCGTCAGTGGAG 60.431 66.667 5.77 0.00 0.00 3.86
1633 1661 5.705397 TCATCAAGGATTTGGAGATCAGT 57.295 39.130 0.00 0.00 34.97 3.41
1636 1664 5.503634 TCAAGGATTTGGAGATCAGTGAA 57.496 39.130 0.00 0.00 34.97 3.18
1686 1714 2.099756 TGATCGAATGAGATGCGACAGT 59.900 45.455 0.00 0.00 36.83 3.55
1692 1720 4.504097 CGAATGAGATGCGACAGTGATTAA 59.496 41.667 0.00 0.00 0.00 1.40
1809 1837 0.601311 AGGCAGTTCTCGTGTTCAGC 60.601 55.000 0.00 0.00 0.00 4.26
1864 1892 3.064545 GCATAAGTCAGTGCCAACATCTC 59.935 47.826 0.00 0.00 35.35 2.75
1889 1917 3.134458 GACCACTTATGTCAGCTATGCC 58.866 50.000 0.00 0.00 32.91 4.40
1928 1956 1.800805 AGATCTGCACTTGAACCGTG 58.199 50.000 0.00 0.00 35.53 4.94
1959 1987 6.365789 GCTATTTAAAAGTGCTGTGCAATGAA 59.634 34.615 0.00 0.00 41.47 2.57
1960 1988 5.964887 TTTAAAAGTGCTGTGCAATGAAC 57.035 34.783 0.00 0.00 41.47 3.18
2039 2083 5.237344 ACTCTGAATTTGTGCTGTACAGTTC 59.763 40.000 23.44 17.22 41.10 3.01
2075 2119 2.551270 GTCGTTGCAGCACTTCCG 59.449 61.111 0.00 0.00 0.00 4.30
2081 2125 2.594592 GCAGCACTTCCGTGGGTT 60.595 61.111 0.00 0.00 41.51 4.11
2126 2170 1.674359 CACAACCTGCACAACCAGTA 58.326 50.000 0.00 0.00 0.00 2.74
2294 2339 2.993899 AGTTGGAAAATCTACAGTCGCG 59.006 45.455 0.00 0.00 0.00 5.87
2520 2566 5.181433 AGAAAGCAAAAGTATTCTTCCGACC 59.819 40.000 0.00 0.00 32.90 4.79
2523 2569 3.062234 GCAAAAGTATTCTTCCGACCGAG 59.938 47.826 0.00 0.00 32.90 4.63
2526 2572 5.848833 AAAGTATTCTTCCGACCGAGTAT 57.151 39.130 0.00 0.00 32.90 2.12
2583 2629 0.461548 AAGGAAGAGCGATCATGCGA 59.538 50.000 2.38 0.00 40.67 5.10
2929 2988 9.186323 GTGCATATTATATATCCTAGTGAAGCG 57.814 37.037 0.00 0.00 0.00 4.68
2930 2989 9.131791 TGCATATTATATATCCTAGTGAAGCGA 57.868 33.333 0.00 0.00 0.00 4.93
2963 3023 4.634184 AGCATCTCGAAGTATAACACGT 57.366 40.909 0.00 0.00 0.00 4.49
3041 3101 3.258872 AGCTGGCTTTTATTGATGTTGCA 59.741 39.130 0.00 0.00 0.00 4.08
3051 3111 6.656632 TTATTGATGTTGCAAAGGGTGTTA 57.343 33.333 0.00 0.00 0.00 2.41
3068 3128 5.112686 GGTGTTAGGATGTTCTCTAAGCTG 58.887 45.833 0.00 0.00 0.00 4.24
3094 3154 2.307049 GTGTAATCTTGCACAACACGC 58.693 47.619 6.32 0.00 42.35 5.34
3106 3166 1.131126 ACAACACGCTGCATGAATAGC 59.869 47.619 1.44 1.64 36.60 2.97
3116 3176 5.218139 GCTGCATGAATAGCCTAATTTGAC 58.782 41.667 0.00 0.00 33.89 3.18
3144 3204 3.668447 TCTTCCATTGACTTGTCTCTGC 58.332 45.455 2.35 0.00 0.00 4.26
3273 3333 7.298507 TCAGGCAAGACAAATACGTATTAAC 57.701 36.000 20.62 14.16 0.00 2.01
3316 3376 8.723942 TTTCTCTTGGATAGCTATTGAGTTTC 57.276 34.615 7.87 0.00 0.00 2.78
3444 3509 3.552684 GCTTGCACTTGGCTAAACATGAA 60.553 43.478 0.00 0.00 45.15 2.57
3445 3510 3.641437 TGCACTTGGCTAAACATGAAC 57.359 42.857 0.00 0.00 45.15 3.18
3867 3975 1.300697 AGCAACAGTCCGACGGAAC 60.301 57.895 20.26 12.94 31.38 3.62
3903 4011 1.165270 GTGTGGTGTGTATGCCCTTC 58.835 55.000 0.00 0.00 0.00 3.46
3914 4022 3.721575 TGTATGCCCTTCCCTTATGATGT 59.278 43.478 0.00 0.00 0.00 3.06
3975 4085 9.399403 CCAAAAGCTTAATACAGTTCTCTTTTC 57.601 33.333 0.00 0.00 32.30 2.29
3976 4086 9.950680 CAAAAGCTTAATACAGTTCTCTTTTCA 57.049 29.630 0.00 0.00 32.30 2.69
3978 4088 9.561069 AAAGCTTAATACAGTTCTCTTTTCAGA 57.439 29.630 0.00 0.00 0.00 3.27
3995 4105 5.689383 TTCAGAAAACTAAGTCATGCACC 57.311 39.130 0.00 0.00 0.00 5.01
4010 4120 4.278170 TCATGCACCGTCATTTTTCTCTTT 59.722 37.500 0.00 0.00 0.00 2.52
4015 4125 5.343325 GCACCGTCATTTTTCTCTTTTCATC 59.657 40.000 0.00 0.00 0.00 2.92
4024 4134 9.740239 CATTTTTCTCTTTTCATCTCAGAAACA 57.260 29.630 0.00 0.00 37.24 2.83
4072 4182 9.393249 CGAACATCTAAATGTGTGTTATTTTGT 57.607 29.630 0.00 0.00 45.48 2.83
4097 4207 5.670361 ACTATTAGAAAAGGGCACTGGGATA 59.330 40.000 0.00 0.00 0.00 2.59
4115 4225 3.118592 GGATAGCACAAGTCTTACAGCCT 60.119 47.826 0.00 0.00 0.00 4.58
4122 4232 3.008049 ACAAGTCTTACAGCCTAACCAGG 59.992 47.826 0.00 0.00 45.77 4.45
4127 4237 4.695928 GTCTTACAGCCTAACCAGGAAAAG 59.304 45.833 0.00 0.00 45.91 2.27
4145 4255 6.262496 AGGAAAAGACCGGAACTAAAAGAAAG 59.738 38.462 9.46 0.00 34.73 2.62
4146 4256 6.261603 GGAAAAGACCGGAACTAAAAGAAAGA 59.738 38.462 9.46 0.00 0.00 2.52
4147 4257 7.201758 GGAAAAGACCGGAACTAAAAGAAAGAA 60.202 37.037 9.46 0.00 0.00 2.52
4196 4374 6.937886 ACAAAACCAAACGTAGAACAAAAG 57.062 33.333 0.00 0.00 0.00 2.27
4200 4378 4.263435 ACCAAACGTAGAACAAAAGACCA 58.737 39.130 0.00 0.00 0.00 4.02
4201 4379 4.701171 ACCAAACGTAGAACAAAAGACCAA 59.299 37.500 0.00 0.00 0.00 3.67
4202 4380 5.183522 ACCAAACGTAGAACAAAAGACCAAA 59.816 36.000 0.00 0.00 0.00 3.28
4229 4407 3.453059 ACTGTACAGCTACCCTACAGT 57.547 47.619 22.90 15.10 43.70 3.55
4293 4472 4.735132 CAGAACCTTCGCGCCGGA 62.735 66.667 18.39 0.00 0.00 5.14
4303 4482 2.203070 GCGCCGGATGTCCTCATT 60.203 61.111 5.05 0.00 34.06 2.57
4368 4547 2.270352 TTTTGCAGGACGAATGGACT 57.730 45.000 0.00 0.00 0.00 3.85
4431 4610 0.687757 AGCCTGAAGAGATACGGCCA 60.688 55.000 2.24 0.00 41.60 5.36
4825 5006 4.853196 CCTACAGCGAATTTTGTGTGATTG 59.147 41.667 0.00 0.00 0.00 2.67
4828 5009 5.826586 ACAGCGAATTTTGTGTGATTGTTA 58.173 33.333 0.00 0.00 0.00 2.41
4956 5142 6.159293 TGTGAACTTAAGTGCTCATAGACAG 58.841 40.000 14.83 0.00 0.00 3.51
4957 5143 6.159988 GTGAACTTAAGTGCTCATAGACAGT 58.840 40.000 14.83 0.00 0.00 3.55
4958 5144 7.039993 TGTGAACTTAAGTGCTCATAGACAGTA 60.040 37.037 14.83 0.00 0.00 2.74
4959 5145 7.976734 GTGAACTTAAGTGCTCATAGACAGTAT 59.023 37.037 14.83 0.00 0.00 2.12
4960 5146 9.185680 TGAACTTAAGTGCTCATAGACAGTATA 57.814 33.333 14.83 0.00 0.00 1.47
4978 5164 9.383519 GACAGTATATTTCAGTTGGATTCAGAA 57.616 33.333 0.00 0.00 0.00 3.02
5019 5206 7.227156 AGACATGAACACCTATCTCACTTTTT 58.773 34.615 0.00 0.00 0.00 1.94
5020 5207 7.389053 AGACATGAACACCTATCTCACTTTTTC 59.611 37.037 0.00 0.00 0.00 2.29
5021 5208 6.998074 ACATGAACACCTATCTCACTTTTTCA 59.002 34.615 0.00 0.00 0.00 2.69
5022 5209 7.173907 ACATGAACACCTATCTCACTTTTTCAG 59.826 37.037 0.00 0.00 0.00 3.02
5023 5210 6.591935 TGAACACCTATCTCACTTTTTCAGT 58.408 36.000 0.00 0.00 35.35 3.41
5034 5221 4.848757 CACTTTTTCAGTGCAGAACTACC 58.151 43.478 0.00 0.00 46.70 3.18
5042 5229 3.499918 CAGTGCAGAACTACCCAAAGAAG 59.500 47.826 0.00 0.00 36.83 2.85
5125 6671 6.998802 AGTTCATATAACCTACCATCTGAGC 58.001 40.000 0.00 0.00 0.00 4.26
5126 6672 6.784969 AGTTCATATAACCTACCATCTGAGCT 59.215 38.462 0.00 0.00 0.00 4.09
5127 6673 7.291182 AGTTCATATAACCTACCATCTGAGCTT 59.709 37.037 0.00 0.00 0.00 3.74
5128 6674 6.997655 TCATATAACCTACCATCTGAGCTTG 58.002 40.000 0.00 0.00 0.00 4.01
5157 6707 7.039504 AGCATTCAAAGTTGTAAATCCTCATGT 60.040 33.333 0.00 0.00 0.00 3.21
5158 6708 7.274250 GCATTCAAAGTTGTAAATCCTCATGTC 59.726 37.037 0.00 0.00 0.00 3.06
5171 6721 6.875972 ATCCTCATGTCTTTACAGTAAGGT 57.124 37.500 2.57 0.00 39.49 3.50
5172 6722 6.681729 TCCTCATGTCTTTACAGTAAGGTT 57.318 37.500 2.57 0.00 39.49 3.50
5173 6723 7.786046 TCCTCATGTCTTTACAGTAAGGTTA 57.214 36.000 2.57 0.00 39.49 2.85
5174 6724 8.375493 TCCTCATGTCTTTACAGTAAGGTTAT 57.625 34.615 2.57 0.00 39.49 1.89
5175 6725 9.483489 TCCTCATGTCTTTACAGTAAGGTTATA 57.517 33.333 2.57 0.00 39.49 0.98
5179 6729 8.774586 CATGTCTTTACAGTAAGGTTATATGGC 58.225 37.037 2.57 0.00 39.49 4.40
5180 6730 6.982141 TGTCTTTACAGTAAGGTTATATGGCG 59.018 38.462 2.57 0.00 0.00 5.69
5181 6731 6.423001 GTCTTTACAGTAAGGTTATATGGCGG 59.577 42.308 2.57 0.00 0.00 6.13
5182 6732 3.121738 ACAGTAAGGTTATATGGCGGC 57.878 47.619 0.00 0.00 0.00 6.53
5183 6733 2.224450 ACAGTAAGGTTATATGGCGGCC 60.224 50.000 13.32 13.32 0.00 6.13
5184 6734 1.001633 AGTAAGGTTATATGGCGGCCG 59.998 52.381 24.05 24.05 0.00 6.13
5185 6735 0.322322 TAAGGTTATATGGCGGCCGG 59.678 55.000 29.38 8.95 0.00 6.13
5186 6736 1.702022 AAGGTTATATGGCGGCCGGT 61.702 55.000 29.38 8.28 0.00 5.28
5187 6737 1.228033 GGTTATATGGCGGCCGGTT 60.228 57.895 29.38 4.30 0.00 4.44
5188 6738 0.035176 GGTTATATGGCGGCCGGTTA 59.965 55.000 29.38 6.57 0.00 2.85
5189 6739 1.542987 GGTTATATGGCGGCCGGTTAA 60.543 52.381 29.38 8.71 0.00 2.01
5190 6740 2.220313 GTTATATGGCGGCCGGTTAAA 58.780 47.619 29.38 2.05 0.00 1.52
5191 6741 1.881591 TATATGGCGGCCGGTTAAAC 58.118 50.000 29.38 8.67 0.00 2.01
5192 6742 0.107116 ATATGGCGGCCGGTTAAACA 60.107 50.000 29.38 0.08 0.00 2.83
5193 6743 1.025647 TATGGCGGCCGGTTAAACAC 61.026 55.000 29.38 6.97 0.00 3.32
5194 6744 2.670592 GGCGGCCGGTTAAACACT 60.671 61.111 29.38 0.00 0.00 3.55
5195 6745 2.683859 GGCGGCCGGTTAAACACTC 61.684 63.158 29.38 5.28 0.00 3.51
5196 6746 1.670083 GCGGCCGGTTAAACACTCT 60.670 57.895 29.38 0.00 0.00 3.24
5197 6747 1.232621 GCGGCCGGTTAAACACTCTT 61.233 55.000 29.38 0.00 0.00 2.85
5198 6748 1.940752 GCGGCCGGTTAAACACTCTTA 60.941 52.381 29.38 0.00 0.00 2.10
5199 6749 2.415776 CGGCCGGTTAAACACTCTTAA 58.584 47.619 20.10 0.00 0.00 1.85
5200 6750 3.004862 CGGCCGGTTAAACACTCTTAAT 58.995 45.455 20.10 0.00 0.00 1.40
5201 6751 4.183101 CGGCCGGTTAAACACTCTTAATA 58.817 43.478 20.10 0.00 0.00 0.98
5202 6752 4.269363 CGGCCGGTTAAACACTCTTAATAG 59.731 45.833 20.10 0.00 0.00 1.73
5208 6758 8.225777 CCGGTTAAACACTCTTAATAGTTCAAC 58.774 37.037 0.00 0.00 0.00 3.18
5230 6780 4.355287 ACAAGGAGAAGAAAGGAAAGGGAT 59.645 41.667 0.00 0.00 0.00 3.85
5241 6791 8.855804 AGAAAGGAAAGGGATACAGTAATAGA 57.144 34.615 0.00 0.00 39.74 1.98
5242 6792 9.280456 AGAAAGGAAAGGGATACAGTAATAGAA 57.720 33.333 0.00 0.00 39.74 2.10
5246 6796 8.487028 AGGAAAGGGATACAGTAATAGAAACAG 58.513 37.037 0.00 0.00 39.74 3.16
5250 6800 8.240267 AGGGATACAGTAATAGAAACAGAGAC 57.760 38.462 0.00 0.00 39.74 3.36
5262 6812 4.209288 AGAAACAGAGACGACAAATTGACG 59.791 41.667 15.34 15.34 41.00 4.35
5269 6855 3.313274 ACGACAAATTGACGTGTTCAC 57.687 42.857 20.81 0.00 45.75 3.18
5286 6872 2.124736 CCACCCACGGCCTACATG 60.125 66.667 0.00 0.00 0.00 3.21
5324 6910 1.959226 GTGCAAGAGACGGCCGAAA 60.959 57.895 35.90 4.37 0.00 3.46
5346 6932 5.803020 AGAGTTGCGGATGAATTTCTTAC 57.197 39.130 0.00 0.00 0.00 2.34
5347 6933 5.245531 AGAGTTGCGGATGAATTTCTTACA 58.754 37.500 0.00 0.00 0.00 2.41
5355 6941 6.701841 GCGGATGAATTTCTTACATCACTCTA 59.298 38.462 0.00 0.00 41.17 2.43
5433 7019 3.395702 ACTTGACCGGCCGCCATA 61.396 61.111 22.85 9.53 0.00 2.74
5434 7020 2.111043 CTTGACCGGCCGCCATAT 59.889 61.111 22.85 0.95 0.00 1.78
5435 7021 1.525995 CTTGACCGGCCGCCATATT 60.526 57.895 22.85 0.00 0.00 1.28
5436 7022 1.507141 CTTGACCGGCCGCCATATTC 61.507 60.000 22.85 8.80 0.00 1.75
5437 7023 2.110213 GACCGGCCGCCATATTCA 59.890 61.111 22.85 0.00 0.00 2.57
5438 7024 1.525077 GACCGGCCGCCATATTCAA 60.525 57.895 22.85 0.00 0.00 2.69
5439 7025 1.782028 GACCGGCCGCCATATTCAAC 61.782 60.000 22.85 0.00 0.00 3.18
5440 7026 1.821759 CCGGCCGCCATATTCAACA 60.822 57.895 22.85 0.00 0.00 3.33
5441 7027 1.648720 CGGCCGCCATATTCAACAG 59.351 57.895 14.67 0.00 0.00 3.16
5442 7028 1.095228 CGGCCGCCATATTCAACAGT 61.095 55.000 14.67 0.00 0.00 3.55
5443 7029 1.808512 CGGCCGCCATATTCAACAGTA 60.809 52.381 14.67 0.00 0.00 2.74
5444 7030 1.602377 GGCCGCCATATTCAACAGTAC 59.398 52.381 3.91 0.00 0.00 2.73
5445 7031 2.561569 GCCGCCATATTCAACAGTACT 58.438 47.619 0.00 0.00 0.00 2.73
5446 7032 2.544267 GCCGCCATATTCAACAGTACTC 59.456 50.000 0.00 0.00 0.00 2.59
5447 7033 3.131396 CCGCCATATTCAACAGTACTCC 58.869 50.000 0.00 0.00 0.00 3.85
5448 7034 3.131396 CGCCATATTCAACAGTACTCCC 58.869 50.000 0.00 0.00 0.00 4.30
5449 7035 3.477530 GCCATATTCAACAGTACTCCCC 58.522 50.000 0.00 0.00 0.00 4.81
5450 7036 3.747708 GCCATATTCAACAGTACTCCCCC 60.748 52.174 0.00 0.00 0.00 5.40
5451 7037 3.458118 CCATATTCAACAGTACTCCCCCA 59.542 47.826 0.00 0.00 0.00 4.96
5452 7038 4.444876 CCATATTCAACAGTACTCCCCCAG 60.445 50.000 0.00 0.00 0.00 4.45
5453 7039 2.112279 TTCAACAGTACTCCCCCAGT 57.888 50.000 0.00 0.00 39.41 4.00
5454 7040 3.263369 TTCAACAGTACTCCCCCAGTA 57.737 47.619 0.00 0.00 36.43 2.74
5455 7041 3.263369 TCAACAGTACTCCCCCAGTAA 57.737 47.619 0.00 0.00 39.44 2.24
5456 7042 3.589641 TCAACAGTACTCCCCCAGTAAA 58.410 45.455 0.00 0.00 39.44 2.01
5457 7043 3.581332 TCAACAGTACTCCCCCAGTAAAG 59.419 47.826 0.00 0.00 39.44 1.85
5458 7044 3.555117 ACAGTACTCCCCCAGTAAAGA 57.445 47.619 0.00 0.00 39.44 2.52
5459 7045 3.442076 ACAGTACTCCCCCAGTAAAGAG 58.558 50.000 0.00 0.00 39.44 2.85
5460 7046 3.077088 ACAGTACTCCCCCAGTAAAGAGA 59.923 47.826 0.00 0.00 39.44 3.10
5461 7047 4.264895 ACAGTACTCCCCCAGTAAAGAGAT 60.265 45.833 0.00 0.00 39.44 2.75
5462 7048 5.043582 ACAGTACTCCCCCAGTAAAGAGATA 60.044 44.000 0.00 0.00 39.44 1.98
5463 7049 6.078664 CAGTACTCCCCCAGTAAAGAGATAT 58.921 44.000 0.00 0.00 39.44 1.63
5464 7050 7.146997 ACAGTACTCCCCCAGTAAAGAGATATA 60.147 40.741 0.00 0.00 39.44 0.86
5465 7051 7.728981 CAGTACTCCCCCAGTAAAGAGATATAA 59.271 40.741 0.00 0.00 39.44 0.98
5466 7052 7.951245 AGTACTCCCCCAGTAAAGAGATATAAG 59.049 40.741 0.00 0.00 39.44 1.73
5467 7053 6.085416 ACTCCCCCAGTAAAGAGATATAAGG 58.915 44.000 0.00 0.00 31.37 2.69
5468 7054 5.412384 TCCCCCAGTAAAGAGATATAAGGG 58.588 45.833 0.00 0.00 0.00 3.95
5469 7055 5.102346 TCCCCCAGTAAAGAGATATAAGGGT 60.102 44.000 0.00 0.00 31.82 4.34
5470 7056 5.013183 CCCCCAGTAAAGAGATATAAGGGTG 59.987 48.000 0.00 0.00 31.82 4.61
5471 7057 5.607171 CCCCAGTAAAGAGATATAAGGGTGT 59.393 44.000 0.00 0.00 31.82 4.16
5472 7058 6.101296 CCCCAGTAAAGAGATATAAGGGTGTT 59.899 42.308 0.00 0.00 31.82 3.32
5473 7059 7.366551 CCCCAGTAAAGAGATATAAGGGTGTTT 60.367 40.741 0.00 0.00 31.82 2.83
5474 7060 8.711170 CCCAGTAAAGAGATATAAGGGTGTTTA 58.289 37.037 0.00 0.00 0.00 2.01
5480 7066 8.803397 AAGAGATATAAGGGTGTTTAAACCAC 57.197 34.615 15.59 12.67 42.47 4.16
5481 7067 8.159229 AGAGATATAAGGGTGTTTAAACCACT 57.841 34.615 15.59 10.29 42.47 4.00
5482 7068 9.275572 AGAGATATAAGGGTGTTTAAACCACTA 57.724 33.333 15.59 0.24 42.47 2.74
5483 7069 9.895138 GAGATATAAGGGTGTTTAAACCACTAA 57.105 33.333 15.59 4.22 42.47 2.24
5488 7074 7.812690 AAGGGTGTTTAAACCACTAAAGTAG 57.187 36.000 15.59 0.00 42.47 2.57
5489 7075 6.903516 AGGGTGTTTAAACCACTAAAGTAGT 58.096 36.000 15.59 0.00 42.47 2.73
5490 7076 8.033178 AGGGTGTTTAAACCACTAAAGTAGTA 57.967 34.615 15.59 0.00 42.47 1.82
5491 7077 8.663167 AGGGTGTTTAAACCACTAAAGTAGTAT 58.337 33.333 15.59 0.00 42.47 2.12
5492 7078 9.942850 GGGTGTTTAAACCACTAAAGTAGTATA 57.057 33.333 15.59 0.00 42.47 1.47
5526 7112 9.716531 ACAAAGGAAGTAGTTATTAGTAACCAC 57.283 33.333 4.64 2.01 40.88 4.16
5527 7113 9.715121 CAAAGGAAGTAGTTATTAGTAACCACA 57.285 33.333 8.85 0.00 40.88 4.17
5544 7130 9.847224 AGTAACCACATTAGATTATTTAGGGTG 57.153 33.333 0.00 0.00 0.00 4.61
5545 7131 9.841295 GTAACCACATTAGATTATTTAGGGTGA 57.159 33.333 0.00 0.00 0.00 4.02
5546 7132 8.747538 AACCACATTAGATTATTTAGGGTGAC 57.252 34.615 0.00 0.00 0.00 3.67
5547 7133 7.867921 ACCACATTAGATTATTTAGGGTGACA 58.132 34.615 0.00 0.00 0.00 3.58
5548 7134 7.773690 ACCACATTAGATTATTTAGGGTGACAC 59.226 37.037 0.00 0.00 0.00 3.67
5549 7135 7.773224 CCACATTAGATTATTTAGGGTGACACA 59.227 37.037 8.08 0.00 0.00 3.72
5550 7136 9.173021 CACATTAGATTATTTAGGGTGACACAA 57.827 33.333 8.08 0.00 0.00 3.33
5551 7137 9.174166 ACATTAGATTATTTAGGGTGACACAAC 57.826 33.333 8.08 0.00 0.00 3.32
5552 7138 9.173021 CATTAGATTATTTAGGGTGACACAACA 57.827 33.333 8.08 0.00 0.00 3.33
5553 7139 9.920946 ATTAGATTATTTAGGGTGACACAACAT 57.079 29.630 8.08 0.00 0.00 2.71
5554 7140 9.747898 TTAGATTATTTAGGGTGACACAACATT 57.252 29.630 8.08 0.00 0.00 2.71
5555 7141 8.650143 AGATTATTTAGGGTGACACAACATTT 57.350 30.769 8.08 0.00 0.00 2.32
5556 7142 9.747898 AGATTATTTAGGGTGACACAACATTTA 57.252 29.630 8.08 0.00 0.00 1.40
5558 7144 9.747898 ATTATTTAGGGTGACACAACATTTAGA 57.252 29.630 8.08 0.00 0.00 2.10
5559 7145 9.747898 TTATTTAGGGTGACACAACATTTAGAT 57.252 29.630 8.08 0.00 0.00 1.98
5561 7147 9.747898 ATTTAGGGTGACACAACATTTAGATAA 57.252 29.630 8.08 0.00 0.00 1.75
5562 7148 8.786826 TTAGGGTGACACAACATTTAGATAAG 57.213 34.615 8.08 0.00 0.00 1.73
5563 7149 6.180472 AGGGTGACACAACATTTAGATAAGG 58.820 40.000 8.08 0.00 0.00 2.69
5564 7150 5.357032 GGGTGACACAACATTTAGATAAGGG 59.643 44.000 8.08 0.00 0.00 3.95
5565 7151 5.163652 GGTGACACAACATTTAGATAAGGGC 60.164 44.000 8.08 0.00 0.00 5.19
5566 7152 5.414454 GTGACACAACATTTAGATAAGGGCA 59.586 40.000 0.00 0.00 0.00 5.36
5567 7153 6.095440 GTGACACAACATTTAGATAAGGGCAT 59.905 38.462 0.00 0.00 0.00 4.40
5568 7154 6.095300 TGACACAACATTTAGATAAGGGCATG 59.905 38.462 0.00 0.00 0.00 4.06
5569 7155 5.951747 ACACAACATTTAGATAAGGGCATGT 59.048 36.000 0.00 0.00 0.00 3.21
5570 7156 7.116075 ACACAACATTTAGATAAGGGCATGTA 58.884 34.615 0.00 0.00 0.00 2.29
5571 7157 7.779798 ACACAACATTTAGATAAGGGCATGTAT 59.220 33.333 0.00 0.00 0.00 2.29
5572 7158 9.283768 CACAACATTTAGATAAGGGCATGTATA 57.716 33.333 0.00 0.00 0.00 1.47
5573 7159 9.284968 ACAACATTTAGATAAGGGCATGTATAC 57.715 33.333 0.00 0.00 0.00 1.47
5574 7160 9.507329 CAACATTTAGATAAGGGCATGTATACT 57.493 33.333 4.17 0.00 0.00 2.12
5576 7162 9.507329 ACATTTAGATAAGGGCATGTATACTTG 57.493 33.333 13.12 13.12 0.00 3.16
5577 7163 9.507329 CATTTAGATAAGGGCATGTATACTTGT 57.493 33.333 17.33 3.54 0.00 3.16
5579 7165 8.902540 TTAGATAAGGGCATGTATACTTGTTG 57.097 34.615 17.33 6.12 0.00 3.33
5580 7166 7.136822 AGATAAGGGCATGTATACTTGTTGA 57.863 36.000 17.33 3.24 0.00 3.18
5581 7167 7.220030 AGATAAGGGCATGTATACTTGTTGAG 58.780 38.462 17.33 0.00 0.00 3.02
5582 7168 5.435686 AAGGGCATGTATACTTGTTGAGA 57.564 39.130 17.33 0.00 0.00 3.27
5583 7169 5.435686 AGGGCATGTATACTTGTTGAGAA 57.564 39.130 17.33 0.00 0.00 2.87
5584 7170 5.431765 AGGGCATGTATACTTGTTGAGAAG 58.568 41.667 17.33 0.00 0.00 2.85
5585 7171 5.189736 AGGGCATGTATACTTGTTGAGAAGA 59.810 40.000 17.33 0.00 0.00 2.87
5586 7172 6.058183 GGGCATGTATACTTGTTGAGAAGAT 58.942 40.000 17.33 0.00 0.00 2.40
5587 7173 7.071196 AGGGCATGTATACTTGTTGAGAAGATA 59.929 37.037 17.33 0.00 0.00 1.98
5588 7174 7.386299 GGGCATGTATACTTGTTGAGAAGATAG 59.614 40.741 17.33 0.00 0.00 2.08
5589 7175 7.928706 GGCATGTATACTTGTTGAGAAGATAGT 59.071 37.037 17.33 0.00 0.00 2.12
5590 7176 8.973378 GCATGTATACTTGTTGAGAAGATAGTC 58.027 37.037 17.33 0.00 0.00 2.59
5602 7188 4.066646 GAAGATAGTCTTCTCTTGGGCC 57.933 50.000 11.43 0.00 46.98 5.80
5603 7189 3.413105 AGATAGTCTTCTCTTGGGCCT 57.587 47.619 4.53 0.00 0.00 5.19
5604 7190 3.304829 AGATAGTCTTCTCTTGGGCCTC 58.695 50.000 4.53 0.00 0.00 4.70
5605 7191 1.867363 TAGTCTTCTCTTGGGCCTCC 58.133 55.000 4.53 0.00 0.00 4.30
5606 7192 1.219393 GTCTTCTCTTGGGCCTCCG 59.781 63.158 4.53 0.00 35.24 4.63
5607 7193 1.229209 TCTTCTCTTGGGCCTCCGT 60.229 57.895 4.53 0.00 35.24 4.69
5608 7194 1.078848 CTTCTCTTGGGCCTCCGTG 60.079 63.158 4.53 0.00 35.24 4.94
5609 7195 1.831652 CTTCTCTTGGGCCTCCGTGT 61.832 60.000 4.53 0.00 35.24 4.49
5610 7196 1.415672 TTCTCTTGGGCCTCCGTGTT 61.416 55.000 4.53 0.00 35.24 3.32
5611 7197 0.543410 TCTCTTGGGCCTCCGTGTTA 60.543 55.000 4.53 0.00 35.24 2.41
5612 7198 0.541863 CTCTTGGGCCTCCGTGTTAT 59.458 55.000 4.53 0.00 35.24 1.89
5613 7199 0.988832 TCTTGGGCCTCCGTGTTATT 59.011 50.000 4.53 0.00 35.24 1.40
5614 7200 1.094785 CTTGGGCCTCCGTGTTATTG 58.905 55.000 4.53 0.00 35.24 1.90
5615 7201 0.693622 TTGGGCCTCCGTGTTATTGA 59.306 50.000 4.53 0.00 35.24 2.57
5616 7202 0.251916 TGGGCCTCCGTGTTATTGAG 59.748 55.000 4.53 0.00 35.24 3.02
5617 7203 0.539986 GGGCCTCCGTGTTATTGAGA 59.460 55.000 0.84 0.00 0.00 3.27
5618 7204 1.473434 GGGCCTCCGTGTTATTGAGAG 60.473 57.143 0.84 0.00 0.00 3.20
5619 7205 1.480954 GGCCTCCGTGTTATTGAGAGA 59.519 52.381 0.00 0.00 0.00 3.10
5620 7206 2.103263 GGCCTCCGTGTTATTGAGAGAT 59.897 50.000 0.00 0.00 0.00 2.75
5621 7207 3.126831 GCCTCCGTGTTATTGAGAGATG 58.873 50.000 0.00 0.00 0.00 2.90
5622 7208 3.181475 GCCTCCGTGTTATTGAGAGATGA 60.181 47.826 0.00 0.00 0.00 2.92
5623 7209 4.363999 CCTCCGTGTTATTGAGAGATGAC 58.636 47.826 0.00 0.00 0.00 3.06
5624 7210 4.098654 CCTCCGTGTTATTGAGAGATGACT 59.901 45.833 0.00 0.00 0.00 3.41
5625 7211 5.299531 CCTCCGTGTTATTGAGAGATGACTA 59.700 44.000 0.00 0.00 0.00 2.59
5626 7212 6.015856 CCTCCGTGTTATTGAGAGATGACTAT 60.016 42.308 0.00 0.00 0.00 2.12
5627 7213 7.175119 CCTCCGTGTTATTGAGAGATGACTATA 59.825 40.741 0.00 0.00 0.00 1.31
5628 7214 8.459911 TCCGTGTTATTGAGAGATGACTATAA 57.540 34.615 0.00 0.00 0.00 0.98
5629 7215 8.568794 TCCGTGTTATTGAGAGATGACTATAAG 58.431 37.037 0.00 0.00 0.00 1.73
5630 7216 8.568794 CCGTGTTATTGAGAGATGACTATAAGA 58.431 37.037 0.00 0.00 0.00 2.10
5631 7217 9.952188 CGTGTTATTGAGAGATGACTATAAGAA 57.048 33.333 0.00 0.00 0.00 2.52
5638 7224 8.410673 TGAGAGATGACTATAAGAACATACCC 57.589 38.462 0.00 0.00 0.00 3.69
5639 7225 7.451877 TGAGAGATGACTATAAGAACATACCCC 59.548 40.741 0.00 0.00 0.00 4.95
5640 7226 6.726764 AGAGATGACTATAAGAACATACCCCC 59.273 42.308 0.00 0.00 0.00 5.40
5641 7227 6.635021 AGATGACTATAAGAACATACCCCCT 58.365 40.000 0.00 0.00 0.00 4.79
5642 7228 6.726764 AGATGACTATAAGAACATACCCCCTC 59.273 42.308 0.00 0.00 0.00 4.30
5643 7229 5.152934 TGACTATAAGAACATACCCCCTCC 58.847 45.833 0.00 0.00 0.00 4.30
5644 7230 4.158015 ACTATAAGAACATACCCCCTCCG 58.842 47.826 0.00 0.00 0.00 4.63
5645 7231 2.555732 TAAGAACATACCCCCTCCGT 57.444 50.000 0.00 0.00 0.00 4.69
5646 7232 1.201424 AAGAACATACCCCCTCCGTC 58.799 55.000 0.00 0.00 0.00 4.79
5647 7233 0.690077 AGAACATACCCCCTCCGTCC 60.690 60.000 0.00 0.00 0.00 4.79
5648 7234 0.690077 GAACATACCCCCTCCGTCCT 60.690 60.000 0.00 0.00 0.00 3.85
5649 7235 0.638292 AACATACCCCCTCCGTCCTA 59.362 55.000 0.00 0.00 0.00 2.94
5650 7236 0.638292 ACATACCCCCTCCGTCCTAA 59.362 55.000 0.00 0.00 0.00 2.69
5651 7237 1.339097 CATACCCCCTCCGTCCTAAG 58.661 60.000 0.00 0.00 0.00 2.18
5652 7238 0.939698 ATACCCCCTCCGTCCTAAGT 59.060 55.000 0.00 0.00 0.00 2.24
5653 7239 0.259938 TACCCCCTCCGTCCTAAGTC 59.740 60.000 0.00 0.00 0.00 3.01
5654 7240 1.761271 CCCCCTCCGTCCTAAGTCC 60.761 68.421 0.00 0.00 0.00 3.85
5655 7241 2.125961 CCCCTCCGTCCTAAGTCCG 61.126 68.421 0.00 0.00 0.00 4.79
5656 7242 2.783288 CCCTCCGTCCTAAGTCCGC 61.783 68.421 0.00 0.00 0.00 5.54
5657 7243 2.408022 CTCCGTCCTAAGTCCGCG 59.592 66.667 0.00 0.00 0.00 6.46
5658 7244 2.046023 TCCGTCCTAAGTCCGCGA 60.046 61.111 8.23 0.00 0.00 5.87
5659 7245 2.101770 CCGTCCTAAGTCCGCGAC 59.898 66.667 8.23 3.80 0.00 5.19
5660 7246 2.693762 CCGTCCTAAGTCCGCGACA 61.694 63.158 8.23 0.00 34.60 4.35
5661 7247 1.513586 CGTCCTAAGTCCGCGACAC 60.514 63.158 8.23 3.36 34.60 3.67
5662 7248 1.881602 GTCCTAAGTCCGCGACACT 59.118 57.895 8.23 6.22 34.60 3.55
5663 7249 0.243095 GTCCTAAGTCCGCGACACTT 59.757 55.000 21.99 21.99 37.80 3.16
5664 7250 1.470098 GTCCTAAGTCCGCGACACTTA 59.530 52.381 21.90 21.90 35.63 2.24
5665 7251 2.098770 GTCCTAAGTCCGCGACACTTAT 59.901 50.000 22.90 8.63 36.09 1.73
5666 7252 2.756760 TCCTAAGTCCGCGACACTTATT 59.243 45.455 22.90 8.07 36.09 1.40
5667 7253 3.194116 TCCTAAGTCCGCGACACTTATTT 59.806 43.478 22.90 7.79 36.09 1.40
5668 7254 3.930848 CCTAAGTCCGCGACACTTATTTT 59.069 43.478 22.90 7.50 36.09 1.82
5669 7255 5.104374 CCTAAGTCCGCGACACTTATTTTA 58.896 41.667 22.90 9.42 36.09 1.52
5670 7256 5.231568 CCTAAGTCCGCGACACTTATTTTAG 59.768 44.000 22.90 15.83 36.09 1.85
5671 7257 3.518590 AGTCCGCGACACTTATTTTAGG 58.481 45.455 8.23 0.00 34.60 2.69
5672 7258 3.194116 AGTCCGCGACACTTATTTTAGGA 59.806 43.478 8.23 0.00 34.60 2.94
5673 7259 3.305361 GTCCGCGACACTTATTTTAGGAC 59.695 47.826 8.23 0.00 38.77 3.85
5674 7260 2.280708 CCGCGACACTTATTTTAGGACG 59.719 50.000 8.23 0.00 0.00 4.79
5675 7261 2.280708 CGCGACACTTATTTTAGGACGG 59.719 50.000 0.00 0.00 0.00 4.79
5676 7262 3.514645 GCGACACTTATTTTAGGACGGA 58.485 45.455 0.00 0.00 0.00 4.69
5677 7263 3.550678 GCGACACTTATTTTAGGACGGAG 59.449 47.826 0.00 0.00 0.00 4.63
5678 7264 4.110482 CGACACTTATTTTAGGACGGAGG 58.890 47.826 0.00 0.00 0.00 4.30
5679 7265 4.439968 GACACTTATTTTAGGACGGAGGG 58.560 47.826 0.00 0.00 0.00 4.30
5680 7266 4.098894 ACACTTATTTTAGGACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
5681 7267 4.161754 ACACTTATTTTAGGACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
5682 7268 4.161754 CACTTATTTTAGGACGGAGGGAGT 59.838 45.833 0.00 0.00 0.00 3.85
5683 7269 4.161754 ACTTATTTTAGGACGGAGGGAGTG 59.838 45.833 0.00 0.00 0.00 3.51
5684 7270 0.611714 TTTTAGGACGGAGGGAGTGC 59.388 55.000 0.00 0.00 0.00 4.40
5685 7271 0.252103 TTTAGGACGGAGGGAGTGCT 60.252 55.000 0.00 0.00 42.78 4.40
5686 7272 0.627451 TTAGGACGGAGGGAGTGCTA 59.373 55.000 0.00 0.00 40.68 3.49
5687 7273 0.851469 TAGGACGGAGGGAGTGCTAT 59.149 55.000 0.00 0.00 40.68 2.97
5688 7274 0.851469 AGGACGGAGGGAGTGCTATA 59.149 55.000 0.00 0.00 38.51 1.31
5689 7275 0.960286 GGACGGAGGGAGTGCTATAC 59.040 60.000 0.00 0.00 0.00 1.47
5690 7276 1.688772 GACGGAGGGAGTGCTATACA 58.311 55.000 0.00 0.00 0.00 2.29
5691 7277 2.029623 GACGGAGGGAGTGCTATACAA 58.970 52.381 0.00 0.00 0.00 2.41
5692 7278 1.755380 ACGGAGGGAGTGCTATACAAC 59.245 52.381 0.00 0.00 0.00 3.32
5693 7279 1.269102 CGGAGGGAGTGCTATACAACG 60.269 57.143 0.00 0.00 0.00 4.10
5694 7280 2.029623 GGAGGGAGTGCTATACAACGA 58.970 52.381 0.00 0.00 0.00 3.85
5695 7281 2.429610 GGAGGGAGTGCTATACAACGAA 59.570 50.000 0.00 0.00 0.00 3.85
5696 7282 3.069729 GGAGGGAGTGCTATACAACGAAT 59.930 47.826 0.00 0.00 0.00 3.34
5697 7283 4.443034 GGAGGGAGTGCTATACAACGAATT 60.443 45.833 0.00 0.00 0.00 2.17
5698 7284 5.221382 GGAGGGAGTGCTATACAACGAATTA 60.221 44.000 0.00 0.00 0.00 1.40
5699 7285 5.598769 AGGGAGTGCTATACAACGAATTAC 58.401 41.667 0.00 0.00 0.00 1.89
5700 7286 5.363005 AGGGAGTGCTATACAACGAATTACT 59.637 40.000 0.00 0.00 0.00 2.24
5701 7287 6.047231 GGGAGTGCTATACAACGAATTACTT 58.953 40.000 0.00 0.00 0.00 2.24
5702 7288 6.200475 GGGAGTGCTATACAACGAATTACTTC 59.800 42.308 0.00 0.00 0.00 3.01
5703 7289 6.979238 GGAGTGCTATACAACGAATTACTTCT 59.021 38.462 0.00 0.00 0.00 2.85
5704 7290 7.491696 GGAGTGCTATACAACGAATTACTTCTT 59.508 37.037 0.00 0.00 0.00 2.52
5705 7291 9.512435 GAGTGCTATACAACGAATTACTTCTTA 57.488 33.333 0.00 0.00 0.00 2.10
5706 7292 9.517609 AGTGCTATACAACGAATTACTTCTTAG 57.482 33.333 0.00 0.00 0.00 2.18
5707 7293 9.298774 GTGCTATACAACGAATTACTTCTTAGT 57.701 33.333 0.00 0.00 38.44 2.24
5708 7294 9.865321 TGCTATACAACGAATTACTTCTTAGTT 57.135 29.630 0.00 0.00 35.78 2.24
5714 7300 8.015658 ACAACGAATTACTTCTTAGTTGATTGC 58.984 33.333 14.55 0.00 35.52 3.56
5715 7301 7.667043 ACGAATTACTTCTTAGTTGATTGCA 57.333 32.000 0.00 0.00 35.78 4.08
5716 7302 8.094798 ACGAATTACTTCTTAGTTGATTGCAA 57.905 30.769 0.00 0.00 35.78 4.08
5717 7303 8.730680 ACGAATTACTTCTTAGTTGATTGCAAT 58.269 29.630 12.83 12.83 36.22 3.56
5718 7304 9.559958 CGAATTACTTCTTAGTTGATTGCAATT 57.440 29.630 14.33 0.00 36.22 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.430864 TGACCCATTGTACCATTATCACAAT 58.569 36.000 0.00 0.00 42.17 2.71
2 3 5.821097 TGACCCATTGTACCATTATCACAA 58.179 37.500 0.00 0.00 36.66 3.33
3 4 5.443230 TGACCCATTGTACCATTATCACA 57.557 39.130 0.00 0.00 0.00 3.58
4 5 6.959639 AATGACCCATTGTACCATTATCAC 57.040 37.500 0.00 0.00 32.39 3.06
5 6 8.278639 ACTAAATGACCCATTGTACCATTATCA 58.721 33.333 0.00 0.00 34.04 2.15
6 7 8.691661 ACTAAATGACCCATTGTACCATTATC 57.308 34.615 0.00 0.00 34.04 1.75
52 53 9.675464 AAGTTGGATGCAAATTCATTAAATCAT 57.325 25.926 6.83 0.00 0.00 2.45
63 64 7.094205 CCTGAGTAAGTAAGTTGGATGCAAATT 60.094 37.037 16.70 16.70 0.00 1.82
66 67 5.221843 ACCTGAGTAAGTAAGTTGGATGCAA 60.222 40.000 0.00 0.00 0.00 4.08
88 89 5.834204 TCCTTAAATGAGCTCTAGGTCTACC 59.166 44.000 16.19 0.00 42.60 3.18
89 90 6.015772 CCTCCTTAAATGAGCTCTAGGTCTAC 60.016 46.154 16.19 0.00 42.60 2.59
90 91 6.071984 CCTCCTTAAATGAGCTCTAGGTCTA 58.928 44.000 16.19 0.00 42.60 2.59
103 104 5.684704 TCCAGTAATGAGCCTCCTTAAATG 58.315 41.667 0.00 0.00 0.00 2.32
108 109 6.558775 TGTATATTCCAGTAATGAGCCTCCTT 59.441 38.462 0.00 0.00 0.00 3.36
137 138 7.562088 GTGGGGAACTTCATATTATAAAACCCA 59.438 37.037 0.00 0.00 39.42 4.51
138 139 7.783119 AGTGGGGAACTTCATATTATAAAACCC 59.217 37.037 0.00 0.00 34.57 4.11
139 140 8.762481 AGTGGGGAACTTCATATTATAAAACC 57.238 34.615 0.00 0.00 34.57 3.27
149 150 8.612486 TTTACATACTAGTGGGGAACTTCATA 57.388 34.615 5.39 0.00 40.56 2.15
191 192 8.367156 AGCACCACTTCATTGTATTTTATTGTT 58.633 29.630 0.00 0.00 0.00 2.83
197 200 7.524717 AAGTAGCACCACTTCATTGTATTTT 57.475 32.000 0.00 0.00 33.41 1.82
202 205 6.952773 TTTAAAGTAGCACCACTTCATTGT 57.047 33.333 0.00 0.00 37.78 2.71
248 253 8.160106 AGAGAGAAGGAACAACATCACTATTTT 58.840 33.333 0.00 0.00 0.00 1.82
249 254 7.684529 AGAGAGAAGGAACAACATCACTATTT 58.315 34.615 0.00 0.00 0.00 1.40
254 259 5.146010 AGAGAGAGAAGGAACAACATCAC 57.854 43.478 0.00 0.00 0.00 3.06
263 268 6.344500 GCATAAACATGAGAGAGAGAAGGAA 58.656 40.000 0.00 0.00 0.00 3.36
265 270 5.055812 GGCATAAACATGAGAGAGAGAAGG 58.944 45.833 0.00 0.00 0.00 3.46
276 281 8.970020 AGATGTATCAAAAAGGCATAAACATGA 58.030 29.630 0.00 0.00 0.00 3.07
277 282 9.590451 AAGATGTATCAAAAAGGCATAAACATG 57.410 29.630 0.00 0.00 0.00 3.21
278 283 9.590451 CAAGATGTATCAAAAAGGCATAAACAT 57.410 29.630 0.00 0.00 0.00 2.71
279 284 8.584157 ACAAGATGTATCAAAAAGGCATAAACA 58.416 29.630 0.00 0.00 0.00 2.83
280 285 8.986477 ACAAGATGTATCAAAAAGGCATAAAC 57.014 30.769 0.00 0.00 0.00 2.01
312 317 9.379770 AGAAGAGAAAAGGGATCCAAATAAAAA 57.620 29.630 15.23 0.00 0.00 1.94
314 319 8.394040 AGAGAAGAGAAAAGGGATCCAAATAAA 58.606 33.333 15.23 0.00 0.00 1.40
316 321 7.516450 AGAGAAGAGAAAAGGGATCCAAATA 57.484 36.000 15.23 0.00 0.00 1.40
317 322 6.400096 AGAGAAGAGAAAAGGGATCCAAAT 57.600 37.500 15.23 0.00 0.00 2.32
318 323 5.850046 AGAGAAGAGAAAAGGGATCCAAA 57.150 39.130 15.23 0.00 0.00 3.28
319 324 5.850046 AAGAGAAGAGAAAAGGGATCCAA 57.150 39.130 15.23 0.00 0.00 3.53
320 325 5.850046 AAAGAGAAGAGAAAAGGGATCCA 57.150 39.130 15.23 0.00 0.00 3.41
321 326 8.815565 AAATAAAGAGAAGAGAAAAGGGATCC 57.184 34.615 1.92 1.92 0.00 3.36
324 329 9.868160 AGAAAAATAAAGAGAAGAGAAAAGGGA 57.132 29.630 0.00 0.00 0.00 4.20
332 337 9.500785 ACCTTGAGAGAAAAATAAAGAGAAGAG 57.499 33.333 0.00 0.00 0.00 2.85
343 348 8.883731 CGTGACATTATACCTTGAGAGAAAAAT 58.116 33.333 0.00 0.00 0.00 1.82
345 350 7.383687 ACGTGACATTATACCTTGAGAGAAAA 58.616 34.615 0.00 0.00 0.00 2.29
347 352 6.525578 ACGTGACATTATACCTTGAGAGAA 57.474 37.500 0.00 0.00 0.00 2.87
365 370 2.254350 CTTCTGGCGACGACGTGA 59.746 61.111 4.58 0.00 41.98 4.35
368 373 1.337817 CTTCACTTCTGGCGACGACG 61.338 60.000 2.12 2.12 42.93 5.12
377 382 0.037882 TCTCGCTGCCTTCACTTCTG 60.038 55.000 0.00 0.00 0.00 3.02
385 390 0.106708 TGTTGTCTTCTCGCTGCCTT 59.893 50.000 0.00 0.00 0.00 4.35
394 399 2.494059 CCGTGACCAATGTTGTCTTCT 58.506 47.619 0.00 0.00 0.00 2.85
404 409 2.672996 GCTGCACCCGTGACCAAT 60.673 61.111 0.00 0.00 0.00 3.16
419 424 4.643387 GAGCAACCACCACCGGCT 62.643 66.667 0.00 0.00 37.56 5.52
460 465 2.436824 GAGGAGAAGCGGTTGGCC 60.437 66.667 3.70 5.73 45.17 5.36
462 467 0.390472 GACAGAGGAGAAGCGGTTGG 60.390 60.000 3.70 0.00 0.00 3.77
489 494 5.927115 GTCGTTGTTCTTCTTAATGAGGAGT 59.073 40.000 0.00 0.00 32.30 3.85
498 503 4.501559 CACTGTTCGTCGTTGTTCTTCTTA 59.498 41.667 0.00 0.00 0.00 2.10
499 504 3.306166 CACTGTTCGTCGTTGTTCTTCTT 59.694 43.478 0.00 0.00 0.00 2.52
502 512 2.601763 GTCACTGTTCGTCGTTGTTCTT 59.398 45.455 0.00 0.00 0.00 2.52
534 544 6.522054 GCCCTCAATCATCATTTCATTTCAT 58.478 36.000 0.00 0.00 0.00 2.57
547 557 1.077501 CACCACCGCCCTCAATCAT 60.078 57.895 0.00 0.00 0.00 2.45
548 558 2.350895 CACCACCGCCCTCAATCA 59.649 61.111 0.00 0.00 0.00 2.57
578 588 2.033492 CGAACGTACAACCCAACAACTC 60.033 50.000 0.00 0.00 0.00 3.01
582 592 1.489070 CGCGAACGTACAACCCAACA 61.489 55.000 0.00 0.00 33.53 3.33
589 599 0.386352 CAGACCTCGCGAACGTACAA 60.386 55.000 11.33 0.00 41.18 2.41
594 604 0.924363 CGTATCAGACCTCGCGAACG 60.924 60.000 11.33 10.97 42.01 3.95
595 605 0.591741 CCGTATCAGACCTCGCGAAC 60.592 60.000 11.33 4.81 0.00 3.95
602 612 0.395311 TTCGCTCCCGTATCAGACCT 60.395 55.000 0.00 0.00 35.54 3.85
607 617 0.821517 ACATGTTCGCTCCCGTATCA 59.178 50.000 0.00 0.00 35.54 2.15
614 624 5.631512 GTCATATTCTAGACATGTTCGCTCC 59.368 44.000 0.00 0.00 34.93 4.70
627 637 8.916062 AGATCCATCAGCTATGTCATATTCTAG 58.084 37.037 0.00 0.00 33.34 2.43
628 638 8.693625 CAGATCCATCAGCTATGTCATATTCTA 58.306 37.037 0.00 0.00 33.34 2.10
634 644 3.616802 CGCAGATCCATCAGCTATGTCAT 60.617 47.826 2.86 0.00 37.20 3.06
641 651 2.279985 CGCGCAGATCCATCAGCT 60.280 61.111 8.75 0.00 37.20 4.24
666 679 1.871676 CTCGTCCGTCCGATTGATCTA 59.128 52.381 0.00 0.00 36.08 1.98
676 689 1.792993 CGTATGTTGTCTCGTCCGTCC 60.793 57.143 0.00 0.00 0.00 4.79
694 707 8.009974 CGTCTGATTTTTAAAGATTCAAGACGT 58.990 33.333 25.03 0.00 35.60 4.34
756 769 8.565416 CACATGATGCTATTTTATGAGTGTCAT 58.435 33.333 0.00 0.00 40.72 3.06
778 791 1.135373 CGTTAGAGTGTCGGAGCACAT 60.135 52.381 11.43 4.58 41.52 3.21
792 805 4.401519 CCACAAGATACTCTTCCCGTTAGA 59.598 45.833 0.00 0.00 33.78 2.10
948 964 4.079615 AGTGTCAATGGGATGGATGATGAA 60.080 41.667 0.00 0.00 0.00 2.57
1083 1099 3.706373 GCGGCCTCACCTCTTGGA 61.706 66.667 0.00 0.00 37.04 3.53
1126 1142 4.216708 TCATGAGAGCTGAGACATCATCT 58.783 43.478 0.00 0.00 41.91 2.90
1150 1166 2.567985 CTGCTGCATGTGGATGTATGA 58.432 47.619 1.31 0.00 31.50 2.15
1208 1224 0.179045 GGGCATGCGACTGGATAGTT 60.179 55.000 12.44 0.00 37.25 2.24
1287 1303 2.355818 GGGAGGATTTGAAGTTACCGCT 60.356 50.000 0.00 0.00 0.00 5.52
1347 1363 2.745100 TGCTGCTGCTGCTACTGC 60.745 61.111 27.67 14.65 40.48 4.40
1348 1364 3.487417 CTGCTGCTGCTGCTACTG 58.513 61.111 27.67 13.98 40.48 2.74
1461 1485 5.106442 CGGAGCATACACAAGTTACATACA 58.894 41.667 0.00 0.00 0.00 2.29
1462 1486 4.506654 CCGGAGCATACACAAGTTACATAC 59.493 45.833 0.00 0.00 0.00 2.39
1463 1487 4.160814 ACCGGAGCATACACAAGTTACATA 59.839 41.667 9.46 0.00 0.00 2.29
1464 1488 3.055385 ACCGGAGCATACACAAGTTACAT 60.055 43.478 9.46 0.00 0.00 2.29
1465 1489 2.300723 ACCGGAGCATACACAAGTTACA 59.699 45.455 9.46 0.00 0.00 2.41
1466 1490 2.671396 CACCGGAGCATACACAAGTTAC 59.329 50.000 9.46 0.00 0.00 2.50
1477 1501 4.689612 AATTATACAGACACCGGAGCAT 57.310 40.909 9.46 0.00 0.00 3.79
1483 1511 4.127171 CTGGGGAAATTATACAGACACCG 58.873 47.826 0.00 0.00 0.00 4.94
1531 1559 1.450312 CACGTCCCTCTTGGCATCC 60.450 63.158 0.00 0.00 0.00 3.51
1633 1661 6.540083 CCCTTTTACCTCCTCTAAAGTTTCA 58.460 40.000 0.00 0.00 0.00 2.69
1636 1664 4.352893 TGCCCTTTTACCTCCTCTAAAGTT 59.647 41.667 0.00 0.00 0.00 2.66
1715 1743 6.226787 AGACCTGAAGACAGTCAAACTAATG 58.773 40.000 2.66 0.00 42.05 1.90
1809 1837 7.311408 TGATCAGACAGCGAATAATCAGATAG 58.689 38.462 0.00 0.00 0.00 2.08
1864 1892 2.688507 AGCTGACATAAGTGGTCGTTG 58.311 47.619 0.00 0.00 38.10 4.10
1889 1917 4.309933 TCTACCGATGCATAGCAATTGAG 58.690 43.478 10.34 0.00 43.62 3.02
1928 1956 6.688813 GCACAGCACTTTTAAATAGCAGATAC 59.311 38.462 8.95 0.00 0.00 2.24
1959 1987 5.942236 ACAGATGCAATGTTATCAGACAAGT 59.058 36.000 2.25 0.00 32.47 3.16
1960 1988 6.432607 ACAGATGCAATGTTATCAGACAAG 57.567 37.500 2.25 0.00 32.47 3.16
2039 2083 3.667960 CGACCTCATTTGCCTTTTCTTCG 60.668 47.826 0.00 0.00 0.00 3.79
2075 2119 5.766174 TGTAACATTGACCTTCTTAACCCAC 59.234 40.000 0.00 0.00 0.00 4.61
2081 2125 7.094805 GCAGACATTGTAACATTGACCTTCTTA 60.095 37.037 0.00 0.00 0.00 2.10
2202 2246 1.545841 TCGATGTGTGCAGGAGTACT 58.454 50.000 0.00 0.00 0.00 2.73
2294 2339 4.035675 GCTAAGGTGTATGCAAGATTCACC 59.964 45.833 15.99 15.99 45.94 4.02
2392 2437 1.913762 ACCACTAGCAGCCGGTTCT 60.914 57.895 1.90 0.00 0.00 3.01
2583 2629 2.040412 GACTCCTGAAACCATTGGACCT 59.960 50.000 10.37 0.00 0.00 3.85
2963 3023 0.606604 GAGCTACCTGGTGTTTCGGA 59.393 55.000 10.23 0.00 0.00 4.55
3041 3101 6.697641 TTAGAGAACATCCTAACACCCTTT 57.302 37.500 0.00 0.00 0.00 3.11
3051 3111 4.081198 CACCTTCAGCTTAGAGAACATCCT 60.081 45.833 0.00 0.00 0.00 3.24
3068 3128 4.036262 TGTTGTGCAAGATTACACACCTTC 59.964 41.667 0.00 0.00 45.94 3.46
3092 3152 4.023792 TCAAATTAGGCTATTCATGCAGCG 60.024 41.667 0.00 0.00 38.73 5.18
3094 3154 6.381481 TGTCAAATTAGGCTATTCATGCAG 57.619 37.500 0.00 0.00 0.00 4.41
3106 3166 9.793252 CAATGGAAGAATACTTGTCAAATTAGG 57.207 33.333 0.00 0.00 36.39 2.69
3116 3176 7.605691 AGAGACAAGTCAATGGAAGAATACTTG 59.394 37.037 10.55 10.55 45.76 3.16
3316 3376 6.602179 TGAAAGAGTAATTGCATTGTCGAAG 58.398 36.000 0.00 0.00 0.00 3.79
3683 3781 3.608316 ACACATGCAAAACAAGGTTGT 57.392 38.095 0.00 0.00 44.72 3.32
3867 3975 0.994995 CACTTTGAGCAGATCGGTCG 59.005 55.000 10.58 0.00 45.52 4.79
3940 4050 4.773323 ATTAAGCTTTTGGACTCTGTGC 57.227 40.909 3.20 0.00 0.00 4.57
3975 4085 3.498397 ACGGTGCATGACTTAGTTTTCTG 59.502 43.478 0.00 0.00 0.00 3.02
3976 4086 3.740115 ACGGTGCATGACTTAGTTTTCT 58.260 40.909 0.00 0.00 0.00 2.52
3978 4088 3.472652 TGACGGTGCATGACTTAGTTTT 58.527 40.909 0.00 0.00 0.00 2.43
3995 4105 7.800767 TCTGAGATGAAAAGAGAAAAATGACG 58.199 34.615 0.00 0.00 0.00 4.35
4038 4148 7.017645 CACACATTTAGATGTTCGAGAAAAGG 58.982 38.462 0.00 0.00 43.92 3.11
4072 4182 5.034200 TCCCAGTGCCCTTTTCTAATAGTA 58.966 41.667 0.00 0.00 0.00 1.82
4074 4184 4.503714 TCCCAGTGCCCTTTTCTAATAG 57.496 45.455 0.00 0.00 0.00 1.73
4115 4225 2.707257 AGTTCCGGTCTTTTCCTGGTTA 59.293 45.455 0.00 0.00 0.00 2.85
4122 4232 7.255491 TCTTTCTTTTAGTTCCGGTCTTTTC 57.745 36.000 0.00 0.00 0.00 2.29
4127 4237 6.856135 TCTTTCTTTCTTTTAGTTCCGGTC 57.144 37.500 0.00 0.00 0.00 4.79
4145 4255 8.487970 GGCTGCTAATTTTTGTTTAGTTCTTTC 58.512 33.333 0.00 0.00 0.00 2.62
4146 4256 8.204160 AGGCTGCTAATTTTTGTTTAGTTCTTT 58.796 29.630 0.00 0.00 0.00 2.52
4147 4257 7.726216 AGGCTGCTAATTTTTGTTTAGTTCTT 58.274 30.769 0.00 0.00 0.00 2.52
4166 4276 1.066454 ACGTTTGGTTTTGTAGGCTGC 59.934 47.619 0.00 0.00 0.00 5.25
4167 4277 3.810941 TCTACGTTTGGTTTTGTAGGCTG 59.189 43.478 0.00 0.00 35.98 4.85
4169 4279 4.035441 TGTTCTACGTTTGGTTTTGTAGGC 59.965 41.667 0.00 0.00 35.98 3.93
4229 4407 5.840693 TCCTCCAGATATACAATCTTGAGCA 59.159 40.000 9.49 0.00 36.90 4.26
4293 4472 7.501559 CCATGAAATAGAGAACAATGAGGACAT 59.498 37.037 0.00 0.00 38.50 3.06
4298 4477 6.939132 AGCCATGAAATAGAGAACAATGAG 57.061 37.500 0.00 0.00 0.00 2.90
4303 4482 9.905713 AACTAATAAGCCATGAAATAGAGAACA 57.094 29.630 0.00 0.00 0.00 3.18
4349 4528 1.879380 CAGTCCATTCGTCCTGCAAAA 59.121 47.619 0.00 0.00 0.00 2.44
4368 4547 4.160439 CCATACTGTACTTTCTGCTCTCCA 59.840 45.833 0.00 0.00 0.00 3.86
4550 4729 4.040936 AGCGTCATCTAGATGTATCCCT 57.959 45.455 27.80 16.51 39.72 4.20
4592 4771 4.990426 GCATTTTAGGTCTTGCATGTGTTT 59.010 37.500 0.00 0.00 35.22 2.83
4825 5006 9.893305 ACAATGCTTTTTCTACACTGTTATAAC 57.107 29.630 8.75 8.75 0.00 1.89
4958 5144 8.509690 CGCATATTCTGAATCCAACTGAAATAT 58.490 33.333 6.10 0.00 0.00 1.28
4959 5145 7.714813 TCGCATATTCTGAATCCAACTGAAATA 59.285 33.333 6.10 0.00 0.00 1.40
4960 5146 6.543465 TCGCATATTCTGAATCCAACTGAAAT 59.457 34.615 6.10 0.00 0.00 2.17
4961 5147 5.879777 TCGCATATTCTGAATCCAACTGAAA 59.120 36.000 6.10 0.00 0.00 2.69
4995 5182 7.173218 TGAAAAAGTGAGATAGGTGTTCATGTC 59.827 37.037 0.00 0.00 0.00 3.06
5019 5206 2.703536 TCTTTGGGTAGTTCTGCACTGA 59.296 45.455 0.00 0.00 35.97 3.41
5020 5207 3.126001 TCTTTGGGTAGTTCTGCACTG 57.874 47.619 0.00 0.00 35.97 3.66
5021 5208 3.391296 TCTTCTTTGGGTAGTTCTGCACT 59.609 43.478 0.00 0.00 39.87 4.40
5022 5209 3.498777 GTCTTCTTTGGGTAGTTCTGCAC 59.501 47.826 0.00 0.00 0.00 4.57
5023 5210 3.135712 TGTCTTCTTTGGGTAGTTCTGCA 59.864 43.478 0.00 0.00 0.00 4.41
5024 5211 3.740115 TGTCTTCTTTGGGTAGTTCTGC 58.260 45.455 0.00 0.00 0.00 4.26
5025 5212 4.757149 CCTTGTCTTCTTTGGGTAGTTCTG 59.243 45.833 0.00 0.00 0.00 3.02
5034 5221 3.888930 TGCTAAACCCTTGTCTTCTTTGG 59.111 43.478 0.00 0.00 0.00 3.28
5042 5229 6.095440 ACATAATGACATGCTAAACCCTTGTC 59.905 38.462 0.00 0.00 37.68 3.18
5109 6655 5.734720 CTTTCAAGCTCAGATGGTAGGTTA 58.265 41.667 0.00 0.00 32.46 2.85
5110 6656 4.583871 CTTTCAAGCTCAGATGGTAGGTT 58.416 43.478 0.00 0.00 33.90 3.50
5111 6657 4.213564 CTTTCAAGCTCAGATGGTAGGT 57.786 45.455 0.00 0.00 0.00 3.08
5127 6673 7.725251 AGGATTTACAACTTTGAATGCTTTCA 58.275 30.769 10.76 10.76 40.09 2.69
5128 6674 7.867403 TGAGGATTTACAACTTTGAATGCTTTC 59.133 33.333 5.41 5.41 0.00 2.62
5157 6707 6.518493 CCGCCATATAACCTTACTGTAAAGA 58.482 40.000 3.30 0.00 0.00 2.52
5158 6708 5.178809 GCCGCCATATAACCTTACTGTAAAG 59.821 44.000 1.46 0.00 0.00 1.85
5171 6721 2.220313 GTTTAACCGGCCGCCATATAA 58.780 47.619 22.85 10.67 0.00 0.98
5172 6722 1.140452 TGTTTAACCGGCCGCCATATA 59.860 47.619 22.85 4.49 0.00 0.86
5173 6723 0.107116 TGTTTAACCGGCCGCCATAT 60.107 50.000 22.85 5.58 0.00 1.78
5174 6724 1.025647 GTGTTTAACCGGCCGCCATA 61.026 55.000 22.85 9.28 0.00 2.74
5175 6725 2.034376 TGTTTAACCGGCCGCCAT 59.966 55.556 22.85 10.43 0.00 4.40
5176 6726 2.979120 GTGTTTAACCGGCCGCCA 60.979 61.111 22.85 3.00 0.00 5.69
5177 6727 2.670592 AGTGTTTAACCGGCCGCC 60.671 61.111 22.85 0.00 0.00 6.13
5178 6728 1.232621 AAGAGTGTTTAACCGGCCGC 61.233 55.000 22.85 5.24 0.00 6.53
5179 6729 2.083167 TAAGAGTGTTTAACCGGCCG 57.917 50.000 21.04 21.04 0.00 6.13
5180 6730 5.181009 ACTATTAAGAGTGTTTAACCGGCC 58.819 41.667 0.00 0.00 0.00 6.13
5181 6731 6.369615 TGAACTATTAAGAGTGTTTAACCGGC 59.630 38.462 2.98 0.00 0.00 6.13
5182 6732 7.894376 TGAACTATTAAGAGTGTTTAACCGG 57.106 36.000 2.98 0.00 0.00 5.28
5183 6733 8.767085 TGTTGAACTATTAAGAGTGTTTAACCG 58.233 33.333 2.98 0.00 37.78 4.44
5188 6738 8.974060 TCCTTGTTGAACTATTAAGAGTGTTT 57.026 30.769 2.98 0.00 0.00 2.83
5189 6739 8.429641 TCTCCTTGTTGAACTATTAAGAGTGTT 58.570 33.333 2.98 0.00 0.00 3.32
5190 6740 7.963532 TCTCCTTGTTGAACTATTAAGAGTGT 58.036 34.615 2.98 0.00 0.00 3.55
5191 6741 8.833231 TTCTCCTTGTTGAACTATTAAGAGTG 57.167 34.615 2.98 0.00 0.00 3.51
5192 6742 8.871125 TCTTCTCCTTGTTGAACTATTAAGAGT 58.129 33.333 0.00 0.00 0.00 3.24
5193 6743 9.712305 TTCTTCTCCTTGTTGAACTATTAAGAG 57.288 33.333 0.00 0.00 0.00 2.85
5196 6746 9.284968 CCTTTCTTCTCCTTGTTGAACTATTAA 57.715 33.333 0.00 0.00 0.00 1.40
5197 6747 8.656806 TCCTTTCTTCTCCTTGTTGAACTATTA 58.343 33.333 0.00 0.00 0.00 0.98
5198 6748 7.518188 TCCTTTCTTCTCCTTGTTGAACTATT 58.482 34.615 0.00 0.00 0.00 1.73
5199 6749 7.079451 TCCTTTCTTCTCCTTGTTGAACTAT 57.921 36.000 0.00 0.00 0.00 2.12
5200 6750 6.494666 TCCTTTCTTCTCCTTGTTGAACTA 57.505 37.500 0.00 0.00 0.00 2.24
5201 6751 5.373812 TCCTTTCTTCTCCTTGTTGAACT 57.626 39.130 0.00 0.00 0.00 3.01
5202 6752 6.451064 TTTCCTTTCTTCTCCTTGTTGAAC 57.549 37.500 0.00 0.00 0.00 3.18
5208 6758 4.373156 TCCCTTTCCTTTCTTCTCCTTG 57.627 45.455 0.00 0.00 0.00 3.61
5230 6780 7.677454 TGTCGTCTCTGTTTCTATTACTGTA 57.323 36.000 0.00 0.00 0.00 2.74
5241 6791 3.869246 ACGTCAATTTGTCGTCTCTGTTT 59.131 39.130 14.42 0.00 37.57 2.83
5242 6792 3.245284 CACGTCAATTTGTCGTCTCTGTT 59.755 43.478 16.73 0.00 39.85 3.16
5246 6796 3.244345 TGAACACGTCAATTTGTCGTCTC 59.756 43.478 16.73 15.71 39.85 3.36
5250 6800 2.031068 TGGTGAACACGTCAATTTGTCG 59.969 45.455 13.22 13.22 38.23 4.35
5263 6813 4.572571 GGCCGTGGGTGGTGAACA 62.573 66.667 0.00 0.00 0.00 3.18
5265 6815 2.527123 TAGGCCGTGGGTGGTGAA 60.527 61.111 0.00 0.00 0.00 3.18
5266 6816 3.315949 GTAGGCCGTGGGTGGTGA 61.316 66.667 0.00 0.00 0.00 4.02
5269 6855 2.124736 CATGTAGGCCGTGGGTGG 60.125 66.667 0.00 0.00 0.00 4.61
5286 6872 1.766069 GTCGTTTGGGCATTTGTGAC 58.234 50.000 0.00 0.00 0.00 3.67
5321 6907 5.302357 AGAAATTCATCCGCAACTCTTTC 57.698 39.130 0.00 0.00 0.00 2.62
5324 6910 5.245531 TGTAAGAAATTCATCCGCAACTCT 58.754 37.500 0.00 0.00 0.00 3.24
5375 6961 4.736126 AGTTTCTTGTTTTCAACTGGGG 57.264 40.909 0.00 0.00 35.77 4.96
5376 6962 8.716646 AATTAAGTTTCTTGTTTTCAACTGGG 57.283 30.769 0.00 0.00 35.77 4.45
5403 6989 3.202906 CGGTCAAGTGAAGAAGGAACAA 58.797 45.455 0.00 0.00 0.00 2.83
5405 6991 2.143925 CCGGTCAAGTGAAGAAGGAAC 58.856 52.381 0.00 0.00 0.00 3.62
5417 7003 1.507141 GAATATGGCGGCCGGTCAAG 61.507 60.000 29.38 0.00 31.29 3.02
5430 7016 4.164221 ACTGGGGGAGTACTGTTGAATATG 59.836 45.833 0.00 0.00 30.86 1.78
5431 7017 4.371681 ACTGGGGGAGTACTGTTGAATAT 58.628 43.478 0.00 0.00 30.86 1.28
5432 7018 3.798515 ACTGGGGGAGTACTGTTGAATA 58.201 45.455 0.00 0.00 30.86 1.75
5433 7019 2.632537 ACTGGGGGAGTACTGTTGAAT 58.367 47.619 0.00 0.00 30.86 2.57
5434 7020 2.112279 ACTGGGGGAGTACTGTTGAA 57.888 50.000 0.00 0.00 30.86 2.69
5435 7021 3.263369 TTACTGGGGGAGTACTGTTGA 57.737 47.619 0.00 0.00 36.86 3.18
5436 7022 3.581332 TCTTTACTGGGGGAGTACTGTTG 59.419 47.826 0.00 0.00 36.86 3.33
5437 7023 3.838903 CTCTTTACTGGGGGAGTACTGTT 59.161 47.826 0.00 0.00 36.86 3.16
5438 7024 3.077088 TCTCTTTACTGGGGGAGTACTGT 59.923 47.826 0.00 0.00 36.86 3.55
5439 7025 3.709587 TCTCTTTACTGGGGGAGTACTG 58.290 50.000 0.00 0.00 36.86 2.74
5440 7026 4.628661 ATCTCTTTACTGGGGGAGTACT 57.371 45.455 0.00 0.00 36.86 2.73
5441 7027 7.178805 CCTTATATCTCTTTACTGGGGGAGTAC 59.821 44.444 0.00 0.00 36.86 2.73
5442 7028 7.246763 CCTTATATCTCTTTACTGGGGGAGTA 58.753 42.308 0.00 0.00 35.96 2.59
5443 7029 6.085416 CCTTATATCTCTTTACTGGGGGAGT 58.915 44.000 0.00 0.00 38.88 3.85
5444 7030 5.485708 CCCTTATATCTCTTTACTGGGGGAG 59.514 48.000 0.00 0.00 0.00 4.30
5445 7031 5.102346 ACCCTTATATCTCTTTACTGGGGGA 60.102 44.000 0.00 0.00 36.59 4.81
5446 7032 5.013183 CACCCTTATATCTCTTTACTGGGGG 59.987 48.000 0.00 0.00 36.59 5.40
5447 7033 5.607171 ACACCCTTATATCTCTTTACTGGGG 59.393 44.000 0.00 0.00 36.59 4.96
5448 7034 6.749036 ACACCCTTATATCTCTTTACTGGG 57.251 41.667 0.00 0.00 38.13 4.45
5454 7040 9.239551 GTGGTTTAAACACCCTTATATCTCTTT 57.760 33.333 19.57 0.00 35.73 2.52
5455 7041 8.612145 AGTGGTTTAAACACCCTTATATCTCTT 58.388 33.333 19.57 0.00 39.63 2.85
5456 7042 8.159229 AGTGGTTTAAACACCCTTATATCTCT 57.841 34.615 19.57 2.49 39.63 3.10
5457 7043 9.895138 TTAGTGGTTTAAACACCCTTATATCTC 57.105 33.333 19.57 0.00 39.63 2.75
5462 7048 9.511272 CTACTTTAGTGGTTTAAACACCCTTAT 57.489 33.333 19.57 0.00 39.63 1.73
5463 7049 8.493607 ACTACTTTAGTGGTTTAAACACCCTTA 58.506 33.333 19.57 3.74 36.27 2.69
5464 7050 7.348815 ACTACTTTAGTGGTTTAAACACCCTT 58.651 34.615 19.57 0.00 36.27 3.95
5465 7051 6.903516 ACTACTTTAGTGGTTTAAACACCCT 58.096 36.000 19.57 13.13 36.27 4.34
5466 7052 8.853077 ATACTACTTTAGTGGTTTAAACACCC 57.147 34.615 19.57 3.63 40.33 4.61
5500 7086 9.716531 GTGGTTACTAATAACTACTTCCTTTGT 57.283 33.333 3.63 0.00 44.94 2.83
5518 7104 9.847224 CACCCTAAATAATCTAATGTGGTTACT 57.153 33.333 0.00 0.00 0.00 2.24
5519 7105 9.841295 TCACCCTAAATAATCTAATGTGGTTAC 57.159 33.333 0.00 0.00 0.00 2.50
5520 7106 9.841295 GTCACCCTAAATAATCTAATGTGGTTA 57.159 33.333 0.00 0.00 0.00 2.85
5521 7107 8.333235 TGTCACCCTAAATAATCTAATGTGGTT 58.667 33.333 0.00 0.00 0.00 3.67
5522 7108 7.773690 GTGTCACCCTAAATAATCTAATGTGGT 59.226 37.037 0.00 0.00 0.00 4.16
5523 7109 7.773224 TGTGTCACCCTAAATAATCTAATGTGG 59.227 37.037 0.00 0.00 0.00 4.17
5524 7110 8.731275 TGTGTCACCCTAAATAATCTAATGTG 57.269 34.615 0.00 0.00 0.00 3.21
5525 7111 9.174166 GTTGTGTCACCCTAAATAATCTAATGT 57.826 33.333 0.00 0.00 0.00 2.71
5526 7112 9.173021 TGTTGTGTCACCCTAAATAATCTAATG 57.827 33.333 0.00 0.00 0.00 1.90
5527 7113 9.920946 ATGTTGTGTCACCCTAAATAATCTAAT 57.079 29.630 0.00 0.00 0.00 1.73
5528 7114 9.747898 AATGTTGTGTCACCCTAAATAATCTAA 57.252 29.630 0.00 0.00 0.00 2.10
5529 7115 9.747898 AAATGTTGTGTCACCCTAAATAATCTA 57.252 29.630 0.00 0.00 0.00 1.98
5530 7116 8.650143 AAATGTTGTGTCACCCTAAATAATCT 57.350 30.769 0.00 0.00 0.00 2.40
5532 7118 9.747898 TCTAAATGTTGTGTCACCCTAAATAAT 57.252 29.630 0.00 0.00 0.00 1.28
5533 7119 9.747898 ATCTAAATGTTGTGTCACCCTAAATAA 57.252 29.630 0.00 0.00 0.00 1.40
5535 7121 9.747898 TTATCTAAATGTTGTGTCACCCTAAAT 57.252 29.630 0.00 0.00 0.00 1.40
5536 7122 9.226606 CTTATCTAAATGTTGTGTCACCCTAAA 57.773 33.333 0.00 0.00 0.00 1.85
5537 7123 7.827236 CCTTATCTAAATGTTGTGTCACCCTAA 59.173 37.037 0.00 0.00 0.00 2.69
5538 7124 7.335627 CCTTATCTAAATGTTGTGTCACCCTA 58.664 38.462 0.00 0.00 0.00 3.53
5539 7125 6.180472 CCTTATCTAAATGTTGTGTCACCCT 58.820 40.000 0.00 0.00 0.00 4.34
5540 7126 5.357032 CCCTTATCTAAATGTTGTGTCACCC 59.643 44.000 0.00 0.00 0.00 4.61
5541 7127 5.163652 GCCCTTATCTAAATGTTGTGTCACC 60.164 44.000 0.00 0.00 0.00 4.02
5542 7128 5.414454 TGCCCTTATCTAAATGTTGTGTCAC 59.586 40.000 0.00 0.00 0.00 3.67
5543 7129 5.565509 TGCCCTTATCTAAATGTTGTGTCA 58.434 37.500 0.00 0.00 0.00 3.58
5544 7130 6.095440 ACATGCCCTTATCTAAATGTTGTGTC 59.905 38.462 0.00 0.00 0.00 3.67
5545 7131 5.951747 ACATGCCCTTATCTAAATGTTGTGT 59.048 36.000 0.00 0.00 0.00 3.72
5546 7132 6.455360 ACATGCCCTTATCTAAATGTTGTG 57.545 37.500 0.00 0.00 0.00 3.33
5547 7133 9.284968 GTATACATGCCCTTATCTAAATGTTGT 57.715 33.333 0.00 0.00 31.19 3.32
5548 7134 9.507329 AGTATACATGCCCTTATCTAAATGTTG 57.493 33.333 5.50 0.00 31.19 3.33
5550 7136 9.507329 CAAGTATACATGCCCTTATCTAAATGT 57.493 33.333 5.50 0.00 33.18 2.71
5551 7137 9.507329 ACAAGTATACATGCCCTTATCTAAATG 57.493 33.333 7.99 0.00 0.00 2.32
5553 7139 9.337396 CAACAAGTATACATGCCCTTATCTAAA 57.663 33.333 7.99 0.00 0.00 1.85
5554 7140 8.710239 TCAACAAGTATACATGCCCTTATCTAA 58.290 33.333 7.99 0.00 0.00 2.10
5555 7141 8.257602 TCAACAAGTATACATGCCCTTATCTA 57.742 34.615 7.99 0.00 0.00 1.98
5556 7142 7.071196 TCTCAACAAGTATACATGCCCTTATCT 59.929 37.037 7.99 0.00 0.00 1.98
5557 7143 7.217200 TCTCAACAAGTATACATGCCCTTATC 58.783 38.462 7.99 0.00 0.00 1.75
5558 7144 7.136822 TCTCAACAAGTATACATGCCCTTAT 57.863 36.000 7.99 0.00 0.00 1.73
5559 7145 6.553953 TCTCAACAAGTATACATGCCCTTA 57.446 37.500 7.99 0.00 0.00 2.69
5560 7146 5.435686 TCTCAACAAGTATACATGCCCTT 57.564 39.130 7.99 0.00 0.00 3.95
5561 7147 5.189736 TCTTCTCAACAAGTATACATGCCCT 59.810 40.000 7.99 0.00 0.00 5.19
5562 7148 5.428253 TCTTCTCAACAAGTATACATGCCC 58.572 41.667 7.99 0.00 0.00 5.36
5563 7149 7.928706 ACTATCTTCTCAACAAGTATACATGCC 59.071 37.037 7.99 0.00 0.00 4.40
5564 7150 8.879342 ACTATCTTCTCAACAAGTATACATGC 57.121 34.615 7.99 0.00 0.00 4.06
5582 7168 3.709141 GAGGCCCAAGAGAAGACTATCTT 59.291 47.826 0.00 0.00 39.87 2.40
5583 7169 3.304829 GAGGCCCAAGAGAAGACTATCT 58.695 50.000 0.00 0.00 0.00 1.98
5584 7170 2.367241 GGAGGCCCAAGAGAAGACTATC 59.633 54.545 0.00 0.00 0.00 2.08
5585 7171 2.403561 GGAGGCCCAAGAGAAGACTAT 58.596 52.381 0.00 0.00 0.00 2.12
5586 7172 1.867363 GGAGGCCCAAGAGAAGACTA 58.133 55.000 0.00 0.00 0.00 2.59
5587 7173 1.261238 CGGAGGCCCAAGAGAAGACT 61.261 60.000 0.00 0.00 0.00 3.24
5588 7174 1.219393 CGGAGGCCCAAGAGAAGAC 59.781 63.158 0.00 0.00 0.00 3.01
5589 7175 1.229209 ACGGAGGCCCAAGAGAAGA 60.229 57.895 0.00 0.00 0.00 2.87
5590 7176 1.078848 CACGGAGGCCCAAGAGAAG 60.079 63.158 0.00 0.00 0.00 2.85
5591 7177 1.415672 AACACGGAGGCCCAAGAGAA 61.416 55.000 0.00 0.00 0.00 2.87
5592 7178 0.543410 TAACACGGAGGCCCAAGAGA 60.543 55.000 0.00 0.00 0.00 3.10
5593 7179 0.541863 ATAACACGGAGGCCCAAGAG 59.458 55.000 0.00 0.00 0.00 2.85
5594 7180 0.988832 AATAACACGGAGGCCCAAGA 59.011 50.000 0.00 0.00 0.00 3.02
5595 7181 1.094785 CAATAACACGGAGGCCCAAG 58.905 55.000 0.00 0.00 0.00 3.61
5596 7182 0.693622 TCAATAACACGGAGGCCCAA 59.306 50.000 0.00 0.00 0.00 4.12
5597 7183 0.251916 CTCAATAACACGGAGGCCCA 59.748 55.000 0.00 0.00 0.00 5.36
5598 7184 0.539986 TCTCAATAACACGGAGGCCC 59.460 55.000 0.00 0.00 0.00 5.80
5599 7185 1.480954 TCTCTCAATAACACGGAGGCC 59.519 52.381 0.00 0.00 0.00 5.19
5600 7186 2.961526 TCTCTCAATAACACGGAGGC 57.038 50.000 0.00 0.00 0.00 4.70
5601 7187 4.098654 AGTCATCTCTCAATAACACGGAGG 59.901 45.833 0.00 0.00 0.00 4.30
5602 7188 5.255710 AGTCATCTCTCAATAACACGGAG 57.744 43.478 0.00 0.00 0.00 4.63
5603 7189 6.961360 ATAGTCATCTCTCAATAACACGGA 57.039 37.500 0.00 0.00 0.00 4.69
5604 7190 8.568794 TCTTATAGTCATCTCTCAATAACACGG 58.431 37.037 0.00 0.00 0.00 4.94
5605 7191 9.952188 TTCTTATAGTCATCTCTCAATAACACG 57.048 33.333 0.00 0.00 0.00 4.49
5612 7198 8.861086 GGGTATGTTCTTATAGTCATCTCTCAA 58.139 37.037 0.00 0.00 0.00 3.02
5613 7199 7.451877 GGGGTATGTTCTTATAGTCATCTCTCA 59.548 40.741 0.00 0.00 0.00 3.27
5614 7200 7.093684 GGGGGTATGTTCTTATAGTCATCTCTC 60.094 44.444 0.00 0.00 0.00 3.20
5615 7201 6.726764 GGGGGTATGTTCTTATAGTCATCTCT 59.273 42.308 0.00 0.00 0.00 3.10
5616 7202 6.726764 AGGGGGTATGTTCTTATAGTCATCTC 59.273 42.308 0.00 0.00 0.00 2.75
5617 7203 6.635021 AGGGGGTATGTTCTTATAGTCATCT 58.365 40.000 0.00 0.00 0.00 2.90
5618 7204 6.070710 GGAGGGGGTATGTTCTTATAGTCATC 60.071 46.154 0.00 0.00 0.00 2.92
5619 7205 5.785940 GGAGGGGGTATGTTCTTATAGTCAT 59.214 44.000 0.00 0.00 0.00 3.06
5620 7206 5.152934 GGAGGGGGTATGTTCTTATAGTCA 58.847 45.833 0.00 0.00 0.00 3.41
5621 7207 4.220163 CGGAGGGGGTATGTTCTTATAGTC 59.780 50.000 0.00 0.00 0.00 2.59
5622 7208 4.158015 CGGAGGGGGTATGTTCTTATAGT 58.842 47.826 0.00 0.00 0.00 2.12
5623 7209 4.158015 ACGGAGGGGGTATGTTCTTATAG 58.842 47.826 0.00 0.00 0.00 1.31
5624 7210 4.154942 GACGGAGGGGGTATGTTCTTATA 58.845 47.826 0.00 0.00 0.00 0.98
5625 7211 2.970640 GACGGAGGGGGTATGTTCTTAT 59.029 50.000 0.00 0.00 0.00 1.73
5626 7212 2.391678 GACGGAGGGGGTATGTTCTTA 58.608 52.381 0.00 0.00 0.00 2.10
5627 7213 1.201424 GACGGAGGGGGTATGTTCTT 58.799 55.000 0.00 0.00 0.00 2.52
5628 7214 0.690077 GGACGGAGGGGGTATGTTCT 60.690 60.000 0.00 0.00 0.00 3.01
5629 7215 0.690077 AGGACGGAGGGGGTATGTTC 60.690 60.000 0.00 0.00 0.00 3.18
5630 7216 0.638292 TAGGACGGAGGGGGTATGTT 59.362 55.000 0.00 0.00 0.00 2.71
5631 7217 0.638292 TTAGGACGGAGGGGGTATGT 59.362 55.000 0.00 0.00 0.00 2.29
5632 7218 1.339097 CTTAGGACGGAGGGGGTATG 58.661 60.000 0.00 0.00 0.00 2.39
5633 7219 0.939698 ACTTAGGACGGAGGGGGTAT 59.060 55.000 0.00 0.00 0.00 2.73
5634 7220 0.259938 GACTTAGGACGGAGGGGGTA 59.740 60.000 0.00 0.00 0.00 3.69
5635 7221 1.001376 GACTTAGGACGGAGGGGGT 59.999 63.158 0.00 0.00 0.00 4.95
5636 7222 1.761271 GGACTTAGGACGGAGGGGG 60.761 68.421 0.00 0.00 0.00 5.40
5637 7223 2.125961 CGGACTTAGGACGGAGGGG 61.126 68.421 0.00 0.00 0.00 4.79
5638 7224 2.783288 GCGGACTTAGGACGGAGGG 61.783 68.421 0.00 0.00 0.00 4.30
5639 7225 2.806237 GCGGACTTAGGACGGAGG 59.194 66.667 0.00 0.00 0.00 4.30
5640 7226 2.110967 TCGCGGACTTAGGACGGAG 61.111 63.158 6.13 0.00 0.00 4.63
5641 7227 2.046023 TCGCGGACTTAGGACGGA 60.046 61.111 6.13 0.00 0.00 4.69
5642 7228 2.101770 GTCGCGGACTTAGGACGG 59.898 66.667 6.13 0.00 0.00 4.79
5643 7229 1.513586 GTGTCGCGGACTTAGGACG 60.514 63.158 6.13 0.00 33.15 4.79
5644 7230 0.243095 AAGTGTCGCGGACTTAGGAC 59.757 55.000 18.96 3.31 31.72 3.85
5645 7231 1.825090 TAAGTGTCGCGGACTTAGGA 58.175 50.000 20.77 7.75 35.30 2.94
5646 7232 2.865343 ATAAGTGTCGCGGACTTAGG 57.135 50.000 25.46 0.00 38.87 2.69
5647 7233 5.231568 CCTAAAATAAGTGTCGCGGACTTAG 59.768 44.000 25.46 17.68 38.87 2.18
5648 7234 5.104374 CCTAAAATAAGTGTCGCGGACTTA 58.896 41.667 24.43 24.43 39.60 2.24
5649 7235 3.930848 CCTAAAATAAGTGTCGCGGACTT 59.069 43.478 22.38 22.38 37.43 3.01
5650 7236 3.194116 TCCTAAAATAAGTGTCGCGGACT 59.806 43.478 6.13 6.02 33.15 3.85
5651 7237 3.305361 GTCCTAAAATAAGTGTCGCGGAC 59.695 47.826 6.13 3.28 32.64 4.79
5652 7238 3.514645 GTCCTAAAATAAGTGTCGCGGA 58.485 45.455 6.13 0.00 0.00 5.54
5653 7239 2.280708 CGTCCTAAAATAAGTGTCGCGG 59.719 50.000 6.13 0.00 0.00 6.46
5654 7240 2.280708 CCGTCCTAAAATAAGTGTCGCG 59.719 50.000 0.00 0.00 0.00 5.87
5655 7241 3.514645 TCCGTCCTAAAATAAGTGTCGC 58.485 45.455 0.00 0.00 0.00 5.19
5656 7242 4.110482 CCTCCGTCCTAAAATAAGTGTCG 58.890 47.826 0.00 0.00 0.00 4.35
5657 7243 4.161001 TCCCTCCGTCCTAAAATAAGTGTC 59.839 45.833 0.00 0.00 0.00 3.67
5658 7244 4.098894 TCCCTCCGTCCTAAAATAAGTGT 58.901 43.478 0.00 0.00 0.00 3.55
5659 7245 4.161754 ACTCCCTCCGTCCTAAAATAAGTG 59.838 45.833 0.00 0.00 0.00 3.16
5660 7246 4.161754 CACTCCCTCCGTCCTAAAATAAGT 59.838 45.833 0.00 0.00 0.00 2.24
5661 7247 4.694339 CACTCCCTCCGTCCTAAAATAAG 58.306 47.826 0.00 0.00 0.00 1.73
5662 7248 3.118519 GCACTCCCTCCGTCCTAAAATAA 60.119 47.826 0.00 0.00 0.00 1.40
5663 7249 2.433239 GCACTCCCTCCGTCCTAAAATA 59.567 50.000 0.00 0.00 0.00 1.40
5664 7250 1.209747 GCACTCCCTCCGTCCTAAAAT 59.790 52.381 0.00 0.00 0.00 1.82
5665 7251 0.611714 GCACTCCCTCCGTCCTAAAA 59.388 55.000 0.00 0.00 0.00 1.52
5666 7252 0.252103 AGCACTCCCTCCGTCCTAAA 60.252 55.000 0.00 0.00 0.00 1.85
5667 7253 0.627451 TAGCACTCCCTCCGTCCTAA 59.373 55.000 0.00 0.00 0.00 2.69
5668 7254 0.851469 ATAGCACTCCCTCCGTCCTA 59.149 55.000 0.00 0.00 0.00 2.94
5669 7255 0.851469 TATAGCACTCCCTCCGTCCT 59.149 55.000 0.00 0.00 0.00 3.85
5670 7256 0.960286 GTATAGCACTCCCTCCGTCC 59.040 60.000 0.00 0.00 0.00 4.79
5671 7257 1.688772 TGTATAGCACTCCCTCCGTC 58.311 55.000 0.00 0.00 0.00 4.79
5672 7258 1.755380 GTTGTATAGCACTCCCTCCGT 59.245 52.381 0.00 0.00 0.00 4.69
5673 7259 1.269102 CGTTGTATAGCACTCCCTCCG 60.269 57.143 0.00 0.00 0.00 4.63
5674 7260 2.029623 TCGTTGTATAGCACTCCCTCC 58.970 52.381 0.00 0.00 0.00 4.30
5675 7261 3.795623 TTCGTTGTATAGCACTCCCTC 57.204 47.619 0.00 0.00 0.00 4.30
5676 7262 4.755266 AATTCGTTGTATAGCACTCCCT 57.245 40.909 0.00 0.00 0.00 4.20
5677 7263 5.598769 AGTAATTCGTTGTATAGCACTCCC 58.401 41.667 0.00 0.00 0.00 4.30
5678 7264 6.979238 AGAAGTAATTCGTTGTATAGCACTCC 59.021 38.462 0.00 0.00 0.00 3.85
5679 7265 7.988904 AGAAGTAATTCGTTGTATAGCACTC 57.011 36.000 0.00 0.00 0.00 3.51
5680 7266 9.517609 CTAAGAAGTAATTCGTTGTATAGCACT 57.482 33.333 0.00 0.00 0.00 4.40
5681 7267 9.298774 ACTAAGAAGTAATTCGTTGTATAGCAC 57.701 33.333 4.45 0.00 32.84 4.40
5682 7268 9.865321 AACTAAGAAGTAATTCGTTGTATAGCA 57.135 29.630 6.40 0.00 33.75 3.49
5688 7274 8.015658 GCAATCAACTAAGAAGTAATTCGTTGT 58.984 33.333 16.37 9.91 35.78 3.32
5689 7275 8.015087 TGCAATCAACTAAGAAGTAATTCGTTG 58.985 33.333 12.87 12.87 35.68 4.10
5690 7276 8.094798 TGCAATCAACTAAGAAGTAATTCGTT 57.905 30.769 0.00 0.00 33.75 3.85
5691 7277 7.667043 TGCAATCAACTAAGAAGTAATTCGT 57.333 32.000 0.00 0.00 33.75 3.85
5692 7278 9.559958 AATTGCAATCAACTAAGAAGTAATTCG 57.440 29.630 13.38 0.00 33.75 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.