Multiple sequence alignment - TraesCS3B01G321800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G321800 chr3B 100.000 2723 0 0 1 2723 521404319 521407041 0.000000e+00 5029
1 TraesCS3B01G321800 chr3B 95.660 1083 37 6 610 1688 521475854 521476930 0.000000e+00 1731
2 TraesCS3B01G321800 chr3B 94.429 1059 38 3 1684 2723 13523517 13522461 0.000000e+00 1609
3 TraesCS3B01G321800 chr3B 93.566 1088 54 12 610 1688 521216752 521217832 0.000000e+00 1607
4 TraesCS3B01G321800 chr3B 93.617 1081 48 6 610 1688 521609294 521610355 0.000000e+00 1594
5 TraesCS3B01G321800 chr3B 94.062 1061 41 6 1684 2723 13551580 13550521 0.000000e+00 1591
6 TraesCS3B01G321800 chr3B 94.411 984 45 6 709 1688 521687801 521688778 0.000000e+00 1504
7 TraesCS3B01G321800 chr3B 90.566 1060 69 7 1689 2723 575281031 575279978 0.000000e+00 1375
8 TraesCS3B01G321800 chr3B 90.000 110 9 2 610 718 521684984 521685092 1.020000e-29 141
9 TraesCS3B01G321800 chr2A 98.842 1036 12 0 1688 2723 704012641 704013676 0.000000e+00 1847
10 TraesCS3B01G321800 chr3D 94.640 1082 45 8 610 1688 396204778 396205849 0.000000e+00 1664
11 TraesCS3B01G321800 chr3D 92.472 1076 43 17 617 1688 395836985 395838026 0.000000e+00 1504
12 TraesCS3B01G321800 chr3D 91.497 1082 44 14 610 1688 395832604 395833640 0.000000e+00 1445
13 TraesCS3B01G321800 chr1B 94.882 1055 31 5 1689 2723 539843681 539844732 0.000000e+00 1628
14 TraesCS3B01G321800 chr1B 87.868 882 72 10 1689 2540 548682306 548683182 0.000000e+00 1003
15 TraesCS3B01G321800 chr3A 89.699 1097 62 27 610 1688 515860830 515861893 0.000000e+00 1352
16 TraesCS3B01G321800 chr7D 89.626 1070 78 16 1685 2723 525763825 525762758 0.000000e+00 1330
17 TraesCS3B01G321800 chr4D 89.242 1069 77 18 1689 2723 488872707 488871643 0.000000e+00 1303
18 TraesCS3B01G321800 chr4D 93.237 414 23 3 2315 2723 176786383 176786796 3.000000e-169 604
19 TraesCS3B01G321800 chr6D 89.033 1076 83 13 1681 2723 45803632 45802559 0.000000e+00 1301
20 TraesCS3B01G321800 chr7A 88.469 1084 76 25 1688 2723 689944317 689943235 0.000000e+00 1264


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G321800 chr3B 521404319 521407041 2722 False 5029.0 5029 100.0000 1 2723 1 chr3B.!!$F2 2722
1 TraesCS3B01G321800 chr3B 521475854 521476930 1076 False 1731.0 1731 95.6600 610 1688 1 chr3B.!!$F3 1078
2 TraesCS3B01G321800 chr3B 13522461 13523517 1056 True 1609.0 1609 94.4290 1684 2723 1 chr3B.!!$R1 1039
3 TraesCS3B01G321800 chr3B 521216752 521217832 1080 False 1607.0 1607 93.5660 610 1688 1 chr3B.!!$F1 1078
4 TraesCS3B01G321800 chr3B 521609294 521610355 1061 False 1594.0 1594 93.6170 610 1688 1 chr3B.!!$F4 1078
5 TraesCS3B01G321800 chr3B 13550521 13551580 1059 True 1591.0 1591 94.0620 1684 2723 1 chr3B.!!$R2 1039
6 TraesCS3B01G321800 chr3B 575279978 575281031 1053 True 1375.0 1375 90.5660 1689 2723 1 chr3B.!!$R3 1034
7 TraesCS3B01G321800 chr3B 521684984 521688778 3794 False 822.5 1504 92.2055 610 1688 2 chr3B.!!$F5 1078
8 TraesCS3B01G321800 chr2A 704012641 704013676 1035 False 1847.0 1847 98.8420 1688 2723 1 chr2A.!!$F1 1035
9 TraesCS3B01G321800 chr3D 396204778 396205849 1071 False 1664.0 1664 94.6400 610 1688 1 chr3D.!!$F1 1078
10 TraesCS3B01G321800 chr3D 395832604 395838026 5422 False 1474.5 1504 91.9845 610 1688 2 chr3D.!!$F2 1078
11 TraesCS3B01G321800 chr1B 539843681 539844732 1051 False 1628.0 1628 94.8820 1689 2723 1 chr1B.!!$F1 1034
12 TraesCS3B01G321800 chr1B 548682306 548683182 876 False 1003.0 1003 87.8680 1689 2540 1 chr1B.!!$F2 851
13 TraesCS3B01G321800 chr3A 515860830 515861893 1063 False 1352.0 1352 89.6990 610 1688 1 chr3A.!!$F1 1078
14 TraesCS3B01G321800 chr7D 525762758 525763825 1067 True 1330.0 1330 89.6260 1685 2723 1 chr7D.!!$R1 1038
15 TraesCS3B01G321800 chr4D 488871643 488872707 1064 True 1303.0 1303 89.2420 1689 2723 1 chr4D.!!$R1 1034
16 TraesCS3B01G321800 chr6D 45802559 45803632 1073 True 1301.0 1301 89.0330 1681 2723 1 chr6D.!!$R1 1042
17 TraesCS3B01G321800 chr7A 689943235 689944317 1082 True 1264.0 1264 88.4690 1688 2723 1 chr7A.!!$R1 1035

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
322 323 0.037326 AGTCGCGCCTTTGAATCTGA 60.037 50.0 0.0 0.0 0.00 3.27 F
558 559 0.038892 TTCGTGACTTCCCTGTACGC 60.039 55.0 0.0 0.0 34.98 4.42 F
926 8044 0.111704 CGTCAAAGACTCAACGCACG 60.112 55.0 0.0 0.0 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1144 8268 2.124403 GTGCAGCTCCCCCATGAG 60.124 66.667 0.0 0.0 35.40 2.90 R
1671 8798 2.435586 CCCTTGCTGTCGCTCCAG 60.436 66.667 0.0 0.0 36.97 3.86 R
2688 9884 3.519107 TCAGAACCAAGATGCTCCATACA 59.481 43.478 0.0 0.0 0.00 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.932789 GCACAATAGACGGCCTGA 57.067 55.556 0.00 0.00 0.00 3.86
18 19 2.384203 GCACAATAGACGGCCTGAC 58.616 57.895 0.00 0.00 0.00 3.51
19 20 0.391130 GCACAATAGACGGCCTGACA 60.391 55.000 0.00 0.00 0.00 3.58
20 21 1.359848 CACAATAGACGGCCTGACAC 58.640 55.000 0.00 0.00 0.00 3.67
21 22 0.108804 ACAATAGACGGCCTGACACG 60.109 55.000 0.00 0.00 0.00 4.49
22 23 1.153628 AATAGACGGCCTGACACGC 60.154 57.895 0.00 0.00 0.00 5.34
23 24 2.573609 AATAGACGGCCTGACACGCC 62.574 60.000 0.00 5.45 43.38 5.68
28 29 2.594592 GGCCTGACACGCCAAGTT 60.595 61.111 10.25 0.00 46.27 2.66
29 30 2.639286 GCCTGACACGCCAAGTTG 59.361 61.111 0.00 0.00 0.00 3.16
30 31 2.908073 GCCTGACACGCCAAGTTGG 61.908 63.158 18.17 18.17 41.55 3.77
39 40 2.203538 CCAAGTTGGCAGGTGGCT 60.204 61.111 9.46 0.00 44.01 4.75
40 41 2.270986 CCAAGTTGGCAGGTGGCTC 61.271 63.158 9.46 0.00 44.01 4.70
41 42 1.529010 CAAGTTGGCAGGTGGCTCA 60.529 57.895 5.03 0.00 44.01 4.26
42 43 1.108727 CAAGTTGGCAGGTGGCTCAA 61.109 55.000 5.03 0.00 44.01 3.02
43 44 0.825010 AAGTTGGCAGGTGGCTCAAG 60.825 55.000 5.03 0.00 44.01 3.02
44 45 2.115910 TTGGCAGGTGGCTCAAGG 59.884 61.111 5.03 0.00 44.01 3.61
45 46 2.459969 TTGGCAGGTGGCTCAAGGA 61.460 57.895 5.03 0.00 44.01 3.36
46 47 1.792757 TTGGCAGGTGGCTCAAGGAT 61.793 55.000 5.03 0.00 44.01 3.24
47 48 1.452833 GGCAGGTGGCTCAAGGATC 60.453 63.158 0.00 0.00 44.01 3.36
48 49 1.606531 GCAGGTGGCTCAAGGATCT 59.393 57.895 0.00 0.00 40.25 2.75
49 50 0.833287 GCAGGTGGCTCAAGGATCTA 59.167 55.000 0.00 0.00 40.25 1.98
50 51 1.474143 GCAGGTGGCTCAAGGATCTAC 60.474 57.143 0.00 0.00 40.25 2.59
51 52 1.833630 CAGGTGGCTCAAGGATCTACA 59.166 52.381 0.00 0.00 0.00 2.74
52 53 2.237143 CAGGTGGCTCAAGGATCTACAA 59.763 50.000 0.00 0.00 0.00 2.41
53 54 2.503356 AGGTGGCTCAAGGATCTACAAG 59.497 50.000 0.00 0.00 0.00 3.16
54 55 2.420687 GGTGGCTCAAGGATCTACAAGG 60.421 54.545 0.00 0.00 0.00 3.61
55 56 1.210478 TGGCTCAAGGATCTACAAGGC 59.790 52.381 0.00 0.00 0.00 4.35
56 57 1.475930 GGCTCAAGGATCTACAAGGCC 60.476 57.143 0.00 0.00 0.00 5.19
57 58 1.210478 GCTCAAGGATCTACAAGGCCA 59.790 52.381 5.01 0.00 0.00 5.36
58 59 2.356125 GCTCAAGGATCTACAAGGCCAA 60.356 50.000 5.01 0.00 0.00 4.52
59 60 3.873801 GCTCAAGGATCTACAAGGCCAAA 60.874 47.826 5.01 0.00 0.00 3.28
60 61 4.530875 CTCAAGGATCTACAAGGCCAAAT 58.469 43.478 5.01 0.00 0.00 2.32
61 62 4.934356 TCAAGGATCTACAAGGCCAAATT 58.066 39.130 5.01 0.00 0.00 1.82
62 63 5.332743 TCAAGGATCTACAAGGCCAAATTT 58.667 37.500 5.01 0.00 0.00 1.82
63 64 5.185635 TCAAGGATCTACAAGGCCAAATTTG 59.814 40.000 11.40 11.40 0.00 2.32
64 65 3.448660 AGGATCTACAAGGCCAAATTTGC 59.551 43.478 12.92 8.18 0.00 3.68
65 66 3.195396 GGATCTACAAGGCCAAATTTGCA 59.805 43.478 12.92 0.00 0.00 4.08
66 67 3.940209 TCTACAAGGCCAAATTTGCAG 57.060 42.857 12.92 0.35 0.00 4.41
67 68 2.562298 TCTACAAGGCCAAATTTGCAGG 59.438 45.455 12.92 0.48 0.00 4.85
68 69 1.130777 ACAAGGCCAAATTTGCAGGT 58.869 45.000 12.92 3.45 0.00 4.00
69 70 1.202675 ACAAGGCCAAATTTGCAGGTG 60.203 47.619 12.92 9.94 0.00 4.00
70 71 0.397564 AAGGCCAAATTTGCAGGTGG 59.602 50.000 12.92 0.00 0.00 4.61
88 89 2.940561 CACGGCCGGTGTACAAAC 59.059 61.111 31.76 0.00 41.89 2.93
89 90 1.888172 CACGGCCGGTGTACAAACA 60.888 57.895 31.76 0.00 41.89 2.83
101 102 4.848562 TGTACAAACACACCAAACACAA 57.151 36.364 0.00 0.00 0.00 3.33
102 103 4.799678 TGTACAAACACACCAAACACAAG 58.200 39.130 0.00 0.00 0.00 3.16
103 104 3.311486 ACAAACACACCAAACACAAGG 57.689 42.857 0.00 0.00 0.00 3.61
104 105 2.028567 ACAAACACACCAAACACAAGGG 60.029 45.455 0.00 0.00 0.00 3.95
105 106 0.534873 AACACACCAAACACAAGGGC 59.465 50.000 0.00 0.00 0.00 5.19
106 107 1.065600 CACACCAAACACAAGGGCG 59.934 57.895 0.00 0.00 0.00 6.13
107 108 1.379309 ACACCAAACACAAGGGCGT 60.379 52.632 0.00 0.00 0.00 5.68
108 109 0.107116 ACACCAAACACAAGGGCGTA 60.107 50.000 0.00 0.00 0.00 4.42
109 110 0.309612 CACCAAACACAAGGGCGTAC 59.690 55.000 0.00 0.00 0.00 3.67
110 111 0.181824 ACCAAACACAAGGGCGTACT 59.818 50.000 0.00 0.00 0.00 2.73
111 112 1.314730 CCAAACACAAGGGCGTACTT 58.685 50.000 0.00 0.00 0.00 2.24
112 113 2.158784 ACCAAACACAAGGGCGTACTTA 60.159 45.455 0.00 0.00 0.00 2.24
113 114 3.078837 CCAAACACAAGGGCGTACTTAT 58.921 45.455 0.00 0.00 0.00 1.73
114 115 4.255301 CCAAACACAAGGGCGTACTTATA 58.745 43.478 0.00 0.00 0.00 0.98
115 116 4.879545 CCAAACACAAGGGCGTACTTATAT 59.120 41.667 0.00 0.00 0.00 0.86
116 117 5.355910 CCAAACACAAGGGCGTACTTATATT 59.644 40.000 0.00 0.00 0.00 1.28
117 118 6.127842 CCAAACACAAGGGCGTACTTATATTT 60.128 38.462 0.00 0.00 0.00 1.40
118 119 6.673154 AACACAAGGGCGTACTTATATTTC 57.327 37.500 0.00 0.00 0.00 2.17
119 120 5.985911 ACACAAGGGCGTACTTATATTTCT 58.014 37.500 0.00 0.00 0.00 2.52
120 121 7.116075 ACACAAGGGCGTACTTATATTTCTA 57.884 36.000 0.00 0.00 0.00 2.10
121 122 7.558604 ACACAAGGGCGTACTTATATTTCTAA 58.441 34.615 0.00 0.00 0.00 2.10
122 123 8.042515 ACACAAGGGCGTACTTATATTTCTAAA 58.957 33.333 0.00 0.00 0.00 1.85
123 124 8.885722 CACAAGGGCGTACTTATATTTCTAAAA 58.114 33.333 0.00 0.00 0.00 1.52
124 125 8.886719 ACAAGGGCGTACTTATATTTCTAAAAC 58.113 33.333 0.00 0.00 0.00 2.43
125 126 7.704789 AGGGCGTACTTATATTTCTAAAACG 57.295 36.000 0.00 0.00 0.00 3.60
126 127 6.201615 AGGGCGTACTTATATTTCTAAAACGC 59.798 38.462 7.42 7.42 41.06 4.84
127 128 6.357980 GGCGTACTTATATTTCTAAAACGCC 58.642 40.000 17.72 17.72 46.90 5.68
128 129 6.060773 GCGTACTTATATTTCTAAAACGCCG 58.939 40.000 4.81 0.00 38.65 6.46
129 130 6.291796 GCGTACTTATATTTCTAAAACGCCGT 60.292 38.462 4.81 0.00 38.65 5.68
130 131 7.096640 GCGTACTTATATTTCTAAAACGCCGTA 60.097 37.037 4.81 0.00 38.65 4.02
131 132 8.201401 CGTACTTATATTTCTAAAACGCCGTAC 58.799 37.037 0.00 0.00 0.00 3.67
132 133 7.468922 ACTTATATTTCTAAAACGCCGTACC 57.531 36.000 0.00 0.00 0.00 3.34
133 134 7.041107 ACTTATATTTCTAAAACGCCGTACCA 58.959 34.615 0.00 0.00 0.00 3.25
134 135 7.712205 ACTTATATTTCTAAAACGCCGTACCAT 59.288 33.333 0.00 0.00 0.00 3.55
135 136 9.195411 CTTATATTTCTAAAACGCCGTACCATA 57.805 33.333 0.00 0.00 0.00 2.74
136 137 9.539825 TTATATTTCTAAAACGCCGTACCATAA 57.460 29.630 0.00 0.00 0.00 1.90
137 138 5.783100 TTTCTAAAACGCCGTACCATAAG 57.217 39.130 0.00 0.00 0.00 1.73
138 139 3.784338 TCTAAAACGCCGTACCATAAGG 58.216 45.455 0.00 0.00 42.21 2.69
142 143 4.840168 GCCGTACCATAAGGCGAA 57.160 55.556 0.00 0.00 43.11 4.70
143 144 3.300711 GCCGTACCATAAGGCGAAT 57.699 52.632 0.00 0.00 43.11 3.34
144 145 1.145803 GCCGTACCATAAGGCGAATC 58.854 55.000 0.00 0.00 43.11 2.52
145 146 1.539496 GCCGTACCATAAGGCGAATCA 60.539 52.381 0.00 0.00 43.11 2.57
146 147 2.870435 GCCGTACCATAAGGCGAATCAT 60.870 50.000 0.00 0.00 43.11 2.45
147 148 2.993899 CCGTACCATAAGGCGAATCATC 59.006 50.000 0.00 0.00 39.06 2.92
148 149 3.306088 CCGTACCATAAGGCGAATCATCT 60.306 47.826 0.00 0.00 39.06 2.90
149 150 4.307432 CGTACCATAAGGCGAATCATCTT 58.693 43.478 0.00 0.00 39.06 2.40
150 151 4.750098 CGTACCATAAGGCGAATCATCTTT 59.250 41.667 0.00 0.00 39.06 2.52
151 152 5.333339 CGTACCATAAGGCGAATCATCTTTG 60.333 44.000 0.00 0.00 39.06 2.77
152 153 4.780815 ACCATAAGGCGAATCATCTTTGA 58.219 39.130 0.00 0.00 39.06 2.69
153 154 5.192927 ACCATAAGGCGAATCATCTTTGAA 58.807 37.500 0.00 0.00 39.06 2.69
154 155 5.652014 ACCATAAGGCGAATCATCTTTGAAA 59.348 36.000 0.00 0.00 39.06 2.69
155 156 5.973565 CCATAAGGCGAATCATCTTTGAAAC 59.026 40.000 0.00 0.00 34.96 2.78
156 157 6.404623 CCATAAGGCGAATCATCTTTGAAACA 60.405 38.462 0.00 0.00 34.96 2.83
157 158 4.425577 AGGCGAATCATCTTTGAAACAC 57.574 40.909 0.00 0.00 34.96 3.32
158 159 3.120199 AGGCGAATCATCTTTGAAACACG 60.120 43.478 0.00 0.00 34.96 4.49
159 160 2.589841 GCGAATCATCTTTGAAACACGC 59.410 45.455 0.00 0.00 36.60 5.34
160 161 3.163594 CGAATCATCTTTGAAACACGCC 58.836 45.455 0.00 0.00 34.96 5.68
161 162 3.364864 CGAATCATCTTTGAAACACGCCA 60.365 43.478 0.00 0.00 34.96 5.69
162 163 4.545610 GAATCATCTTTGAAACACGCCAA 58.454 39.130 0.00 0.00 34.96 4.52
163 164 4.582701 ATCATCTTTGAAACACGCCAAA 57.417 36.364 0.00 0.00 34.96 3.28
164 165 4.582701 TCATCTTTGAAACACGCCAAAT 57.417 36.364 0.00 0.00 32.60 2.32
165 166 4.942852 TCATCTTTGAAACACGCCAAATT 58.057 34.783 0.00 0.00 32.60 1.82
166 167 6.078202 TCATCTTTGAAACACGCCAAATTA 57.922 33.333 0.00 0.00 32.60 1.40
167 168 6.507900 TCATCTTTGAAACACGCCAAATTAA 58.492 32.000 0.00 0.00 32.60 1.40
168 169 6.419413 TCATCTTTGAAACACGCCAAATTAAC 59.581 34.615 0.00 0.00 32.60 2.01
169 170 4.735822 TCTTTGAAACACGCCAAATTAACG 59.264 37.500 0.00 0.00 32.60 3.18
170 171 3.001395 TGAAACACGCCAAATTAACGG 57.999 42.857 0.00 0.00 0.00 4.44
171 172 2.617308 TGAAACACGCCAAATTAACGGA 59.383 40.909 0.00 0.00 0.00 4.69
172 173 3.253677 TGAAACACGCCAAATTAACGGAT 59.746 39.130 0.00 0.00 0.00 4.18
173 174 2.911819 ACACGCCAAATTAACGGATG 57.088 45.000 0.00 0.00 0.00 3.51
174 175 2.156098 ACACGCCAAATTAACGGATGT 58.844 42.857 0.00 0.00 0.00 3.06
175 176 2.095466 ACACGCCAAATTAACGGATGTG 60.095 45.455 10.29 10.29 36.68 3.21
176 177 2.095466 CACGCCAAATTAACGGATGTGT 60.095 45.455 0.00 0.00 0.00 3.72
177 178 2.554893 ACGCCAAATTAACGGATGTGTT 59.445 40.909 0.00 0.00 35.86 3.32
178 179 3.004944 ACGCCAAATTAACGGATGTGTTT 59.995 39.130 0.00 0.00 33.32 2.83
179 180 3.363426 CGCCAAATTAACGGATGTGTTTG 59.637 43.478 0.00 0.00 33.32 2.93
180 181 4.303282 GCCAAATTAACGGATGTGTTTGT 58.697 39.130 0.00 0.00 33.32 2.83
181 182 5.462405 GCCAAATTAACGGATGTGTTTGTA 58.538 37.500 0.00 0.00 33.32 2.41
182 183 6.096695 GCCAAATTAACGGATGTGTTTGTAT 58.903 36.000 0.00 0.00 33.32 2.29
183 184 6.588373 GCCAAATTAACGGATGTGTTTGTATT 59.412 34.615 0.00 0.00 33.32 1.89
184 185 7.201401 GCCAAATTAACGGATGTGTTTGTATTC 60.201 37.037 0.00 0.00 33.32 1.75
185 186 7.810282 CCAAATTAACGGATGTGTTTGTATTCA 59.190 33.333 0.00 0.00 33.32 2.57
186 187 9.352784 CAAATTAACGGATGTGTTTGTATTCAT 57.647 29.630 0.00 0.00 33.32 2.57
187 188 8.909708 AATTAACGGATGTGTTTGTATTCATG 57.090 30.769 0.00 0.00 33.32 3.07
188 189 5.957842 AACGGATGTGTTTGTATTCATGT 57.042 34.783 0.00 0.00 0.00 3.21
189 190 5.957842 ACGGATGTGTTTGTATTCATGTT 57.042 34.783 0.00 0.00 0.00 2.71
190 191 6.325919 ACGGATGTGTTTGTATTCATGTTT 57.674 33.333 0.00 0.00 0.00 2.83
191 192 6.744112 ACGGATGTGTTTGTATTCATGTTTT 58.256 32.000 0.00 0.00 0.00 2.43
192 193 6.640499 ACGGATGTGTTTGTATTCATGTTTTG 59.360 34.615 0.00 0.00 0.00 2.44
193 194 6.860539 CGGATGTGTTTGTATTCATGTTTTGA 59.139 34.615 0.00 0.00 0.00 2.69
194 195 7.148983 CGGATGTGTTTGTATTCATGTTTTGAC 60.149 37.037 0.00 0.00 32.84 3.18
195 196 7.148983 GGATGTGTTTGTATTCATGTTTTGACG 60.149 37.037 0.00 0.00 32.84 4.35
196 197 5.457148 TGTGTTTGTATTCATGTTTTGACGC 59.543 36.000 0.00 0.00 32.84 5.19
197 198 4.979197 TGTTTGTATTCATGTTTTGACGCC 59.021 37.500 0.00 0.00 32.84 5.68
198 199 5.219633 GTTTGTATTCATGTTTTGACGCCT 58.780 37.500 0.00 0.00 32.84 5.52
199 200 4.418013 TGTATTCATGTTTTGACGCCTG 57.582 40.909 0.00 0.00 32.84 4.85
200 201 3.818210 TGTATTCATGTTTTGACGCCTGT 59.182 39.130 0.00 0.00 32.84 4.00
201 202 3.559238 ATTCATGTTTTGACGCCTGTC 57.441 42.857 0.00 0.00 45.71 3.51
217 218 4.600012 CCTGTCACTTAGGCGTTTTATG 57.400 45.455 0.00 0.00 0.00 1.90
218 219 4.250464 CCTGTCACTTAGGCGTTTTATGA 58.750 43.478 0.00 0.00 0.00 2.15
219 220 4.330074 CCTGTCACTTAGGCGTTTTATGAG 59.670 45.833 0.00 0.00 0.00 2.90
220 221 4.890088 TGTCACTTAGGCGTTTTATGAGT 58.110 39.130 0.00 0.00 0.00 3.41
221 222 6.028146 TGTCACTTAGGCGTTTTATGAGTA 57.972 37.500 0.00 0.00 0.00 2.59
222 223 5.865552 TGTCACTTAGGCGTTTTATGAGTAC 59.134 40.000 0.00 0.00 0.00 2.73
223 224 5.865552 GTCACTTAGGCGTTTTATGAGTACA 59.134 40.000 0.00 0.00 0.00 2.90
224 225 6.534079 GTCACTTAGGCGTTTTATGAGTACAT 59.466 38.462 0.00 0.00 40.16 2.29
225 226 6.755141 TCACTTAGGCGTTTTATGAGTACATC 59.245 38.462 0.00 0.00 37.87 3.06
226 227 6.533723 CACTTAGGCGTTTTATGAGTACATCA 59.466 38.462 0.00 0.00 43.70 3.07
227 228 7.064134 CACTTAGGCGTTTTATGAGTACATCAA 59.936 37.037 0.00 0.00 42.53 2.57
228 229 7.604927 ACTTAGGCGTTTTATGAGTACATCAAA 59.395 33.333 0.00 0.00 42.53 2.69
229 230 6.811253 AGGCGTTTTATGAGTACATCAAAA 57.189 33.333 0.00 0.00 42.53 2.44
230 231 6.608610 AGGCGTTTTATGAGTACATCAAAAC 58.391 36.000 0.00 5.52 42.53 2.43
231 232 6.205853 AGGCGTTTTATGAGTACATCAAAACA 59.794 34.615 17.57 0.00 42.53 2.83
232 233 7.027161 GGCGTTTTATGAGTACATCAAAACAT 58.973 34.615 17.57 0.00 42.53 2.71
233 234 7.218204 GGCGTTTTATGAGTACATCAAAACATC 59.782 37.037 17.57 11.70 42.53 3.06
234 235 7.962918 GCGTTTTATGAGTACATCAAAACATCT 59.037 33.333 17.57 0.00 42.53 2.90
241 242 9.823647 ATGAGTACATCAAAACATCTAACTAGG 57.176 33.333 0.00 0.00 42.53 3.02
242 243 8.812972 TGAGTACATCAAAACATCTAACTAGGT 58.187 33.333 0.00 0.00 34.02 3.08
243 244 9.303537 GAGTACATCAAAACATCTAACTAGGTC 57.696 37.037 0.00 0.00 0.00 3.85
244 245 8.812972 AGTACATCAAAACATCTAACTAGGTCA 58.187 33.333 0.00 0.00 0.00 4.02
245 246 9.088512 GTACATCAAAACATCTAACTAGGTCAG 57.911 37.037 0.00 0.00 0.00 3.51
246 247 7.680730 ACATCAAAACATCTAACTAGGTCAGT 58.319 34.615 0.00 0.00 40.05 3.41
247 248 7.604164 ACATCAAAACATCTAACTAGGTCAGTG 59.396 37.037 0.00 0.00 37.63 3.66
248 249 6.464222 TCAAAACATCTAACTAGGTCAGTGG 58.536 40.000 0.00 0.00 37.63 4.00
249 250 6.269077 TCAAAACATCTAACTAGGTCAGTGGA 59.731 38.462 0.00 0.00 37.63 4.02
250 251 6.875972 AAACATCTAACTAGGTCAGTGGAT 57.124 37.500 0.00 0.00 37.63 3.41
251 252 5.860941 ACATCTAACTAGGTCAGTGGATG 57.139 43.478 13.95 13.95 44.85 3.51
252 253 5.273208 ACATCTAACTAGGTCAGTGGATGT 58.727 41.667 14.79 14.79 45.94 3.06
253 254 6.961360 CATCTAACTAGGTCAGTGGATGTA 57.039 41.667 0.00 0.00 40.14 2.29
254 255 6.740110 CATCTAACTAGGTCAGTGGATGTAC 58.260 44.000 0.00 0.00 40.14 2.90
255 256 6.075949 TCTAACTAGGTCAGTGGATGTACT 57.924 41.667 0.00 0.00 37.63 2.73
264 265 3.170791 AGTGGATGTACTGATGCGAAG 57.829 47.619 0.00 0.00 0.00 3.79
265 266 2.760650 AGTGGATGTACTGATGCGAAGA 59.239 45.455 0.00 0.00 0.00 2.87
266 267 3.386078 AGTGGATGTACTGATGCGAAGAT 59.614 43.478 0.00 0.00 0.00 2.40
267 268 3.492383 GTGGATGTACTGATGCGAAGATG 59.508 47.826 0.00 0.00 0.00 2.90
268 269 2.478134 GGATGTACTGATGCGAAGATGC 59.522 50.000 0.00 0.00 0.00 3.91
269 270 2.967599 TGTACTGATGCGAAGATGCT 57.032 45.000 0.00 0.00 35.36 3.79
270 271 2.814269 TGTACTGATGCGAAGATGCTC 58.186 47.619 0.00 0.00 35.36 4.26
271 272 1.783711 GTACTGATGCGAAGATGCTCG 59.216 52.381 0.00 0.00 41.84 5.03
272 273 0.457443 ACTGATGCGAAGATGCTCGA 59.543 50.000 0.00 0.00 41.44 4.04
273 274 0.851495 CTGATGCGAAGATGCTCGAC 59.149 55.000 0.00 0.00 41.44 4.20
274 275 0.173255 TGATGCGAAGATGCTCGACA 59.827 50.000 0.00 0.00 41.44 4.35
275 276 1.202452 TGATGCGAAGATGCTCGACAT 60.202 47.619 0.00 0.91 41.44 3.06
276 277 1.863454 GATGCGAAGATGCTCGACATT 59.137 47.619 0.00 0.00 41.44 2.71
277 278 1.001624 TGCGAAGATGCTCGACATTG 58.998 50.000 0.00 0.00 41.44 2.82
278 279 1.280982 GCGAAGATGCTCGACATTGA 58.719 50.000 0.00 0.00 41.44 2.57
279 280 1.660607 GCGAAGATGCTCGACATTGAA 59.339 47.619 0.00 0.00 41.44 2.69
280 281 2.094258 GCGAAGATGCTCGACATTGAAA 59.906 45.455 0.00 0.00 41.44 2.69
281 282 3.783548 GCGAAGATGCTCGACATTGAAAG 60.784 47.826 0.00 0.00 41.44 2.62
282 283 3.614176 CGAAGATGCTCGACATTGAAAGA 59.386 43.478 0.00 0.00 41.44 2.52
283 284 4.091945 CGAAGATGCTCGACATTGAAAGAA 59.908 41.667 0.00 0.00 41.44 2.52
284 285 4.935885 AGATGCTCGACATTGAAAGAAC 57.064 40.909 0.00 0.00 39.84 3.01
285 286 3.369147 AGATGCTCGACATTGAAAGAACG 59.631 43.478 0.00 0.00 39.84 3.95
286 287 1.194547 TGCTCGACATTGAAAGAACGC 59.805 47.619 0.00 0.00 0.00 4.84
287 288 1.464189 GCTCGACATTGAAAGAACGCC 60.464 52.381 0.00 0.00 0.00 5.68
288 289 1.798223 CTCGACATTGAAAGAACGCCA 59.202 47.619 0.00 0.00 0.00 5.69
289 290 1.798223 TCGACATTGAAAGAACGCCAG 59.202 47.619 0.00 0.00 0.00 4.85
290 291 1.798223 CGACATTGAAAGAACGCCAGA 59.202 47.619 0.00 0.00 0.00 3.86
291 292 2.416547 CGACATTGAAAGAACGCCAGAT 59.583 45.455 0.00 0.00 0.00 2.90
292 293 3.616821 CGACATTGAAAGAACGCCAGATA 59.383 43.478 0.00 0.00 0.00 1.98
293 294 4.271049 CGACATTGAAAGAACGCCAGATAT 59.729 41.667 0.00 0.00 0.00 1.63
294 295 5.220662 CGACATTGAAAGAACGCCAGATATT 60.221 40.000 0.00 0.00 0.00 1.28
295 296 6.124088 ACATTGAAAGAACGCCAGATATTC 57.876 37.500 0.00 0.00 0.00 1.75
296 297 5.882557 ACATTGAAAGAACGCCAGATATTCT 59.117 36.000 0.00 0.00 34.11 2.40
297 298 7.047891 ACATTGAAAGAACGCCAGATATTCTA 58.952 34.615 0.00 0.00 32.38 2.10
298 299 6.903883 TTGAAAGAACGCCAGATATTCTAC 57.096 37.500 0.00 0.00 32.38 2.59
299 300 5.357257 TGAAAGAACGCCAGATATTCTACC 58.643 41.667 0.00 0.00 32.38 3.18
300 301 5.105106 TGAAAGAACGCCAGATATTCTACCA 60.105 40.000 0.00 0.00 32.38 3.25
301 302 4.592485 AGAACGCCAGATATTCTACCAG 57.408 45.455 0.00 0.00 30.88 4.00
302 303 3.961408 AGAACGCCAGATATTCTACCAGT 59.039 43.478 0.00 0.00 30.88 4.00
303 304 5.138276 AGAACGCCAGATATTCTACCAGTA 58.862 41.667 0.00 0.00 30.88 2.74
304 305 5.241949 AGAACGCCAGATATTCTACCAGTAG 59.758 44.000 0.00 0.00 30.88 2.57
305 306 4.471548 ACGCCAGATATTCTACCAGTAGT 58.528 43.478 4.81 0.00 34.84 2.73
306 307 4.519730 ACGCCAGATATTCTACCAGTAGTC 59.480 45.833 4.81 0.00 34.84 2.59
307 308 4.378563 CGCCAGATATTCTACCAGTAGTCG 60.379 50.000 4.81 0.00 34.84 4.18
308 309 4.616373 GCCAGATATTCTACCAGTAGTCGC 60.616 50.000 4.81 0.00 34.84 5.19
309 310 4.378563 CCAGATATTCTACCAGTAGTCGCG 60.379 50.000 0.00 0.00 34.84 5.87
310 311 3.188873 AGATATTCTACCAGTAGTCGCGC 59.811 47.826 0.00 0.00 34.84 6.86
311 312 0.384669 ATTCTACCAGTAGTCGCGCC 59.615 55.000 0.00 0.00 34.84 6.53
312 313 0.679002 TTCTACCAGTAGTCGCGCCT 60.679 55.000 0.00 0.00 34.84 5.52
313 314 0.679002 TCTACCAGTAGTCGCGCCTT 60.679 55.000 0.00 0.00 34.84 4.35
314 315 0.172803 CTACCAGTAGTCGCGCCTTT 59.827 55.000 0.00 0.00 0.00 3.11
315 316 0.108992 TACCAGTAGTCGCGCCTTTG 60.109 55.000 0.00 0.00 0.00 2.77
316 317 1.080093 CCAGTAGTCGCGCCTTTGA 60.080 57.895 0.00 0.00 0.00 2.69
317 318 0.669318 CCAGTAGTCGCGCCTTTGAA 60.669 55.000 0.00 0.00 0.00 2.69
318 319 1.359848 CAGTAGTCGCGCCTTTGAAT 58.640 50.000 0.00 0.00 0.00 2.57
319 320 1.324736 CAGTAGTCGCGCCTTTGAATC 59.675 52.381 0.00 0.00 0.00 2.52
320 321 1.204941 AGTAGTCGCGCCTTTGAATCT 59.795 47.619 0.00 0.00 0.00 2.40
321 322 1.324736 GTAGTCGCGCCTTTGAATCTG 59.675 52.381 0.00 0.00 0.00 2.90
322 323 0.037326 AGTCGCGCCTTTGAATCTGA 60.037 50.000 0.00 0.00 0.00 3.27
323 324 0.095417 GTCGCGCCTTTGAATCTGAC 59.905 55.000 0.00 0.00 0.00 3.51
324 325 1.059369 CGCGCCTTTGAATCTGACG 59.941 57.895 0.00 0.00 0.00 4.35
325 326 1.226128 GCGCCTTTGAATCTGACGC 60.226 57.895 0.00 0.00 37.93 5.19
326 327 1.059369 CGCCTTTGAATCTGACGCG 59.941 57.895 3.53 3.53 0.00 6.01
327 328 1.626654 CGCCTTTGAATCTGACGCGT 61.627 55.000 13.85 13.85 33.82 6.01
328 329 0.095417 GCCTTTGAATCTGACGCGTC 59.905 55.000 31.66 31.66 0.00 5.19
329 330 1.428448 CCTTTGAATCTGACGCGTCA 58.572 50.000 36.96 36.96 38.06 4.35
330 331 2.002586 CCTTTGAATCTGACGCGTCAT 58.997 47.619 39.09 26.60 39.13 3.06
331 332 2.222886 CCTTTGAATCTGACGCGTCATG 60.223 50.000 39.09 30.34 39.13 3.07
332 333 2.078849 TTGAATCTGACGCGTCATGT 57.921 45.000 39.09 27.50 39.13 3.21
333 334 1.629013 TGAATCTGACGCGTCATGTC 58.371 50.000 39.09 31.93 39.13 3.06
334 335 0.567968 GAATCTGACGCGTCATGTCG 59.432 55.000 39.09 27.62 39.13 4.35
335 336 0.802222 AATCTGACGCGTCATGTCGG 60.802 55.000 39.09 27.26 42.78 4.79
336 337 3.545481 CTGACGCGTCATGTCGGC 61.545 66.667 39.09 12.92 39.13 5.54
359 360 2.858158 GCTGGTTGCGTTACCGAC 59.142 61.111 4.07 0.00 41.28 4.79
371 372 3.492421 GTTACCGACGACTATGAACCA 57.508 47.619 0.00 0.00 0.00 3.67
372 373 4.037858 GTTACCGACGACTATGAACCAT 57.962 45.455 0.00 0.00 0.00 3.55
373 374 2.579207 ACCGACGACTATGAACCATG 57.421 50.000 0.00 0.00 0.00 3.66
374 375 2.097036 ACCGACGACTATGAACCATGA 58.903 47.619 0.00 0.00 0.00 3.07
375 376 2.159282 ACCGACGACTATGAACCATGAC 60.159 50.000 0.00 0.00 0.00 3.06
376 377 2.460918 CGACGACTATGAACCATGACC 58.539 52.381 0.00 0.00 0.00 4.02
377 378 2.460918 GACGACTATGAACCATGACCG 58.539 52.381 0.00 0.00 0.00 4.79
378 379 1.136305 ACGACTATGAACCATGACCGG 59.864 52.381 0.00 0.00 0.00 5.28
379 380 1.136305 CGACTATGAACCATGACCGGT 59.864 52.381 6.92 6.92 42.71 5.28
380 381 2.798499 CGACTATGAACCATGACCGGTC 60.798 54.545 28.17 28.17 38.76 4.79
381 382 2.167693 GACTATGAACCATGACCGGTCA 59.832 50.000 37.79 37.79 44.59 4.02
382 383 2.569853 ACTATGAACCATGACCGGTCAA 59.430 45.455 39.04 23.13 43.58 3.18
383 384 2.577606 ATGAACCATGACCGGTCAAA 57.422 45.000 39.04 19.47 43.58 2.69
384 385 2.350057 TGAACCATGACCGGTCAAAA 57.650 45.000 39.04 18.66 43.58 2.44
385 386 2.870175 TGAACCATGACCGGTCAAAAT 58.130 42.857 39.04 25.03 43.58 1.82
386 387 2.817258 TGAACCATGACCGGTCAAAATC 59.183 45.455 39.04 30.30 43.58 2.17
387 388 2.577606 ACCATGACCGGTCAAAATCA 57.422 45.000 39.04 17.71 43.58 2.57
388 389 3.085952 ACCATGACCGGTCAAAATCAT 57.914 42.857 39.04 20.46 43.58 2.45
389 390 3.016736 ACCATGACCGGTCAAAATCATC 58.983 45.455 39.04 9.40 43.58 2.92
390 391 3.282021 CCATGACCGGTCAAAATCATCT 58.718 45.455 39.04 18.91 43.58 2.90
391 392 3.696051 CCATGACCGGTCAAAATCATCTT 59.304 43.478 39.04 18.14 43.58 2.40
392 393 4.158394 CCATGACCGGTCAAAATCATCTTT 59.842 41.667 39.04 17.37 43.58 2.52
393 394 4.764679 TGACCGGTCAAAATCATCTTTG 57.235 40.909 34.60 0.00 36.53 2.77
394 395 3.057596 TGACCGGTCAAAATCATCTTTGC 60.058 43.478 34.60 3.09 36.44 3.68
395 396 2.095263 ACCGGTCAAAATCATCTTTGCG 60.095 45.455 0.00 0.00 36.44 4.85
396 397 2.518949 CGGTCAAAATCATCTTTGCGG 58.481 47.619 0.00 0.00 36.44 5.69
397 398 2.161410 CGGTCAAAATCATCTTTGCGGA 59.839 45.455 0.00 0.00 36.44 5.54
398 399 3.501950 GGTCAAAATCATCTTTGCGGAC 58.498 45.455 0.00 0.00 36.44 4.79
399 400 3.057596 GGTCAAAATCATCTTTGCGGACA 60.058 43.478 0.00 0.00 36.44 4.02
400 401 4.161333 GTCAAAATCATCTTTGCGGACAG 58.839 43.478 0.00 0.00 36.44 3.51
423 424 2.716988 GCGACATGCAAGTGAAAGC 58.283 52.632 0.00 0.00 45.45 3.51
424 425 1.061799 GCGACATGCAAGTGAAAGCG 61.062 55.000 0.00 0.00 45.45 4.68
425 426 0.235665 CGACATGCAAGTGAAAGCGT 59.764 50.000 0.00 0.00 0.00 5.07
426 427 1.722751 CGACATGCAAGTGAAAGCGTC 60.723 52.381 0.00 0.00 0.00 5.19
427 428 1.532868 GACATGCAAGTGAAAGCGTCT 59.467 47.619 0.00 0.00 0.00 4.18
428 429 2.736721 GACATGCAAGTGAAAGCGTCTA 59.263 45.455 0.00 0.00 0.00 2.59
429 430 3.338249 ACATGCAAGTGAAAGCGTCTAT 58.662 40.909 0.00 0.00 0.00 1.98
430 431 3.753272 ACATGCAAGTGAAAGCGTCTATT 59.247 39.130 0.00 0.00 0.00 1.73
431 432 4.935205 ACATGCAAGTGAAAGCGTCTATTA 59.065 37.500 0.00 0.00 0.00 0.98
432 433 5.411361 ACATGCAAGTGAAAGCGTCTATTAA 59.589 36.000 0.00 0.00 0.00 1.40
433 434 6.094048 ACATGCAAGTGAAAGCGTCTATTAAT 59.906 34.615 0.00 0.00 0.00 1.40
434 435 6.106877 TGCAAGTGAAAGCGTCTATTAATC 57.893 37.500 0.00 0.00 0.00 1.75
435 436 5.641636 TGCAAGTGAAAGCGTCTATTAATCA 59.358 36.000 0.00 0.00 0.00 2.57
436 437 6.183360 TGCAAGTGAAAGCGTCTATTAATCAG 60.183 38.462 0.00 0.00 0.00 2.90
437 438 6.709643 CAAGTGAAAGCGTCTATTAATCAGG 58.290 40.000 0.00 0.00 0.00 3.86
438 439 4.811557 AGTGAAAGCGTCTATTAATCAGGC 59.188 41.667 0.00 0.00 0.00 4.85
439 440 3.802139 TGAAAGCGTCTATTAATCAGGCG 59.198 43.478 11.92 11.92 43.80 5.52
442 443 2.046283 CGTCTATTAATCAGGCGCGA 57.954 50.000 12.10 0.00 33.95 5.87
443 444 2.390938 CGTCTATTAATCAGGCGCGAA 58.609 47.619 12.10 0.00 33.95 4.70
444 445 2.987149 CGTCTATTAATCAGGCGCGAAT 59.013 45.455 12.10 0.37 33.95 3.34
445 446 3.181540 CGTCTATTAATCAGGCGCGAATG 60.182 47.826 12.10 7.61 33.95 2.67
446 447 3.123621 GTCTATTAATCAGGCGCGAATGG 59.876 47.826 12.10 0.21 0.00 3.16
447 448 1.238439 ATTAATCAGGCGCGAATGGG 58.762 50.000 12.10 0.00 0.00 4.00
448 449 0.817634 TTAATCAGGCGCGAATGGGG 60.818 55.000 12.10 0.00 0.00 4.96
449 450 1.691195 TAATCAGGCGCGAATGGGGA 61.691 55.000 12.10 0.00 0.00 4.81
450 451 3.757248 ATCAGGCGCGAATGGGGAC 62.757 63.158 12.10 0.00 36.70 4.46
461 462 3.859221 TGGGGACAGACGACGAAA 58.141 55.556 0.00 0.00 35.01 3.46
462 463 2.358039 TGGGGACAGACGACGAAAT 58.642 52.632 0.00 0.00 35.01 2.17
463 464 1.548081 TGGGGACAGACGACGAAATA 58.452 50.000 0.00 0.00 35.01 1.40
464 465 1.894466 TGGGGACAGACGACGAAATAA 59.106 47.619 0.00 0.00 35.01 1.40
465 466 2.094390 TGGGGACAGACGACGAAATAAG 60.094 50.000 0.00 0.00 35.01 1.73
466 467 2.094338 GGGGACAGACGACGAAATAAGT 60.094 50.000 0.00 0.00 0.00 2.24
467 468 3.582780 GGGACAGACGACGAAATAAGTT 58.417 45.455 0.00 0.00 0.00 2.66
468 469 3.992427 GGGACAGACGACGAAATAAGTTT 59.008 43.478 0.00 0.00 0.00 2.66
469 470 4.450080 GGGACAGACGACGAAATAAGTTTT 59.550 41.667 0.00 0.00 0.00 2.43
470 471 5.049886 GGGACAGACGACGAAATAAGTTTTT 60.050 40.000 0.00 0.00 0.00 1.94
485 486 2.935505 TTTTTGGGGTCATCGGACG 58.064 52.632 0.00 0.00 45.28 4.79
486 487 0.397187 TTTTTGGGGTCATCGGACGA 59.603 50.000 0.00 0.00 45.28 4.20
487 488 0.397187 TTTTGGGGTCATCGGACGAA 59.603 50.000 0.00 0.00 45.28 3.85
488 489 0.397187 TTTGGGGTCATCGGACGAAA 59.603 50.000 0.00 0.00 45.28 3.46
489 490 0.616371 TTGGGGTCATCGGACGAAAT 59.384 50.000 0.00 0.00 45.28 2.17
490 491 1.487300 TGGGGTCATCGGACGAAATA 58.513 50.000 0.00 0.00 45.28 1.40
491 492 1.832366 TGGGGTCATCGGACGAAATAA 59.168 47.619 0.00 0.00 45.28 1.40
492 493 2.159014 TGGGGTCATCGGACGAAATAAG 60.159 50.000 0.00 0.00 45.28 1.73
493 494 2.480845 GGGTCATCGGACGAAATAAGG 58.519 52.381 0.00 0.00 45.28 2.69
494 495 2.101917 GGGTCATCGGACGAAATAAGGA 59.898 50.000 0.00 0.00 45.28 3.36
495 496 3.121544 GGTCATCGGACGAAATAAGGAC 58.878 50.000 0.00 0.91 45.28 3.85
496 497 3.121544 GTCATCGGACGAAATAAGGACC 58.878 50.000 0.00 0.00 33.68 4.46
497 498 3.028850 TCATCGGACGAAATAAGGACCT 58.971 45.455 0.00 0.00 0.00 3.85
498 499 3.067742 TCATCGGACGAAATAAGGACCTC 59.932 47.826 0.00 0.00 0.00 3.85
499 500 2.449464 TCGGACGAAATAAGGACCTCA 58.551 47.619 0.00 0.00 0.00 3.86
500 501 2.426024 TCGGACGAAATAAGGACCTCAG 59.574 50.000 0.00 0.00 0.00 3.35
501 502 2.481449 CGGACGAAATAAGGACCTCAGG 60.481 54.545 0.00 0.00 0.00 3.86
502 503 2.158943 GGACGAAATAAGGACCTCAGGG 60.159 54.545 0.00 0.00 38.88 4.45
503 504 1.838077 ACGAAATAAGGACCTCAGGGG 59.162 52.381 0.00 0.00 41.89 4.79
514 515 2.806945 CCTCAGGGGTCATTTAGCAA 57.193 50.000 0.00 0.00 0.00 3.91
515 516 3.085952 CCTCAGGGGTCATTTAGCAAA 57.914 47.619 0.00 0.00 0.00 3.68
516 517 3.430453 CCTCAGGGGTCATTTAGCAAAA 58.570 45.455 0.00 0.00 0.00 2.44
517 518 3.831911 CCTCAGGGGTCATTTAGCAAAAA 59.168 43.478 0.00 0.00 0.00 1.94
518 519 4.467438 CCTCAGGGGTCATTTAGCAAAAAT 59.533 41.667 0.00 0.00 0.00 1.82
519 520 5.656416 CCTCAGGGGTCATTTAGCAAAAATA 59.344 40.000 0.00 0.00 0.00 1.40
520 521 6.154363 CCTCAGGGGTCATTTAGCAAAAATAA 59.846 38.462 0.00 0.00 0.00 1.40
521 522 7.147672 CCTCAGGGGTCATTTAGCAAAAATAAT 60.148 37.037 0.00 0.00 0.00 1.28
522 523 8.830915 TCAGGGGTCATTTAGCAAAAATAATA 57.169 30.769 0.00 0.00 0.00 0.98
523 524 8.691797 TCAGGGGTCATTTAGCAAAAATAATAC 58.308 33.333 0.00 0.00 0.00 1.89
524 525 8.695456 CAGGGGTCATTTAGCAAAAATAATACT 58.305 33.333 0.00 0.00 0.00 2.12
525 526 8.695456 AGGGGTCATTTAGCAAAAATAATACTG 58.305 33.333 0.00 0.00 0.00 2.74
526 527 7.438160 GGGGTCATTTAGCAAAAATAATACTGC 59.562 37.037 0.00 0.00 34.96 4.40
527 528 7.167468 GGGTCATTTAGCAAAAATAATACTGCG 59.833 37.037 0.00 0.00 39.80 5.18
528 529 7.305993 GGTCATTTAGCAAAAATAATACTGCGC 60.306 37.037 0.00 0.00 39.80 6.09
529 530 7.432252 GTCATTTAGCAAAAATAATACTGCGCT 59.568 33.333 9.73 0.00 39.80 5.92
530 531 7.973388 TCATTTAGCAAAAATAATACTGCGCTT 59.027 29.630 9.73 0.00 39.80 4.68
531 532 7.504922 TTTAGCAAAAATAATACTGCGCTTG 57.495 32.000 9.73 3.92 39.80 4.01
532 533 5.309323 AGCAAAAATAATACTGCGCTTGA 57.691 34.783 9.73 0.00 39.80 3.02
533 534 5.708948 AGCAAAAATAATACTGCGCTTGAA 58.291 33.333 9.73 0.00 39.80 2.69
534 535 5.572896 AGCAAAAATAATACTGCGCTTGAAC 59.427 36.000 9.73 0.00 39.80 3.18
535 536 5.496969 GCAAAAATAATACTGCGCTTGAACG 60.497 40.000 9.73 0.00 0.00 3.95
536 537 4.939509 AAATAATACTGCGCTTGAACGT 57.060 36.364 9.73 0.00 34.88 3.99
537 538 6.411630 AAAATAATACTGCGCTTGAACGTA 57.588 33.333 9.73 0.98 34.88 3.57
538 539 6.598753 AAATAATACTGCGCTTGAACGTAT 57.401 33.333 9.73 3.36 34.88 3.06
539 540 6.598753 AATAATACTGCGCTTGAACGTATT 57.401 33.333 9.73 13.23 35.60 1.89
540 541 4.939509 AATACTGCGCTTGAACGTATTT 57.060 36.364 9.73 0.00 34.88 1.40
541 542 2.875080 ACTGCGCTTGAACGTATTTC 57.125 45.000 9.73 0.00 34.88 2.17
542 543 1.126113 ACTGCGCTTGAACGTATTTCG 59.874 47.619 9.73 0.00 46.00 3.46
554 555 2.955614 CGTATTTCGTGACTTCCCTGT 58.044 47.619 0.00 0.00 34.52 4.00
555 556 4.100707 CGTATTTCGTGACTTCCCTGTA 57.899 45.455 0.00 0.00 34.52 2.74
556 557 3.855950 CGTATTTCGTGACTTCCCTGTAC 59.144 47.826 0.00 0.00 34.52 2.90
557 558 2.427232 TTTCGTGACTTCCCTGTACG 57.573 50.000 0.00 0.00 36.20 3.67
558 559 0.038892 TTCGTGACTTCCCTGTACGC 60.039 55.000 0.00 0.00 34.98 4.42
559 560 1.800315 CGTGACTTCCCTGTACGCG 60.800 63.158 3.53 3.53 0.00 6.01
560 561 2.092882 GTGACTTCCCTGTACGCGC 61.093 63.158 5.73 0.00 0.00 6.86
561 562 2.879462 GACTTCCCTGTACGCGCG 60.879 66.667 30.96 30.96 0.00 6.86
562 563 3.332493 GACTTCCCTGTACGCGCGA 62.332 63.158 39.36 17.83 0.00 5.87
563 564 2.126228 CTTCCCTGTACGCGCGAA 60.126 61.111 39.36 20.09 0.00 4.70
564 565 2.431260 TTCCCTGTACGCGCGAAC 60.431 61.111 39.36 14.33 0.00 3.95
565 566 3.919973 TTCCCTGTACGCGCGAACC 62.920 63.158 39.36 22.68 0.00 3.62
568 569 4.728102 CTGTACGCGCGAACCCCA 62.728 66.667 39.36 21.66 0.00 4.96
569 570 4.728102 TGTACGCGCGAACCCCAG 62.728 66.667 39.36 4.66 0.00 4.45
587 588 4.441695 CAGCCGCGAGCCAGAAGA 62.442 66.667 8.23 0.00 45.47 2.87
588 589 4.443266 AGCCGCGAGCCAGAAGAC 62.443 66.667 8.23 0.00 45.47 3.01
592 593 3.760035 GCGAGCCAGAAGACGGGA 61.760 66.667 0.00 0.00 33.26 5.14
593 594 2.492090 CGAGCCAGAAGACGGGAG 59.508 66.667 0.00 0.00 33.26 4.30
594 595 2.185608 GAGCCAGAAGACGGGAGC 59.814 66.667 0.00 0.00 33.26 4.70
595 596 3.378399 GAGCCAGAAGACGGGAGCC 62.378 68.421 0.00 0.00 33.26 4.70
596 597 4.475135 GCCAGAAGACGGGAGCCC 62.475 72.222 0.00 0.00 33.26 5.19
597 598 3.787001 CCAGAAGACGGGAGCCCC 61.787 72.222 0.00 0.30 41.09 5.80
598 599 2.685380 CAGAAGACGGGAGCCCCT 60.685 66.667 8.43 0.00 42.67 4.79
599 600 2.364448 AGAAGACGGGAGCCCCTC 60.364 66.667 8.43 0.00 42.67 4.30
608 609 2.446802 GAGCCCCTCCGGATCCTT 60.447 66.667 3.57 0.00 41.58 3.36
615 616 1.264749 CCTCCGGATCCTTCACCACA 61.265 60.000 3.57 0.00 0.00 4.17
726 3447 4.810491 CAGAACCAAAACCAAACCTGATTG 59.190 41.667 0.00 0.00 0.00 2.67
819 3540 1.451504 CGATGCCTGCCCCTATTCA 59.548 57.895 0.00 0.00 0.00 2.57
924 8042 1.487482 CTCGTCAAAGACTCAACGCA 58.513 50.000 0.00 0.00 35.22 5.24
926 8044 0.111704 CGTCAAAGACTCAACGCACG 60.112 55.000 0.00 0.00 0.00 5.34
929 8047 3.223435 AAAGACTCAACGCACGCGC 62.223 57.895 12.02 0.00 44.19 6.86
930 8048 4.942481 AGACTCAACGCACGCGCA 62.942 61.111 12.02 0.00 44.19 6.09
931 8049 4.702826 GACTCAACGCACGCGCAC 62.703 66.667 12.02 0.00 44.19 5.34
963 8081 1.069765 CGCACACCACTCCAAGTCT 59.930 57.895 0.00 0.00 0.00 3.24
1144 8268 0.391263 GAACACCCTCATCGACACCC 60.391 60.000 0.00 0.00 0.00 4.61
1271 8395 4.069232 CCTCGGCTGCGACCTCAA 62.069 66.667 0.00 0.00 0.00 3.02
1367 8491 2.017668 ATCAACACCAACCCCAGCCA 62.018 55.000 0.00 0.00 0.00 4.75
1420 8544 3.542676 ACCACGACTTCCACGCCA 61.543 61.111 0.00 0.00 0.00 5.69
2688 9884 6.985653 TCGATGAGGAGAAAGGAATAGAAT 57.014 37.500 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.391130 TGTCAGGCCGTCTATTGTGC 60.391 55.000 0.00 0.00 0.00 4.57
1 2 1.359848 GTGTCAGGCCGTCTATTGTG 58.640 55.000 0.00 0.00 0.00 3.33
2 3 0.108804 CGTGTCAGGCCGTCTATTGT 60.109 55.000 0.00 0.00 0.00 2.71
4 5 1.153628 GCGTGTCAGGCCGTCTATT 60.154 57.895 6.23 0.00 0.00 1.73
6 7 3.755628 GGCGTGTCAGGCCGTCTA 61.756 66.667 20.10 0.00 39.53 2.59
12 13 2.639286 CAACTTGGCGTGTCAGGC 59.361 61.111 9.04 9.04 37.19 4.85
13 14 3.343972 CCAACTTGGCGTGTCAGG 58.656 61.111 0.00 0.00 0.00 3.86
22 23 2.203538 AGCCACCTGCCAACTTGG 60.204 61.111 3.10 3.10 42.71 3.61
23 24 1.108727 TTGAGCCACCTGCCAACTTG 61.109 55.000 0.00 0.00 42.71 3.16
24 25 0.825010 CTTGAGCCACCTGCCAACTT 60.825 55.000 0.00 0.00 42.71 2.66
25 26 1.228367 CTTGAGCCACCTGCCAACT 60.228 57.895 0.00 0.00 42.71 3.16
26 27 2.270986 CCTTGAGCCACCTGCCAAC 61.271 63.158 0.00 0.00 42.71 3.77
27 28 1.792757 ATCCTTGAGCCACCTGCCAA 61.793 55.000 0.00 0.00 42.71 4.52
28 29 2.202236 GATCCTTGAGCCACCTGCCA 62.202 60.000 0.00 0.00 42.71 4.92
29 30 1.452833 GATCCTTGAGCCACCTGCC 60.453 63.158 0.00 0.00 42.71 4.85
30 31 0.833287 TAGATCCTTGAGCCACCTGC 59.167 55.000 0.00 0.00 41.71 4.85
31 32 1.833630 TGTAGATCCTTGAGCCACCTG 59.166 52.381 0.00 0.00 0.00 4.00
32 33 2.254152 TGTAGATCCTTGAGCCACCT 57.746 50.000 0.00 0.00 0.00 4.00
33 34 2.420687 CCTTGTAGATCCTTGAGCCACC 60.421 54.545 0.00 0.00 0.00 4.61
34 35 2.911484 CCTTGTAGATCCTTGAGCCAC 58.089 52.381 0.00 0.00 0.00 5.01
35 36 1.210478 GCCTTGTAGATCCTTGAGCCA 59.790 52.381 0.00 0.00 0.00 4.75
36 37 1.475930 GGCCTTGTAGATCCTTGAGCC 60.476 57.143 0.00 0.00 0.00 4.70
37 38 1.210478 TGGCCTTGTAGATCCTTGAGC 59.790 52.381 3.32 0.00 0.00 4.26
38 39 3.634397 TTGGCCTTGTAGATCCTTGAG 57.366 47.619 3.32 0.00 0.00 3.02
39 40 4.591321 ATTTGGCCTTGTAGATCCTTGA 57.409 40.909 3.32 0.00 0.00 3.02
40 41 5.413499 CAAATTTGGCCTTGTAGATCCTTG 58.587 41.667 10.49 0.00 0.00 3.61
41 42 4.081476 GCAAATTTGGCCTTGTAGATCCTT 60.081 41.667 19.47 0.00 0.00 3.36
42 43 3.448660 GCAAATTTGGCCTTGTAGATCCT 59.551 43.478 19.47 0.00 0.00 3.24
43 44 3.195396 TGCAAATTTGGCCTTGTAGATCC 59.805 43.478 19.47 0.00 0.00 3.36
44 45 4.427312 CTGCAAATTTGGCCTTGTAGATC 58.573 43.478 19.47 0.00 37.42 2.75
45 46 3.196254 CCTGCAAATTTGGCCTTGTAGAT 59.804 43.478 19.47 0.00 37.42 1.98
46 47 2.562298 CCTGCAAATTTGGCCTTGTAGA 59.438 45.455 19.47 0.00 37.42 2.59
47 48 2.299867 ACCTGCAAATTTGGCCTTGTAG 59.700 45.455 19.47 8.94 35.69 2.74
48 49 2.036992 CACCTGCAAATTTGGCCTTGTA 59.963 45.455 19.47 0.00 0.00 2.41
49 50 1.130777 ACCTGCAAATTTGGCCTTGT 58.869 45.000 19.47 6.62 0.00 3.16
50 51 1.515081 CACCTGCAAATTTGGCCTTG 58.485 50.000 19.47 0.26 0.00 3.61
51 52 0.397564 CCACCTGCAAATTTGGCCTT 59.602 50.000 19.47 0.00 0.00 4.35
52 53 2.060370 CCACCTGCAAATTTGGCCT 58.940 52.632 19.47 0.00 0.00 5.19
53 54 4.699626 CCACCTGCAAATTTGGCC 57.300 55.556 19.47 0.00 0.00 5.36
72 73 2.505006 TGTTTGTACACCGGCCGT 59.495 55.556 26.12 8.42 0.00 5.68
80 81 4.321304 CCTTGTGTTTGGTGTGTTTGTACA 60.321 41.667 0.00 0.00 0.00 2.90
81 82 4.170256 CCTTGTGTTTGGTGTGTTTGTAC 58.830 43.478 0.00 0.00 0.00 2.90
82 83 3.193691 CCCTTGTGTTTGGTGTGTTTGTA 59.806 43.478 0.00 0.00 0.00 2.41
83 84 2.028567 CCCTTGTGTTTGGTGTGTTTGT 60.029 45.455 0.00 0.00 0.00 2.83
84 85 2.615869 CCCTTGTGTTTGGTGTGTTTG 58.384 47.619 0.00 0.00 0.00 2.93
85 86 1.066502 GCCCTTGTGTTTGGTGTGTTT 60.067 47.619 0.00 0.00 0.00 2.83
86 87 0.534873 GCCCTTGTGTTTGGTGTGTT 59.465 50.000 0.00 0.00 0.00 3.32
87 88 1.662438 CGCCCTTGTGTTTGGTGTGT 61.662 55.000 0.00 0.00 0.00 3.72
88 89 1.065600 CGCCCTTGTGTTTGGTGTG 59.934 57.895 0.00 0.00 0.00 3.82
89 90 0.107116 TACGCCCTTGTGTTTGGTGT 60.107 50.000 0.00 0.00 44.58 4.16
90 91 0.309612 GTACGCCCTTGTGTTTGGTG 59.690 55.000 0.00 0.00 36.42 4.17
91 92 0.181824 AGTACGCCCTTGTGTTTGGT 59.818 50.000 0.00 0.00 36.42 3.67
92 93 1.314730 AAGTACGCCCTTGTGTTTGG 58.685 50.000 0.00 0.00 36.42 3.28
93 94 6.431198 AATATAAGTACGCCCTTGTGTTTG 57.569 37.500 0.00 0.00 36.42 2.93
94 95 6.882678 AGAAATATAAGTACGCCCTTGTGTTT 59.117 34.615 6.07 6.07 36.42 2.83
95 96 6.412214 AGAAATATAAGTACGCCCTTGTGTT 58.588 36.000 0.00 0.00 36.42 3.32
96 97 5.985911 AGAAATATAAGTACGCCCTTGTGT 58.014 37.500 0.00 0.00 39.01 3.72
97 98 8.428186 TTTAGAAATATAAGTACGCCCTTGTG 57.572 34.615 0.00 0.00 0.00 3.33
98 99 8.886719 GTTTTAGAAATATAAGTACGCCCTTGT 58.113 33.333 0.00 0.00 0.00 3.16
99 100 8.060090 CGTTTTAGAAATATAAGTACGCCCTTG 58.940 37.037 0.00 0.00 0.00 3.61
100 101 7.254556 GCGTTTTAGAAATATAAGTACGCCCTT 60.255 37.037 13.66 0.00 40.62 3.95
101 102 6.201615 GCGTTTTAGAAATATAAGTACGCCCT 59.798 38.462 13.66 0.00 40.62 5.19
102 103 6.357980 GCGTTTTAGAAATATAAGTACGCCC 58.642 40.000 13.66 0.00 40.62 6.13
104 105 6.060773 CGGCGTTTTAGAAATATAAGTACGC 58.939 40.000 15.16 15.16 42.91 4.42
105 106 7.153478 ACGGCGTTTTAGAAATATAAGTACG 57.847 36.000 6.77 0.00 32.38 3.67
106 107 8.480066 GGTACGGCGTTTTAGAAATATAAGTAC 58.520 37.037 21.24 3.17 0.00 2.73
107 108 8.194104 TGGTACGGCGTTTTAGAAATATAAGTA 58.806 33.333 21.24 0.00 0.00 2.24
108 109 7.041107 TGGTACGGCGTTTTAGAAATATAAGT 58.959 34.615 21.24 0.00 0.00 2.24
109 110 7.467557 TGGTACGGCGTTTTAGAAATATAAG 57.532 36.000 21.24 0.00 0.00 1.73
110 111 9.539825 TTATGGTACGGCGTTTTAGAAATATAA 57.460 29.630 21.24 7.96 0.00 0.98
111 112 9.195411 CTTATGGTACGGCGTTTTAGAAATATA 57.805 33.333 21.24 2.24 0.00 0.86
112 113 7.172019 CCTTATGGTACGGCGTTTTAGAAATAT 59.828 37.037 21.24 3.19 0.00 1.28
113 114 6.479660 CCTTATGGTACGGCGTTTTAGAAATA 59.520 38.462 21.24 4.62 0.00 1.40
114 115 5.295045 CCTTATGGTACGGCGTTTTAGAAAT 59.705 40.000 21.24 5.61 0.00 2.17
115 116 4.630940 CCTTATGGTACGGCGTTTTAGAAA 59.369 41.667 21.24 5.56 0.00 2.52
116 117 4.183101 CCTTATGGTACGGCGTTTTAGAA 58.817 43.478 21.24 7.40 0.00 2.10
117 118 3.784338 CCTTATGGTACGGCGTTTTAGA 58.216 45.455 21.24 0.00 0.00 2.10
118 119 2.286025 GCCTTATGGTACGGCGTTTTAG 59.714 50.000 21.24 7.52 33.64 1.85
119 120 2.278854 GCCTTATGGTACGGCGTTTTA 58.721 47.619 21.24 4.89 33.64 1.52
120 121 1.089112 GCCTTATGGTACGGCGTTTT 58.911 50.000 21.24 3.23 33.64 2.43
121 122 2.771435 GCCTTATGGTACGGCGTTT 58.229 52.632 21.24 3.62 33.64 3.60
122 123 4.526770 GCCTTATGGTACGGCGTT 57.473 55.556 21.24 1.50 33.64 4.84
125 126 1.145803 GATTCGCCTTATGGTACGGC 58.854 55.000 0.00 0.00 40.40 5.68
126 127 2.519377 TGATTCGCCTTATGGTACGG 57.481 50.000 0.00 0.00 35.27 4.02
127 128 3.914312 AGATGATTCGCCTTATGGTACG 58.086 45.455 0.00 0.00 35.27 3.67
128 129 5.758296 TCAAAGATGATTCGCCTTATGGTAC 59.242 40.000 0.00 0.00 35.27 3.34
129 130 5.924356 TCAAAGATGATTCGCCTTATGGTA 58.076 37.500 0.00 0.00 35.27 3.25
130 131 4.780815 TCAAAGATGATTCGCCTTATGGT 58.219 39.130 0.00 0.00 35.27 3.55
131 132 5.756195 TTCAAAGATGATTCGCCTTATGG 57.244 39.130 0.00 0.00 34.96 2.74
132 133 6.470235 GTGTTTCAAAGATGATTCGCCTTATG 59.530 38.462 0.00 0.00 34.96 1.90
133 134 6.555315 GTGTTTCAAAGATGATTCGCCTTAT 58.445 36.000 0.00 0.00 34.96 1.73
134 135 5.390461 CGTGTTTCAAAGATGATTCGCCTTA 60.390 40.000 0.00 0.00 34.96 2.69
135 136 4.613622 CGTGTTTCAAAGATGATTCGCCTT 60.614 41.667 0.00 0.00 34.96 4.35
136 137 3.120199 CGTGTTTCAAAGATGATTCGCCT 60.120 43.478 0.00 0.00 34.96 5.52
137 138 3.163594 CGTGTTTCAAAGATGATTCGCC 58.836 45.455 0.00 0.00 34.96 5.54
138 139 2.589841 GCGTGTTTCAAAGATGATTCGC 59.410 45.455 0.00 0.00 34.96 4.70
139 140 3.163594 GGCGTGTTTCAAAGATGATTCG 58.836 45.455 0.00 0.00 34.96 3.34
140 141 4.159377 TGGCGTGTTTCAAAGATGATTC 57.841 40.909 0.00 0.00 34.96 2.52
141 142 4.582701 TTGGCGTGTTTCAAAGATGATT 57.417 36.364 0.00 0.00 34.96 2.57
142 143 4.582701 TTTGGCGTGTTTCAAAGATGAT 57.417 36.364 0.00 0.00 34.96 2.45
143 144 4.582701 ATTTGGCGTGTTTCAAAGATGA 57.417 36.364 0.00 0.00 36.49 2.92
144 145 6.580476 GTTAATTTGGCGTGTTTCAAAGATG 58.420 36.000 0.00 0.00 36.49 2.90
145 146 5.401079 CGTTAATTTGGCGTGTTTCAAAGAT 59.599 36.000 0.00 0.00 36.49 2.40
146 147 4.735822 CGTTAATTTGGCGTGTTTCAAAGA 59.264 37.500 0.00 0.00 36.49 2.52
147 148 4.085312 CCGTTAATTTGGCGTGTTTCAAAG 60.085 41.667 0.00 0.00 36.49 2.77
148 149 3.797256 CCGTTAATTTGGCGTGTTTCAAA 59.203 39.130 0.00 0.00 37.29 2.69
149 150 3.066342 TCCGTTAATTTGGCGTGTTTCAA 59.934 39.130 0.00 0.00 0.00 2.69
150 151 2.617308 TCCGTTAATTTGGCGTGTTTCA 59.383 40.909 0.00 0.00 0.00 2.69
151 152 3.270962 TCCGTTAATTTGGCGTGTTTC 57.729 42.857 0.00 0.00 0.00 2.78
152 153 3.004944 ACATCCGTTAATTTGGCGTGTTT 59.995 39.130 0.00 0.00 0.00 2.83
153 154 2.554893 ACATCCGTTAATTTGGCGTGTT 59.445 40.909 0.00 0.00 0.00 3.32
154 155 2.095466 CACATCCGTTAATTTGGCGTGT 60.095 45.455 0.00 0.00 0.00 4.49
155 156 2.095466 ACACATCCGTTAATTTGGCGTG 60.095 45.455 0.00 0.00 35.64 5.34
156 157 2.156098 ACACATCCGTTAATTTGGCGT 58.844 42.857 0.00 0.00 0.00 5.68
157 158 2.911819 ACACATCCGTTAATTTGGCG 57.088 45.000 0.00 0.00 0.00 5.69
158 159 4.303282 ACAAACACATCCGTTAATTTGGC 58.697 39.130 0.00 0.00 32.58 4.52
159 160 7.810282 TGAATACAAACACATCCGTTAATTTGG 59.190 33.333 0.00 0.00 32.58 3.28
160 161 8.735303 TGAATACAAACACATCCGTTAATTTG 57.265 30.769 0.00 0.00 34.10 2.32
161 162 9.352784 CATGAATACAAACACATCCGTTAATTT 57.647 29.630 0.00 0.00 0.00 1.82
162 163 8.519526 ACATGAATACAAACACATCCGTTAATT 58.480 29.630 0.00 0.00 0.00 1.40
163 164 8.050778 ACATGAATACAAACACATCCGTTAAT 57.949 30.769 0.00 0.00 0.00 1.40
164 165 7.441890 ACATGAATACAAACACATCCGTTAA 57.558 32.000 0.00 0.00 0.00 2.01
165 166 7.441890 AACATGAATACAAACACATCCGTTA 57.558 32.000 0.00 0.00 0.00 3.18
166 167 5.957842 ACATGAATACAAACACATCCGTT 57.042 34.783 0.00 0.00 0.00 4.44
167 168 5.957842 AACATGAATACAAACACATCCGT 57.042 34.783 0.00 0.00 0.00 4.69
168 169 6.860539 TCAAAACATGAATACAAACACATCCG 59.139 34.615 0.00 0.00 34.30 4.18
169 170 7.148983 CGTCAAAACATGAATACAAACACATCC 60.149 37.037 0.00 0.00 40.50 3.51
170 171 7.617122 GCGTCAAAACATGAATACAAACACATC 60.617 37.037 0.00 0.00 40.50 3.06
171 172 6.143758 GCGTCAAAACATGAATACAAACACAT 59.856 34.615 0.00 0.00 40.50 3.21
172 173 5.457148 GCGTCAAAACATGAATACAAACACA 59.543 36.000 0.00 0.00 40.50 3.72
173 174 5.108027 GGCGTCAAAACATGAATACAAACAC 60.108 40.000 0.00 0.00 40.50 3.32
174 175 4.979197 GGCGTCAAAACATGAATACAAACA 59.021 37.500 0.00 0.00 40.50 2.83
175 176 5.116983 CAGGCGTCAAAACATGAATACAAAC 59.883 40.000 0.00 0.00 40.50 2.93
176 177 5.218885 CAGGCGTCAAAACATGAATACAAA 58.781 37.500 0.00 0.00 40.50 2.83
177 178 4.277174 ACAGGCGTCAAAACATGAATACAA 59.723 37.500 0.00 0.00 40.50 2.41
178 179 3.818210 ACAGGCGTCAAAACATGAATACA 59.182 39.130 0.00 0.00 40.50 2.29
179 180 4.403453 GACAGGCGTCAAAACATGAATAC 58.597 43.478 0.00 0.00 42.13 1.89
180 181 4.678509 GACAGGCGTCAAAACATGAATA 57.321 40.909 0.00 0.00 42.13 1.75
181 182 3.559238 GACAGGCGTCAAAACATGAAT 57.441 42.857 0.00 0.00 42.13 2.57
196 197 4.250464 TCATAAAACGCCTAAGTGACAGG 58.750 43.478 0.00 0.00 36.16 4.00
197 198 4.929808 ACTCATAAAACGCCTAAGTGACAG 59.070 41.667 0.00 0.00 0.00 3.51
198 199 4.890088 ACTCATAAAACGCCTAAGTGACA 58.110 39.130 0.00 0.00 0.00 3.58
199 200 5.865552 TGTACTCATAAAACGCCTAAGTGAC 59.134 40.000 0.00 0.00 0.00 3.67
200 201 6.028146 TGTACTCATAAAACGCCTAAGTGA 57.972 37.500 0.00 0.00 0.00 3.41
201 202 6.533723 TGATGTACTCATAAAACGCCTAAGTG 59.466 38.462 0.00 0.00 34.06 3.16
202 203 6.636705 TGATGTACTCATAAAACGCCTAAGT 58.363 36.000 0.00 0.00 34.06 2.24
203 204 7.534085 TTGATGTACTCATAAAACGCCTAAG 57.466 36.000 0.00 0.00 34.06 2.18
204 205 7.908827 TTTGATGTACTCATAAAACGCCTAA 57.091 32.000 0.00 0.00 31.54 2.69
205 206 7.388224 TGTTTTGATGTACTCATAAAACGCCTA 59.612 33.333 16.08 4.44 38.48 3.93
206 207 6.205853 TGTTTTGATGTACTCATAAAACGCCT 59.794 34.615 16.08 0.00 38.48 5.52
207 208 6.375377 TGTTTTGATGTACTCATAAAACGCC 58.625 36.000 16.08 3.06 38.48 5.68
208 209 7.962918 AGATGTTTTGATGTACTCATAAAACGC 59.037 33.333 16.08 12.82 38.48 4.84
215 216 9.823647 CCTAGTTAGATGTTTTGATGTACTCAT 57.176 33.333 0.00 0.00 36.95 2.90
216 217 8.812972 ACCTAGTTAGATGTTTTGATGTACTCA 58.187 33.333 0.00 0.00 0.00 3.41
217 218 9.303537 GACCTAGTTAGATGTTTTGATGTACTC 57.696 37.037 0.00 0.00 0.00 2.59
218 219 8.812972 TGACCTAGTTAGATGTTTTGATGTACT 58.187 33.333 0.00 0.00 0.00 2.73
219 220 8.997621 TGACCTAGTTAGATGTTTTGATGTAC 57.002 34.615 0.00 0.00 0.00 2.90
220 221 8.812972 ACTGACCTAGTTAGATGTTTTGATGTA 58.187 33.333 0.00 0.00 35.67 2.29
221 222 7.604164 CACTGACCTAGTTAGATGTTTTGATGT 59.396 37.037 0.00 0.00 37.60 3.06
222 223 7.065085 CCACTGACCTAGTTAGATGTTTTGATG 59.935 40.741 0.00 0.00 37.60 3.07
223 224 7.038302 TCCACTGACCTAGTTAGATGTTTTGAT 60.038 37.037 0.00 0.00 37.60 2.57
224 225 6.269077 TCCACTGACCTAGTTAGATGTTTTGA 59.731 38.462 0.00 0.00 37.60 2.69
225 226 6.464222 TCCACTGACCTAGTTAGATGTTTTG 58.536 40.000 0.00 0.00 37.60 2.44
226 227 6.681729 TCCACTGACCTAGTTAGATGTTTT 57.318 37.500 0.00 0.00 37.60 2.43
227 228 6.644347 CATCCACTGACCTAGTTAGATGTTT 58.356 40.000 0.00 0.00 40.01 2.83
228 229 6.227298 CATCCACTGACCTAGTTAGATGTT 57.773 41.667 0.00 0.00 40.01 2.71
229 230 5.273208 ACATCCACTGACCTAGTTAGATGT 58.727 41.667 12.95 12.95 46.26 3.06
230 231 5.860941 ACATCCACTGACCTAGTTAGATG 57.139 43.478 12.06 12.06 45.08 2.90
231 232 6.674573 AGTACATCCACTGACCTAGTTAGAT 58.325 40.000 0.00 0.00 37.60 1.98
232 233 6.075949 AGTACATCCACTGACCTAGTTAGA 57.924 41.667 0.00 0.00 37.60 2.10
243 244 2.584492 TCGCATCAGTACATCCACTG 57.416 50.000 0.00 0.00 46.04 3.66
244 245 2.760650 TCTTCGCATCAGTACATCCACT 59.239 45.455 0.00 0.00 0.00 4.00
245 246 3.165058 TCTTCGCATCAGTACATCCAC 57.835 47.619 0.00 0.00 0.00 4.02
246 247 3.721035 CATCTTCGCATCAGTACATCCA 58.279 45.455 0.00 0.00 0.00 3.41
247 248 2.478134 GCATCTTCGCATCAGTACATCC 59.522 50.000 0.00 0.00 0.00 3.51
248 249 3.388308 AGCATCTTCGCATCAGTACATC 58.612 45.455 0.00 0.00 0.00 3.06
249 250 3.388308 GAGCATCTTCGCATCAGTACAT 58.612 45.455 0.00 0.00 0.00 2.29
250 251 2.796032 CGAGCATCTTCGCATCAGTACA 60.796 50.000 0.00 0.00 33.39 2.90
251 252 1.783711 CGAGCATCTTCGCATCAGTAC 59.216 52.381 0.00 0.00 33.39 2.73
252 253 1.676006 TCGAGCATCTTCGCATCAGTA 59.324 47.619 0.00 0.00 40.29 2.74
253 254 0.457443 TCGAGCATCTTCGCATCAGT 59.543 50.000 0.00 0.00 40.29 3.41
254 255 0.851495 GTCGAGCATCTTCGCATCAG 59.149 55.000 0.00 0.00 40.29 2.90
255 256 0.173255 TGTCGAGCATCTTCGCATCA 59.827 50.000 0.00 0.00 40.29 3.07
256 257 1.495878 ATGTCGAGCATCTTCGCATC 58.504 50.000 0.00 0.00 40.29 3.91
257 258 1.596260 CAATGTCGAGCATCTTCGCAT 59.404 47.619 0.00 0.00 40.29 4.73
258 259 1.001624 CAATGTCGAGCATCTTCGCA 58.998 50.000 0.00 0.00 40.29 5.10
259 260 1.280982 TCAATGTCGAGCATCTTCGC 58.719 50.000 0.00 0.00 40.29 4.70
260 261 3.614176 TCTTTCAATGTCGAGCATCTTCG 59.386 43.478 0.00 0.00 41.79 3.79
261 262 5.319931 GTTCTTTCAATGTCGAGCATCTTC 58.680 41.667 0.00 0.00 36.67 2.87
262 263 4.143030 CGTTCTTTCAATGTCGAGCATCTT 60.143 41.667 0.00 0.00 36.67 2.40
263 264 3.369147 CGTTCTTTCAATGTCGAGCATCT 59.631 43.478 0.00 0.00 36.67 2.90
264 265 3.663908 CGTTCTTTCAATGTCGAGCATC 58.336 45.455 0.00 0.00 36.67 3.91
265 266 2.159653 GCGTTCTTTCAATGTCGAGCAT 60.160 45.455 0.00 0.00 40.03 3.79
266 267 1.194547 GCGTTCTTTCAATGTCGAGCA 59.805 47.619 0.00 0.00 0.00 4.26
267 268 1.464189 GGCGTTCTTTCAATGTCGAGC 60.464 52.381 0.00 0.00 0.00 5.03
268 269 1.798223 TGGCGTTCTTTCAATGTCGAG 59.202 47.619 0.00 0.00 0.00 4.04
269 270 1.798223 CTGGCGTTCTTTCAATGTCGA 59.202 47.619 0.00 0.00 0.00 4.20
270 271 1.798223 TCTGGCGTTCTTTCAATGTCG 59.202 47.619 0.00 0.00 0.00 4.35
271 272 5.741388 ATATCTGGCGTTCTTTCAATGTC 57.259 39.130 0.00 0.00 0.00 3.06
272 273 5.882557 AGAATATCTGGCGTTCTTTCAATGT 59.117 36.000 0.00 0.00 0.00 2.71
273 274 6.369059 AGAATATCTGGCGTTCTTTCAATG 57.631 37.500 0.00 0.00 0.00 2.82
274 275 6.483640 GGTAGAATATCTGGCGTTCTTTCAAT 59.516 38.462 0.00 0.00 34.33 2.57
275 276 5.815740 GGTAGAATATCTGGCGTTCTTTCAA 59.184 40.000 0.00 0.00 34.33 2.69
276 277 5.105106 TGGTAGAATATCTGGCGTTCTTTCA 60.105 40.000 0.00 0.00 34.33 2.69
277 278 5.357257 TGGTAGAATATCTGGCGTTCTTTC 58.643 41.667 0.00 0.00 34.33 2.62
278 279 5.104900 ACTGGTAGAATATCTGGCGTTCTTT 60.105 40.000 0.00 0.00 34.33 2.52
279 280 4.406003 ACTGGTAGAATATCTGGCGTTCTT 59.594 41.667 0.00 0.00 34.33 2.52
280 281 3.961408 ACTGGTAGAATATCTGGCGTTCT 59.039 43.478 0.00 0.00 36.30 3.01
281 282 4.323553 ACTGGTAGAATATCTGGCGTTC 57.676 45.455 0.00 0.00 0.00 3.95
282 283 4.894114 ACTACTGGTAGAATATCTGGCGTT 59.106 41.667 13.83 0.00 36.97 4.84
283 284 4.471548 ACTACTGGTAGAATATCTGGCGT 58.528 43.478 13.83 0.00 36.97 5.68
284 285 4.378563 CGACTACTGGTAGAATATCTGGCG 60.379 50.000 13.83 0.00 36.97 5.69
285 286 4.616373 GCGACTACTGGTAGAATATCTGGC 60.616 50.000 13.83 1.12 36.97 4.85
286 287 4.378563 CGCGACTACTGGTAGAATATCTGG 60.379 50.000 13.83 0.00 36.97 3.86
287 288 4.713806 CGCGACTACTGGTAGAATATCTG 58.286 47.826 13.83 1.25 36.97 2.90
288 289 3.188873 GCGCGACTACTGGTAGAATATCT 59.811 47.826 12.10 0.00 36.97 1.98
289 290 3.490399 GCGCGACTACTGGTAGAATATC 58.510 50.000 12.10 1.46 36.97 1.63
290 291 2.228343 GGCGCGACTACTGGTAGAATAT 59.772 50.000 12.10 0.00 36.97 1.28
291 292 1.605710 GGCGCGACTACTGGTAGAATA 59.394 52.381 12.10 0.00 36.97 1.75
292 293 0.384669 GGCGCGACTACTGGTAGAAT 59.615 55.000 12.10 0.00 36.97 2.40
293 294 0.679002 AGGCGCGACTACTGGTAGAA 60.679 55.000 16.12 0.00 36.97 2.10
294 295 0.679002 AAGGCGCGACTACTGGTAGA 60.679 55.000 18.71 0.00 36.97 2.59
295 296 0.172803 AAAGGCGCGACTACTGGTAG 59.827 55.000 18.71 6.26 39.04 3.18
296 297 0.108992 CAAAGGCGCGACTACTGGTA 60.109 55.000 18.71 0.00 0.00 3.25
297 298 1.374252 CAAAGGCGCGACTACTGGT 60.374 57.895 18.71 0.00 0.00 4.00
298 299 0.669318 TTCAAAGGCGCGACTACTGG 60.669 55.000 18.71 5.14 0.00 4.00
299 300 1.324736 GATTCAAAGGCGCGACTACTG 59.675 52.381 18.71 17.03 0.00 2.74
300 301 1.204941 AGATTCAAAGGCGCGACTACT 59.795 47.619 18.71 1.52 0.00 2.57
301 302 1.324736 CAGATTCAAAGGCGCGACTAC 59.675 52.381 18.71 2.75 0.00 2.73
302 303 1.203758 TCAGATTCAAAGGCGCGACTA 59.796 47.619 18.71 0.00 0.00 2.59
303 304 0.037326 TCAGATTCAAAGGCGCGACT 60.037 50.000 9.84 9.84 0.00 4.18
304 305 0.095417 GTCAGATTCAAAGGCGCGAC 59.905 55.000 12.10 7.34 0.00 5.19
305 306 1.351430 CGTCAGATTCAAAGGCGCGA 61.351 55.000 12.10 0.00 0.00 5.87
306 307 1.059369 CGTCAGATTCAAAGGCGCG 59.941 57.895 0.00 0.00 0.00 6.86
307 308 1.226128 GCGTCAGATTCAAAGGCGC 60.226 57.895 0.00 0.00 36.75 6.53
308 309 1.059369 CGCGTCAGATTCAAAGGCG 59.941 57.895 0.00 9.78 40.26 5.52
309 310 0.095417 GACGCGTCAGATTCAAAGGC 59.905 55.000 33.09 1.78 0.00 4.35
310 311 1.428448 TGACGCGTCAGATTCAAAGG 58.572 50.000 36.40 0.00 34.14 3.11
311 312 2.413112 ACATGACGCGTCAGATTCAAAG 59.587 45.455 40.50 24.76 43.61 2.77
312 313 2.411748 GACATGACGCGTCAGATTCAAA 59.588 45.455 40.50 19.83 43.61 2.69
313 314 1.992667 GACATGACGCGTCAGATTCAA 59.007 47.619 40.50 20.57 43.61 2.69
314 315 1.629013 GACATGACGCGTCAGATTCA 58.371 50.000 40.50 21.89 43.61 2.57
315 316 0.567968 CGACATGACGCGTCAGATTC 59.432 55.000 40.50 32.33 43.61 2.52
316 317 0.802222 CCGACATGACGCGTCAGATT 60.802 55.000 40.50 28.69 43.61 2.40
317 318 1.226688 CCGACATGACGCGTCAGAT 60.227 57.895 40.50 31.94 43.61 2.90
318 319 2.178273 CCGACATGACGCGTCAGA 59.822 61.111 40.50 23.52 43.61 3.27
319 320 3.545481 GCCGACATGACGCGTCAG 61.545 66.667 40.50 32.63 43.61 3.51
351 352 3.492421 TGGTTCATAGTCGTCGGTAAC 57.508 47.619 0.00 0.00 0.00 2.50
352 353 3.695556 TCATGGTTCATAGTCGTCGGTAA 59.304 43.478 0.00 0.00 0.00 2.85
353 354 3.065786 GTCATGGTTCATAGTCGTCGGTA 59.934 47.826 0.00 0.00 0.00 4.02
354 355 2.097036 TCATGGTTCATAGTCGTCGGT 58.903 47.619 0.00 0.00 0.00 4.69
355 356 2.460918 GTCATGGTTCATAGTCGTCGG 58.539 52.381 0.00 0.00 0.00 4.79
356 357 2.460918 GGTCATGGTTCATAGTCGTCG 58.539 52.381 0.00 0.00 0.00 5.12
357 358 2.460918 CGGTCATGGTTCATAGTCGTC 58.539 52.381 0.00 0.00 0.00 4.20
358 359 1.136305 CCGGTCATGGTTCATAGTCGT 59.864 52.381 0.00 0.00 0.00 4.34
359 360 1.136305 ACCGGTCATGGTTCATAGTCG 59.864 52.381 0.00 0.00 39.99 4.18
360 361 2.167693 TGACCGGTCATGGTTCATAGTC 59.832 50.000 33.23 2.93 44.01 2.59
361 362 2.184533 TGACCGGTCATGGTTCATAGT 58.815 47.619 33.23 0.00 44.01 2.12
362 363 2.979814 TGACCGGTCATGGTTCATAG 57.020 50.000 33.23 0.00 44.01 2.23
363 364 3.704800 TTTGACCGGTCATGGTTCATA 57.295 42.857 36.52 17.43 44.01 2.15
364 365 2.577606 TTTGACCGGTCATGGTTCAT 57.422 45.000 36.52 0.00 44.01 2.57
365 366 2.350057 TTTTGACCGGTCATGGTTCA 57.650 45.000 36.52 18.99 44.01 3.18
366 367 2.817258 TGATTTTGACCGGTCATGGTTC 59.183 45.455 36.52 27.31 44.01 3.62
367 368 2.870175 TGATTTTGACCGGTCATGGTT 58.130 42.857 36.52 21.49 44.01 3.67
369 370 3.282021 AGATGATTTTGACCGGTCATGG 58.718 45.455 36.52 0.00 39.64 3.66
370 371 4.970662 AAGATGATTTTGACCGGTCATG 57.029 40.909 36.52 0.00 39.64 3.07
371 372 4.380867 GCAAAGATGATTTTGACCGGTCAT 60.381 41.667 36.52 23.18 39.79 3.06
372 373 3.057596 GCAAAGATGATTTTGACCGGTCA 60.058 43.478 33.23 33.23 39.79 4.02
373 374 3.501950 GCAAAGATGATTTTGACCGGTC 58.498 45.455 28.17 28.17 39.79 4.79
374 375 2.095263 CGCAAAGATGATTTTGACCGGT 60.095 45.455 6.92 6.92 39.79 5.28
375 376 2.518949 CGCAAAGATGATTTTGACCGG 58.481 47.619 0.00 0.00 39.79 5.28
376 377 2.161410 TCCGCAAAGATGATTTTGACCG 59.839 45.455 2.90 0.00 39.79 4.79
377 378 3.057596 TGTCCGCAAAGATGATTTTGACC 60.058 43.478 2.90 0.00 39.79 4.02
378 379 4.159377 TGTCCGCAAAGATGATTTTGAC 57.841 40.909 2.90 0.00 39.79 3.18
379 380 3.366273 GCTGTCCGCAAAGATGATTTTGA 60.366 43.478 2.90 0.00 39.79 2.69
380 381 2.919229 GCTGTCCGCAAAGATGATTTTG 59.081 45.455 0.00 0.00 40.25 2.44
381 382 3.221964 GCTGTCCGCAAAGATGATTTT 57.778 42.857 0.00 0.00 38.92 1.82
382 383 2.927553 GCTGTCCGCAAAGATGATTT 57.072 45.000 0.00 0.00 38.92 2.17
394 395 2.512286 ATGTCGCCATGCTGTCCG 60.512 61.111 0.00 0.00 0.00 4.79
395 396 3.104766 CATGTCGCCATGCTGTCC 58.895 61.111 0.00 0.00 41.88 4.02
402 403 1.200716 CTTTCACTTGCATGTCGCCAT 59.799 47.619 1.56 0.00 41.33 4.40
403 404 0.592637 CTTTCACTTGCATGTCGCCA 59.407 50.000 1.56 0.00 41.33 5.69
404 405 0.730494 GCTTTCACTTGCATGTCGCC 60.730 55.000 1.56 0.00 41.33 5.54
405 406 1.061799 CGCTTTCACTTGCATGTCGC 61.062 55.000 1.56 3.08 42.89 5.19
406 407 0.235665 ACGCTTTCACTTGCATGTCG 59.764 50.000 1.56 5.82 0.00 4.35
407 408 1.532868 AGACGCTTTCACTTGCATGTC 59.467 47.619 1.56 0.00 0.00 3.06
408 409 1.597742 AGACGCTTTCACTTGCATGT 58.402 45.000 0.00 0.00 0.00 3.21
409 410 4.346734 AATAGACGCTTTCACTTGCATG 57.653 40.909 0.00 0.00 0.00 4.06
410 411 6.316140 TGATTAATAGACGCTTTCACTTGCAT 59.684 34.615 0.00 0.00 0.00 3.96
411 412 5.641636 TGATTAATAGACGCTTTCACTTGCA 59.358 36.000 0.00 0.00 0.00 4.08
412 413 6.106877 TGATTAATAGACGCTTTCACTTGC 57.893 37.500 0.00 0.00 0.00 4.01
413 414 6.709643 CCTGATTAATAGACGCTTTCACTTG 58.290 40.000 0.00 0.00 0.00 3.16
414 415 5.294552 GCCTGATTAATAGACGCTTTCACTT 59.705 40.000 0.00 0.00 0.00 3.16
415 416 4.811557 GCCTGATTAATAGACGCTTTCACT 59.188 41.667 0.00 0.00 0.00 3.41
416 417 4.318121 CGCCTGATTAATAGACGCTTTCAC 60.318 45.833 0.00 0.00 0.00 3.18
417 418 3.802139 CGCCTGATTAATAGACGCTTTCA 59.198 43.478 0.00 0.00 0.00 2.69
418 419 3.363084 GCGCCTGATTAATAGACGCTTTC 60.363 47.826 13.99 0.00 41.50 2.62
419 420 2.544267 GCGCCTGATTAATAGACGCTTT 59.456 45.455 13.99 0.00 41.50 3.51
420 421 2.135933 GCGCCTGATTAATAGACGCTT 58.864 47.619 13.99 0.00 41.50 4.68
421 422 1.784525 GCGCCTGATTAATAGACGCT 58.215 50.000 13.99 0.00 41.50 5.07
422 423 0.435008 CGCGCCTGATTAATAGACGC 59.565 55.000 0.00 12.16 41.32 5.19
423 424 2.046283 TCGCGCCTGATTAATAGACG 57.954 50.000 0.00 0.00 0.00 4.18
424 425 3.123621 CCATTCGCGCCTGATTAATAGAC 59.876 47.826 0.00 0.00 0.00 2.59
425 426 3.325870 CCATTCGCGCCTGATTAATAGA 58.674 45.455 0.00 0.00 0.00 1.98
426 427 2.416547 CCCATTCGCGCCTGATTAATAG 59.583 50.000 0.00 0.00 0.00 1.73
427 428 2.422597 CCCATTCGCGCCTGATTAATA 58.577 47.619 0.00 0.00 0.00 0.98
428 429 1.238439 CCCATTCGCGCCTGATTAAT 58.762 50.000 0.00 0.00 0.00 1.40
429 430 0.817634 CCCCATTCGCGCCTGATTAA 60.818 55.000 0.00 0.00 0.00 1.40
430 431 1.227823 CCCCATTCGCGCCTGATTA 60.228 57.895 0.00 0.00 0.00 1.75
431 432 2.516930 CCCCATTCGCGCCTGATT 60.517 61.111 0.00 0.00 0.00 2.57
432 433 3.479203 TCCCCATTCGCGCCTGAT 61.479 61.111 0.00 0.00 0.00 2.90
433 434 4.467084 GTCCCCATTCGCGCCTGA 62.467 66.667 0.00 0.00 0.00 3.86
434 435 4.776322 TGTCCCCATTCGCGCCTG 62.776 66.667 0.00 0.12 0.00 4.85
435 436 4.473520 CTGTCCCCATTCGCGCCT 62.474 66.667 0.00 0.00 0.00 5.52
436 437 4.467084 TCTGTCCCCATTCGCGCC 62.467 66.667 0.00 0.00 0.00 6.53
437 438 3.195698 GTCTGTCCCCATTCGCGC 61.196 66.667 0.00 0.00 0.00 6.86
438 439 2.885644 CGTCTGTCCCCATTCGCG 60.886 66.667 0.00 0.00 0.00 5.87
439 440 1.810030 GTCGTCTGTCCCCATTCGC 60.810 63.158 0.00 0.00 0.00 4.70
440 441 1.516386 CGTCGTCTGTCCCCATTCG 60.516 63.158 0.00 0.00 0.00 3.34
441 442 0.245539 TTCGTCGTCTGTCCCCATTC 59.754 55.000 0.00 0.00 0.00 2.67
442 443 0.682852 TTTCGTCGTCTGTCCCCATT 59.317 50.000 0.00 0.00 0.00 3.16
443 444 0.902531 ATTTCGTCGTCTGTCCCCAT 59.097 50.000 0.00 0.00 0.00 4.00
444 445 1.548081 TATTTCGTCGTCTGTCCCCA 58.452 50.000 0.00 0.00 0.00 4.96
445 446 2.094338 ACTTATTTCGTCGTCTGTCCCC 60.094 50.000 0.00 0.00 0.00 4.81
446 447 3.227810 ACTTATTTCGTCGTCTGTCCC 57.772 47.619 0.00 0.00 0.00 4.46
447 448 5.587033 AAAACTTATTTCGTCGTCTGTCC 57.413 39.130 0.00 0.00 0.00 4.02
467 468 0.397187 TCGTCCGATGACCCCAAAAA 59.603 50.000 0.00 0.00 38.32 1.94
468 469 0.397187 TTCGTCCGATGACCCCAAAA 59.603 50.000 0.00 0.00 38.32 2.44
469 470 0.397187 TTTCGTCCGATGACCCCAAA 59.603 50.000 0.00 0.00 38.32 3.28
470 471 0.616371 ATTTCGTCCGATGACCCCAA 59.384 50.000 0.00 0.00 38.32 4.12
471 472 1.487300 TATTTCGTCCGATGACCCCA 58.513 50.000 0.00 0.00 38.32 4.96
472 473 2.480845 CTTATTTCGTCCGATGACCCC 58.519 52.381 0.00 0.00 38.32 4.95
473 474 2.101917 TCCTTATTTCGTCCGATGACCC 59.898 50.000 0.00 0.00 38.32 4.46
474 475 3.121544 GTCCTTATTTCGTCCGATGACC 58.878 50.000 0.00 0.00 38.32 4.02
475 476 3.121544 GGTCCTTATTTCGTCCGATGAC 58.878 50.000 0.00 0.00 38.18 3.06
476 477 3.028850 AGGTCCTTATTTCGTCCGATGA 58.971 45.455 0.00 0.00 0.00 2.92
477 478 3.181479 TGAGGTCCTTATTTCGTCCGATG 60.181 47.826 0.00 0.00 0.00 3.84
478 479 3.028850 TGAGGTCCTTATTTCGTCCGAT 58.971 45.455 0.00 0.00 0.00 4.18
479 480 2.426024 CTGAGGTCCTTATTTCGTCCGA 59.574 50.000 0.00 0.00 0.00 4.55
480 481 2.481449 CCTGAGGTCCTTATTTCGTCCG 60.481 54.545 0.00 0.00 0.00 4.79
481 482 2.158943 CCCTGAGGTCCTTATTTCGTCC 60.159 54.545 0.00 0.00 0.00 4.79
482 483 2.158943 CCCCTGAGGTCCTTATTTCGTC 60.159 54.545 0.00 0.00 0.00 4.20
483 484 1.838077 CCCCTGAGGTCCTTATTTCGT 59.162 52.381 0.00 0.00 0.00 3.85
484 485 2.622064 CCCCTGAGGTCCTTATTTCG 57.378 55.000 0.00 0.00 0.00 3.46
495 496 2.806945 TTGCTAAATGACCCCTGAGG 57.193 50.000 0.00 0.00 43.78 3.86
496 497 5.665916 ATTTTTGCTAAATGACCCCTGAG 57.334 39.130 0.00 0.00 0.00 3.35
497 498 7.732222 ATTATTTTTGCTAAATGACCCCTGA 57.268 32.000 7.39 0.00 0.00 3.86
498 499 8.695456 AGTATTATTTTTGCTAAATGACCCCTG 58.305 33.333 7.39 0.00 0.00 4.45
499 500 8.695456 CAGTATTATTTTTGCTAAATGACCCCT 58.305 33.333 7.39 0.00 0.00 4.79
500 501 7.438160 GCAGTATTATTTTTGCTAAATGACCCC 59.562 37.037 7.39 0.00 33.88 4.95
501 502 7.167468 CGCAGTATTATTTTTGCTAAATGACCC 59.833 37.037 7.39 0.00 34.50 4.46
502 503 7.305993 GCGCAGTATTATTTTTGCTAAATGACC 60.306 37.037 0.30 0.00 34.50 4.02
503 504 7.432252 AGCGCAGTATTATTTTTGCTAAATGAC 59.568 33.333 11.47 4.18 34.50 3.06
504 505 7.479980 AGCGCAGTATTATTTTTGCTAAATGA 58.520 30.769 11.47 1.20 34.50 2.57
505 506 7.684062 AGCGCAGTATTATTTTTGCTAAATG 57.316 32.000 11.47 0.00 34.50 2.32
506 507 7.973388 TCAAGCGCAGTATTATTTTTGCTAAAT 59.027 29.630 11.47 0.00 34.50 1.40
507 508 7.309177 TCAAGCGCAGTATTATTTTTGCTAAA 58.691 30.769 11.47 0.00 34.50 1.85
508 509 6.847400 TCAAGCGCAGTATTATTTTTGCTAA 58.153 32.000 11.47 0.00 34.50 3.09
509 510 6.429791 TCAAGCGCAGTATTATTTTTGCTA 57.570 33.333 11.47 0.00 34.50 3.49
510 511 5.309323 TCAAGCGCAGTATTATTTTTGCT 57.691 34.783 11.47 0.00 34.50 3.91
511 512 5.496969 CGTTCAAGCGCAGTATTATTTTTGC 60.497 40.000 11.47 0.00 0.00 3.68
512 513 5.567534 ACGTTCAAGCGCAGTATTATTTTTG 59.432 36.000 11.47 0.63 34.88 2.44
513 514 5.695818 ACGTTCAAGCGCAGTATTATTTTT 58.304 33.333 11.47 0.00 34.88 1.94
514 515 5.291293 ACGTTCAAGCGCAGTATTATTTT 57.709 34.783 11.47 0.00 34.88 1.82
515 516 4.939509 ACGTTCAAGCGCAGTATTATTT 57.060 36.364 11.47 0.00 34.88 1.40
516 517 6.598753 AATACGTTCAAGCGCAGTATTATT 57.401 33.333 11.47 0.56 36.57 1.40
517 518 6.561533 CGAAATACGTTCAAGCGCAGTATTAT 60.562 38.462 11.47 6.70 37.11 1.28
518 519 5.276020 CGAAATACGTTCAAGCGCAGTATTA 60.276 40.000 11.47 0.00 37.11 0.98
519 520 4.491924 CGAAATACGTTCAAGCGCAGTATT 60.492 41.667 11.47 11.99 38.99 1.89
520 521 3.000078 CGAAATACGTTCAAGCGCAGTAT 60.000 43.478 11.47 6.51 35.83 2.12
521 522 2.343246 CGAAATACGTTCAAGCGCAGTA 59.657 45.455 11.47 4.28 35.83 2.74
522 523 1.126113 CGAAATACGTTCAAGCGCAGT 59.874 47.619 11.47 1.89 35.83 4.40
523 524 1.785881 CGAAATACGTTCAAGCGCAG 58.214 50.000 11.47 0.72 35.83 5.18
524 525 3.939171 CGAAATACGTTCAAGCGCA 57.061 47.368 11.47 0.00 35.83 6.09
535 536 3.855950 CGTACAGGGAAGTCACGAAATAC 59.144 47.826 0.00 0.00 34.66 1.89
536 537 3.674138 GCGTACAGGGAAGTCACGAAATA 60.674 47.826 0.00 0.00 34.66 1.40
537 538 2.929592 GCGTACAGGGAAGTCACGAAAT 60.930 50.000 0.00 0.00 34.66 2.17
538 539 1.603678 GCGTACAGGGAAGTCACGAAA 60.604 52.381 0.00 0.00 34.66 3.46
539 540 0.038892 GCGTACAGGGAAGTCACGAA 60.039 55.000 0.00 0.00 34.66 3.85
540 541 1.582968 GCGTACAGGGAAGTCACGA 59.417 57.895 0.00 0.00 34.66 4.35
541 542 1.800315 CGCGTACAGGGAAGTCACG 60.800 63.158 0.00 0.00 35.78 4.35
542 543 2.092882 GCGCGTACAGGGAAGTCAC 61.093 63.158 8.43 0.00 34.27 3.67
543 544 2.260434 GCGCGTACAGGGAAGTCA 59.740 61.111 8.43 0.00 34.27 3.41
544 545 2.807631 TTCGCGCGTACAGGGAAGTC 62.808 60.000 30.98 0.00 35.97 3.01
545 546 2.922950 TTCGCGCGTACAGGGAAGT 61.923 57.895 30.98 0.00 35.97 3.01
546 547 2.126228 TTCGCGCGTACAGGGAAG 60.126 61.111 30.98 0.00 35.97 3.46
547 548 2.431260 GTTCGCGCGTACAGGGAA 60.431 61.111 30.63 13.87 38.05 3.97
548 549 4.424566 GGTTCGCGCGTACAGGGA 62.425 66.667 34.59 11.46 34.27 4.20
551 552 4.728102 TGGGGTTCGCGCGTACAG 62.728 66.667 34.59 7.42 0.00 2.74
552 553 4.728102 CTGGGGTTCGCGCGTACA 62.728 66.667 34.59 22.67 0.00 2.90
570 571 4.441695 TCTTCTGGCTCGCGGCTG 62.442 66.667 17.07 11.38 41.46 4.85
571 572 4.443266 GTCTTCTGGCTCGCGGCT 62.443 66.667 17.07 0.00 41.46 5.52
575 576 3.708220 CTCCCGTCTTCTGGCTCGC 62.708 68.421 0.00 0.00 0.00 5.03
576 577 2.492090 CTCCCGTCTTCTGGCTCG 59.508 66.667 0.00 0.00 0.00 5.03
577 578 2.185608 GCTCCCGTCTTCTGGCTC 59.814 66.667 0.00 0.00 0.00 4.70
578 579 3.394836 GGCTCCCGTCTTCTGGCT 61.395 66.667 0.00 0.00 0.00 4.75
579 580 4.475135 GGGCTCCCGTCTTCTGGC 62.475 72.222 0.00 0.00 0.00 4.85
580 581 3.787001 GGGGCTCCCGTCTTCTGG 61.787 72.222 0.00 0.00 36.85 3.86
597 598 0.613260 TTGTGGTGAAGGATCCGGAG 59.387 55.000 11.34 0.00 0.00 4.63
598 599 0.613260 CTTGTGGTGAAGGATCCGGA 59.387 55.000 6.61 6.61 0.00 5.14
599 600 0.613260 TCTTGTGGTGAAGGATCCGG 59.387 55.000 5.98 0.00 0.00 5.14
600 601 2.350522 CTTCTTGTGGTGAAGGATCCG 58.649 52.381 5.98 0.00 37.75 4.18
601 602 2.087646 GCTTCTTGTGGTGAAGGATCC 58.912 52.381 2.48 2.48 40.70 3.36
602 603 2.087646 GGCTTCTTGTGGTGAAGGATC 58.912 52.381 0.00 0.00 40.70 3.36
603 604 1.425066 TGGCTTCTTGTGGTGAAGGAT 59.575 47.619 0.00 0.00 40.70 3.24
604 605 0.843309 TGGCTTCTTGTGGTGAAGGA 59.157 50.000 0.00 0.00 40.70 3.36
605 606 0.954452 GTGGCTTCTTGTGGTGAAGG 59.046 55.000 0.00 0.00 40.70 3.46
606 607 0.954452 GGTGGCTTCTTGTGGTGAAG 59.046 55.000 0.00 0.00 42.58 3.02
607 608 0.550914 AGGTGGCTTCTTGTGGTGAA 59.449 50.000 0.00 0.00 0.00 3.18
608 609 0.108585 GAGGTGGCTTCTTGTGGTGA 59.891 55.000 0.00 0.00 0.00 4.02
615 616 2.048127 GACGCGAGGTGGCTTCTT 60.048 61.111 15.93 0.00 0.00 2.52
682 683 2.290450 GGGGATTCGGTTTGGTTGTAGA 60.290 50.000 0.00 0.00 0.00 2.59
819 3540 5.067936 CGAGGGAATATTACGAGATGCCTAT 59.932 44.000 0.00 0.00 31.43 2.57
963 8081 4.507335 CCTTCTTCCTGGACTTGGATTTCA 60.507 45.833 0.00 0.00 33.09 2.69
1057 8181 1.299620 CGTCGACGACCCAGTTGTT 60.300 57.895 33.35 0.00 43.02 2.83
1144 8268 2.124403 GTGCAGCTCCCCCATGAG 60.124 66.667 0.00 0.00 35.40 2.90
1508 8635 3.839432 GCTTCCTAGCGCCGTCCT 61.839 66.667 2.29 0.00 37.71 3.85
1518 8645 2.623889 GAGGTAGATGAAGCGCTTCCTA 59.376 50.000 39.25 30.94 38.77 2.94
1671 8798 2.435586 CCCTTGCTGTCGCTCCAG 60.436 66.667 0.00 0.00 36.97 3.86
1813 8943 5.709140 GTTTAAAACGCTTCAATCAGTCG 57.291 39.130 0.00 0.00 0.00 4.18
2688 9884 3.519107 TCAGAACCAAGATGCTCCATACA 59.481 43.478 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.