Multiple sequence alignment - TraesCS3B01G321700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G321700 chr3B 100.000 3109 0 0 1 3109 521216049 521219157 0.000000e+00 5742.0
1 TraesCS3B01G321700 chr3B 94.466 1283 55 13 697 1973 521475847 521477119 0.000000e+00 1962.0
2 TraesCS3B01G321700 chr3B 93.136 1282 59 15 697 1973 521609287 521610544 0.000000e+00 1853.0
3 TraesCS3B01G321700 chr3B 93.957 1175 57 11 802 1971 521687800 521688965 0.000000e+00 1764.0
4 TraesCS3B01G321700 chr3B 93.566 1088 54 12 704 1784 521404928 521406006 0.000000e+00 1607.0
5 TraesCS3B01G321700 chr3B 96.000 200 8 0 1774 1973 521413619 521413818 2.990000e-85 326.0
6 TraesCS3B01G321700 chr3B 85.294 306 36 5 2241 2545 521415562 521415859 1.080000e-79 307.0
7 TraesCS3B01G321700 chr3B 84.641 306 38 5 2241 2545 521478872 521479169 2.340000e-76 296.0
8 TraesCS3B01G321700 chr3B 93.373 166 9 1 1 164 354018266 354018101 8.610000e-61 244.0
9 TraesCS3B01G321700 chr3B 92.683 164 10 1 1 162 826370044 826369881 5.180000e-58 235.0
10 TraesCS3B01G321700 chr3B 92.593 162 10 1 1 160 129515455 129515294 6.710000e-57 231.0
11 TraesCS3B01G321700 chr3B 93.966 116 7 0 697 812 521684977 521685092 3.190000e-40 176.0
12 TraesCS3B01G321700 chr3B 89.474 133 10 3 290 420 521609158 521609288 6.900000e-37 165.0
13 TraesCS3B01G321700 chr3B 89.231 130 10 3 293 420 521684851 521684978 3.210000e-35 159.0
14 TraesCS3B01G321700 chr3B 90.476 84 6 1 337 420 521475767 521475848 3.280000e-20 110.0
15 TraesCS3B01G321700 chr3B 79.762 168 13 4 1977 2136 521477210 521477364 5.490000e-18 102.0
16 TraesCS3B01G321700 chr3B 86.076 79 6 1 2063 2136 521610758 521610836 2.570000e-11 80.5
17 TraesCS3B01G321700 chr3D 93.463 1285 62 14 694 1971 396204768 396206037 0.000000e+00 1888.0
18 TraesCS3B01G321700 chr3D 92.739 1267 44 14 697 1961 395832597 395833817 0.000000e+00 1786.0
19 TraesCS3B01G321700 chr3D 92.356 1269 59 12 701 1966 395836975 395838208 0.000000e+00 1772.0
20 TraesCS3B01G321700 chr3D 82.736 307 39 9 2241 2545 395838796 395839090 8.550000e-66 261.0
21 TraesCS3B01G321700 chr3D 89.529 191 17 3 506 696 31402465 31402652 4.010000e-59 239.0
22 TraesCS3B01G321700 chr3D 89.333 150 13 3 271 420 395832452 395832598 5.290000e-43 185.0
23 TraesCS3B01G321700 chr3D 93.750 48 3 0 189 236 100849789 100849836 4.300000e-09 73.1
24 TraesCS3B01G321700 chr3A 92.040 1294 54 27 697 1974 515860823 515862083 0.000000e+00 1773.0
25 TraesCS3B01G321700 chr3A 88.000 125 11 3 278 401 515860684 515860805 8.990000e-31 145.0
26 TraesCS3B01G321700 chr7D 86.542 535 53 11 2576 3109 179193278 179193794 3.480000e-159 571.0
27 TraesCS3B01G321700 chr6A 86.162 542 56 11 2569 3109 201359955 201359432 4.500000e-158 568.0
28 TraesCS3B01G321700 chr6A 86.364 66 9 0 178 243 109490283 109490218 4.300000e-09 73.1
29 TraesCS3B01G321700 chr2A 86.391 507 47 10 2604 3109 35649145 35648660 4.560000e-148 534.0
30 TraesCS3B01G321700 chrUn 85.039 508 52 13 2568 3074 134308139 134307655 2.150000e-136 496.0
31 TraesCS3B01G321700 chrUn 92.216 167 11 1 1 165 50774111 50773945 5.180000e-58 235.0
32 TraesCS3B01G321700 chrUn 100.000 28 0 0 3082 3109 134307661 134307634 6.000000e-03 52.8
33 TraesCS3B01G321700 chr6B 91.500 200 11 2 503 697 504606984 504607182 1.420000e-68 270.0
34 TraesCS3B01G321700 chr6B 84.524 252 37 1 430 679 558226421 558226170 6.660000e-62 248.0
35 TraesCS3B01G321700 chr6B 91.061 179 14 1 503 679 542925407 542925229 1.110000e-59 241.0
36 TraesCS3B01G321700 chr6B 88.832 197 15 2 506 696 694568875 694569070 5.180000e-58 235.0
37 TraesCS3B01G321700 chr7B 92.614 176 11 1 506 679 677748642 677748467 5.150000e-63 252.0
38 TraesCS3B01G321700 chr7B 87.629 194 23 1 503 696 60081529 60081721 1.120000e-54 224.0
39 TraesCS3B01G321700 chr4B 92.614 176 11 2 503 677 468250439 468250613 5.150000e-63 252.0
40 TraesCS3B01G321700 chr4B 90.805 174 12 2 1 170 592991312 592991139 2.410000e-56 230.0
41 TraesCS3B01G321700 chr4B 100.000 30 0 0 2174 2203 665808027 665807998 4.330000e-04 56.5
42 TraesCS3B01G321700 chr2B 88.177 203 17 2 484 679 672526712 672526510 5.180000e-58 235.0
43 TraesCS3B01G321700 chr4A 91.566 166 12 1 1 164 712529444 712529279 8.670000e-56 228.0
44 TraesCS3B01G321700 chr4A 91.463 164 12 1 1 162 646079591 646079754 1.120000e-54 224.0
45 TraesCS3B01G321700 chr1D 91.463 164 12 1 1 162 373099656 373099493 1.120000e-54 224.0
46 TraesCS3B01G321700 chr1D 91.018 167 12 2 1 164 403567992 403568158 4.040000e-54 222.0
47 TraesCS3B01G321700 chr5A 100.000 30 0 0 2174 2203 705769981 705769952 4.330000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G321700 chr3B 521216049 521219157 3108 False 5742.000000 5742 100.000000 1 3109 1 chr3B.!!$F1 3108
1 TraesCS3B01G321700 chr3B 521404928 521406006 1078 False 1607.000000 1607 93.566000 704 1784 1 chr3B.!!$F2 1080
2 TraesCS3B01G321700 chr3B 521684851 521688965 4114 False 699.666667 1764 92.384667 293 1971 3 chr3B.!!$F6 1678
3 TraesCS3B01G321700 chr3B 521609158 521610836 1678 False 699.500000 1853 89.562000 290 2136 3 chr3B.!!$F5 1846
4 TraesCS3B01G321700 chr3B 521475767 521479169 3402 False 617.500000 1962 87.336250 337 2545 4 chr3B.!!$F4 2208
5 TraesCS3B01G321700 chr3B 521413619 521415859 2240 False 316.500000 326 90.647000 1774 2545 2 chr3B.!!$F3 771
6 TraesCS3B01G321700 chr3D 396204768 396206037 1269 False 1888.000000 1888 93.463000 694 1971 1 chr3D.!!$F3 1277
7 TraesCS3B01G321700 chr3D 395832452 395839090 6638 False 1001.000000 1786 89.291000 271 2545 4 chr3D.!!$F4 2274
8 TraesCS3B01G321700 chr3A 515860684 515862083 1399 False 959.000000 1773 90.020000 278 1974 2 chr3A.!!$F1 1696
9 TraesCS3B01G321700 chr7D 179193278 179193794 516 False 571.000000 571 86.542000 2576 3109 1 chr7D.!!$F1 533
10 TraesCS3B01G321700 chr6A 201359432 201359955 523 True 568.000000 568 86.162000 2569 3109 1 chr6A.!!$R2 540
11 TraesCS3B01G321700 chrUn 134307634 134308139 505 True 274.400000 496 92.519500 2568 3109 2 chrUn.!!$R2 541

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
261 262 0.03213 TCTGCGTTCAAAGCTCTCGT 59.968 50.0 0.0 0.0 35.28 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2112 9448 0.251916 TCGATGGGCCGAAATTGACT 59.748 50.0 0.0 0.0 35.42 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 1.904287 TTTGACAGATCCGTTTGGGG 58.096 50.000 0.00 0.00 36.01 4.96
55 56 0.037590 TTGACAGATCCGTTTGGGGG 59.962 55.000 0.00 0.00 36.01 5.40
78 79 4.003534 CATCTGTGCTAGTCCGCG 57.996 61.111 0.00 0.00 0.00 6.46
79 80 1.139734 CATCTGTGCTAGTCCGCGT 59.860 57.895 4.92 0.00 0.00 6.01
80 81 0.867753 CATCTGTGCTAGTCCGCGTC 60.868 60.000 4.92 0.00 0.00 5.19
81 82 2.324332 ATCTGTGCTAGTCCGCGTCG 62.324 60.000 4.92 0.00 0.00 5.12
92 93 4.741781 CGCGTCGGCCTGCAAAAG 62.742 66.667 0.00 0.00 35.02 2.27
93 94 3.660111 GCGTCGGCCTGCAAAAGT 61.660 61.111 0.00 0.00 0.00 2.66
94 95 2.252260 CGTCGGCCTGCAAAAGTG 59.748 61.111 0.00 0.00 0.00 3.16
95 96 2.644992 GTCGGCCTGCAAAAGTGG 59.355 61.111 0.00 0.00 0.00 4.00
96 97 2.193536 GTCGGCCTGCAAAAGTGGT 61.194 57.895 0.00 0.00 0.00 4.16
97 98 1.454847 TCGGCCTGCAAAAGTGGTT 60.455 52.632 0.00 0.00 0.00 3.67
98 99 1.040339 TCGGCCTGCAAAAGTGGTTT 61.040 50.000 0.00 0.00 0.00 3.27
99 100 0.179086 CGGCCTGCAAAAGTGGTTTT 60.179 50.000 0.00 0.00 36.22 2.43
105 106 2.950877 CAAAAGTGGTTTTGCGCGA 58.049 47.368 12.10 0.00 44.56 5.87
106 107 1.272781 CAAAAGTGGTTTTGCGCGAA 58.727 45.000 12.10 5.81 44.56 4.70
107 108 1.006494 CAAAAGTGGTTTTGCGCGAAC 60.006 47.619 12.10 13.55 44.56 3.95
108 109 0.454196 AAAGTGGTTTTGCGCGAACT 59.546 45.000 12.10 9.65 0.00 3.01
109 110 0.248458 AAGTGGTTTTGCGCGAACTG 60.248 50.000 12.10 0.00 0.00 3.16
110 111 2.025441 TGGTTTTGCGCGAACTGC 59.975 55.556 12.10 10.64 41.47 4.40
111 112 2.025441 GGTTTTGCGCGAACTGCA 59.975 55.556 12.10 0.00 46.97 4.41
116 117 3.338674 TGCGCGAACTGCAAATGA 58.661 50.000 12.10 0.00 46.97 2.57
117 118 1.207339 TGCGCGAACTGCAAATGAG 59.793 52.632 12.10 0.00 46.97 2.90
118 119 1.207593 GCGCGAACTGCAAATGAGT 59.792 52.632 12.10 0.00 46.97 3.41
119 120 0.385974 GCGCGAACTGCAAATGAGTT 60.386 50.000 12.10 0.00 46.97 3.01
120 121 1.925946 GCGCGAACTGCAAATGAGTTT 60.926 47.619 12.10 0.00 46.97 2.66
121 122 2.384382 CGCGAACTGCAAATGAGTTTT 58.616 42.857 0.00 0.00 46.97 2.43
122 123 2.151736 CGCGAACTGCAAATGAGTTTTG 59.848 45.455 0.00 0.00 46.97 2.44
128 129 2.826277 CAAATGAGTTTTGCGGGCC 58.174 52.632 0.00 0.00 38.42 5.80
129 130 1.008361 CAAATGAGTTTTGCGGGCCG 61.008 55.000 24.35 24.35 38.42 6.13
130 131 2.153547 AAATGAGTTTTGCGGGCCGG 62.154 55.000 29.48 9.71 0.00 6.13
149 150 3.161450 GGGATGCGGGGTCTGCTA 61.161 66.667 0.30 0.00 0.00 3.49
150 151 2.423446 GGATGCGGGGTCTGCTAG 59.577 66.667 0.30 0.00 0.00 3.42
151 152 2.134287 GGATGCGGGGTCTGCTAGA 61.134 63.158 0.00 0.00 0.00 2.43
152 153 1.365633 GATGCGGGGTCTGCTAGAG 59.634 63.158 0.00 0.00 0.00 2.43
153 154 1.381872 ATGCGGGGTCTGCTAGAGT 60.382 57.895 0.00 0.00 0.00 3.24
154 155 0.978146 ATGCGGGGTCTGCTAGAGTT 60.978 55.000 0.00 0.00 0.00 3.01
155 156 1.153549 GCGGGGTCTGCTAGAGTTG 60.154 63.158 0.00 0.00 0.00 3.16
156 157 1.153549 CGGGGTCTGCTAGAGTTGC 60.154 63.158 0.00 0.00 0.00 4.17
157 158 1.608717 CGGGGTCTGCTAGAGTTGCT 61.609 60.000 0.00 0.00 0.00 3.91
158 159 0.176910 GGGGTCTGCTAGAGTTGCTC 59.823 60.000 0.00 0.00 0.00 4.26
159 160 1.190643 GGGTCTGCTAGAGTTGCTCT 58.809 55.000 4.02 4.02 43.83 4.09
160 161 2.379972 GGGTCTGCTAGAGTTGCTCTA 58.620 52.381 0.00 5.84 41.50 2.43
161 162 2.761208 GGGTCTGCTAGAGTTGCTCTAA 59.239 50.000 7.22 0.00 41.74 2.10
162 163 3.429684 GGGTCTGCTAGAGTTGCTCTAAC 60.430 52.174 7.22 4.03 41.74 2.34
163 164 3.193691 GGTCTGCTAGAGTTGCTCTAACA 59.806 47.826 7.22 7.86 41.74 2.41
164 165 4.170256 GTCTGCTAGAGTTGCTCTAACAC 58.830 47.826 7.22 1.94 41.74 3.32
165 166 3.193691 TCTGCTAGAGTTGCTCTAACACC 59.806 47.826 7.22 0.00 41.74 4.16
166 167 3.165875 TGCTAGAGTTGCTCTAACACCT 58.834 45.455 7.22 0.00 41.74 4.00
167 168 3.056536 TGCTAGAGTTGCTCTAACACCTG 60.057 47.826 7.22 0.00 41.74 4.00
168 169 3.193691 GCTAGAGTTGCTCTAACACCTGA 59.806 47.826 7.22 0.00 41.74 3.86
169 170 4.142049 GCTAGAGTTGCTCTAACACCTGAT 60.142 45.833 7.22 0.00 41.74 2.90
170 171 4.199432 AGAGTTGCTCTAACACCTGATG 57.801 45.455 0.00 0.00 39.28 3.07
171 172 2.675348 GAGTTGCTCTAACACCTGATGC 59.325 50.000 0.00 0.00 41.88 3.91
172 173 2.038952 AGTTGCTCTAACACCTGATGCA 59.961 45.455 0.00 0.00 41.88 3.96
173 174 2.391616 TGCTCTAACACCTGATGCAG 57.608 50.000 0.00 0.00 0.00 4.41
174 175 1.901833 TGCTCTAACACCTGATGCAGA 59.098 47.619 0.00 0.00 32.44 4.26
175 176 2.275318 GCTCTAACACCTGATGCAGAC 58.725 52.381 0.00 0.00 32.44 3.51
176 177 2.354103 GCTCTAACACCTGATGCAGACA 60.354 50.000 0.00 0.00 32.44 3.41
177 178 3.866066 GCTCTAACACCTGATGCAGACAA 60.866 47.826 0.00 0.00 32.44 3.18
178 179 3.664107 TCTAACACCTGATGCAGACAAC 58.336 45.455 0.00 0.00 32.44 3.32
179 180 1.609208 AACACCTGATGCAGACAACC 58.391 50.000 0.00 0.00 32.44 3.77
180 181 0.250901 ACACCTGATGCAGACAACCC 60.251 55.000 0.00 0.00 32.44 4.11
181 182 0.250858 CACCTGATGCAGACAACCCA 60.251 55.000 0.00 0.00 32.44 4.51
182 183 0.478072 ACCTGATGCAGACAACCCAA 59.522 50.000 0.00 0.00 32.44 4.12
183 184 0.883833 CCTGATGCAGACAACCCAAC 59.116 55.000 0.00 0.00 32.44 3.77
184 185 1.546323 CCTGATGCAGACAACCCAACT 60.546 52.381 0.00 0.00 32.44 3.16
185 186 1.538512 CTGATGCAGACAACCCAACTG 59.461 52.381 0.00 0.00 32.44 3.16
186 187 0.883833 GATGCAGACAACCCAACTGG 59.116 55.000 0.00 0.00 41.37 4.00
198 199 2.198827 CCAACTGGGACAAGCATACA 57.801 50.000 0.00 0.00 38.70 2.29
199 200 2.513753 CCAACTGGGACAAGCATACAA 58.486 47.619 0.00 0.00 38.70 2.41
200 201 2.890311 CCAACTGGGACAAGCATACAAA 59.110 45.455 0.00 0.00 38.70 2.83
201 202 3.320541 CCAACTGGGACAAGCATACAAAA 59.679 43.478 0.00 0.00 38.70 2.44
202 203 4.021192 CCAACTGGGACAAGCATACAAAAT 60.021 41.667 0.00 0.00 38.70 1.82
203 204 4.789012 ACTGGGACAAGCATACAAAATG 57.211 40.909 0.00 0.00 38.70 2.32
204 205 3.056607 ACTGGGACAAGCATACAAAATGC 60.057 43.478 1.74 1.74 44.85 3.56
217 218 8.519492 GCATACAAAATGCTCTAAAACAAAGA 57.481 30.769 2.78 0.00 41.52 2.52
218 219 9.143631 GCATACAAAATGCTCTAAAACAAAGAT 57.856 29.630 2.78 0.00 41.52 2.40
221 222 8.356533 ACAAAATGCTCTAAAACAAAGATGTG 57.643 30.769 0.00 0.00 40.46 3.21
222 223 8.196771 ACAAAATGCTCTAAAACAAAGATGTGA 58.803 29.630 0.00 0.00 40.46 3.58
223 224 9.033481 CAAAATGCTCTAAAACAAAGATGTGAA 57.967 29.630 0.00 0.00 40.46 3.18
224 225 8.579682 AAATGCTCTAAAACAAAGATGTGAAC 57.420 30.769 0.00 0.00 40.46 3.18
225 226 6.072112 TGCTCTAAAACAAAGATGTGAACC 57.928 37.500 0.00 0.00 40.46 3.62
226 227 5.592282 TGCTCTAAAACAAAGATGTGAACCA 59.408 36.000 0.00 0.00 40.46 3.67
227 228 6.096141 TGCTCTAAAACAAAGATGTGAACCAA 59.904 34.615 0.00 0.00 40.46 3.67
228 229 6.978080 GCTCTAAAACAAAGATGTGAACCAAA 59.022 34.615 0.00 0.00 40.46 3.28
229 230 7.043391 GCTCTAAAACAAAGATGTGAACCAAAC 60.043 37.037 0.00 0.00 40.46 2.93
230 231 6.970043 TCTAAAACAAAGATGTGAACCAAACG 59.030 34.615 0.00 0.00 40.46 3.60
231 232 3.078594 ACAAAGATGTGAACCAAACGC 57.921 42.857 0.00 0.00 38.69 4.84
232 233 2.425312 ACAAAGATGTGAACCAAACGCA 59.575 40.909 0.00 0.00 38.69 5.24
233 234 3.068024 ACAAAGATGTGAACCAAACGCAT 59.932 39.130 0.00 0.00 38.69 4.73
235 236 2.262572 GATGTGAACCAAACGCATCC 57.737 50.000 0.00 0.00 44.42 3.51
236 237 0.521291 ATGTGAACCAAACGCATCCG 59.479 50.000 0.00 0.00 34.04 4.18
246 247 3.630204 CGCATCCGTGGTATCTGC 58.370 61.111 0.00 0.00 0.00 4.26
247 248 3.630204 GCATCCGTGGTATCTGCG 58.370 61.111 0.00 0.00 0.00 5.18
248 249 1.227263 GCATCCGTGGTATCTGCGT 60.227 57.895 0.00 0.00 0.00 5.24
249 250 0.810031 GCATCCGTGGTATCTGCGTT 60.810 55.000 0.00 0.00 0.00 4.84
250 251 1.209128 CATCCGTGGTATCTGCGTTC 58.791 55.000 0.00 0.00 0.00 3.95
251 252 0.821517 ATCCGTGGTATCTGCGTTCA 59.178 50.000 0.00 0.00 0.00 3.18
252 253 0.604073 TCCGTGGTATCTGCGTTCAA 59.396 50.000 0.00 0.00 0.00 2.69
253 254 1.001068 TCCGTGGTATCTGCGTTCAAA 59.999 47.619 0.00 0.00 0.00 2.69
254 255 1.393539 CCGTGGTATCTGCGTTCAAAG 59.606 52.381 0.00 0.00 0.00 2.77
255 256 1.201921 CGTGGTATCTGCGTTCAAAGC 60.202 52.381 0.00 0.00 0.00 3.51
256 257 2.076863 GTGGTATCTGCGTTCAAAGCT 58.923 47.619 0.00 0.00 35.28 3.74
257 258 2.094417 GTGGTATCTGCGTTCAAAGCTC 59.906 50.000 0.00 0.00 35.28 4.09
258 259 2.028112 TGGTATCTGCGTTCAAAGCTCT 60.028 45.455 0.00 0.00 35.28 4.09
259 260 2.605366 GGTATCTGCGTTCAAAGCTCTC 59.395 50.000 0.00 0.00 35.28 3.20
260 261 1.354040 ATCTGCGTTCAAAGCTCTCG 58.646 50.000 0.00 0.00 35.28 4.04
261 262 0.032130 TCTGCGTTCAAAGCTCTCGT 59.968 50.000 0.00 0.00 35.28 4.18
262 263 1.268625 TCTGCGTTCAAAGCTCTCGTA 59.731 47.619 0.00 0.00 35.28 3.43
263 264 1.387084 CTGCGTTCAAAGCTCTCGTAC 59.613 52.381 0.00 0.00 35.28 3.67
264 265 0.714439 GCGTTCAAAGCTCTCGTACC 59.286 55.000 0.00 0.00 0.00 3.34
265 266 1.933500 GCGTTCAAAGCTCTCGTACCA 60.934 52.381 0.00 0.00 0.00 3.25
266 267 2.607187 CGTTCAAAGCTCTCGTACCAT 58.393 47.619 0.00 0.00 0.00 3.55
267 268 2.599082 CGTTCAAAGCTCTCGTACCATC 59.401 50.000 0.00 0.00 0.00 3.51
268 269 2.930682 GTTCAAAGCTCTCGTACCATCC 59.069 50.000 0.00 0.00 0.00 3.51
269 270 1.134367 TCAAAGCTCTCGTACCATCCG 59.866 52.381 0.00 0.00 0.00 4.18
301 302 5.505780 AGTATTTCATGAATTTCCCGGACA 58.494 37.500 9.40 0.00 0.00 4.02
344 347 4.295119 AGACGGGCGCGTGAAAGT 62.295 61.111 34.38 7.60 0.00 2.66
416 419 0.613853 TCCTCCGGATCCTTCACGTT 60.614 55.000 3.57 0.00 0.00 3.99
417 420 0.179108 CCTCCGGATCCTTCACGTTC 60.179 60.000 3.57 0.00 0.00 3.95
418 421 0.530744 CTCCGGATCCTTCACGTTCA 59.469 55.000 3.57 0.00 0.00 3.18
419 422 0.245539 TCCGGATCCTTCACGTTCAC 59.754 55.000 10.75 0.00 0.00 3.18
420 423 0.037697 CCGGATCCTTCACGTTCACA 60.038 55.000 10.75 0.00 0.00 3.58
421 424 1.405526 CCGGATCCTTCACGTTCACAT 60.406 52.381 10.75 0.00 0.00 3.21
422 425 1.927174 CGGATCCTTCACGTTCACATC 59.073 52.381 10.75 0.00 0.00 3.06
423 426 2.280628 GGATCCTTCACGTTCACATCC 58.719 52.381 3.84 0.00 0.00 3.51
424 427 2.354704 GGATCCTTCACGTTCACATCCA 60.355 50.000 3.84 0.00 0.00 3.41
425 428 2.163818 TCCTTCACGTTCACATCCAC 57.836 50.000 0.00 0.00 0.00 4.02
426 429 1.691976 TCCTTCACGTTCACATCCACT 59.308 47.619 0.00 0.00 0.00 4.00
427 430 2.894765 TCCTTCACGTTCACATCCACTA 59.105 45.455 0.00 0.00 0.00 2.74
428 431 3.322541 TCCTTCACGTTCACATCCACTAA 59.677 43.478 0.00 0.00 0.00 2.24
429 432 4.020573 TCCTTCACGTTCACATCCACTAAT 60.021 41.667 0.00 0.00 0.00 1.73
430 433 4.330074 CCTTCACGTTCACATCCACTAATC 59.670 45.833 0.00 0.00 0.00 1.75
431 434 3.857052 TCACGTTCACATCCACTAATCC 58.143 45.455 0.00 0.00 0.00 3.01
432 435 3.513912 TCACGTTCACATCCACTAATCCT 59.486 43.478 0.00 0.00 0.00 3.24
433 436 3.618594 CACGTTCACATCCACTAATCCTG 59.381 47.826 0.00 0.00 0.00 3.86
434 437 3.198068 CGTTCACATCCACTAATCCTGG 58.802 50.000 0.00 0.00 0.00 4.45
435 438 2.945668 GTTCACATCCACTAATCCTGGC 59.054 50.000 0.00 0.00 0.00 4.85
436 439 1.490490 TCACATCCACTAATCCTGGCC 59.510 52.381 0.00 0.00 0.00 5.36
437 440 1.212688 CACATCCACTAATCCTGGCCA 59.787 52.381 4.71 4.71 0.00 5.36
438 441 2.138542 ACATCCACTAATCCTGGCCAT 58.861 47.619 5.51 0.00 0.00 4.40
439 442 3.072915 CACATCCACTAATCCTGGCCATA 59.927 47.826 5.51 0.00 0.00 2.74
440 443 3.328931 ACATCCACTAATCCTGGCCATAG 59.671 47.826 5.51 7.85 0.00 2.23
441 444 2.338809 TCCACTAATCCTGGCCATAGG 58.661 52.381 5.51 4.96 39.29 2.57
450 453 2.203408 GGCCATAGGAAGCCTGGC 60.203 66.667 11.65 11.65 46.14 4.85
451 454 2.203408 GCCATAGGAAGCCTGGCC 60.203 66.667 16.57 0.00 36.90 5.36
452 455 3.060614 GCCATAGGAAGCCTGGCCA 62.061 63.158 16.57 4.71 36.90 5.36
453 456 1.150081 CCATAGGAAGCCTGGCCAG 59.850 63.158 26.87 26.87 34.61 4.85
481 484 4.978705 CCCGACCCGGCCCAAAAA 62.979 66.667 0.00 0.00 46.86 1.94
526 529 3.782443 GAGCCCGGACCCGTCATT 61.782 66.667 0.73 0.00 37.81 2.57
527 530 3.325201 GAGCCCGGACCCGTCATTT 62.325 63.158 0.73 0.00 37.81 2.32
528 531 2.360726 GCCCGGACCCGTCATTTT 60.361 61.111 0.73 0.00 37.81 1.82
529 532 1.974875 GCCCGGACCCGTCATTTTT 60.975 57.895 0.73 0.00 37.81 1.94
530 533 1.880186 CCCGGACCCGTCATTTTTG 59.120 57.895 0.73 0.00 37.81 2.44
531 534 1.211709 CCGGACCCGTCATTTTTGC 59.788 57.895 0.00 0.00 37.81 3.68
532 535 1.519751 CCGGACCCGTCATTTTTGCA 61.520 55.000 0.00 0.00 37.81 4.08
533 536 0.109781 CGGACCCGTCATTTTTGCAG 60.110 55.000 0.00 0.00 34.35 4.41
534 537 0.958822 GGACCCGTCATTTTTGCAGT 59.041 50.000 0.00 0.00 0.00 4.40
535 538 1.339929 GGACCCGTCATTTTTGCAGTT 59.660 47.619 0.00 0.00 0.00 3.16
536 539 2.223947 GGACCCGTCATTTTTGCAGTTT 60.224 45.455 0.00 0.00 0.00 2.66
537 540 3.453424 GACCCGTCATTTTTGCAGTTTT 58.547 40.909 0.00 0.00 0.00 2.43
538 541 3.867857 ACCCGTCATTTTTGCAGTTTTT 58.132 36.364 0.00 0.00 0.00 1.94
553 556 2.128729 TTTTTGAAGGTTGGGCCGG 58.871 52.632 0.00 0.00 43.70 6.13
554 557 1.403687 TTTTTGAAGGTTGGGCCGGG 61.404 55.000 2.18 0.00 43.70 5.73
555 558 4.986708 TTGAAGGTTGGGCCGGGC 62.987 66.667 22.00 22.00 43.70 6.13
585 588 2.403252 CCTGACGGGCTTTTAGATGT 57.597 50.000 0.00 0.00 0.00 3.06
586 589 2.711542 CCTGACGGGCTTTTAGATGTT 58.288 47.619 0.00 0.00 0.00 2.71
587 590 2.678336 CCTGACGGGCTTTTAGATGTTC 59.322 50.000 0.00 0.00 0.00 3.18
588 591 2.343101 TGACGGGCTTTTAGATGTTCG 58.657 47.619 0.00 0.00 0.00 3.95
589 592 1.664151 GACGGGCTTTTAGATGTTCGG 59.336 52.381 0.00 0.00 0.00 4.30
590 593 1.014352 CGGGCTTTTAGATGTTCGGG 58.986 55.000 0.00 0.00 0.00 5.14
591 594 0.738975 GGGCTTTTAGATGTTCGGGC 59.261 55.000 0.00 0.00 0.00 6.13
592 595 0.738975 GGCTTTTAGATGTTCGGGCC 59.261 55.000 0.00 0.00 0.00 5.80
593 596 0.377203 GCTTTTAGATGTTCGGGCCG 59.623 55.000 22.51 22.51 0.00 6.13
594 597 1.014352 CTTTTAGATGTTCGGGCCGG 58.986 55.000 27.98 7.65 0.00 6.13
595 598 0.393267 TTTTAGATGTTCGGGCCGGG 60.393 55.000 27.98 0.00 0.00 5.73
596 599 2.879813 TTTAGATGTTCGGGCCGGGC 62.880 60.000 27.98 22.00 0.00 6.13
608 611 3.003173 CCGGGCTCAGTCCCAGAA 61.003 66.667 0.00 0.00 46.92 3.02
609 612 2.592993 CCGGGCTCAGTCCCAGAAA 61.593 63.158 0.00 0.00 46.92 2.52
610 613 1.376037 CGGGCTCAGTCCCAGAAAC 60.376 63.158 5.17 0.00 46.92 2.78
611 614 1.761174 GGGCTCAGTCCCAGAAACA 59.239 57.895 0.00 0.00 45.82 2.83
612 615 0.606673 GGGCTCAGTCCCAGAAACAC 60.607 60.000 0.00 0.00 45.82 3.32
613 616 0.108585 GGCTCAGTCCCAGAAACACA 59.891 55.000 0.00 0.00 0.00 3.72
614 617 1.517242 GCTCAGTCCCAGAAACACAG 58.483 55.000 0.00 0.00 0.00 3.66
615 618 1.879796 GCTCAGTCCCAGAAACACAGG 60.880 57.143 0.00 0.00 0.00 4.00
616 619 0.108585 TCAGTCCCAGAAACACAGGC 59.891 55.000 0.00 0.00 0.00 4.85
617 620 0.890996 CAGTCCCAGAAACACAGGCC 60.891 60.000 0.00 0.00 0.00 5.19
618 621 1.603739 GTCCCAGAAACACAGGCCC 60.604 63.158 0.00 0.00 0.00 5.80
619 622 2.672996 CCCAGAAACACAGGCCCG 60.673 66.667 0.00 0.00 0.00 6.13
620 623 2.429930 CCAGAAACACAGGCCCGA 59.570 61.111 0.00 0.00 0.00 5.14
621 624 1.002134 CCAGAAACACAGGCCCGAT 60.002 57.895 0.00 0.00 0.00 4.18
622 625 1.308069 CCAGAAACACAGGCCCGATG 61.308 60.000 0.00 0.00 0.00 3.84
623 626 1.002134 AGAAACACAGGCCCGATGG 60.002 57.895 0.00 0.00 0.00 3.51
660 663 1.439644 TTTTTGTGTCGGGCTTGGC 59.560 52.632 0.00 0.00 0.00 4.52
661 664 1.040339 TTTTTGTGTCGGGCTTGGCT 61.040 50.000 0.00 0.00 0.00 4.75
662 665 0.179015 TTTTGTGTCGGGCTTGGCTA 60.179 50.000 0.00 0.00 0.00 3.93
663 666 0.605319 TTTGTGTCGGGCTTGGCTAG 60.605 55.000 0.00 0.00 0.00 3.42
664 667 2.125106 GTGTCGGGCTTGGCTAGG 60.125 66.667 0.00 0.00 0.00 3.02
692 695 4.351054 CCCGAGGTTTGGCCAGCT 62.351 66.667 5.11 0.00 40.61 4.24
695 698 0.468226 CCGAGGTTTGGCCAGCTATA 59.532 55.000 5.11 0.00 40.61 1.31
730 733 2.765250 GAAGCCACCTCGCGTCTTCA 62.765 60.000 5.77 0.00 34.82 3.02
797 800 3.332034 ACTACAAAGAAACCGAATCCCG 58.668 45.455 0.00 0.00 38.18 5.14
1019 8130 1.444553 CTCGTCAAGGCCACTCGAC 60.445 63.158 5.01 4.57 0.00 4.20
1023 8134 2.664851 CAAGGCCACTCGACGCAA 60.665 61.111 5.01 0.00 0.00 4.85
1024 8135 2.110213 AAGGCCACTCGACGCAAA 59.890 55.556 5.01 0.00 0.00 3.68
1077 8206 2.552155 CCACTCCGAAATCCAAGTCCAA 60.552 50.000 0.00 0.00 0.00 3.53
1201 8334 2.962569 CCACGGAGCTCTTCGACA 59.037 61.111 17.62 0.00 0.00 4.35
1740 8876 1.194781 ACCTCATGTGCGAGAACCCT 61.195 55.000 0.00 0.00 34.79 4.34
1948 9085 1.511887 CAACCGTGCTGCATTACGC 60.512 57.895 5.27 3.23 38.87 4.42
1961 9098 3.129638 TGCATTACGCTTAATTTGGGGAC 59.870 43.478 0.00 0.00 43.06 4.46
1974 9115 2.599216 GGGGACCGATACCTTGTCA 58.401 57.895 0.00 0.00 40.86 3.58
2003 9320 4.747108 TGGCGAACTCGATAGTAGTAGTAC 59.253 45.833 2.69 0.00 43.02 2.73
2004 9321 4.747108 GGCGAACTCGATAGTAGTAGTACA 59.253 45.833 10.33 0.00 43.02 2.90
2005 9322 5.107530 GGCGAACTCGATAGTAGTAGTACAG 60.108 48.000 10.33 1.11 43.02 2.74
2006 9323 5.461737 GCGAACTCGATAGTAGTAGTACAGT 59.538 44.000 10.33 1.70 43.02 3.55
2007 9324 6.638873 GCGAACTCGATAGTAGTAGTACAGTA 59.361 42.308 10.33 0.00 43.02 2.74
2008 9325 7.328249 GCGAACTCGATAGTAGTAGTACAGTAT 59.672 40.741 10.33 0.48 43.02 2.12
2028 9345 6.855914 CAGTATTTGACTAATTTGTGCGTGTT 59.144 34.615 0.00 0.00 35.64 3.32
2033 9350 3.211045 ACTAATTTGTGCGTGTTGTCCT 58.789 40.909 0.00 0.00 0.00 3.85
2035 9352 2.490328 ATTTGTGCGTGTTGTCCTTG 57.510 45.000 0.00 0.00 0.00 3.61
2036 9353 1.454201 TTTGTGCGTGTTGTCCTTGA 58.546 45.000 0.00 0.00 0.00 3.02
2037 9354 1.013596 TTGTGCGTGTTGTCCTTGAG 58.986 50.000 0.00 0.00 0.00 3.02
2038 9355 1.279840 GTGCGTGTTGTCCTTGAGC 59.720 57.895 0.00 0.00 0.00 4.26
2039 9356 1.891919 TGCGTGTTGTCCTTGAGCC 60.892 57.895 0.00 0.00 0.00 4.70
2040 9357 1.891919 GCGTGTTGTCCTTGAGCCA 60.892 57.895 0.00 0.00 0.00 4.75
2041 9358 1.444119 GCGTGTTGTCCTTGAGCCAA 61.444 55.000 0.00 0.00 0.00 4.52
2061 9389 1.003476 TGGCAATGCTGAAGCTCGA 60.003 52.632 4.82 0.00 42.66 4.04
2104 9440 7.237920 TGATTGACGAATACATGAGTTGATG 57.762 36.000 0.00 0.00 0.00 3.07
2105 9441 6.818142 TGATTGACGAATACATGAGTTGATGT 59.182 34.615 0.00 0.00 39.87 3.06
2107 9443 4.869861 TGACGAATACATGAGTTGATGTGG 59.130 41.667 0.00 0.00 37.16 4.17
2112 9448 2.503331 ACATGAGTTGATGTGGCGAAA 58.497 42.857 0.00 0.00 35.17 3.46
2136 9472 4.023193 GTCAATTTCGGCCCATCGATATTT 60.023 41.667 0.00 0.00 38.22 1.40
2137 9473 4.215399 TCAATTTCGGCCCATCGATATTTC 59.785 41.667 0.00 0.00 38.22 2.17
2138 9474 2.920724 TTCGGCCCATCGATATTTCA 57.079 45.000 0.00 0.00 39.03 2.69
2139 9475 2.163818 TCGGCCCATCGATATTTCAC 57.836 50.000 0.00 0.00 33.92 3.18
2140 9476 0.790207 CGGCCCATCGATATTTCACG 59.210 55.000 0.00 0.00 0.00 4.35
2143 9479 3.074412 GGCCCATCGATATTTCACGAAT 58.926 45.455 0.00 0.00 41.65 3.34
2145 9481 4.023193 GGCCCATCGATATTTCACGAATTT 60.023 41.667 0.00 0.00 41.65 1.82
2146 9482 4.911610 GCCCATCGATATTTCACGAATTTG 59.088 41.667 0.00 0.00 41.65 2.32
2147 9483 5.505654 GCCCATCGATATTTCACGAATTTGT 60.506 40.000 0.00 0.00 41.65 2.83
2148 9484 6.494842 CCCATCGATATTTCACGAATTTGTT 58.505 36.000 0.00 0.00 41.65 2.83
2149 9485 6.632834 CCCATCGATATTTCACGAATTTGTTC 59.367 38.462 0.00 0.00 41.65 3.18
2150 9486 7.186128 CCATCGATATTTCACGAATTTGTTCA 58.814 34.615 0.00 0.00 41.65 3.18
2151 9487 7.696035 CCATCGATATTTCACGAATTTGTTCAA 59.304 33.333 0.00 0.00 41.65 2.69
2152 9488 8.727733 CATCGATATTTCACGAATTTGTTCAAG 58.272 33.333 0.00 0.00 41.65 3.02
2154 9490 6.021468 CGATATTTCACGAATTTGTTCAAGCC 60.021 38.462 0.00 0.00 0.00 4.35
2155 9491 4.377839 TTTCACGAATTTGTTCAAGCCA 57.622 36.364 0.00 0.00 0.00 4.75
2156 9492 4.377839 TTCACGAATTTGTTCAAGCCAA 57.622 36.364 0.00 0.00 0.00 4.52
2157 9493 3.701241 TCACGAATTTGTTCAAGCCAAC 58.299 40.909 0.00 0.00 0.00 3.77
2159 9495 3.242712 CACGAATTTGTTCAAGCCAACAC 59.757 43.478 0.00 0.00 35.97 3.32
2160 9496 3.119316 ACGAATTTGTTCAAGCCAACACA 60.119 39.130 0.00 0.00 35.97 3.72
2161 9497 3.242712 CGAATTTGTTCAAGCCAACACAC 59.757 43.478 0.00 0.00 35.97 3.82
2162 9498 3.883830 ATTTGTTCAAGCCAACACACA 57.116 38.095 0.00 0.00 35.97 3.72
2163 9499 3.883830 TTTGTTCAAGCCAACACACAT 57.116 38.095 0.00 0.00 35.97 3.21
2165 9501 1.333308 TGTTCAAGCCAACACACATCG 59.667 47.619 0.00 0.00 31.08 3.84
2178 10852 5.452078 ACACACATCGAAACAAATTGGAT 57.548 34.783 0.00 0.00 36.98 3.41
2179 10853 5.841810 ACACACATCGAAACAAATTGGATT 58.158 33.333 0.00 0.00 34.62 3.01
2181 10855 4.685628 ACACATCGAAACAAATTGGATTGC 59.314 37.500 0.00 0.00 34.62 3.56
2183 10857 5.406175 CACATCGAAACAAATTGGATTGCTT 59.594 36.000 0.00 0.00 34.62 3.91
2184 10858 6.585702 CACATCGAAACAAATTGGATTGCTTA 59.414 34.615 0.00 0.00 34.62 3.09
2187 10861 7.441890 TCGAAACAAATTGGATTGCTTACTA 57.558 32.000 0.00 0.00 33.52 1.82
2188 10862 8.050778 TCGAAACAAATTGGATTGCTTACTAT 57.949 30.769 0.00 0.00 33.52 2.12
2198 10885 6.883744 TGGATTGCTTACTATATGTGTCACA 58.116 36.000 8.40 8.40 0.00 3.58
2205 10892 6.986817 GCTTACTATATGTGTCACATGGTTCT 59.013 38.462 25.63 4.34 39.53 3.01
2207 10894 9.684448 CTTACTATATGTGTCACATGGTTCTAG 57.316 37.037 25.63 18.38 39.53 2.43
2219 10906 4.225042 ACATGGTTCTAGCCAACACATCTA 59.775 41.667 0.00 0.00 42.48 1.98
2222 10910 3.369471 GGTTCTAGCCAACACATCTAGCA 60.369 47.826 0.00 0.00 32.10 3.49
2250 11002 9.430838 CAATCTCGCTAGTCTTTCATAAATTTG 57.569 33.333 0.00 0.00 0.00 2.32
2256 11008 5.897377 AGTCTTTCATAAATTTGGGACCG 57.103 39.130 0.00 0.00 0.00 4.79
2283 11035 1.810151 CCGACGAACATTTGTTGGGAT 59.190 47.619 9.70 0.00 40.92 3.85
2284 11036 3.004171 CCGACGAACATTTGTTGGGATA 58.996 45.455 9.70 0.00 40.92 2.59
2286 11038 4.436852 CCGACGAACATTTGTTGGGATAAG 60.437 45.833 9.70 0.00 40.92 1.73
2346 11098 9.750125 AGTTGTATGAGGTTGAAAATTTTCTTC 57.250 29.630 26.73 19.48 38.02 2.87
2347 11099 8.690840 GTTGTATGAGGTTGAAAATTTTCTTCG 58.309 33.333 26.73 0.00 38.02 3.79
2350 11102 6.458232 TGAGGTTGAAAATTTTCTTCGGAA 57.542 33.333 26.73 12.93 38.02 4.30
2351 11103 7.049799 TGAGGTTGAAAATTTTCTTCGGAAT 57.950 32.000 26.73 10.20 38.02 3.01
2352 11104 6.922957 TGAGGTTGAAAATTTTCTTCGGAATG 59.077 34.615 26.73 0.00 38.02 2.67
2355 11107 6.147656 GGTTGAAAATTTTCTTCGGAATGCAT 59.852 34.615 26.73 0.00 38.02 3.96
2356 11108 6.709145 TGAAAATTTTCTTCGGAATGCATG 57.291 33.333 26.73 0.00 38.02 4.06
2357 11109 5.120519 TGAAAATTTTCTTCGGAATGCATGC 59.879 36.000 26.73 11.82 38.02 4.06
2358 11110 2.652941 TTTTCTTCGGAATGCATGCC 57.347 45.000 14.54 14.54 33.58 4.40
2359 11111 1.543607 TTTCTTCGGAATGCATGCCA 58.456 45.000 24.06 8.09 33.58 4.92
2360 11112 1.766494 TTCTTCGGAATGCATGCCAT 58.234 45.000 24.06 3.16 35.06 4.40
2361 11113 1.766494 TCTTCGGAATGCATGCCATT 58.234 45.000 24.06 14.49 46.57 3.16
2362 11114 2.101783 TCTTCGGAATGCATGCCATTT 58.898 42.857 24.06 6.27 44.02 2.32
2364 11116 3.055963 TCTTCGGAATGCATGCCATTTTT 60.056 39.130 24.06 0.83 44.02 1.94
2451 11203 5.412526 AAAGAAAACGTTCGCTTGACATA 57.587 34.783 14.06 0.00 38.90 2.29
2458 11210 2.159366 CGTTCGCTTGACATACTCTCCT 60.159 50.000 0.00 0.00 0.00 3.69
2471 11223 5.886474 ACATACTCTCCTAGTTGATGTTCGA 59.114 40.000 0.00 0.00 34.94 3.71
2475 11227 3.119459 TCTCCTAGTTGATGTTCGACAGC 60.119 47.826 0.00 0.00 33.17 4.40
2485 11237 6.741992 TGATGTTCGACAGCTATCATTTTT 57.258 33.333 0.00 0.00 35.18 1.94
2486 11238 6.545508 TGATGTTCGACAGCTATCATTTTTG 58.454 36.000 0.00 0.00 35.18 2.44
2495 11247 7.326789 CGACAGCTATCATTTTTGTGAATTTGT 59.673 33.333 0.00 0.00 0.00 2.83
2498 11250 9.844790 CAGCTATCATTTTTGTGAATTTGTAGA 57.155 29.630 0.00 0.00 0.00 2.59
2534 11286 4.503734 ACAATTGTTTCGTGCTCACAAATG 59.496 37.500 4.92 4.77 37.35 2.32
2545 11297 2.096496 GCTCACAAATGGATGAACCTCG 59.904 50.000 0.00 0.00 39.86 4.63
2546 11298 2.679837 CTCACAAATGGATGAACCTCGG 59.320 50.000 0.00 0.00 39.86 4.63
2547 11299 1.745087 CACAAATGGATGAACCTCGGG 59.255 52.381 0.00 0.00 39.86 5.14
2548 11300 1.354368 ACAAATGGATGAACCTCGGGT 59.646 47.619 0.00 0.00 39.86 5.28
2549 11301 2.574369 ACAAATGGATGAACCTCGGGTA 59.426 45.455 0.00 0.00 39.86 3.69
2550 11302 3.206150 CAAATGGATGAACCTCGGGTAG 58.794 50.000 0.00 0.00 39.86 3.18
2560 11312 1.218316 CTCGGGTAGGAAGTGTGGC 59.782 63.158 0.00 0.00 0.00 5.01
2561 11313 1.229082 TCGGGTAGGAAGTGTGGCT 60.229 57.895 0.00 0.00 0.00 4.75
2562 11314 0.834687 TCGGGTAGGAAGTGTGGCTT 60.835 55.000 0.00 0.00 40.76 4.35
2563 11315 0.673644 CGGGTAGGAAGTGTGGCTTG 60.674 60.000 0.00 0.00 37.59 4.01
2564 11316 0.960861 GGGTAGGAAGTGTGGCTTGC 60.961 60.000 0.00 0.00 44.59 4.01
2565 11317 0.250727 GGTAGGAAGTGTGGCTTGCA 60.251 55.000 1.71 0.00 46.35 4.08
2566 11318 1.160137 GTAGGAAGTGTGGCTTGCAG 58.840 55.000 1.71 0.00 46.35 4.41
2581 11333 2.275380 GCAGGGGTGCGGTCATTTT 61.275 57.895 0.00 0.00 0.00 1.82
2588 11340 0.671251 GTGCGGTCATTTTCAACCCA 59.329 50.000 0.00 0.00 31.49 4.51
2637 11389 5.831702 AAGCAGAACATCAAATGAGATCC 57.168 39.130 0.00 0.00 0.00 3.36
2638 11390 4.851843 AGCAGAACATCAAATGAGATCCA 58.148 39.130 0.00 0.00 0.00 3.41
2648 11400 8.274322 ACATCAAATGAGATCCAAGTATAACCA 58.726 33.333 0.00 0.00 0.00 3.67
2649 11401 9.293404 CATCAAATGAGATCCAAGTATAACCAT 57.707 33.333 0.00 0.00 0.00 3.55
2675 11427 8.185003 TCATTAAGTGTCATTACAAGACGATG 57.815 34.615 0.00 0.00 37.36 3.84
2684 11436 7.817478 TGTCATTACAAGACGATGATAAACAGT 59.183 33.333 0.00 0.00 38.83 3.55
2704 11456 8.821147 AACAGTAGTAATCGATAACAACAACA 57.179 30.769 0.00 0.00 0.00 3.33
2705 11457 8.821147 ACAGTAGTAATCGATAACAACAACAA 57.179 30.769 0.00 0.00 0.00 2.83
2706 11458 8.706035 ACAGTAGTAATCGATAACAACAACAAC 58.294 33.333 0.00 0.00 0.00 3.32
2707 11459 8.705134 CAGTAGTAATCGATAACAACAACAACA 58.295 33.333 0.00 0.00 0.00 3.33
2708 11460 9.263538 AGTAGTAATCGATAACAACAACAACAA 57.736 29.630 0.00 0.00 0.00 2.83
2709 11461 9.309796 GTAGTAATCGATAACAACAACAACAAC 57.690 33.333 0.00 0.00 0.00 3.32
2710 11462 7.921787 AGTAATCGATAACAACAACAACAACA 58.078 30.769 0.00 0.00 0.00 3.33
2711 11463 8.067784 AGTAATCGATAACAACAACAACAACAG 58.932 33.333 0.00 0.00 0.00 3.16
2712 11464 5.804692 TCGATAACAACAACAACAACAGT 57.195 34.783 0.00 0.00 0.00 3.55
2713 11465 6.905544 TCGATAACAACAACAACAACAGTA 57.094 33.333 0.00 0.00 0.00 2.74
2714 11466 6.939627 TCGATAACAACAACAACAACAGTAG 58.060 36.000 0.00 0.00 0.00 2.57
2715 11467 6.535865 TCGATAACAACAACAACAACAGTAGT 59.464 34.615 0.00 0.00 0.00 2.73
2734 11486 9.251440 ACAGTAGTAATACATAAGAGGTCACAA 57.749 33.333 2.81 0.00 0.00 3.33
2744 11496 1.893137 AGAGGTCACAAGTGCACGATA 59.107 47.619 12.01 0.00 0.00 2.92
2771 11524 9.708222 GATCATTTTAAGTACACACATGATGAC 57.292 33.333 0.00 0.00 31.53 3.06
2783 11536 5.521372 CACACATGATGACATTACATCGACT 59.479 40.000 0.00 0.00 46.49 4.18
2805 11558 5.301298 ACTGTTCTTTAGTTCAGTCGGTAGT 59.699 40.000 0.00 0.00 36.59 2.73
2808 11561 6.488006 TGTTCTTTAGTTCAGTCGGTAGTAGT 59.512 38.462 0.00 0.00 0.00 2.73
2809 11562 6.734104 TCTTTAGTTCAGTCGGTAGTAGTC 57.266 41.667 0.00 0.00 0.00 2.59
2810 11563 6.471146 TCTTTAGTTCAGTCGGTAGTAGTCT 58.529 40.000 0.00 0.00 0.00 3.24
2811 11564 7.615403 TCTTTAGTTCAGTCGGTAGTAGTCTA 58.385 38.462 0.00 0.00 0.00 2.59
2812 11565 7.763528 TCTTTAGTTCAGTCGGTAGTAGTCTAG 59.236 40.741 0.00 0.00 0.00 2.43
2814 11567 6.537453 AGTTCAGTCGGTAGTAGTCTAGTA 57.463 41.667 0.00 0.00 0.00 1.82
2815 11568 6.572519 AGTTCAGTCGGTAGTAGTCTAGTAG 58.427 44.000 0.00 0.00 0.00 2.57
2816 11569 6.379703 AGTTCAGTCGGTAGTAGTCTAGTAGA 59.620 42.308 0.00 0.00 0.00 2.59
2817 11570 6.975196 TCAGTCGGTAGTAGTCTAGTAGAT 57.025 41.667 2.51 0.00 0.00 1.98
2818 11571 8.356657 GTTCAGTCGGTAGTAGTCTAGTAGATA 58.643 40.741 2.51 0.00 0.00 1.98
2819 11572 8.109705 TCAGTCGGTAGTAGTCTAGTAGATAG 57.890 42.308 2.51 0.00 0.00 2.08
2820 11573 6.808212 CAGTCGGTAGTAGTCTAGTAGATAGC 59.192 46.154 2.51 0.83 0.00 2.97
2821 11574 6.493115 AGTCGGTAGTAGTCTAGTAGATAGCA 59.507 42.308 2.51 0.00 0.00 3.49
2824 11577 9.029368 TCGGTAGTAGTCTAGTAGATAGCATAA 57.971 37.037 2.51 0.00 0.00 1.90
2900 11653 7.185565 AGCATAGAGGTAGGATACACACATAT 58.814 38.462 0.00 0.00 45.43 1.78
2925 11678 4.368067 AGACTACAATAGGCAAGGGGTAA 58.632 43.478 0.00 0.00 35.81 2.85
2931 11684 2.337359 TAGGCAAGGGGTAACAGTCT 57.663 50.000 0.00 0.00 39.74 3.24
2932 11685 1.446016 AGGCAAGGGGTAACAGTCTT 58.554 50.000 0.00 0.00 39.74 3.01
2952 11705 6.258230 TCTTATGCAGACAAATTTCACTGG 57.742 37.500 17.33 5.98 0.00 4.00
2964 11717 3.281727 TTTCACTGGCTGATATGGTCC 57.718 47.619 0.00 0.00 0.00 4.46
2973 11726 3.235200 GCTGATATGGTCCAGGTAGAGT 58.765 50.000 0.00 0.00 0.00 3.24
3002 11755 2.649190 TGTACAATACGGGCAATGCAT 58.351 42.857 7.79 0.00 0.00 3.96
3050 11803 3.543494 CGATAAACCAAAAGCGCTTCATG 59.457 43.478 25.24 23.47 0.00 3.07
3055 11808 0.241749 CAAAAGCGCTTCATGCTCCA 59.758 50.000 25.24 0.00 43.14 3.86
3063 11816 1.901591 CTTCATGCTCCACTTGTGGT 58.098 50.000 18.05 0.00 0.00 4.16
3067 11820 2.165167 CATGCTCCACTTGTGGTTGAT 58.835 47.619 18.05 6.94 0.00 2.57
3068 11821 2.363306 TGCTCCACTTGTGGTTGATT 57.637 45.000 18.05 0.00 0.00 2.57
3069 11822 2.229792 TGCTCCACTTGTGGTTGATTC 58.770 47.619 18.05 4.82 0.00 2.52
3070 11823 2.229792 GCTCCACTTGTGGTTGATTCA 58.770 47.619 18.05 0.00 0.00 2.57
3071 11824 2.622942 GCTCCACTTGTGGTTGATTCAA 59.377 45.455 18.05 0.00 0.00 2.69
3072 11825 3.550842 GCTCCACTTGTGGTTGATTCAAC 60.551 47.826 19.17 19.17 42.89 3.18
3073 11826 3.625853 TCCACTTGTGGTTGATTCAACA 58.374 40.909 26.27 12.88 45.11 3.33
3074 11827 4.019858 TCCACTTGTGGTTGATTCAACAA 58.980 39.130 26.27 16.05 45.11 2.83
3075 11828 4.097741 TCCACTTGTGGTTGATTCAACAAG 59.902 41.667 26.27 23.11 45.11 3.16
3076 11829 3.798337 CACTTGTGGTTGATTCAACAAGC 59.202 43.478 26.27 16.96 45.11 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.625790 CCCCAAACGGATCTGTCAAAAA 59.374 45.455 7.86 0.00 0.00 1.94
34 35 2.235016 CCCCAAACGGATCTGTCAAAA 58.765 47.619 7.86 0.00 0.00 2.44
35 36 1.546773 CCCCCAAACGGATCTGTCAAA 60.547 52.381 7.86 0.00 0.00 2.69
36 37 0.037590 CCCCCAAACGGATCTGTCAA 59.962 55.000 7.86 0.00 0.00 3.18
37 38 1.682849 CCCCCAAACGGATCTGTCA 59.317 57.895 7.86 0.00 0.00 3.58
38 39 4.637771 CCCCCAAACGGATCTGTC 57.362 61.111 7.86 0.00 0.00 3.51
61 62 0.867753 GACGCGGACTAGCACAGATG 60.868 60.000 12.47 0.00 36.85 2.90
62 63 1.433879 GACGCGGACTAGCACAGAT 59.566 57.895 12.47 0.00 36.85 2.90
63 64 2.875485 GACGCGGACTAGCACAGA 59.125 61.111 12.47 0.00 36.85 3.41
64 65 2.577112 CGACGCGGACTAGCACAG 60.577 66.667 12.47 0.00 36.85 3.66
75 76 4.741781 CTTTTGCAGGCCGACGCG 62.742 66.667 3.53 3.53 35.02 6.01
76 77 3.660111 ACTTTTGCAGGCCGACGC 61.660 61.111 7.79 7.79 0.00 5.19
77 78 2.252260 CACTTTTGCAGGCCGACG 59.748 61.111 0.00 0.00 0.00 5.12
78 79 1.734388 AACCACTTTTGCAGGCCGAC 61.734 55.000 0.00 0.00 0.00 4.79
79 80 1.040339 AAACCACTTTTGCAGGCCGA 61.040 50.000 0.00 0.00 0.00 5.54
80 81 0.179086 AAAACCACTTTTGCAGGCCG 60.179 50.000 0.00 0.00 0.00 6.13
81 82 1.298602 CAAAACCACTTTTGCAGGCC 58.701 50.000 0.00 0.00 39.82 5.19
87 88 1.006494 GTTCGCGCAAAACCACTTTTG 60.006 47.619 8.75 2.20 46.30 2.44
88 89 1.135228 AGTTCGCGCAAAACCACTTTT 60.135 42.857 16.51 0.00 0.00 2.27
89 90 0.454196 AGTTCGCGCAAAACCACTTT 59.546 45.000 16.51 0.00 0.00 2.66
90 91 0.248458 CAGTTCGCGCAAAACCACTT 60.248 50.000 16.51 0.00 0.00 3.16
91 92 1.355210 CAGTTCGCGCAAAACCACT 59.645 52.632 16.51 2.34 0.00 4.00
92 93 2.292916 GCAGTTCGCGCAAAACCAC 61.293 57.895 16.51 7.61 0.00 4.16
93 94 2.025441 GCAGTTCGCGCAAAACCA 59.975 55.556 16.51 0.00 0.00 3.67
94 95 1.587613 TTGCAGTTCGCGCAAAACC 60.588 52.632 16.51 5.74 45.91 3.27
95 96 3.990141 TTGCAGTTCGCGCAAAAC 58.010 50.000 8.75 11.52 45.91 2.43
99 100 1.207339 CTCATTTGCAGTTCGCGCA 59.793 52.632 8.75 0.00 46.97 6.09
100 101 0.385974 AACTCATTTGCAGTTCGCGC 60.386 50.000 0.00 0.00 46.97 6.86
101 102 2.036556 AAACTCATTTGCAGTTCGCG 57.963 45.000 0.00 0.00 46.97 5.87
102 103 3.758521 CAAAACTCATTTGCAGTTCGC 57.241 42.857 0.00 0.00 41.79 4.70
111 112 1.288752 CGGCCCGCAAAACTCATTT 59.711 52.632 0.00 0.00 0.00 2.32
112 113 2.635443 CCGGCCCGCAAAACTCATT 61.635 57.895 0.00 0.00 0.00 2.57
113 114 3.061848 CCGGCCCGCAAAACTCAT 61.062 61.111 0.00 0.00 0.00 2.90
132 133 3.161450 TAGCAGACCCCGCATCCC 61.161 66.667 0.00 0.00 0.00 3.85
133 134 2.093537 CTCTAGCAGACCCCGCATCC 62.094 65.000 0.00 0.00 0.00 3.51
134 135 1.365633 CTCTAGCAGACCCCGCATC 59.634 63.158 0.00 0.00 0.00 3.91
135 136 0.978146 AACTCTAGCAGACCCCGCAT 60.978 55.000 0.00 0.00 0.00 4.73
136 137 1.609501 AACTCTAGCAGACCCCGCA 60.610 57.895 0.00 0.00 0.00 5.69
137 138 1.153549 CAACTCTAGCAGACCCCGC 60.154 63.158 0.00 0.00 0.00 6.13
138 139 1.153549 GCAACTCTAGCAGACCCCG 60.154 63.158 0.00 0.00 0.00 5.73
139 140 0.176910 GAGCAACTCTAGCAGACCCC 59.823 60.000 0.00 0.00 0.00 4.95
140 141 1.190643 AGAGCAACTCTAGCAGACCC 58.809 55.000 0.00 0.00 39.28 4.46
141 142 3.193691 TGTTAGAGCAACTCTAGCAGACC 59.806 47.826 14.73 0.00 44.88 3.85
142 143 4.442375 TGTTAGAGCAACTCTAGCAGAC 57.558 45.455 14.73 7.03 44.88 3.51
145 146 3.056536 CAGGTGTTAGAGCAACTCTAGCA 60.057 47.826 14.73 14.73 46.55 3.49
146 147 3.193691 TCAGGTGTTAGAGCAACTCTAGC 59.806 47.826 10.50 10.50 42.92 3.42
147 148 5.347342 CATCAGGTGTTAGAGCAACTCTAG 58.653 45.833 4.64 0.00 42.92 2.43
148 149 4.382040 GCATCAGGTGTTAGAGCAACTCTA 60.382 45.833 0.16 0.16 41.50 2.43
149 150 3.618507 GCATCAGGTGTTAGAGCAACTCT 60.619 47.826 2.23 2.23 43.83 3.24
150 151 2.675348 GCATCAGGTGTTAGAGCAACTC 59.325 50.000 0.00 0.00 33.52 3.01
151 152 2.038952 TGCATCAGGTGTTAGAGCAACT 59.961 45.455 0.00 0.00 36.76 3.16
152 153 2.417933 CTGCATCAGGTGTTAGAGCAAC 59.582 50.000 0.00 0.00 37.67 4.17
153 154 2.302733 TCTGCATCAGGTGTTAGAGCAA 59.697 45.455 0.00 0.00 31.51 3.91
154 155 1.901833 TCTGCATCAGGTGTTAGAGCA 59.098 47.619 0.00 0.00 31.51 4.26
155 156 2.275318 GTCTGCATCAGGTGTTAGAGC 58.725 52.381 0.00 0.00 31.51 4.09
156 157 3.599730 TGTCTGCATCAGGTGTTAGAG 57.400 47.619 0.00 0.00 31.51 2.43
157 158 3.557054 GGTTGTCTGCATCAGGTGTTAGA 60.557 47.826 0.00 0.00 31.51 2.10
158 159 2.744202 GGTTGTCTGCATCAGGTGTTAG 59.256 50.000 0.00 0.00 31.51 2.34
159 160 2.552155 GGGTTGTCTGCATCAGGTGTTA 60.552 50.000 0.00 0.00 31.51 2.41
160 161 1.609208 GGTTGTCTGCATCAGGTGTT 58.391 50.000 0.00 0.00 31.51 3.32
161 162 0.250901 GGGTTGTCTGCATCAGGTGT 60.251 55.000 0.00 0.00 31.51 4.16
162 163 0.250858 TGGGTTGTCTGCATCAGGTG 60.251 55.000 0.00 0.00 31.51 4.00
163 164 0.478072 TTGGGTTGTCTGCATCAGGT 59.522 50.000 0.00 0.00 31.51 4.00
164 165 0.883833 GTTGGGTTGTCTGCATCAGG 59.116 55.000 0.00 0.00 31.51 3.86
165 166 1.538512 CAGTTGGGTTGTCTGCATCAG 59.461 52.381 0.00 0.00 0.00 2.90
166 167 1.608055 CAGTTGGGTTGTCTGCATCA 58.392 50.000 0.00 0.00 0.00 3.07
167 168 0.883833 CCAGTTGGGTTGTCTGCATC 59.116 55.000 0.00 0.00 0.00 3.91
168 169 3.040965 CCAGTTGGGTTGTCTGCAT 57.959 52.632 0.00 0.00 0.00 3.96
169 170 4.577152 CCAGTTGGGTTGTCTGCA 57.423 55.556 0.00 0.00 0.00 4.41
179 180 2.198827 TGTATGCTTGTCCCAGTTGG 57.801 50.000 0.00 0.00 0.00 3.77
180 181 4.582701 TTTTGTATGCTTGTCCCAGTTG 57.417 40.909 0.00 0.00 0.00 3.16
181 182 4.561326 GCATTTTGTATGCTTGTCCCAGTT 60.561 41.667 2.64 0.00 41.52 3.16
182 183 3.056607 GCATTTTGTATGCTTGTCCCAGT 60.057 43.478 2.64 0.00 41.52 4.00
183 184 3.514645 GCATTTTGTATGCTTGTCCCAG 58.485 45.455 2.64 0.00 41.52 4.45
184 185 3.591196 GCATTTTGTATGCTTGTCCCA 57.409 42.857 2.64 0.00 41.52 4.37
192 193 8.519492 TCTTTGTTTTAGAGCATTTTGTATGC 57.481 30.769 1.61 1.61 44.85 3.14
195 196 9.462174 CACATCTTTGTTTTAGAGCATTTTGTA 57.538 29.630 0.00 0.00 32.34 2.41
196 197 8.196771 TCACATCTTTGTTTTAGAGCATTTTGT 58.803 29.630 0.00 0.00 32.34 2.83
197 198 8.578308 TCACATCTTTGTTTTAGAGCATTTTG 57.422 30.769 0.00 0.00 32.34 2.44
198 199 9.034544 GTTCACATCTTTGTTTTAGAGCATTTT 57.965 29.630 0.00 0.00 32.34 1.82
199 200 7.653311 GGTTCACATCTTTGTTTTAGAGCATTT 59.347 33.333 0.00 0.00 32.34 2.32
200 201 7.147976 GGTTCACATCTTTGTTTTAGAGCATT 58.852 34.615 0.00 0.00 32.34 3.56
201 202 6.265196 TGGTTCACATCTTTGTTTTAGAGCAT 59.735 34.615 0.00 0.00 32.34 3.79
202 203 5.592282 TGGTTCACATCTTTGTTTTAGAGCA 59.408 36.000 0.00 0.00 32.34 4.26
203 204 6.072112 TGGTTCACATCTTTGTTTTAGAGC 57.928 37.500 0.00 0.00 32.34 4.09
204 205 7.165812 CGTTTGGTTCACATCTTTGTTTTAGAG 59.834 37.037 0.00 0.00 32.34 2.43
205 206 6.970043 CGTTTGGTTCACATCTTTGTTTTAGA 59.030 34.615 0.00 0.00 32.34 2.10
206 207 6.291585 GCGTTTGGTTCACATCTTTGTTTTAG 60.292 38.462 0.00 0.00 32.34 1.85
207 208 5.517054 GCGTTTGGTTCACATCTTTGTTTTA 59.483 36.000 0.00 0.00 32.34 1.52
208 209 4.328712 GCGTTTGGTTCACATCTTTGTTTT 59.671 37.500 0.00 0.00 32.34 2.43
209 210 3.862845 GCGTTTGGTTCACATCTTTGTTT 59.137 39.130 0.00 0.00 32.34 2.83
210 211 3.119316 TGCGTTTGGTTCACATCTTTGTT 60.119 39.130 0.00 0.00 32.34 2.83
211 212 2.425312 TGCGTTTGGTTCACATCTTTGT 59.575 40.909 0.00 0.00 36.15 2.83
212 213 3.077229 TGCGTTTGGTTCACATCTTTG 57.923 42.857 0.00 0.00 0.00 2.77
213 214 3.305335 GGATGCGTTTGGTTCACATCTTT 60.305 43.478 0.00 0.00 37.77 2.52
214 215 2.228822 GGATGCGTTTGGTTCACATCTT 59.771 45.455 0.00 0.00 37.77 2.40
215 216 1.812571 GGATGCGTTTGGTTCACATCT 59.187 47.619 0.00 0.00 37.77 2.90
216 217 1.465689 CGGATGCGTTTGGTTCACATC 60.466 52.381 0.00 0.00 37.09 3.06
217 218 0.521291 CGGATGCGTTTGGTTCACAT 59.479 50.000 0.00 0.00 0.00 3.21
218 219 0.816018 ACGGATGCGTTTGGTTCACA 60.816 50.000 6.39 0.00 0.00 3.58
219 220 0.385473 CACGGATGCGTTTGGTTCAC 60.385 55.000 10.46 0.00 0.00 3.18
220 221 1.511318 CCACGGATGCGTTTGGTTCA 61.511 55.000 10.46 0.00 0.00 3.18
221 222 1.209127 CCACGGATGCGTTTGGTTC 59.791 57.895 10.46 0.00 0.00 3.62
222 223 0.250381 TACCACGGATGCGTTTGGTT 60.250 50.000 23.39 10.60 42.50 3.67
223 224 0.035820 ATACCACGGATGCGTTTGGT 60.036 50.000 22.20 22.20 44.69 3.67
224 225 0.655733 GATACCACGGATGCGTTTGG 59.344 55.000 10.46 12.37 35.06 3.28
225 226 1.327460 CAGATACCACGGATGCGTTTG 59.673 52.381 10.46 7.04 0.00 2.93
226 227 1.651987 CAGATACCACGGATGCGTTT 58.348 50.000 10.46 2.27 0.00 3.60
227 228 0.810031 GCAGATACCACGGATGCGTT 60.810 55.000 10.46 0.00 0.00 4.84
228 229 1.227263 GCAGATACCACGGATGCGT 60.227 57.895 6.39 6.39 0.00 5.24
229 230 3.630204 GCAGATACCACGGATGCG 58.370 61.111 4.58 4.58 0.00 4.73
230 231 0.810031 AACGCAGATACCACGGATGC 60.810 55.000 0.00 0.00 0.00 3.91
231 232 1.209128 GAACGCAGATACCACGGATG 58.791 55.000 0.00 0.00 0.00 3.51
232 233 0.821517 TGAACGCAGATACCACGGAT 59.178 50.000 0.00 0.00 0.00 4.18
233 234 0.604073 TTGAACGCAGATACCACGGA 59.396 50.000 0.00 0.00 0.00 4.69
234 235 1.393539 CTTTGAACGCAGATACCACGG 59.606 52.381 0.00 0.00 0.00 4.94
235 236 1.201921 GCTTTGAACGCAGATACCACG 60.202 52.381 0.00 0.00 0.00 4.94
236 237 2.076863 AGCTTTGAACGCAGATACCAC 58.923 47.619 0.00 0.00 0.00 4.16
237 238 2.028112 AGAGCTTTGAACGCAGATACCA 60.028 45.455 0.00 0.00 0.00 3.25
238 239 2.605366 GAGAGCTTTGAACGCAGATACC 59.395 50.000 0.00 0.00 0.00 2.73
239 240 2.280183 CGAGAGCTTTGAACGCAGATAC 59.720 50.000 0.00 0.00 0.00 2.24
240 241 2.094700 ACGAGAGCTTTGAACGCAGATA 60.095 45.455 0.00 0.00 0.00 1.98
241 242 1.337260 ACGAGAGCTTTGAACGCAGAT 60.337 47.619 0.00 0.00 0.00 2.90
242 243 0.032130 ACGAGAGCTTTGAACGCAGA 59.968 50.000 0.00 0.00 0.00 4.26
243 244 1.387084 GTACGAGAGCTTTGAACGCAG 59.613 52.381 0.00 0.00 0.00 5.18
244 245 1.415374 GTACGAGAGCTTTGAACGCA 58.585 50.000 0.00 0.00 0.00 5.24
245 246 0.714439 GGTACGAGAGCTTTGAACGC 59.286 55.000 0.00 0.00 0.00 4.84
246 247 2.060326 TGGTACGAGAGCTTTGAACG 57.940 50.000 0.00 0.00 0.00 3.95
247 248 2.930682 GGATGGTACGAGAGCTTTGAAC 59.069 50.000 0.00 0.00 0.00 3.18
248 249 2.416836 CGGATGGTACGAGAGCTTTGAA 60.417 50.000 0.00 0.00 0.00 2.69
249 250 1.134367 CGGATGGTACGAGAGCTTTGA 59.866 52.381 0.00 0.00 0.00 2.69
250 251 1.560923 CGGATGGTACGAGAGCTTTG 58.439 55.000 0.00 0.00 0.00 2.77
251 252 0.179108 GCGGATGGTACGAGAGCTTT 60.179 55.000 0.00 0.00 0.00 3.51
252 253 1.437986 GCGGATGGTACGAGAGCTT 59.562 57.895 0.00 0.00 0.00 3.74
253 254 2.835705 CGCGGATGGTACGAGAGCT 61.836 63.158 0.00 0.00 32.84 4.09
254 255 2.353607 CGCGGATGGTACGAGAGC 60.354 66.667 0.00 0.00 32.84 4.09
255 256 2.353607 GCGCGGATGGTACGAGAG 60.354 66.667 8.83 0.00 32.84 3.20
256 257 2.827190 AGCGCGGATGGTACGAGA 60.827 61.111 8.83 0.00 32.84 4.04
257 258 2.353607 GAGCGCGGATGGTACGAG 60.354 66.667 8.83 0.00 0.00 4.18
258 259 4.246206 CGAGCGCGGATGGTACGA 62.246 66.667 8.83 0.00 0.00 3.43
259 260 3.744749 TTCGAGCGCGGATGGTACG 62.745 63.158 10.69 0.00 38.28 3.67
260 261 1.480219 CTTTCGAGCGCGGATGGTAC 61.480 60.000 10.69 0.00 38.28 3.34
261 262 1.226859 CTTTCGAGCGCGGATGGTA 60.227 57.895 10.69 0.00 38.28 3.25
262 263 1.940883 TACTTTCGAGCGCGGATGGT 61.941 55.000 10.69 6.27 38.28 3.55
263 264 0.597637 ATACTTTCGAGCGCGGATGG 60.598 55.000 10.69 0.00 38.28 3.51
264 265 1.209128 AATACTTTCGAGCGCGGATG 58.791 50.000 10.69 6.21 38.28 3.51
265 266 1.859080 GAAATACTTTCGAGCGCGGAT 59.141 47.619 10.69 0.00 38.28 4.18
266 267 1.274596 GAAATACTTTCGAGCGCGGA 58.725 50.000 10.69 0.00 38.28 5.54
267 268 0.996462 TGAAATACTTTCGAGCGCGG 59.004 50.000 10.69 0.00 42.55 6.46
268 269 2.281498 TCATGAAATACTTTCGAGCGCG 59.719 45.455 2.41 2.41 42.55 6.86
269 270 3.925688 TCATGAAATACTTTCGAGCGC 57.074 42.857 0.00 0.00 42.55 5.92
328 329 4.072088 CACTTTCACGCGCCCGTC 62.072 66.667 5.73 0.00 46.39 4.79
338 341 1.885388 CGTCGTGGTGGCACTTTCA 60.885 57.895 18.45 4.11 0.00 2.69
363 366 1.662686 CCAGGGGAATATCCTCTCCC 58.337 60.000 0.00 1.94 46.81 4.30
364 367 0.988063 GCCAGGGGAATATCCTCTCC 59.012 60.000 0.00 0.00 46.81 3.71
416 419 1.490490 GGCCAGGATTAGTGGATGTGA 59.510 52.381 0.00 0.00 37.23 3.58
417 420 1.212688 TGGCCAGGATTAGTGGATGTG 59.787 52.381 0.00 0.00 37.23 3.21
418 421 1.595311 TGGCCAGGATTAGTGGATGT 58.405 50.000 0.00 0.00 37.23 3.06
419 422 2.965671 ATGGCCAGGATTAGTGGATG 57.034 50.000 13.05 0.00 37.23 3.51
420 423 2.915604 CCTATGGCCAGGATTAGTGGAT 59.084 50.000 13.05 0.00 38.00 3.41
421 424 2.090210 TCCTATGGCCAGGATTAGTGGA 60.090 50.000 13.05 6.65 39.89 4.02
422 425 2.338809 TCCTATGGCCAGGATTAGTGG 58.661 52.381 13.05 4.27 39.89 4.00
423 426 3.808618 GCTTCCTATGGCCAGGATTAGTG 60.809 52.174 13.05 2.71 44.26 2.74
424 427 2.373502 GCTTCCTATGGCCAGGATTAGT 59.626 50.000 13.05 0.00 44.26 2.24
425 428 2.290577 GGCTTCCTATGGCCAGGATTAG 60.291 54.545 13.05 9.82 44.26 1.73
426 429 1.705186 GGCTTCCTATGGCCAGGATTA 59.295 52.381 13.05 0.00 44.26 1.75
427 430 0.480252 GGCTTCCTATGGCCAGGATT 59.520 55.000 13.05 0.00 44.26 3.01
428 431 2.158780 GGCTTCCTATGGCCAGGAT 58.841 57.895 13.05 0.00 44.26 3.24
429 432 3.660724 GGCTTCCTATGGCCAGGA 58.339 61.111 13.05 11.14 46.84 3.86
435 438 1.150081 CTGGCCAGGCTTCCTATGG 59.850 63.158 26.14 0.00 37.15 2.74
436 439 1.150081 CCTGGCCAGGCTTCCTATG 59.850 63.158 38.39 12.24 42.44 2.23
437 440 3.666122 CCTGGCCAGGCTTCCTAT 58.334 61.111 38.39 0.00 42.44 2.57
478 481 3.656045 CGTCGTGCCGGGCTTTTT 61.656 61.111 21.46 0.00 0.00 1.94
509 512 2.814913 AAAATGACGGGTCCGGGCTC 62.815 60.000 5.77 0.00 44.69 4.70
510 513 2.420466 AAAAATGACGGGTCCGGGCT 62.420 55.000 5.77 0.00 44.69 5.19
511 514 1.974875 AAAAATGACGGGTCCGGGC 60.975 57.895 14.25 0.00 44.69 6.13
512 515 1.880186 CAAAAATGACGGGTCCGGG 59.120 57.895 14.25 0.00 44.69 5.73
513 516 1.211709 GCAAAAATGACGGGTCCGG 59.788 57.895 14.25 0.00 44.69 5.14
514 517 0.109781 CTGCAAAAATGACGGGTCCG 60.110 55.000 7.97 7.97 46.03 4.79
515 518 0.958822 ACTGCAAAAATGACGGGTCC 59.041 50.000 0.00 0.00 0.00 4.46
516 519 2.793278 AACTGCAAAAATGACGGGTC 57.207 45.000 0.00 0.00 0.00 4.46
517 520 3.535280 AAAACTGCAAAAATGACGGGT 57.465 38.095 0.00 0.00 0.00 5.28
535 538 1.403687 CCCGGCCCAACCTTCAAAAA 61.404 55.000 0.00 0.00 35.61 1.94
536 539 1.834822 CCCGGCCCAACCTTCAAAA 60.835 57.895 0.00 0.00 35.61 2.44
537 540 2.203567 CCCGGCCCAACCTTCAAA 60.204 61.111 0.00 0.00 35.61 2.69
538 541 4.986708 GCCCGGCCCAACCTTCAA 62.987 66.667 0.00 0.00 35.61 2.69
566 569 2.403252 ACATCTAAAAGCCCGTCAGG 57.597 50.000 0.00 0.00 39.47 3.86
567 570 2.348666 CGAACATCTAAAAGCCCGTCAG 59.651 50.000 0.00 0.00 0.00 3.51
568 571 2.343101 CGAACATCTAAAAGCCCGTCA 58.657 47.619 0.00 0.00 0.00 4.35
569 572 1.664151 CCGAACATCTAAAAGCCCGTC 59.336 52.381 0.00 0.00 0.00 4.79
570 573 1.677820 CCCGAACATCTAAAAGCCCGT 60.678 52.381 0.00 0.00 0.00 5.28
571 574 1.014352 CCCGAACATCTAAAAGCCCG 58.986 55.000 0.00 0.00 0.00 6.13
572 575 0.738975 GCCCGAACATCTAAAAGCCC 59.261 55.000 0.00 0.00 0.00 5.19
573 576 0.738975 GGCCCGAACATCTAAAAGCC 59.261 55.000 0.00 0.00 0.00 4.35
574 577 0.377203 CGGCCCGAACATCTAAAAGC 59.623 55.000 0.00 0.00 0.00 3.51
575 578 1.014352 CCGGCCCGAACATCTAAAAG 58.986 55.000 3.71 0.00 0.00 2.27
576 579 0.393267 CCCGGCCCGAACATCTAAAA 60.393 55.000 3.71 0.00 0.00 1.52
577 580 1.222387 CCCGGCCCGAACATCTAAA 59.778 57.895 3.71 0.00 0.00 1.85
578 581 2.904905 CCCGGCCCGAACATCTAA 59.095 61.111 3.71 0.00 0.00 2.10
579 582 3.857038 GCCCGGCCCGAACATCTA 61.857 66.667 3.71 0.00 0.00 1.98
594 597 0.108585 TGTGTTTCTGGGACTGAGCC 59.891 55.000 0.00 0.00 37.65 4.70
595 598 1.517242 CTGTGTTTCTGGGACTGAGC 58.483 55.000 0.00 0.00 37.65 4.26
596 599 1.879796 GCCTGTGTTTCTGGGACTGAG 60.880 57.143 0.00 0.00 37.65 3.35
597 600 0.108585 GCCTGTGTTTCTGGGACTGA 59.891 55.000 0.00 0.00 35.96 3.41
598 601 0.890996 GGCCTGTGTTTCTGGGACTG 60.891 60.000 0.00 0.00 35.96 3.51
599 602 1.456287 GGCCTGTGTTTCTGGGACT 59.544 57.895 0.00 0.00 35.96 3.85
600 603 1.603739 GGGCCTGTGTTTCTGGGAC 60.604 63.158 0.84 0.00 35.96 4.46
601 604 2.843545 GGGCCTGTGTTTCTGGGA 59.156 61.111 0.84 0.00 35.96 4.37
602 605 2.484287 ATCGGGCCTGTGTTTCTGGG 62.484 60.000 12.43 0.00 35.96 4.45
603 606 1.002134 ATCGGGCCTGTGTTTCTGG 60.002 57.895 12.43 0.00 38.06 3.86
604 607 1.308069 CCATCGGGCCTGTGTTTCTG 61.308 60.000 12.43 1.22 0.00 3.02
605 608 1.002134 CCATCGGGCCTGTGTTTCT 60.002 57.895 12.43 0.00 0.00 2.52
606 609 3.590824 CCATCGGGCCTGTGTTTC 58.409 61.111 12.43 0.00 0.00 2.78
642 645 1.040339 AGCCAAGCCCGACACAAAAA 61.040 50.000 0.00 0.00 0.00 1.94
643 646 0.179015 TAGCCAAGCCCGACACAAAA 60.179 50.000 0.00 0.00 0.00 2.44
644 647 0.605319 CTAGCCAAGCCCGACACAAA 60.605 55.000 0.00 0.00 0.00 2.83
645 648 1.003839 CTAGCCAAGCCCGACACAA 60.004 57.895 0.00 0.00 0.00 3.33
646 649 2.662596 CTAGCCAAGCCCGACACA 59.337 61.111 0.00 0.00 0.00 3.72
647 650 2.125106 CCTAGCCAAGCCCGACAC 60.125 66.667 0.00 0.00 0.00 3.67
648 651 4.096003 GCCTAGCCAAGCCCGACA 62.096 66.667 0.00 0.00 0.00 4.35
675 678 2.270874 ATAGCTGGCCAAACCTCGGG 62.271 60.000 7.01 0.00 40.22 5.14
676 679 0.468226 TATAGCTGGCCAAACCTCGG 59.532 55.000 7.01 0.00 40.22 4.63
677 680 1.940613 GTTATAGCTGGCCAAACCTCG 59.059 52.381 7.01 0.00 40.22 4.63
678 681 1.940613 CGTTATAGCTGGCCAAACCTC 59.059 52.381 7.01 0.00 40.22 3.85
679 682 1.408266 CCGTTATAGCTGGCCAAACCT 60.408 52.381 7.01 6.16 40.22 3.50
680 683 1.021968 CCGTTATAGCTGGCCAAACC 58.978 55.000 7.01 0.00 39.84 3.27
681 684 0.380733 GCCGTTATAGCTGGCCAAAC 59.619 55.000 7.01 7.07 43.06 2.93
682 685 2.788515 GCCGTTATAGCTGGCCAAA 58.211 52.632 7.01 0.00 43.06 3.28
683 686 4.551729 GCCGTTATAGCTGGCCAA 57.448 55.556 7.01 0.00 43.06 4.52
687 690 0.814010 GGTGTGGCCGTTATAGCTGG 60.814 60.000 0.00 0.00 0.00 4.85
688 691 0.107897 TGGTGTGGCCGTTATAGCTG 60.108 55.000 0.00 0.00 41.21 4.24
689 692 0.107848 GTGGTGTGGCCGTTATAGCT 60.108 55.000 0.00 0.00 41.21 3.32
690 693 1.426041 CGTGGTGTGGCCGTTATAGC 61.426 60.000 0.00 0.00 41.21 2.97
691 694 0.173935 TCGTGGTGTGGCCGTTATAG 59.826 55.000 0.00 0.00 41.21 1.31
692 695 0.173935 CTCGTGGTGTGGCCGTTATA 59.826 55.000 0.00 0.00 41.21 0.98
695 698 2.989055 CTTCTCGTGGTGTGGCCGTT 62.989 60.000 0.00 0.00 41.21 4.44
797 800 2.112190 TCAGGTTTGGTTTTGGGTTCC 58.888 47.619 0.00 0.00 0.00 3.62
835 3558 2.237643 TCAGTAATTAGCCGCCCTTTCA 59.762 45.455 0.00 0.00 0.00 2.69
1023 8134 4.897856 GCGTGCGTGTTTGCGGTT 62.898 61.111 0.00 0.00 37.81 4.44
1077 8206 0.801251 CGACGTACGGTCCTTCTTCT 59.199 55.000 21.06 0.00 42.99 2.85
1188 8321 1.153667 CAGGCTGTCGAAGAGCTCC 60.154 63.158 10.93 0.00 36.95 4.70
1201 8334 4.753662 CATGGTGGGCAGCAGGCT 62.754 66.667 1.94 0.00 42.52 4.58
1564 8697 3.075005 GTCGAGCACCTGGCCCTA 61.075 66.667 0.00 0.00 46.50 3.53
1683 8819 2.622629 CGCGGCATCATGAAGTCG 59.377 61.111 19.77 19.77 0.00 4.18
1728 8864 4.021925 AGGCCAGGGTTCTCGCAC 62.022 66.667 5.01 0.00 0.00 5.34
1755 8891 4.394712 CTCCACGGGTGCACCTCC 62.395 72.222 33.91 18.32 36.97 4.30
1910 9046 2.831526 TGGATGGATCAGTTCTTGACGA 59.168 45.455 0.00 0.00 38.99 4.20
1948 9085 4.432980 AGGTATCGGTCCCCAAATTAAG 57.567 45.455 0.00 0.00 0.00 1.85
1961 9098 3.141398 CCATTGGATGACAAGGTATCGG 58.859 50.000 0.00 0.00 43.48 4.18
1974 9115 2.365617 ACTATCGAGTTCGCCATTGGAT 59.634 45.455 6.95 0.00 39.60 3.41
2003 9320 6.370593 ACACGCACAAATTAGTCAAATACTG 58.629 36.000 0.00 0.00 39.39 2.74
2004 9321 6.554334 ACACGCACAAATTAGTCAAATACT 57.446 33.333 0.00 0.00 42.62 2.12
2005 9322 6.635239 ACAACACGCACAAATTAGTCAAATAC 59.365 34.615 0.00 0.00 0.00 1.89
2006 9323 6.730175 ACAACACGCACAAATTAGTCAAATA 58.270 32.000 0.00 0.00 0.00 1.40
2007 9324 5.587289 ACAACACGCACAAATTAGTCAAAT 58.413 33.333 0.00 0.00 0.00 2.32
2008 9325 4.987832 ACAACACGCACAAATTAGTCAAA 58.012 34.783 0.00 0.00 0.00 2.69
2038 9355 0.389426 GCTTCAGCATTGCCAGTTGG 60.389 55.000 4.70 0.00 41.59 3.77
2039 9356 0.601558 AGCTTCAGCATTGCCAGTTG 59.398 50.000 4.70 0.00 45.16 3.16
2040 9357 0.886563 GAGCTTCAGCATTGCCAGTT 59.113 50.000 4.70 0.00 45.16 3.16
2041 9358 1.303799 CGAGCTTCAGCATTGCCAGT 61.304 55.000 4.70 0.00 45.16 4.00
2051 9379 3.583806 GATGGGATACATCGAGCTTCAG 58.416 50.000 0.00 0.00 45.87 3.02
2112 9448 0.251916 TCGATGGGCCGAAATTGACT 59.748 50.000 0.00 0.00 35.42 3.41
2122 9458 2.163818 TCGTGAAATATCGATGGGCC 57.836 50.000 8.54 0.00 0.00 5.80
2126 9462 8.599876 TTGAACAAATTCGTGAAATATCGATG 57.400 30.769 8.54 0.00 37.69 3.84
2136 9472 3.129462 TGTTGGCTTGAACAAATTCGTGA 59.871 39.130 0.00 0.00 37.69 4.35
2137 9473 3.242712 GTGTTGGCTTGAACAAATTCGTG 59.757 43.478 0.00 0.00 37.58 4.35
2138 9474 3.119316 TGTGTTGGCTTGAACAAATTCGT 60.119 39.130 0.00 0.00 37.58 3.85
2139 9475 3.242712 GTGTGTTGGCTTGAACAAATTCG 59.757 43.478 0.00 0.00 37.58 3.34
2140 9476 4.180057 TGTGTGTTGGCTTGAACAAATTC 58.820 39.130 0.00 0.00 37.58 2.17
2143 9479 3.733380 CGATGTGTGTTGGCTTGAACAAA 60.733 43.478 0.00 0.00 37.58 2.83
2145 9481 1.333308 CGATGTGTGTTGGCTTGAACA 59.667 47.619 0.00 0.00 33.36 3.18
2146 9482 1.601903 TCGATGTGTGTTGGCTTGAAC 59.398 47.619 0.00 0.00 0.00 3.18
2147 9483 1.960417 TCGATGTGTGTTGGCTTGAA 58.040 45.000 0.00 0.00 0.00 2.69
2148 9484 1.960417 TTCGATGTGTGTTGGCTTGA 58.040 45.000 0.00 0.00 0.00 3.02
2149 9485 2.223456 TGTTTCGATGTGTGTTGGCTTG 60.223 45.455 0.00 0.00 0.00 4.01
2150 9486 2.020720 TGTTTCGATGTGTGTTGGCTT 58.979 42.857 0.00 0.00 0.00 4.35
2151 9487 1.674359 TGTTTCGATGTGTGTTGGCT 58.326 45.000 0.00 0.00 0.00 4.75
2152 9488 2.483583 TTGTTTCGATGTGTGTTGGC 57.516 45.000 0.00 0.00 0.00 4.52
2154 9490 5.039984 TCCAATTTGTTTCGATGTGTGTTG 58.960 37.500 0.00 0.00 0.00 3.33
2155 9491 5.255710 TCCAATTTGTTTCGATGTGTGTT 57.744 34.783 0.00 0.00 0.00 3.32
2156 9492 4.909696 TCCAATTTGTTTCGATGTGTGT 57.090 36.364 0.00 0.00 0.00 3.72
2157 9493 5.388682 GCAATCCAATTTGTTTCGATGTGTG 60.389 40.000 0.00 0.00 0.00 3.82
2159 9495 4.925054 AGCAATCCAATTTGTTTCGATGTG 59.075 37.500 0.00 0.00 0.00 3.21
2160 9496 5.138125 AGCAATCCAATTTGTTTCGATGT 57.862 34.783 0.00 0.00 0.00 3.06
2161 9497 6.808212 AGTAAGCAATCCAATTTGTTTCGATG 59.192 34.615 0.00 0.00 33.05 3.84
2162 9498 6.924111 AGTAAGCAATCCAATTTGTTTCGAT 58.076 32.000 0.00 0.00 33.05 3.59
2163 9499 6.325919 AGTAAGCAATCCAATTTGTTTCGA 57.674 33.333 0.00 0.00 33.05 3.71
2178 10852 6.649155 ACCATGTGACACATATAGTAAGCAA 58.351 36.000 20.42 0.00 36.53 3.91
2179 10853 6.233905 ACCATGTGACACATATAGTAAGCA 57.766 37.500 20.42 0.00 36.53 3.91
2181 10855 9.684448 CTAGAACCATGTGACACATATAGTAAG 57.316 37.037 20.42 10.72 36.53 2.34
2183 10857 7.255836 GGCTAGAACCATGTGACACATATAGTA 60.256 40.741 20.42 8.28 36.53 1.82
2184 10858 6.463049 GGCTAGAACCATGTGACACATATAGT 60.463 42.308 20.42 14.80 36.53 2.12
2187 10861 4.164030 TGGCTAGAACCATGTGACACATAT 59.836 41.667 20.42 9.46 36.53 1.78
2188 10862 3.517500 TGGCTAGAACCATGTGACACATA 59.482 43.478 20.42 3.66 36.53 2.29
2198 10885 4.684485 GCTAGATGTGTTGGCTAGAACCAT 60.684 45.833 0.00 0.00 40.13 3.55
2205 10892 1.554617 TGCTGCTAGATGTGTTGGCTA 59.445 47.619 0.00 0.00 0.00 3.93
2207 10894 1.167851 TTGCTGCTAGATGTGTTGGC 58.832 50.000 0.00 0.00 0.00 4.52
2219 10906 1.110442 AGACTAGCGAGATTGCTGCT 58.890 50.000 0.00 0.00 46.70 4.24
2250 11002 1.663702 CGTCGGATATTGCGGTCCC 60.664 63.158 0.00 0.00 0.00 4.46
2256 11008 4.273005 ACAAATGTTCGTCGGATATTGC 57.727 40.909 0.00 0.00 0.00 3.56
2283 11035 8.710551 TCTAAAACGTTCGCAAATATCAACTTA 58.289 29.630 0.00 0.00 0.00 2.24
2284 11036 7.577979 TCTAAAACGTTCGCAAATATCAACTT 58.422 30.769 0.00 0.00 0.00 2.66
2286 11038 7.480542 ACATCTAAAACGTTCGCAAATATCAAC 59.519 33.333 0.00 0.00 0.00 3.18
2294 11046 4.797693 TTGACATCTAAAACGTTCGCAA 57.202 36.364 0.00 0.00 0.00 4.85
2427 11179 4.477780 TGTCAAGCGAACGTTTTCTTTTT 58.522 34.783 0.46 0.00 0.00 1.94
2428 11180 4.086199 TGTCAAGCGAACGTTTTCTTTT 57.914 36.364 0.46 0.00 0.00 2.27
2429 11181 3.750639 TGTCAAGCGAACGTTTTCTTT 57.249 38.095 0.46 0.00 0.00 2.52
2433 11185 4.056050 AGAGTATGTCAAGCGAACGTTTT 58.944 39.130 0.46 0.00 0.00 2.43
2451 11203 4.079970 TGTCGAACATCAACTAGGAGAGT 58.920 43.478 0.00 0.00 41.56 3.24
2458 11210 5.576447 TGATAGCTGTCGAACATCAACTA 57.424 39.130 5.95 0.00 0.00 2.24
2471 11223 9.630098 CTACAAATTCACAAAAATGATAGCTGT 57.370 29.630 0.00 0.00 0.00 4.40
2504 11256 5.809562 TGAGCACGAAACAATTGTCATTTTT 59.190 32.000 12.39 1.43 0.00 1.94
2534 11286 1.413077 CTTCCTACCCGAGGTTCATCC 59.587 57.143 0.72 0.00 46.76 3.51
2545 11297 0.960861 GCAAGCCACACTTCCTACCC 60.961 60.000 0.00 0.00 36.04 3.69
2546 11298 0.250727 TGCAAGCCACACTTCCTACC 60.251 55.000 0.00 0.00 36.04 3.18
2547 11299 1.160137 CTGCAAGCCACACTTCCTAC 58.840 55.000 0.00 0.00 36.04 3.18
2548 11300 0.036732 CCTGCAAGCCACACTTCCTA 59.963 55.000 0.00 0.00 36.04 2.94
2549 11301 1.228367 CCTGCAAGCCACACTTCCT 60.228 57.895 0.00 0.00 36.04 3.36
2550 11302 2.270986 CCCTGCAAGCCACACTTCC 61.271 63.158 0.00 0.00 36.04 3.46
2551 11303 2.270986 CCCCTGCAAGCCACACTTC 61.271 63.158 0.00 0.00 36.04 3.01
2552 11304 2.203538 CCCCTGCAAGCCACACTT 60.204 61.111 0.00 0.00 40.05 3.16
2553 11305 3.501911 ACCCCTGCAAGCCACACT 61.502 61.111 0.00 0.00 0.00 3.55
2554 11306 3.297620 CACCCCTGCAAGCCACAC 61.298 66.667 0.00 0.00 0.00 3.82
2560 11312 3.925630 ATGACCGCACCCCTGCAAG 62.926 63.158 0.00 0.00 44.50 4.01
2561 11313 2.992817 AAATGACCGCACCCCTGCAA 62.993 55.000 0.00 0.00 44.50 4.08
2562 11314 2.992817 AAAATGACCGCACCCCTGCA 62.993 55.000 0.00 0.00 44.50 4.41
2563 11315 2.212900 GAAAATGACCGCACCCCTGC 62.213 60.000 0.00 0.00 40.38 4.85
2564 11316 0.893270 TGAAAATGACCGCACCCCTG 60.893 55.000 0.00 0.00 0.00 4.45
2565 11317 0.178975 TTGAAAATGACCGCACCCCT 60.179 50.000 0.00 0.00 0.00 4.79
2566 11318 0.038618 GTTGAAAATGACCGCACCCC 60.039 55.000 0.00 0.00 0.00 4.95
2581 11333 7.841282 TCCAGTTATTTTGTTATTGGGTTGA 57.159 32.000 0.00 0.00 0.00 3.18
2616 11368 4.851843 TGGATCTCATTTGATGTTCTGCT 58.148 39.130 0.00 0.00 0.00 4.24
2648 11400 8.771920 TCGTCTTGTAATGACACTTAATGAAT 57.228 30.769 0.00 0.00 40.71 2.57
2649 11401 8.655970 CATCGTCTTGTAATGACACTTAATGAA 58.344 33.333 0.00 0.00 40.71 2.57
2657 11409 7.959733 TGTTTATCATCGTCTTGTAATGACAC 58.040 34.615 0.00 0.00 40.71 3.67
2659 11411 8.186178 ACTGTTTATCATCGTCTTGTAATGAC 57.814 34.615 0.00 0.00 37.62 3.06
2667 11419 8.618677 TCGATTACTACTGTTTATCATCGTCTT 58.381 33.333 0.00 0.00 0.00 3.01
2669 11421 8.951954 ATCGATTACTACTGTTTATCATCGTC 57.048 34.615 0.00 0.00 0.00 4.20
2684 11436 9.043079 TGTTGTTGTTGTTGTTATCGATTACTA 57.957 29.630 14.95 5.43 0.00 1.82
2702 11454 9.871238 CCTCTTATGTATTACTACTGTTGTTGT 57.129 33.333 0.00 0.00 36.27 3.32
2703 11455 9.871238 ACCTCTTATGTATTACTACTGTTGTTG 57.129 33.333 0.00 0.00 0.00 3.33
2705 11457 9.251440 TGACCTCTTATGTATTACTACTGTTGT 57.749 33.333 0.00 0.00 0.00 3.32
2706 11458 9.517609 GTGACCTCTTATGTATTACTACTGTTG 57.482 37.037 0.00 0.00 0.00 3.33
2707 11459 9.251440 TGTGACCTCTTATGTATTACTACTGTT 57.749 33.333 0.00 0.00 0.00 3.16
2708 11460 8.818622 TGTGACCTCTTATGTATTACTACTGT 57.181 34.615 0.00 0.00 0.00 3.55
2709 11461 9.737427 CTTGTGACCTCTTATGTATTACTACTG 57.263 37.037 0.00 0.00 0.00 2.74
2710 11462 9.476928 ACTTGTGACCTCTTATGTATTACTACT 57.523 33.333 0.00 0.00 0.00 2.57
2711 11463 9.517609 CACTTGTGACCTCTTATGTATTACTAC 57.482 37.037 0.00 0.00 0.00 2.73
2712 11464 8.195436 GCACTTGTGACCTCTTATGTATTACTA 58.805 37.037 4.79 0.00 0.00 1.82
2713 11465 7.042335 GCACTTGTGACCTCTTATGTATTACT 58.958 38.462 4.79 0.00 0.00 2.24
2714 11466 6.816640 TGCACTTGTGACCTCTTATGTATTAC 59.183 38.462 4.79 0.00 0.00 1.89
2715 11467 6.816640 GTGCACTTGTGACCTCTTATGTATTA 59.183 38.462 10.32 0.00 0.00 0.98
2734 11486 7.979537 TGTACTTAAAATGATCTATCGTGCACT 59.020 33.333 16.19 0.00 0.00 4.40
2744 11496 9.671279 TCATCATGTGTGTACTTAAAATGATCT 57.329 29.630 0.00 0.00 32.44 2.75
2771 11524 8.239681 TGAACTAAAGAACAGTCGATGTAATG 57.760 34.615 0.00 0.00 43.00 1.90
2783 11536 5.779529 ACTACCGACTGAACTAAAGAACA 57.220 39.130 0.00 0.00 0.00 3.18
2799 11552 9.086336 GTTATGCTATCTACTAGACTACTACCG 57.914 40.741 0.00 0.00 0.00 4.02
2862 11615 3.056678 CCTCTATGCTAGCAGACAGGATG 60.057 52.174 24.61 7.65 46.00 3.51
2863 11616 3.164268 CCTCTATGCTAGCAGACAGGAT 58.836 50.000 24.61 8.74 0.00 3.24
2873 11626 6.004574 TGTGTGTATCCTACCTCTATGCTAG 58.995 44.000 0.00 0.00 0.00 3.42
2900 11653 4.786454 ACCCCTTGCCTATTGTAGTCTAAA 59.214 41.667 0.00 0.00 0.00 1.85
2931 11684 4.523943 AGCCAGTGAAATTTGTCTGCATAA 59.476 37.500 0.00 0.00 0.00 1.90
2932 11685 4.081406 AGCCAGTGAAATTTGTCTGCATA 58.919 39.130 0.00 0.00 0.00 3.14
2942 11695 4.210331 GGACCATATCAGCCAGTGAAATT 58.790 43.478 0.00 0.00 39.19 1.82
2946 11699 1.764723 CTGGACCATATCAGCCAGTGA 59.235 52.381 0.00 0.00 42.26 3.41
2947 11700 1.202734 CCTGGACCATATCAGCCAGTG 60.203 57.143 0.00 0.00 44.99 3.66
2948 11701 1.135094 CCTGGACCATATCAGCCAGT 58.865 55.000 0.00 0.00 44.99 4.00
2949 11702 1.135094 ACCTGGACCATATCAGCCAG 58.865 55.000 0.00 0.00 45.81 4.85
2950 11703 2.090775 TCTACCTGGACCATATCAGCCA 60.091 50.000 0.00 0.00 0.00 4.75
2951 11704 2.564947 CTCTACCTGGACCATATCAGCC 59.435 54.545 0.00 0.00 0.00 4.85
2952 11705 3.235200 ACTCTACCTGGACCATATCAGC 58.765 50.000 0.00 0.00 0.00 4.26
2973 11726 6.408107 TGCCCGTATTGTACATTATGTCTA 57.592 37.500 0.00 0.00 0.00 2.59
3002 11755 4.219725 GGGCTTTCTAAGTTGGTGCAAATA 59.780 41.667 0.00 0.00 0.00 1.40
3055 11808 3.446873 TGCTTGTTGAATCAACCACAAGT 59.553 39.130 21.75 0.00 42.96 3.16
3063 11816 8.610248 ATGATGAAAAATGCTTGTTGAATCAA 57.390 26.923 0.00 0.00 0.00 2.57
3067 11820 8.665643 AGAAATGATGAAAAATGCTTGTTGAA 57.334 26.923 0.00 0.00 0.00 2.69
3068 11821 8.665643 AAGAAATGATGAAAAATGCTTGTTGA 57.334 26.923 0.00 0.00 0.00 3.18
3069 11822 8.552865 TGAAGAAATGATGAAAAATGCTTGTTG 58.447 29.630 0.00 0.00 0.00 3.33
3070 11823 8.553696 GTGAAGAAATGATGAAAAATGCTTGTT 58.446 29.630 0.00 0.00 0.00 2.83
3071 11824 7.095940 CGTGAAGAAATGATGAAAAATGCTTGT 60.096 33.333 0.00 0.00 0.00 3.16
3072 11825 7.224710 CGTGAAGAAATGATGAAAAATGCTTG 58.775 34.615 0.00 0.00 0.00 4.01
3073 11826 6.128742 GCGTGAAGAAATGATGAAAAATGCTT 60.129 34.615 0.00 0.00 0.00 3.91
3074 11827 5.346822 GCGTGAAGAAATGATGAAAAATGCT 59.653 36.000 0.00 0.00 0.00 3.79
3075 11828 5.118971 TGCGTGAAGAAATGATGAAAAATGC 59.881 36.000 0.00 0.00 0.00 3.56
3076 11829 6.693761 TGCGTGAAGAAATGATGAAAAATG 57.306 33.333 0.00 0.00 0.00 2.32
3077 11830 6.532657 GGATGCGTGAAGAAATGATGAAAAAT 59.467 34.615 0.00 0.00 0.00 1.82
3078 11831 5.863397 GGATGCGTGAAGAAATGATGAAAAA 59.137 36.000 0.00 0.00 0.00 1.94
3079 11832 5.048154 TGGATGCGTGAAGAAATGATGAAAA 60.048 36.000 0.00 0.00 0.00 2.29
3080 11833 4.458642 TGGATGCGTGAAGAAATGATGAAA 59.541 37.500 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.