Multiple sequence alignment - TraesCS3B01G321100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G321100 chr3B 100.000 3626 0 0 1 3626 520369478 520373103 0.000000e+00 6697.0
1 TraesCS3B01G321100 chr3B 91.457 2189 113 23 1021 3176 520445818 520447965 0.000000e+00 2939.0
2 TraesCS3B01G321100 chr3B 88.069 461 33 12 3178 3626 520448035 520448485 8.920000e-146 527.0
3 TraesCS3B01G321100 chr3B 83.333 60 9 1 415 473 672106855 672106796 2.000000e-03 54.7
4 TraesCS3B01G321100 chr3A 91.835 2829 135 28 860 3626 515722857 515725651 0.000000e+00 3856.0
5 TraesCS3B01G321100 chr3A 91.831 2228 124 21 860 3053 515282879 515285082 0.000000e+00 3053.0
6 TraesCS3B01G321100 chr3A 91.436 362 15 5 3266 3626 515285397 515285743 1.960000e-132 483.0
7 TraesCS3B01G321100 chr3A 81.818 341 17 5 3 342 515282408 515282704 1.010000e-60 244.0
8 TraesCS3B01G321100 chr3A 87.179 195 16 4 366 558 515282693 515282880 2.840000e-51 213.0
9 TraesCS3B01G321100 chr3A 83.226 155 7 3 3068 3222 515285261 515285396 1.370000e-24 124.0
10 TraesCS3B01G321100 chr3A 95.161 62 2 1 507 568 515722799 515722859 2.980000e-16 97.1
11 TraesCS3B01G321100 chr3D 92.477 1954 92 12 960 2880 395641658 395643589 0.000000e+00 2743.0
12 TraesCS3B01G321100 chr3D 94.613 297 16 0 565 861 175803380 175803084 9.170000e-126 460.0
13 TraesCS3B01G321100 chr3D 93.770 305 18 1 564 868 324639281 324639584 1.190000e-124 457.0
14 TraesCS3B01G321100 chr3D 91.279 344 16 7 3285 3626 395643912 395644243 1.190000e-124 457.0
15 TraesCS3B01G321100 chr3D 88.690 336 16 7 2919 3238 395643585 395643914 1.220000e-104 390.0
16 TraesCS3B01G321100 chr3D 83.158 95 11 4 420 510 331192967 331193060 8.340000e-12 82.4
17 TraesCS3B01G321100 chr3D 81.111 90 15 2 420 508 299081124 299081212 1.810000e-08 71.3
18 TraesCS3B01G321100 chr1D 95.302 298 14 0 566 863 455421140 455421437 1.180000e-129 473.0
19 TraesCS3B01G321100 chr1D 94.020 301 18 0 566 866 388144618 388144318 1.190000e-124 457.0
20 TraesCS3B01G321100 chr1D 93.204 309 20 1 562 869 14705684 14705992 1.540000e-123 453.0
21 TraesCS3B01G321100 chr2D 94.966 298 15 0 565 862 555068003 555068300 5.480000e-128 468.0
22 TraesCS3B01G321100 chr2D 93.770 305 19 0 566 870 628034437 628034741 3.300000e-125 459.0
23 TraesCS3B01G321100 chr2D 94.020 301 18 0 566 866 87107805 87107505 1.190000e-124 457.0
24 TraesCS3B01G321100 chr2B 94.613 297 16 0 565 861 480355303 480355599 9.170000e-126 460.0
25 TraesCS3B01G321100 chr2B 83.607 61 8 2 420 479 352205138 352205079 5.060000e-04 56.5
26 TraesCS3B01G321100 chr4B 87.608 347 36 5 566 906 423069993 423069648 2.620000e-106 396.0
27 TraesCS3B01G321100 chr7B 86.167 347 41 5 566 906 621086161 621085816 5.720000e-98 368.0
28 TraesCS3B01G321100 chr6B 87.356 87 10 1 419 505 232168123 232168208 8.290000e-17 99.0
29 TraesCS3B01G321100 chr7D 82.222 90 13 3 417 505 264746828 264746915 1.400000e-09 75.0
30 TraesCS3B01G321100 chr4D 82.022 89 13 3 420 505 295575142 295575054 5.020000e-09 73.1
31 TraesCS3B01G321100 chr1B 97.368 38 1 0 466 503 509151425 509151462 8.400000e-07 65.8
32 TraesCS3B01G321100 chr2A 84.058 69 7 3 420 486 502366571 502366505 3.020000e-06 63.9
33 TraesCS3B01G321100 chr2A 84.211 57 9 0 417 473 179668643 179668587 5.060000e-04 56.5
34 TraesCS3B01G321100 chr5D 94.872 39 2 0 467 505 377529215 377529177 1.090000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G321100 chr3B 520369478 520373103 3625 False 6697.000000 6697 100.000000 1 3626 1 chr3B.!!$F1 3625
1 TraesCS3B01G321100 chr3B 520445818 520448485 2667 False 1733.000000 2939 89.763000 1021 3626 2 chr3B.!!$F2 2605
2 TraesCS3B01G321100 chr3A 515722799 515725651 2852 False 1976.550000 3856 93.498000 507 3626 2 chr3A.!!$F2 3119
3 TraesCS3B01G321100 chr3A 515282408 515285743 3335 False 823.400000 3053 87.098000 3 3626 5 chr3A.!!$F1 3623
4 TraesCS3B01G321100 chr3D 395641658 395644243 2585 False 1196.666667 2743 90.815333 960 3626 3 chr3D.!!$F4 2666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
155 157 0.106167 TAGGATGCTAGCGGAGGTGT 60.106 55.0 10.77 0.0 40.22 4.16 F
589 591 0.108615 CCTCCGTCTAGGTGTGCAAG 60.109 60.0 0.00 0.0 41.99 4.01 F
1704 1737 0.036732 TGCTTTGTAGGGAGGCTGTG 59.963 55.0 0.00 0.0 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1596 1629 0.539986 TGTAAGGTTGCCGGGAGATC 59.460 55.0 2.18 0.0 0.0 2.75 R
2532 2565 0.107654 CCAAGTAGGTGTAGCAGGGC 60.108 60.0 0.00 0.0 0.0 5.19 R
2748 2784 0.320374 TTCAGTACTCGGCTTGTGGG 59.680 55.0 0.00 0.0 0.0 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 4.597404 TGCTGCAAACCATATTTTCACA 57.403 36.364 0.00 0.00 0.00 3.58
48 49 4.953667 TGCTGCAAACCATATTTTCACAA 58.046 34.783 0.00 0.00 0.00 3.33
54 55 7.946207 TGCAAACCATATTTTCACAAAGAGTA 58.054 30.769 0.00 0.00 0.00 2.59
66 67 6.174720 TCACAAAGAGTATCAGGACAAACT 57.825 37.500 0.00 0.00 37.82 2.66
81 82 0.249741 AAACTCCAGTTCCGTCCACG 60.250 55.000 0.00 0.00 37.25 4.94
82 83 2.432628 CTCCAGTTCCGTCCACGC 60.433 66.667 0.00 0.00 38.18 5.34
83 84 2.915659 TCCAGTTCCGTCCACGCT 60.916 61.111 0.00 0.00 38.18 5.07
84 85 2.738521 CCAGTTCCGTCCACGCTG 60.739 66.667 0.00 0.00 38.18 5.18
85 86 2.738521 CAGTTCCGTCCACGCTGG 60.739 66.667 0.00 0.00 39.43 4.85
86 87 2.915659 AGTTCCGTCCACGCTGGA 60.916 61.111 3.02 3.02 45.98 3.86
96 97 3.391506 TCCACGCTGGATTCAGATATG 57.608 47.619 4.75 0.00 42.67 1.78
97 98 1.802960 CCACGCTGGATTCAGATATGC 59.197 52.381 4.75 0.00 40.96 3.14
98 99 2.486918 CACGCTGGATTCAGATATGCA 58.513 47.619 4.75 0.00 43.49 3.96
99 100 2.874086 CACGCTGGATTCAGATATGCAA 59.126 45.455 4.75 0.00 43.49 4.08
100 101 3.313249 CACGCTGGATTCAGATATGCAAA 59.687 43.478 4.75 0.00 43.49 3.68
101 102 3.947196 ACGCTGGATTCAGATATGCAAAA 59.053 39.130 4.75 0.00 43.49 2.44
102 103 4.398988 ACGCTGGATTCAGATATGCAAAAA 59.601 37.500 4.75 0.00 43.49 1.94
124 125 6.534475 AAGCTGGATTCAGATATGCAAAAA 57.466 33.333 4.75 0.00 43.49 1.94
153 155 1.333177 CTTAGGATGCTAGCGGAGGT 58.667 55.000 10.77 0.00 44.89 3.85
155 157 0.106167 TAGGATGCTAGCGGAGGTGT 60.106 55.000 10.77 0.00 40.22 4.16
193 195 0.391661 TGAGATTCTTGCTGACCGCC 60.392 55.000 0.00 0.00 38.05 6.13
194 196 1.424493 GAGATTCTTGCTGACCGCCG 61.424 60.000 0.00 0.00 38.05 6.46
195 197 3.100862 GATTCTTGCTGACCGCCGC 62.101 63.158 0.00 0.00 38.05 6.53
196 198 3.899981 ATTCTTGCTGACCGCCGCA 62.900 57.895 0.00 0.00 38.05 5.69
197 199 4.617520 TCTTGCTGACCGCCGCAA 62.618 61.111 0.00 0.00 43.21 4.85
198 200 3.434319 CTTGCTGACCGCCGCAAT 61.434 61.111 0.00 0.00 44.22 3.56
199 201 3.386867 CTTGCTGACCGCCGCAATC 62.387 63.158 0.00 0.00 44.22 2.67
200 202 3.899981 TTGCTGACCGCCGCAATCT 62.900 57.895 0.00 0.00 40.84 2.40
201 203 3.127533 GCTGACCGCCGCAATCTT 61.128 61.111 0.00 0.00 0.00 2.40
202 204 2.690778 GCTGACCGCCGCAATCTTT 61.691 57.895 0.00 0.00 0.00 2.52
203 205 1.875963 CTGACCGCCGCAATCTTTT 59.124 52.632 0.00 0.00 0.00 2.27
204 206 0.179189 CTGACCGCCGCAATCTTTTC 60.179 55.000 0.00 0.00 0.00 2.29
205 207 0.886938 TGACCGCCGCAATCTTTTCA 60.887 50.000 0.00 0.00 0.00 2.69
206 208 0.451783 GACCGCCGCAATCTTTTCAT 59.548 50.000 0.00 0.00 0.00 2.57
207 209 1.668751 GACCGCCGCAATCTTTTCATA 59.331 47.619 0.00 0.00 0.00 2.15
208 210 2.088423 ACCGCCGCAATCTTTTCATAA 58.912 42.857 0.00 0.00 0.00 1.90
209 211 2.490115 ACCGCCGCAATCTTTTCATAAA 59.510 40.909 0.00 0.00 0.00 1.40
210 212 3.108144 CCGCCGCAATCTTTTCATAAAG 58.892 45.455 0.00 0.00 41.74 1.85
223 225 6.874134 TCTTTTCATAAAGAGGAGAAACTCGG 59.126 38.462 0.00 0.00 43.63 4.63
226 228 4.162320 TCATAAAGAGGAGAAACTCGGCAT 59.838 41.667 0.00 0.00 42.31 4.40
233 235 3.383185 AGGAGAAACTCGGCATTCTAGAG 59.617 47.826 0.00 0.00 36.08 2.43
235 237 4.142138 GGAGAAACTCGGCATTCTAGAGAA 60.142 45.833 0.00 0.00 36.08 2.87
236 238 5.452636 GGAGAAACTCGGCATTCTAGAGAAT 60.453 44.000 0.00 0.00 44.93 2.40
261 263 5.233083 TCTTGTGACCATTCATCACTCTT 57.767 39.130 6.68 0.00 45.58 2.85
269 271 8.734386 GTGACCATTCATCACTCTTAAATCTTT 58.266 33.333 0.00 0.00 42.68 2.52
291 293 6.358974 TTGTGAAGTTCTACAGATCCATGA 57.641 37.500 4.17 0.00 0.00 3.07
305 307 0.247736 CCATGATACTAGCTCCGCCC 59.752 60.000 0.00 0.00 0.00 6.13
342 344 8.019094 CACCGTTTTAGGGTTTAAAGTCAATAG 58.981 37.037 0.00 0.00 33.44 1.73
343 345 7.938490 ACCGTTTTAGGGTTTAAAGTCAATAGA 59.062 33.333 0.00 0.00 31.25 1.98
376 378 9.672673 ATTGTACTAGCTGTCTTAAATGTCATT 57.327 29.630 0.00 0.00 0.00 2.57
377 379 9.502091 TTGTACTAGCTGTCTTAAATGTCATTT 57.498 29.630 14.98 14.98 36.29 2.32
378 380 9.151471 TGTACTAGCTGTCTTAAATGTCATTTC 57.849 33.333 14.07 1.36 33.82 2.17
379 381 7.617041 ACTAGCTGTCTTAAATGTCATTTCC 57.383 36.000 14.07 2.89 33.82 3.13
391 393 4.686191 TGTCATTTCCAGCCATGTTTTT 57.314 36.364 0.00 0.00 0.00 1.94
428 430 2.396608 GGGGTCTTTAGTACTCCCTCC 58.603 57.143 14.53 6.14 38.31 4.30
446 448 4.562757 CCCTCCGTCTCAAAATAAGTGTCA 60.563 45.833 0.00 0.00 0.00 3.58
448 450 4.312443 TCCGTCTCAAAATAAGTGTCACC 58.688 43.478 0.00 0.00 0.00 4.02
456 458 7.118680 TCTCAAAATAAGTGTCACCGATTTACC 59.881 37.037 11.25 0.00 0.00 2.85
465 467 8.795842 AGTGTCACCGATTTACCATAAAATTA 57.204 30.769 0.00 0.00 0.00 1.40
491 493 9.950680 ATACTAAATCAGCGACATTTATTTTGG 57.049 29.630 0.00 0.00 0.00 3.28
492 494 7.257722 ACTAAATCAGCGACATTTATTTTGGG 58.742 34.615 0.00 0.00 0.00 4.12
496 498 3.126171 CAGCGACATTTATTTTGGGACGA 59.874 43.478 0.00 0.00 0.00 4.20
505 507 5.502089 TTATTTTGGGACGAAGGGAGTAA 57.498 39.130 0.00 0.00 0.00 2.24
515 517 3.181437 ACGAAGGGAGTAATTTGGTTGGT 60.181 43.478 0.00 0.00 0.00 3.67
524 526 9.027202 GGGAGTAATTTGGTTGGTAAATTTAGA 57.973 33.333 0.00 0.00 38.36 2.10
571 573 9.249053 TCAATGTTCTATATCTCAGATACTCCC 57.751 37.037 0.00 0.00 0.00 4.30
572 574 9.253832 CAATGTTCTATATCTCAGATACTCCCT 57.746 37.037 0.00 0.00 0.00 4.20
573 575 9.474313 AATGTTCTATATCTCAGATACTCCCTC 57.526 37.037 0.00 0.00 0.00 4.30
574 576 7.406916 TGTTCTATATCTCAGATACTCCCTCC 58.593 42.308 0.00 0.00 0.00 4.30
575 577 6.241882 TCTATATCTCAGATACTCCCTCCG 57.758 45.833 0.00 0.00 0.00 4.63
576 578 4.938575 ATATCTCAGATACTCCCTCCGT 57.061 45.455 0.00 0.00 0.00 4.69
577 579 2.642154 TCTCAGATACTCCCTCCGTC 57.358 55.000 0.00 0.00 0.00 4.79
578 580 2.128535 TCTCAGATACTCCCTCCGTCT 58.871 52.381 0.00 0.00 0.00 4.18
579 581 3.315596 TCTCAGATACTCCCTCCGTCTA 58.684 50.000 0.00 0.00 0.00 2.59
580 582 3.325425 TCTCAGATACTCCCTCCGTCTAG 59.675 52.174 0.00 0.00 0.00 2.43
581 583 2.372504 TCAGATACTCCCTCCGTCTAGG 59.627 54.545 0.00 0.00 42.97 3.02
582 584 2.106857 CAGATACTCCCTCCGTCTAGGT 59.893 54.545 0.00 0.00 41.99 3.08
583 585 2.106857 AGATACTCCCTCCGTCTAGGTG 59.893 54.545 0.00 0.00 41.99 4.00
584 586 1.293062 TACTCCCTCCGTCTAGGTGT 58.707 55.000 0.00 0.00 41.99 4.16
585 587 0.323542 ACTCCCTCCGTCTAGGTGTG 60.324 60.000 0.00 0.00 41.99 3.82
586 588 1.668101 CTCCCTCCGTCTAGGTGTGC 61.668 65.000 0.00 0.00 41.99 4.57
587 589 1.982395 CCCTCCGTCTAGGTGTGCA 60.982 63.158 0.00 0.00 41.99 4.57
588 590 1.541310 CCCTCCGTCTAGGTGTGCAA 61.541 60.000 0.00 0.00 41.99 4.08
589 591 0.108615 CCTCCGTCTAGGTGTGCAAG 60.109 60.000 0.00 0.00 41.99 4.01
590 592 0.603569 CTCCGTCTAGGTGTGCAAGT 59.396 55.000 0.00 0.00 41.99 3.16
591 593 0.601558 TCCGTCTAGGTGTGCAAGTC 59.398 55.000 0.00 0.00 41.99 3.01
592 594 0.317160 CCGTCTAGGTGTGCAAGTCA 59.683 55.000 0.00 0.00 34.51 3.41
593 595 1.066858 CCGTCTAGGTGTGCAAGTCAT 60.067 52.381 0.00 0.00 34.51 3.06
594 596 2.263077 CGTCTAGGTGTGCAAGTCATC 58.737 52.381 0.00 0.00 0.00 2.92
595 597 2.094494 CGTCTAGGTGTGCAAGTCATCT 60.094 50.000 0.00 0.00 0.00 2.90
596 598 3.615110 CGTCTAGGTGTGCAAGTCATCTT 60.615 47.826 0.00 0.00 0.00 2.40
597 599 4.380550 CGTCTAGGTGTGCAAGTCATCTTA 60.381 45.833 0.00 0.00 32.07 2.10
598 600 4.865365 GTCTAGGTGTGCAAGTCATCTTAC 59.135 45.833 0.00 0.00 32.07 2.34
599 601 3.769739 AGGTGTGCAAGTCATCTTACA 57.230 42.857 0.00 0.00 32.07 2.41
600 602 4.085357 AGGTGTGCAAGTCATCTTACAA 57.915 40.909 0.00 0.00 30.00 2.41
601 603 4.460263 AGGTGTGCAAGTCATCTTACAAA 58.540 39.130 0.00 0.00 30.00 2.83
602 604 4.887071 AGGTGTGCAAGTCATCTTACAAAA 59.113 37.500 0.00 0.00 30.00 2.44
603 605 5.359576 AGGTGTGCAAGTCATCTTACAAAAA 59.640 36.000 0.00 0.00 30.00 1.94
604 606 6.040842 AGGTGTGCAAGTCATCTTACAAAAAT 59.959 34.615 0.00 0.00 30.00 1.82
605 607 6.363357 GGTGTGCAAGTCATCTTACAAAAATC 59.637 38.462 0.00 0.00 30.00 2.17
606 608 6.917477 GTGTGCAAGTCATCTTACAAAAATCA 59.083 34.615 0.00 0.00 30.00 2.57
607 609 7.434897 GTGTGCAAGTCATCTTACAAAAATCAA 59.565 33.333 0.00 0.00 30.00 2.57
608 610 7.978414 TGTGCAAGTCATCTTACAAAAATCAAA 59.022 29.630 0.00 0.00 30.00 2.69
609 611 8.981647 GTGCAAGTCATCTTACAAAAATCAAAT 58.018 29.630 0.00 0.00 30.00 2.32
623 625 9.625747 ACAAAAATCAAATAATCCCAAAACACT 57.374 25.926 0.00 0.00 0.00 3.55
629 631 7.812648 TCAAATAATCCCAAAACACTTAGACG 58.187 34.615 0.00 0.00 0.00 4.18
630 632 5.813080 ATAATCCCAAAACACTTAGACGC 57.187 39.130 0.00 0.00 0.00 5.19
631 633 1.504359 TCCCAAAACACTTAGACGCG 58.496 50.000 3.53 3.53 0.00 6.01
632 634 1.068895 TCCCAAAACACTTAGACGCGA 59.931 47.619 15.93 0.00 0.00 5.87
633 635 2.073816 CCCAAAACACTTAGACGCGAT 58.926 47.619 15.93 2.85 0.00 4.58
634 636 2.159707 CCCAAAACACTTAGACGCGATG 60.160 50.000 15.93 3.33 0.00 3.84
635 637 2.495939 CAAAACACTTAGACGCGATGC 58.504 47.619 15.93 0.85 0.00 3.91
636 638 1.790755 AAACACTTAGACGCGATGCA 58.209 45.000 15.93 0.00 0.00 3.96
637 639 2.010145 AACACTTAGACGCGATGCAT 57.990 45.000 15.93 0.00 0.00 3.96
638 640 2.010145 ACACTTAGACGCGATGCATT 57.990 45.000 15.93 0.00 0.00 3.56
639 641 3.159353 ACACTTAGACGCGATGCATTA 57.841 42.857 15.93 0.00 0.00 1.90
640 642 3.517602 ACACTTAGACGCGATGCATTAA 58.482 40.909 15.93 1.06 0.00 1.40
641 643 3.306166 ACACTTAGACGCGATGCATTAAC 59.694 43.478 15.93 0.00 0.00 2.01
642 644 3.551890 CACTTAGACGCGATGCATTAACT 59.448 43.478 15.93 0.00 0.00 2.24
643 645 4.032900 CACTTAGACGCGATGCATTAACTT 59.967 41.667 15.93 0.00 0.00 2.66
644 646 4.267928 ACTTAGACGCGATGCATTAACTTC 59.732 41.667 15.93 0.00 0.00 3.01
645 647 2.893637 AGACGCGATGCATTAACTTCT 58.106 42.857 15.93 0.00 0.00 2.85
646 648 4.041740 AGACGCGATGCATTAACTTCTA 57.958 40.909 15.93 0.00 0.00 2.10
647 649 3.797256 AGACGCGATGCATTAACTTCTAC 59.203 43.478 15.93 0.00 0.00 2.59
648 650 2.864343 ACGCGATGCATTAACTTCTACC 59.136 45.455 15.93 0.00 0.00 3.18
649 651 3.123804 CGCGATGCATTAACTTCTACCT 58.876 45.455 0.00 0.00 0.00 3.08
650 652 3.182572 CGCGATGCATTAACTTCTACCTC 59.817 47.826 0.00 0.00 0.00 3.85
651 653 3.182572 GCGATGCATTAACTTCTACCTCG 59.817 47.826 0.00 0.00 0.00 4.63
652 654 4.360563 CGATGCATTAACTTCTACCTCGT 58.639 43.478 0.00 0.00 0.00 4.18
653 655 4.804139 CGATGCATTAACTTCTACCTCGTT 59.196 41.667 0.00 0.00 0.00 3.85
654 656 5.291128 CGATGCATTAACTTCTACCTCGTTT 59.709 40.000 0.00 0.00 0.00 3.60
655 657 6.508088 CGATGCATTAACTTCTACCTCGTTTC 60.508 42.308 0.00 0.00 0.00 2.78
656 658 5.790593 TGCATTAACTTCTACCTCGTTTCT 58.209 37.500 0.00 0.00 0.00 2.52
657 659 6.228258 TGCATTAACTTCTACCTCGTTTCTT 58.772 36.000 0.00 0.00 0.00 2.52
658 660 6.147164 TGCATTAACTTCTACCTCGTTTCTTG 59.853 38.462 0.00 0.00 0.00 3.02
659 661 6.147328 GCATTAACTTCTACCTCGTTTCTTGT 59.853 38.462 0.00 0.00 0.00 3.16
660 662 7.307811 GCATTAACTTCTACCTCGTTTCTTGTT 60.308 37.037 0.00 0.00 0.00 2.83
661 663 8.557029 CATTAACTTCTACCTCGTTTCTTGTTT 58.443 33.333 0.00 0.00 0.00 2.83
662 664 6.600246 AACTTCTACCTCGTTTCTTGTTTC 57.400 37.500 0.00 0.00 0.00 2.78
663 665 5.915175 ACTTCTACCTCGTTTCTTGTTTCT 58.085 37.500 0.00 0.00 0.00 2.52
664 666 6.346896 ACTTCTACCTCGTTTCTTGTTTCTT 58.653 36.000 0.00 0.00 0.00 2.52
665 667 6.258068 ACTTCTACCTCGTTTCTTGTTTCTTG 59.742 38.462 0.00 0.00 0.00 3.02
666 668 5.909477 TCTACCTCGTTTCTTGTTTCTTGA 58.091 37.500 0.00 0.00 0.00 3.02
667 669 4.877323 ACCTCGTTTCTTGTTTCTTGAC 57.123 40.909 0.00 0.00 0.00 3.18
668 670 4.258543 ACCTCGTTTCTTGTTTCTTGACA 58.741 39.130 0.00 0.00 0.00 3.58
669 671 4.881850 ACCTCGTTTCTTGTTTCTTGACAT 59.118 37.500 0.00 0.00 0.00 3.06
670 672 6.053005 ACCTCGTTTCTTGTTTCTTGACATA 58.947 36.000 0.00 0.00 0.00 2.29
671 673 6.710744 ACCTCGTTTCTTGTTTCTTGACATAT 59.289 34.615 0.00 0.00 0.00 1.78
672 674 7.095187 ACCTCGTTTCTTGTTTCTTGACATATC 60.095 37.037 0.00 0.00 0.00 1.63
673 675 7.095229 CCTCGTTTCTTGTTTCTTGACATATCA 60.095 37.037 0.00 0.00 0.00 2.15
674 676 8.148807 TCGTTTCTTGTTTCTTGACATATCAA 57.851 30.769 0.00 0.00 42.73 2.57
675 677 8.067784 TCGTTTCTTGTTTCTTGACATATCAAC 58.932 33.333 0.00 0.00 40.01 3.18
676 678 7.323656 CGTTTCTTGTTTCTTGACATATCAACC 59.676 37.037 0.00 0.00 40.01 3.77
677 679 7.815840 TTCTTGTTTCTTGACATATCAACCA 57.184 32.000 0.00 0.00 40.01 3.67
678 680 7.815840 TCTTGTTTCTTGACATATCAACCAA 57.184 32.000 0.00 0.00 40.01 3.67
679 681 8.408043 TCTTGTTTCTTGACATATCAACCAAT 57.592 30.769 0.00 0.00 40.01 3.16
680 682 9.513906 TCTTGTTTCTTGACATATCAACCAATA 57.486 29.630 0.00 0.00 40.01 1.90
683 685 9.513906 TGTTTCTTGACATATCAACCAATAAGA 57.486 29.630 0.00 0.00 40.01 2.10
684 686 9.994432 GTTTCTTGACATATCAACCAATAAGAG 57.006 33.333 0.00 0.00 40.01 2.85
685 687 9.958180 TTTCTTGACATATCAACCAATAAGAGA 57.042 29.630 0.00 0.00 40.01 3.10
687 689 9.551734 TCTTGACATATCAACCAATAAGAGATG 57.448 33.333 0.00 0.00 40.01 2.90
688 690 9.551734 CTTGACATATCAACCAATAAGAGATGA 57.448 33.333 0.00 0.00 40.01 2.92
689 691 9.551734 TTGACATATCAACCAATAAGAGATGAG 57.448 33.333 0.00 0.00 40.01 2.90
690 692 8.152898 TGACATATCAACCAATAAGAGATGAGG 58.847 37.037 0.00 0.00 35.26 3.86
691 693 8.267620 ACATATCAACCAATAAGAGATGAGGA 57.732 34.615 0.00 0.00 35.26 3.71
692 694 8.717717 ACATATCAACCAATAAGAGATGAGGAA 58.282 33.333 0.00 0.00 35.26 3.36
693 695 9.736414 CATATCAACCAATAAGAGATGAGGAAT 57.264 33.333 0.00 0.00 33.96 3.01
694 696 9.736414 ATATCAACCAATAAGAGATGAGGAATG 57.264 33.333 0.00 0.00 0.00 2.67
695 697 6.962182 TCAACCAATAAGAGATGAGGAATGT 58.038 36.000 0.00 0.00 0.00 2.71
696 698 8.089625 TCAACCAATAAGAGATGAGGAATGTA 57.910 34.615 0.00 0.00 0.00 2.29
697 699 7.987458 TCAACCAATAAGAGATGAGGAATGTAC 59.013 37.037 0.00 0.00 0.00 2.90
698 700 7.437713 ACCAATAAGAGATGAGGAATGTACA 57.562 36.000 0.00 0.00 0.00 2.90
699 701 8.038862 ACCAATAAGAGATGAGGAATGTACAT 57.961 34.615 1.41 1.41 0.00 2.29
700 702 7.935755 ACCAATAAGAGATGAGGAATGTACATG 59.064 37.037 9.63 0.00 0.00 3.21
701 703 7.094890 CCAATAAGAGATGAGGAATGTACATGC 60.095 40.741 9.63 7.30 0.00 4.06
702 704 5.627182 AAGAGATGAGGAATGTACATGCT 57.373 39.130 13.70 6.43 0.00 3.79
703 705 5.627182 AGAGATGAGGAATGTACATGCTT 57.373 39.130 13.70 5.92 0.00 3.91
704 706 5.999044 AGAGATGAGGAATGTACATGCTTT 58.001 37.500 13.70 2.63 0.00 3.51
705 707 6.421485 AGAGATGAGGAATGTACATGCTTTT 58.579 36.000 13.70 0.00 0.00 2.27
706 708 7.568349 AGAGATGAGGAATGTACATGCTTTTA 58.432 34.615 13.70 0.51 0.00 1.52
707 709 8.049117 AGAGATGAGGAATGTACATGCTTTTAA 58.951 33.333 13.70 0.00 0.00 1.52
708 710 8.757982 AGATGAGGAATGTACATGCTTTTAAT 57.242 30.769 13.70 2.18 0.00 1.40
709 711 9.851686 AGATGAGGAATGTACATGCTTTTAATA 57.148 29.630 13.70 0.00 0.00 0.98
712 714 9.461312 TGAGGAATGTACATGCTTTTAATAACT 57.539 29.630 13.70 0.00 0.00 2.24
719 721 9.502091 TGTACATGCTTTTAATAACTTGAGACT 57.498 29.630 0.00 0.00 0.00 3.24
722 724 8.947115 ACATGCTTTTAATAACTTGAGACTACC 58.053 33.333 0.00 0.00 0.00 3.18
723 725 8.946085 CATGCTTTTAATAACTTGAGACTACCA 58.054 33.333 0.00 0.00 0.00 3.25
724 726 8.911918 TGCTTTTAATAACTTGAGACTACCAA 57.088 30.769 0.00 0.00 0.00 3.67
725 727 9.344772 TGCTTTTAATAACTTGAGACTACCAAA 57.655 29.630 0.00 0.00 0.00 3.28
726 728 9.608617 GCTTTTAATAACTTGAGACTACCAAAC 57.391 33.333 0.00 0.00 0.00 2.93
729 731 9.616156 TTTAATAACTTGAGACTACCAAACACA 57.384 29.630 0.00 0.00 0.00 3.72
730 732 9.616156 TTAATAACTTGAGACTACCAAACACAA 57.384 29.630 0.00 0.00 0.00 3.33
731 733 5.813080 AACTTGAGACTACCAAACACAAC 57.187 39.130 0.00 0.00 0.00 3.32
732 734 4.839121 ACTTGAGACTACCAAACACAACA 58.161 39.130 0.00 0.00 0.00 3.33
733 735 5.437060 ACTTGAGACTACCAAACACAACAT 58.563 37.500 0.00 0.00 0.00 2.71
734 736 5.296780 ACTTGAGACTACCAAACACAACATG 59.703 40.000 0.00 0.00 0.00 3.21
735 737 3.563808 TGAGACTACCAAACACAACATGC 59.436 43.478 0.00 0.00 0.00 4.06
736 738 3.550820 AGACTACCAAACACAACATGCA 58.449 40.909 0.00 0.00 0.00 3.96
737 739 3.565482 AGACTACCAAACACAACATGCAG 59.435 43.478 0.00 0.00 0.00 4.41
738 740 3.287222 ACTACCAAACACAACATGCAGT 58.713 40.909 0.00 0.00 0.00 4.40
739 741 2.582728 ACCAAACACAACATGCAGTG 57.417 45.000 14.53 14.53 41.40 3.66
740 742 1.136695 ACCAAACACAACATGCAGTGG 59.863 47.619 18.78 8.32 39.99 4.00
741 743 1.136695 CCAAACACAACATGCAGTGGT 59.863 47.619 18.78 11.89 39.99 4.16
742 744 2.418471 CCAAACACAACATGCAGTGGTT 60.418 45.455 18.78 16.40 45.86 3.67
743 745 3.181482 CCAAACACAACATGCAGTGGTTA 60.181 43.478 17.78 0.00 43.31 2.85
744 746 3.988379 AACACAACATGCAGTGGTTAG 57.012 42.857 18.78 4.47 39.99 2.34
745 747 2.930950 ACACAACATGCAGTGGTTAGT 58.069 42.857 18.78 4.98 39.99 2.24
746 748 3.287222 ACACAACATGCAGTGGTTAGTT 58.713 40.909 18.78 0.00 39.99 2.24
747 749 3.315191 ACACAACATGCAGTGGTTAGTTC 59.685 43.478 18.78 0.00 39.99 3.01
748 750 3.314913 CACAACATGCAGTGGTTAGTTCA 59.685 43.478 9.60 0.00 29.67 3.18
749 751 4.022935 CACAACATGCAGTGGTTAGTTCAT 60.023 41.667 9.60 0.00 29.67 2.57
750 752 4.584325 ACAACATGCAGTGGTTAGTTCATT 59.416 37.500 0.00 0.00 26.39 2.57
751 753 4.771590 ACATGCAGTGGTTAGTTCATTG 57.228 40.909 0.00 0.00 0.00 2.82
752 754 4.144297 ACATGCAGTGGTTAGTTCATTGT 58.856 39.130 0.00 0.00 0.00 2.71
753 755 5.312895 ACATGCAGTGGTTAGTTCATTGTA 58.687 37.500 0.00 0.00 0.00 2.41
754 756 5.945784 ACATGCAGTGGTTAGTTCATTGTAT 59.054 36.000 0.00 0.00 30.23 2.29
755 757 5.878332 TGCAGTGGTTAGTTCATTGTATG 57.122 39.130 0.00 0.00 0.00 2.39
756 758 4.155826 TGCAGTGGTTAGTTCATTGTATGC 59.844 41.667 0.00 0.00 0.00 3.14
757 759 4.155826 GCAGTGGTTAGTTCATTGTATGCA 59.844 41.667 0.00 0.00 0.00 3.96
758 760 5.335583 GCAGTGGTTAGTTCATTGTATGCAA 60.336 40.000 0.00 0.00 39.16 4.08
759 761 6.625740 GCAGTGGTTAGTTCATTGTATGCAAT 60.626 38.462 2.84 2.84 45.42 3.56
794 796 7.308782 AGCAAATAAACATTAAGGTCTCTCG 57.691 36.000 0.00 0.00 0.00 4.04
795 797 6.879458 AGCAAATAAACATTAAGGTCTCTCGT 59.121 34.615 0.00 0.00 0.00 4.18
796 798 7.390718 AGCAAATAAACATTAAGGTCTCTCGTT 59.609 33.333 0.00 0.00 0.00 3.85
797 799 8.021396 GCAAATAAACATTAAGGTCTCTCGTTT 58.979 33.333 0.00 0.00 0.00 3.60
798 800 9.893305 CAAATAAACATTAAGGTCTCTCGTTTT 57.107 29.630 0.00 0.00 0.00 2.43
800 802 9.503399 AATAAACATTAAGGTCTCTCGTTTTCT 57.497 29.630 0.00 0.00 0.00 2.52
801 803 7.422878 AAACATTAAGGTCTCTCGTTTTCTC 57.577 36.000 0.00 0.00 0.00 2.87
802 804 5.480205 ACATTAAGGTCTCTCGTTTTCTCC 58.520 41.667 0.00 0.00 0.00 3.71
803 805 5.246429 ACATTAAGGTCTCTCGTTTTCTCCT 59.754 40.000 0.00 0.00 0.00 3.69
804 806 3.945981 AAGGTCTCTCGTTTTCTCCTC 57.054 47.619 0.00 0.00 0.00 3.71
805 807 2.172679 AGGTCTCTCGTTTTCTCCTCC 58.827 52.381 0.00 0.00 0.00 4.30
806 808 2.172679 GGTCTCTCGTTTTCTCCTCCT 58.827 52.381 0.00 0.00 0.00 3.69
807 809 2.164827 GGTCTCTCGTTTTCTCCTCCTC 59.835 54.545 0.00 0.00 0.00 3.71
808 810 2.164827 GTCTCTCGTTTTCTCCTCCTCC 59.835 54.545 0.00 0.00 0.00 4.30
809 811 2.041891 TCTCTCGTTTTCTCCTCCTCCT 59.958 50.000 0.00 0.00 0.00 3.69
810 812 2.829120 CTCTCGTTTTCTCCTCCTCCTT 59.171 50.000 0.00 0.00 0.00 3.36
811 813 2.563179 TCTCGTTTTCTCCTCCTCCTTG 59.437 50.000 0.00 0.00 0.00 3.61
812 814 1.623811 TCGTTTTCTCCTCCTCCTTGG 59.376 52.381 0.00 0.00 37.10 3.61
813 815 1.348036 CGTTTTCTCCTCCTCCTTGGT 59.652 52.381 0.00 0.00 37.07 3.67
814 816 2.613223 CGTTTTCTCCTCCTCCTTGGTC 60.613 54.545 0.00 0.00 37.07 4.02
815 817 2.372172 GTTTTCTCCTCCTCCTTGGTCA 59.628 50.000 0.00 0.00 37.07 4.02
816 818 2.649742 TTCTCCTCCTCCTTGGTCAT 57.350 50.000 0.00 0.00 37.07 3.06
817 819 1.871418 TCTCCTCCTCCTTGGTCATG 58.129 55.000 0.00 0.00 37.07 3.07
818 820 0.835941 CTCCTCCTCCTTGGTCATGG 59.164 60.000 0.00 0.00 37.07 3.66
819 821 0.119155 TCCTCCTCCTTGGTCATGGT 59.881 55.000 0.00 0.00 37.07 3.55
820 822 0.254178 CCTCCTCCTTGGTCATGGTG 59.746 60.000 0.00 1.53 37.07 4.17
821 823 0.393537 CTCCTCCTTGGTCATGGTGC 60.394 60.000 0.00 0.00 37.07 5.01
822 824 1.133181 TCCTCCTTGGTCATGGTGCA 61.133 55.000 0.00 0.00 37.07 4.57
823 825 0.962356 CCTCCTTGGTCATGGTGCAC 60.962 60.000 8.80 8.80 0.00 4.57
824 826 0.250858 CTCCTTGGTCATGGTGCACA 60.251 55.000 20.43 5.24 0.00 4.57
825 827 0.184692 TCCTTGGTCATGGTGCACAA 59.815 50.000 20.43 8.12 0.00 3.33
826 828 0.314935 CCTTGGTCATGGTGCACAAC 59.685 55.000 20.43 10.47 0.00 3.32
838 840 4.584327 GGTGCACAACCTAAAATGACTT 57.416 40.909 20.43 0.00 46.55 3.01
839 841 5.699097 GGTGCACAACCTAAAATGACTTA 57.301 39.130 20.43 0.00 46.55 2.24
840 842 5.458015 GGTGCACAACCTAAAATGACTTAC 58.542 41.667 20.43 0.00 46.55 2.34
841 843 5.240844 GGTGCACAACCTAAAATGACTTACT 59.759 40.000 20.43 0.00 46.55 2.24
842 844 6.371389 GTGCACAACCTAAAATGACTTACTC 58.629 40.000 13.17 0.00 0.00 2.59
843 845 6.017440 GTGCACAACCTAAAATGACTTACTCA 60.017 38.462 13.17 0.00 0.00 3.41
844 846 6.017440 TGCACAACCTAAAATGACTTACTCAC 60.017 38.462 0.00 0.00 0.00 3.51
845 847 6.567891 GCACAACCTAAAATGACTTACTCACC 60.568 42.308 0.00 0.00 0.00 4.02
846 848 6.710744 CACAACCTAAAATGACTTACTCACCT 59.289 38.462 0.00 0.00 0.00 4.00
847 849 7.876068 CACAACCTAAAATGACTTACTCACCTA 59.124 37.037 0.00 0.00 0.00 3.08
848 850 8.095169 ACAACCTAAAATGACTTACTCACCTAG 58.905 37.037 0.00 0.00 0.00 3.02
849 851 8.311836 CAACCTAAAATGACTTACTCACCTAGA 58.688 37.037 0.00 0.00 0.00 2.43
850 852 7.838884 ACCTAAAATGACTTACTCACCTAGAC 58.161 38.462 0.00 0.00 0.00 2.59
851 853 6.973474 CCTAAAATGACTTACTCACCTAGACG 59.027 42.308 0.00 0.00 0.00 4.18
852 854 4.985538 AATGACTTACTCACCTAGACGG 57.014 45.455 0.00 0.00 39.35 4.79
853 855 3.708403 TGACTTACTCACCTAGACGGA 57.292 47.619 0.00 0.00 36.31 4.69
854 856 3.607741 TGACTTACTCACCTAGACGGAG 58.392 50.000 0.00 0.00 36.31 4.63
855 857 2.944349 GACTTACTCACCTAGACGGAGG 59.056 54.545 0.00 0.00 42.89 4.30
856 858 2.299521 CTTACTCACCTAGACGGAGGG 58.700 57.143 5.42 0.00 41.36 4.30
857 859 1.588239 TACTCACCTAGACGGAGGGA 58.412 55.000 5.42 0.16 41.36 4.20
858 860 0.256464 ACTCACCTAGACGGAGGGAG 59.744 60.000 12.80 12.80 41.36 4.30
859 861 0.256464 CTCACCTAGACGGAGGGAGT 59.744 60.000 5.42 0.00 41.36 3.85
860 862 1.489649 CTCACCTAGACGGAGGGAGTA 59.510 57.143 5.42 0.00 41.36 2.59
861 863 1.211457 TCACCTAGACGGAGGGAGTAC 59.789 57.143 5.42 0.00 41.36 2.73
903 905 8.841444 TCGAAATAAAGAATATTGCTTCTTGC 57.159 30.769 0.00 0.00 43.05 4.01
904 906 8.677300 TCGAAATAAAGAATATTGCTTCTTGCT 58.323 29.630 0.00 0.00 43.05 3.91
905 907 9.294030 CGAAATAAAGAATATTGCTTCTTGCTT 57.706 29.630 0.00 0.00 43.05 3.91
989 991 2.194201 ATTGGGTCAATTTCGACGGT 57.806 45.000 0.00 0.00 36.73 4.83
994 996 1.136057 GGTCAATTTCGACGGTCTTGC 60.136 52.381 6.57 1.37 36.73 4.01
1069 1087 0.912006 AGTTGGCCTCTCCCTCTTCC 60.912 60.000 3.32 0.00 0.00 3.46
1070 1088 1.160870 TTGGCCTCTCCCTCTTCCA 59.839 57.895 3.32 0.00 0.00 3.53
1442 1475 1.898574 CGCTTGCCCTGTCCAGTTT 60.899 57.895 0.00 0.00 0.00 2.66
1449 1482 0.951040 CCCTGTCCAGTTTCAGACGC 60.951 60.000 0.00 0.00 35.71 5.19
1461 1494 1.621992 TCAGACGCACCTTCTTCTCT 58.378 50.000 0.00 0.00 0.00 3.10
1476 1509 3.610619 CTCTGTGTGCGATGCCCCA 62.611 63.158 0.00 0.00 0.00 4.96
1479 1512 2.672996 GTGTGCGATGCCCCAAGT 60.673 61.111 0.00 0.00 0.00 3.16
1500 1533 2.456119 GGACGAGGTGCTTGATGCG 61.456 63.158 0.00 0.00 46.63 4.73
1518 1551 1.379576 GGGGAGCTGCAGCAATCTT 60.380 57.895 38.24 19.47 45.16 2.40
1546 1579 0.460635 GCTCAGCAGCCTTGAGAGAG 60.461 60.000 14.42 1.28 43.75 3.20
1596 1629 1.070445 CTTGGCCAGCTATCCTCGG 59.930 63.158 5.11 0.00 0.00 4.63
1630 1663 3.251487 ACCTTACAGCGCGTATTTGTTTT 59.749 39.130 8.43 0.00 0.00 2.43
1631 1664 3.602062 CCTTACAGCGCGTATTTGTTTTG 59.398 43.478 8.43 0.00 0.00 2.44
1665 1698 0.829602 TTGGCCGGCAGATGGAAAAA 60.830 50.000 30.85 4.78 0.00 1.94
1703 1736 0.326264 CTGCTTTGTAGGGAGGCTGT 59.674 55.000 0.00 0.00 0.00 4.40
1704 1737 0.036732 TGCTTTGTAGGGAGGCTGTG 59.963 55.000 0.00 0.00 0.00 3.66
1731 1764 3.497884 AAGTCTGGGTGTGCTGCCC 62.498 63.158 0.00 4.22 46.26 5.36
1737 1770 2.419057 GGGTGTGCTGCCCATAATC 58.581 57.895 0.00 0.00 45.40 1.75
1755 1788 4.500116 GGTCCAGCGAGAGTCGGC 62.500 72.222 0.00 1.45 40.84 5.54
1845 1878 3.055167 TCTTCAGCGGGAATGATCTCAAA 60.055 43.478 0.00 0.00 34.32 2.69
1875 1908 3.651423 ACTTGGCCACTCTAAAAGGTAGT 59.349 43.478 3.88 0.00 0.00 2.73
2040 2073 0.601558 TACTCACCAGCCGTTCAGAC 59.398 55.000 0.00 0.00 0.00 3.51
2084 2117 4.511082 GGCAGAGTCTCTTATGCTGAAATC 59.489 45.833 11.19 0.00 38.71 2.17
2159 2192 1.207791 AACCCTGGTGAGCATCCTAG 58.792 55.000 0.00 0.00 0.00 3.02
2161 2194 1.340399 CCCTGGTGAGCATCCTAGCA 61.340 60.000 0.00 0.00 36.85 3.49
2188 2221 2.839632 TCGGCATGGAGATCGCCT 60.840 61.111 17.00 0.00 43.95 5.52
2255 2288 5.645497 GCTTACTGAGAACCAATCTTGACAT 59.355 40.000 0.00 0.00 38.96 3.06
2258 2291 6.114187 ACTGAGAACCAATCTTGACATACA 57.886 37.500 0.00 0.00 38.96 2.29
2463 2496 0.693622 TTCCCAGGATAACGGCACAA 59.306 50.000 0.00 0.00 0.00 3.33
2478 2511 2.362077 GGCACAAGATGTTTTGTCTGGT 59.638 45.455 0.00 0.00 39.17 4.00
2480 2513 3.066621 GCACAAGATGTTTTGTCTGGTCA 59.933 43.478 0.00 0.00 39.17 4.02
2532 2565 4.699192 TGGAGGTCCAGGATACCG 57.301 61.111 0.00 0.00 42.01 4.02
2552 2585 0.107654 CCCTGCTACACCTACTTGGC 60.108 60.000 0.00 0.00 40.22 4.52
2602 2635 1.214589 GCGGTGCTCGGTAAGAAGA 59.785 57.895 2.61 0.00 39.69 2.87
2636 2669 5.036737 GGACAGGATTTGATGTAAAATGCG 58.963 41.667 0.00 0.00 41.29 4.73
2838 2875 4.216257 GCTTACAAGCCAGATTGACAGAAA 59.784 41.667 2.12 0.00 46.20 2.52
3004 3044 1.400142 GCAATTACCGCACTGCACATA 59.600 47.619 1.11 0.00 34.87 2.29
3005 3045 2.033299 GCAATTACCGCACTGCACATAT 59.967 45.455 1.11 0.00 34.87 1.78
3006 3046 3.249799 GCAATTACCGCACTGCACATATA 59.750 43.478 1.11 0.00 34.87 0.86
3060 3105 2.464459 GCAGGGTCAGCGCACATAC 61.464 63.158 11.47 1.01 0.00 2.39
3106 3310 6.267817 CCCATATGCAACACAAACTCTATTG 58.732 40.000 0.00 0.00 36.37 1.90
3177 3382 4.349663 TTCGTAGCCCAAATCAAATTCG 57.650 40.909 0.00 0.00 0.00 3.34
3332 3676 5.757850 AGACATGAGTTTCAAACAAGGAC 57.242 39.130 2.41 0.00 0.00 3.85
3334 3678 3.315191 ACATGAGTTTCAAACAAGGACGG 59.685 43.478 2.41 0.00 0.00 4.79
3367 3712 2.288666 CCAGGGACCGTTATTGACATG 58.711 52.381 0.00 0.00 0.00 3.21
3376 3722 5.242434 ACCGTTATTGACATGCTAGAACAA 58.758 37.500 0.00 0.00 0.00 2.83
3377 3723 5.121768 ACCGTTATTGACATGCTAGAACAAC 59.878 40.000 0.00 0.00 0.00 3.32
3378 3724 5.121611 CCGTTATTGACATGCTAGAACAACA 59.878 40.000 0.00 0.00 0.00 3.33
3379 3725 6.183360 CCGTTATTGACATGCTAGAACAACAT 60.183 38.462 0.00 0.00 0.00 2.71
3380 3726 7.243487 CGTTATTGACATGCTAGAACAACATT 58.757 34.615 0.00 0.00 0.00 2.71
3471 3817 1.379443 TCCTGCCAGATCCGTACGT 60.379 57.895 15.21 0.00 0.00 3.57
3484 3830 7.365741 CAGATCCGTACGTACTAATTACCAAT 58.634 38.462 22.55 3.86 0.00 3.16
3488 3834 7.715657 TCCGTACGTACTAATTACCAATCAAT 58.284 34.615 22.55 0.00 0.00 2.57
3489 3835 8.845227 TCCGTACGTACTAATTACCAATCAATA 58.155 33.333 22.55 0.00 0.00 1.90
3490 3836 9.462174 CCGTACGTACTAATTACCAATCAATAA 57.538 33.333 22.55 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.747898 CAAGTAGGATATATACAACTCTCTCCT 57.252 37.037 0.00 3.43 36.01 3.69
2 3 8.463607 GCAAGTAGGATATATACAACTCTCTCC 58.536 40.741 0.00 0.00 0.00 3.71
4 5 9.019656 CAGCAAGTAGGATATATACAACTCTCT 57.980 37.037 0.00 0.00 0.00 3.10
5 6 7.757624 GCAGCAAGTAGGATATATACAACTCTC 59.242 40.741 0.00 0.00 0.00 3.20
6 7 7.233553 TGCAGCAAGTAGGATATATACAACTCT 59.766 37.037 0.00 0.00 0.00 3.24
22 23 6.155827 GTGAAAATATGGTTTGCAGCAAGTA 58.844 36.000 8.12 0.00 33.01 2.24
23 24 4.990426 GTGAAAATATGGTTTGCAGCAAGT 59.010 37.500 8.12 0.00 33.01 3.16
66 67 2.915659 AGCGTGGACGGAACTGGA 60.916 61.111 0.71 0.00 40.23 3.86
81 82 4.743644 GCTTTTTGCATATCTGAATCCAGC 59.256 41.667 0.00 0.00 42.31 4.85
82 83 5.977725 CAGCTTTTTGCATATCTGAATCCAG 59.022 40.000 0.00 0.00 45.94 3.86
83 84 5.163488 CCAGCTTTTTGCATATCTGAATCCA 60.163 40.000 0.00 0.00 45.94 3.41
84 85 5.068198 TCCAGCTTTTTGCATATCTGAATCC 59.932 40.000 0.00 0.00 45.94 3.01
85 86 6.140303 TCCAGCTTTTTGCATATCTGAATC 57.860 37.500 0.00 0.00 45.94 2.52
86 87 6.726490 ATCCAGCTTTTTGCATATCTGAAT 57.274 33.333 0.00 0.00 45.94 2.57
87 88 6.153170 TGAATCCAGCTTTTTGCATATCTGAA 59.847 34.615 0.00 0.00 45.94 3.02
88 89 5.653330 TGAATCCAGCTTTTTGCATATCTGA 59.347 36.000 0.00 0.00 45.94 3.27
89 90 5.898174 TGAATCCAGCTTTTTGCATATCTG 58.102 37.500 0.00 0.00 45.94 2.90
90 91 5.889853 TCTGAATCCAGCTTTTTGCATATCT 59.110 36.000 0.00 0.00 45.94 1.98
91 92 6.140303 TCTGAATCCAGCTTTTTGCATATC 57.860 37.500 0.00 0.00 45.94 1.63
92 93 6.726490 ATCTGAATCCAGCTTTTTGCATAT 57.274 33.333 0.00 0.00 45.94 1.78
93 94 7.654568 CATATCTGAATCCAGCTTTTTGCATA 58.345 34.615 0.00 0.00 45.94 3.14
94 95 6.513180 CATATCTGAATCCAGCTTTTTGCAT 58.487 36.000 0.00 0.00 45.94 3.96
95 96 5.680408 GCATATCTGAATCCAGCTTTTTGCA 60.680 40.000 0.00 0.00 45.94 4.08
96 97 4.743644 GCATATCTGAATCCAGCTTTTTGC 59.256 41.667 0.00 0.00 40.20 3.68
97 98 5.898174 TGCATATCTGAATCCAGCTTTTTG 58.102 37.500 0.00 0.00 40.20 2.44
98 99 6.534475 TTGCATATCTGAATCCAGCTTTTT 57.466 33.333 0.00 0.00 40.20 1.94
99 100 6.534475 TTTGCATATCTGAATCCAGCTTTT 57.466 33.333 0.00 0.00 40.20 2.27
100 101 6.534475 TTTTGCATATCTGAATCCAGCTTT 57.466 33.333 0.00 0.00 40.20 3.51
101 102 6.534475 TTTTTGCATATCTGAATCCAGCTT 57.466 33.333 0.00 0.00 40.20 3.74
102 103 6.726490 ATTTTTGCATATCTGAATCCAGCT 57.274 33.333 0.00 0.00 40.20 4.24
124 125 4.559704 GCTAGCATCCTAAGCGTCAGTTAT 60.560 45.833 10.63 0.00 37.01 1.89
153 155 6.318396 TCTCAATTTGAGTTGTTCACATCACA 59.682 34.615 22.44 0.00 44.58 3.58
155 157 6.940831 TCTCAATTTGAGTTGTTCACATCA 57.059 33.333 22.44 0.08 44.58 3.07
198 200 6.874134 CCGAGTTTCTCCTCTTTATGAAAAGA 59.126 38.462 1.04 1.04 46.96 2.52
199 201 6.402658 GCCGAGTTTCTCCTCTTTATGAAAAG 60.403 42.308 0.00 0.00 42.99 2.27
200 202 5.411669 GCCGAGTTTCTCCTCTTTATGAAAA 59.588 40.000 0.00 0.00 31.47 2.29
201 203 4.935808 GCCGAGTTTCTCCTCTTTATGAAA 59.064 41.667 0.00 0.00 0.00 2.69
202 204 4.020573 TGCCGAGTTTCTCCTCTTTATGAA 60.021 41.667 0.00 0.00 0.00 2.57
203 205 3.513912 TGCCGAGTTTCTCCTCTTTATGA 59.486 43.478 0.00 0.00 0.00 2.15
204 206 3.861840 TGCCGAGTTTCTCCTCTTTATG 58.138 45.455 0.00 0.00 0.00 1.90
205 207 4.762289 ATGCCGAGTTTCTCCTCTTTAT 57.238 40.909 0.00 0.00 0.00 1.40
206 208 4.223032 AGAATGCCGAGTTTCTCCTCTTTA 59.777 41.667 0.00 0.00 0.00 1.85
207 209 3.008485 AGAATGCCGAGTTTCTCCTCTTT 59.992 43.478 0.00 0.00 0.00 2.52
208 210 2.569404 AGAATGCCGAGTTTCTCCTCTT 59.431 45.455 0.00 0.00 0.00 2.85
209 211 2.183679 AGAATGCCGAGTTTCTCCTCT 58.816 47.619 0.00 0.00 0.00 3.69
210 212 2.682155 AGAATGCCGAGTTTCTCCTC 57.318 50.000 0.00 0.00 0.00 3.71
211 213 3.366396 TCTAGAATGCCGAGTTTCTCCT 58.634 45.455 0.00 0.00 34.22 3.69
212 214 3.381908 TCTCTAGAATGCCGAGTTTCTCC 59.618 47.826 0.00 0.00 34.22 3.71
213 215 4.640789 TCTCTAGAATGCCGAGTTTCTC 57.359 45.455 0.00 0.00 34.22 2.87
261 263 9.436957 GGATCTGTAGAACTTCACAAAGATTTA 57.563 33.333 0.00 0.00 36.30 1.40
269 271 6.550938 ATCATGGATCTGTAGAACTTCACA 57.449 37.500 0.00 0.00 0.00 3.58
305 307 7.160547 ACCCTAAAACGGTGTTATAATTTGG 57.839 36.000 0.00 0.00 30.39 3.28
342 344 9.582431 TTAAGACAGCTAGTACAATATGTTGTC 57.418 33.333 11.45 4.20 45.14 3.18
350 352 9.672673 AATGACATTTAAGACAGCTAGTACAAT 57.327 29.630 0.00 0.00 0.00 2.71
351 353 9.502091 AAATGACATTTAAGACAGCTAGTACAA 57.498 29.630 11.75 0.00 0.00 2.41
352 354 9.151471 GAAATGACATTTAAGACAGCTAGTACA 57.849 33.333 13.34 0.00 31.47 2.90
353 355 8.604890 GGAAATGACATTTAAGACAGCTAGTAC 58.395 37.037 13.34 0.00 31.47 2.73
354 356 8.318412 TGGAAATGACATTTAAGACAGCTAGTA 58.682 33.333 13.34 0.00 31.47 1.82
355 357 7.168219 TGGAAATGACATTTAAGACAGCTAGT 58.832 34.615 13.34 0.00 31.47 2.57
356 358 7.615582 TGGAAATGACATTTAAGACAGCTAG 57.384 36.000 13.34 0.00 31.47 3.42
357 359 6.094048 GCTGGAAATGACATTTAAGACAGCTA 59.906 38.462 29.09 12.26 39.71 3.32
358 360 5.105997 GCTGGAAATGACATTTAAGACAGCT 60.106 40.000 29.09 7.26 39.71 4.24
359 361 5.098211 GCTGGAAATGACATTTAAGACAGC 58.902 41.667 26.12 26.12 37.97 4.40
360 362 5.183713 TGGCTGGAAATGACATTTAAGACAG 59.816 40.000 20.30 19.92 32.25 3.51
361 363 5.076182 TGGCTGGAAATGACATTTAAGACA 58.924 37.500 20.30 20.30 33.83 3.41
362 364 5.643379 TGGCTGGAAATGACATTTAAGAC 57.357 39.130 19.92 18.40 31.47 3.01
363 365 5.716228 ACATGGCTGGAAATGACATTTAAGA 59.284 36.000 19.92 6.56 29.37 2.10
364 366 5.969423 ACATGGCTGGAAATGACATTTAAG 58.031 37.500 13.34 14.09 29.37 1.85
365 367 5.999205 ACATGGCTGGAAATGACATTTAA 57.001 34.783 13.34 4.76 29.37 1.52
366 368 5.999205 AACATGGCTGGAAATGACATTTA 57.001 34.783 13.34 0.00 29.37 1.40
367 369 4.895668 AACATGGCTGGAAATGACATTT 57.104 36.364 13.24 13.24 29.37 2.32
368 370 4.895668 AAACATGGCTGGAAATGACATT 57.104 36.364 0.00 0.00 29.37 2.71
369 371 4.895668 AAAACATGGCTGGAAATGACAT 57.104 36.364 0.00 0.00 32.59 3.06
370 372 4.686191 AAAAACATGGCTGGAAATGACA 57.314 36.364 0.00 0.00 0.00 3.58
391 393 0.109723 CCCCCACACGAAAAGGAGAA 59.890 55.000 0.00 0.00 0.00 2.87
392 394 1.758592 CCCCCACACGAAAAGGAGA 59.241 57.895 0.00 0.00 0.00 3.71
411 413 3.619419 AGACGGAGGGAGTACTAAAGAC 58.381 50.000 0.00 0.00 0.00 3.01
423 425 3.933332 GACACTTATTTTGAGACGGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
424 426 4.389077 GTGACACTTATTTTGAGACGGAGG 59.611 45.833 0.00 0.00 0.00 4.30
425 427 4.389077 GGTGACACTTATTTTGAGACGGAG 59.611 45.833 5.39 0.00 0.00 4.63
426 428 4.312443 GGTGACACTTATTTTGAGACGGA 58.688 43.478 5.39 0.00 0.00 4.69
427 429 3.122948 CGGTGACACTTATTTTGAGACGG 59.877 47.826 5.39 0.00 0.00 4.79
428 430 3.985279 TCGGTGACACTTATTTTGAGACG 59.015 43.478 5.39 0.00 0.00 4.18
465 467 9.950680 CCAAAATAAATGTCGCTGATTTAGTAT 57.049 29.630 0.00 0.00 30.69 2.12
470 472 6.099341 GTCCCAAAATAAATGTCGCTGATTT 58.901 36.000 0.00 0.00 0.00 2.17
491 493 3.345508 ACCAAATTACTCCCTTCGTCC 57.654 47.619 0.00 0.00 0.00 4.79
492 494 3.439129 CCAACCAAATTACTCCCTTCGTC 59.561 47.826 0.00 0.00 0.00 4.20
496 498 7.865530 AATTTACCAACCAAATTACTCCCTT 57.134 32.000 0.00 0.00 34.61 3.95
505 507 7.553504 AGCCTTCTAAATTTACCAACCAAAT 57.446 32.000 0.00 0.00 0.00 2.32
515 517 6.951198 TGTCCCAATCAAGCCTTCTAAATTTA 59.049 34.615 0.00 0.00 0.00 1.40
524 526 2.905415 TCATGTCCCAATCAAGCCTT 57.095 45.000 0.00 0.00 0.00 4.35
568 570 1.681327 GCACACCTAGACGGAGGGA 60.681 63.158 5.42 0.00 41.36 4.20
569 571 1.541310 TTGCACACCTAGACGGAGGG 61.541 60.000 5.42 0.00 41.36 4.30
570 572 0.108615 CTTGCACACCTAGACGGAGG 60.109 60.000 0.00 0.00 42.89 4.30
571 573 0.603569 ACTTGCACACCTAGACGGAG 59.396 55.000 0.00 0.00 36.31 4.63
572 574 0.601558 GACTTGCACACCTAGACGGA 59.398 55.000 0.00 0.00 36.31 4.69
573 575 0.317160 TGACTTGCACACCTAGACGG 59.683 55.000 0.00 0.00 39.35 4.79
574 576 2.094494 AGATGACTTGCACACCTAGACG 60.094 50.000 0.00 0.00 0.00 4.18
575 577 3.601443 AGATGACTTGCACACCTAGAC 57.399 47.619 0.00 0.00 0.00 2.59
576 578 4.526650 TGTAAGATGACTTGCACACCTAGA 59.473 41.667 0.00 0.00 42.08 2.43
577 579 4.820897 TGTAAGATGACTTGCACACCTAG 58.179 43.478 0.00 0.00 42.08 3.02
578 580 4.882842 TGTAAGATGACTTGCACACCTA 57.117 40.909 0.00 0.00 42.08 3.08
579 581 3.769739 TGTAAGATGACTTGCACACCT 57.230 42.857 0.00 0.00 42.08 4.00
580 582 4.829064 TTTGTAAGATGACTTGCACACC 57.171 40.909 0.00 0.00 45.36 4.16
581 583 6.917477 TGATTTTTGTAAGATGACTTGCACAC 59.083 34.615 0.00 0.00 45.36 3.82
582 584 7.036996 TGATTTTTGTAAGATGACTTGCACA 57.963 32.000 0.00 0.00 45.36 4.57
583 585 7.928908 TTGATTTTTGTAAGATGACTTGCAC 57.071 32.000 0.00 0.00 45.36 4.57
597 599 9.625747 AGTGTTTTGGGATTATTTGATTTTTGT 57.374 25.926 0.00 0.00 0.00 2.83
603 605 8.458843 CGTCTAAGTGTTTTGGGATTATTTGAT 58.541 33.333 0.00 0.00 0.00 2.57
604 606 7.574217 GCGTCTAAGTGTTTTGGGATTATTTGA 60.574 37.037 0.00 0.00 0.00 2.69
605 607 6.526674 GCGTCTAAGTGTTTTGGGATTATTTG 59.473 38.462 0.00 0.00 0.00 2.32
606 608 6.617879 GCGTCTAAGTGTTTTGGGATTATTT 58.382 36.000 0.00 0.00 0.00 1.40
607 609 5.163794 CGCGTCTAAGTGTTTTGGGATTATT 60.164 40.000 0.00 0.00 0.00 1.40
608 610 4.331717 CGCGTCTAAGTGTTTTGGGATTAT 59.668 41.667 0.00 0.00 0.00 1.28
609 611 3.680937 CGCGTCTAAGTGTTTTGGGATTA 59.319 43.478 0.00 0.00 0.00 1.75
610 612 2.482721 CGCGTCTAAGTGTTTTGGGATT 59.517 45.455 0.00 0.00 0.00 3.01
611 613 2.073816 CGCGTCTAAGTGTTTTGGGAT 58.926 47.619 0.00 0.00 0.00 3.85
612 614 1.068895 TCGCGTCTAAGTGTTTTGGGA 59.931 47.619 5.77 0.00 0.00 4.37
613 615 1.504359 TCGCGTCTAAGTGTTTTGGG 58.496 50.000 5.77 0.00 0.00 4.12
614 616 2.724839 GCATCGCGTCTAAGTGTTTTGG 60.725 50.000 5.77 0.00 0.00 3.28
615 617 2.096466 TGCATCGCGTCTAAGTGTTTTG 60.096 45.455 5.77 0.00 0.00 2.44
616 618 2.139917 TGCATCGCGTCTAAGTGTTTT 58.860 42.857 5.77 0.00 0.00 2.43
617 619 1.790755 TGCATCGCGTCTAAGTGTTT 58.209 45.000 5.77 0.00 0.00 2.83
618 620 2.010145 ATGCATCGCGTCTAAGTGTT 57.990 45.000 5.77 0.00 0.00 3.32
619 621 2.010145 AATGCATCGCGTCTAAGTGT 57.990 45.000 5.77 0.00 0.00 3.55
620 622 3.551890 AGTTAATGCATCGCGTCTAAGTG 59.448 43.478 5.77 0.00 0.00 3.16
621 623 3.782046 AGTTAATGCATCGCGTCTAAGT 58.218 40.909 5.77 0.00 0.00 2.24
622 624 4.504461 AGAAGTTAATGCATCGCGTCTAAG 59.496 41.667 5.77 0.00 0.00 2.18
623 625 4.430007 AGAAGTTAATGCATCGCGTCTAA 58.570 39.130 5.77 0.00 0.00 2.10
624 626 4.041740 AGAAGTTAATGCATCGCGTCTA 57.958 40.909 5.77 0.00 0.00 2.59
625 627 2.893637 AGAAGTTAATGCATCGCGTCT 58.106 42.857 5.77 3.83 0.00 4.18
626 628 3.060473 GGTAGAAGTTAATGCATCGCGTC 60.060 47.826 5.77 1.44 0.00 5.19
627 629 2.864343 GGTAGAAGTTAATGCATCGCGT 59.136 45.455 5.77 0.00 0.00 6.01
628 630 3.123804 AGGTAGAAGTTAATGCATCGCG 58.876 45.455 0.00 0.00 0.00 5.87
629 631 3.182572 CGAGGTAGAAGTTAATGCATCGC 59.817 47.826 0.00 0.00 29.54 4.58
630 632 4.360563 ACGAGGTAGAAGTTAATGCATCG 58.639 43.478 0.00 9.89 40.35 3.84
631 633 6.535508 AGAAACGAGGTAGAAGTTAATGCATC 59.464 38.462 0.00 0.00 0.00 3.91
632 634 6.407202 AGAAACGAGGTAGAAGTTAATGCAT 58.593 36.000 0.00 0.00 0.00 3.96
633 635 5.790593 AGAAACGAGGTAGAAGTTAATGCA 58.209 37.500 0.00 0.00 0.00 3.96
634 636 6.147328 ACAAGAAACGAGGTAGAAGTTAATGC 59.853 38.462 0.00 0.00 0.00 3.56
635 637 7.653767 ACAAGAAACGAGGTAGAAGTTAATG 57.346 36.000 0.00 0.00 0.00 1.90
636 638 8.672823 AAACAAGAAACGAGGTAGAAGTTAAT 57.327 30.769 0.00 0.00 0.00 1.40
637 639 7.983484 AGAAACAAGAAACGAGGTAGAAGTTAA 59.017 33.333 0.00 0.00 0.00 2.01
638 640 7.495055 AGAAACAAGAAACGAGGTAGAAGTTA 58.505 34.615 0.00 0.00 0.00 2.24
639 641 6.346896 AGAAACAAGAAACGAGGTAGAAGTT 58.653 36.000 0.00 0.00 0.00 2.66
640 642 5.915175 AGAAACAAGAAACGAGGTAGAAGT 58.085 37.500 0.00 0.00 0.00 3.01
641 643 6.479001 TCAAGAAACAAGAAACGAGGTAGAAG 59.521 38.462 0.00 0.00 0.00 2.85
642 644 6.257193 GTCAAGAAACAAGAAACGAGGTAGAA 59.743 38.462 0.00 0.00 0.00 2.10
643 645 5.751990 GTCAAGAAACAAGAAACGAGGTAGA 59.248 40.000 0.00 0.00 0.00 2.59
644 646 5.522460 TGTCAAGAAACAAGAAACGAGGTAG 59.478 40.000 0.00 0.00 0.00 3.18
645 647 5.421277 TGTCAAGAAACAAGAAACGAGGTA 58.579 37.500 0.00 0.00 0.00 3.08
646 648 4.258543 TGTCAAGAAACAAGAAACGAGGT 58.741 39.130 0.00 0.00 0.00 3.85
647 649 4.875544 TGTCAAGAAACAAGAAACGAGG 57.124 40.909 0.00 0.00 0.00 4.63
648 650 7.796838 TGATATGTCAAGAAACAAGAAACGAG 58.203 34.615 0.00 0.00 31.81 4.18
649 651 7.722795 TGATATGTCAAGAAACAAGAAACGA 57.277 32.000 0.00 0.00 31.81 3.85
650 652 7.323656 GGTTGATATGTCAAGAAACAAGAAACG 59.676 37.037 4.98 0.00 44.58 3.60
651 653 8.134895 TGGTTGATATGTCAAGAAACAAGAAAC 58.865 33.333 4.98 0.00 44.58 2.78
652 654 8.231692 TGGTTGATATGTCAAGAAACAAGAAA 57.768 30.769 4.98 0.00 44.58 2.52
653 655 7.815840 TGGTTGATATGTCAAGAAACAAGAA 57.184 32.000 4.98 0.00 44.58 2.52
654 656 7.815840 TTGGTTGATATGTCAAGAAACAAGA 57.184 32.000 4.98 0.00 44.58 3.02
657 659 9.513906 TCTTATTGGTTGATATGTCAAGAAACA 57.486 29.630 4.98 0.63 44.58 2.83
658 660 9.994432 CTCTTATTGGTTGATATGTCAAGAAAC 57.006 33.333 4.98 0.00 44.58 2.78
659 661 9.958180 TCTCTTATTGGTTGATATGTCAAGAAA 57.042 29.630 4.98 3.84 44.58 2.52
661 663 9.551734 CATCTCTTATTGGTTGATATGTCAAGA 57.448 33.333 4.98 0.00 44.58 3.02
662 664 9.551734 TCATCTCTTATTGGTTGATATGTCAAG 57.448 33.333 4.98 0.00 44.58 3.02
663 665 9.551734 CTCATCTCTTATTGGTTGATATGTCAA 57.448 33.333 0.03 0.03 41.89 3.18
664 666 8.152898 CCTCATCTCTTATTGGTTGATATGTCA 58.847 37.037 0.00 0.00 0.00 3.58
665 667 8.370940 TCCTCATCTCTTATTGGTTGATATGTC 58.629 37.037 0.00 0.00 0.00 3.06
666 668 8.267620 TCCTCATCTCTTATTGGTTGATATGT 57.732 34.615 0.00 0.00 0.00 2.29
667 669 9.736414 ATTCCTCATCTCTTATTGGTTGATATG 57.264 33.333 0.00 0.00 0.00 1.78
668 670 9.736414 CATTCCTCATCTCTTATTGGTTGATAT 57.264 33.333 0.00 0.00 0.00 1.63
669 671 8.717717 ACATTCCTCATCTCTTATTGGTTGATA 58.282 33.333 0.00 0.00 0.00 2.15
670 672 7.580910 ACATTCCTCATCTCTTATTGGTTGAT 58.419 34.615 0.00 0.00 0.00 2.57
671 673 6.962182 ACATTCCTCATCTCTTATTGGTTGA 58.038 36.000 0.00 0.00 0.00 3.18
672 674 7.770433 TGTACATTCCTCATCTCTTATTGGTTG 59.230 37.037 0.00 0.00 0.00 3.77
673 675 7.861629 TGTACATTCCTCATCTCTTATTGGTT 58.138 34.615 0.00 0.00 0.00 3.67
674 676 7.437713 TGTACATTCCTCATCTCTTATTGGT 57.562 36.000 0.00 0.00 0.00 3.67
675 677 7.094890 GCATGTACATTCCTCATCTCTTATTGG 60.095 40.741 5.37 0.00 0.00 3.16
676 678 7.660617 AGCATGTACATTCCTCATCTCTTATTG 59.339 37.037 5.37 0.00 0.00 1.90
677 679 7.743749 AGCATGTACATTCCTCATCTCTTATT 58.256 34.615 5.37 0.00 0.00 1.40
678 680 7.313740 AGCATGTACATTCCTCATCTCTTAT 57.686 36.000 5.37 0.00 0.00 1.73
679 681 6.737720 AGCATGTACATTCCTCATCTCTTA 57.262 37.500 5.37 0.00 0.00 2.10
680 682 5.627182 AGCATGTACATTCCTCATCTCTT 57.373 39.130 5.37 0.00 0.00 2.85
681 683 5.627182 AAGCATGTACATTCCTCATCTCT 57.373 39.130 5.37 0.00 0.00 3.10
682 684 6.690194 AAAAGCATGTACATTCCTCATCTC 57.310 37.500 5.37 0.00 0.00 2.75
683 685 8.757982 ATTAAAAGCATGTACATTCCTCATCT 57.242 30.769 5.37 0.00 0.00 2.90
686 688 9.461312 AGTTATTAAAAGCATGTACATTCCTCA 57.539 29.630 5.37 0.00 0.00 3.86
693 695 9.502091 AGTCTCAAGTTATTAAAAGCATGTACA 57.498 29.630 0.00 0.00 0.00 2.90
696 698 8.947115 GGTAGTCTCAAGTTATTAAAAGCATGT 58.053 33.333 0.00 0.00 0.00 3.21
697 699 8.946085 TGGTAGTCTCAAGTTATTAAAAGCATG 58.054 33.333 0.00 0.00 0.00 4.06
698 700 9.515226 TTGGTAGTCTCAAGTTATTAAAAGCAT 57.485 29.630 0.00 0.00 0.00 3.79
699 701 8.911918 TTGGTAGTCTCAAGTTATTAAAAGCA 57.088 30.769 0.00 0.00 0.00 3.91
700 702 9.608617 GTTTGGTAGTCTCAAGTTATTAAAAGC 57.391 33.333 0.00 0.00 0.00 3.51
703 705 9.616156 TGTGTTTGGTAGTCTCAAGTTATTAAA 57.384 29.630 0.00 0.00 0.00 1.52
704 706 9.616156 TTGTGTTTGGTAGTCTCAAGTTATTAA 57.384 29.630 0.00 0.00 0.00 1.40
705 707 9.048446 GTTGTGTTTGGTAGTCTCAAGTTATTA 57.952 33.333 0.00 0.00 0.00 0.98
706 708 7.554835 TGTTGTGTTTGGTAGTCTCAAGTTATT 59.445 33.333 0.00 0.00 0.00 1.40
707 709 7.051623 TGTTGTGTTTGGTAGTCTCAAGTTAT 58.948 34.615 0.00 0.00 0.00 1.89
708 710 6.408035 TGTTGTGTTTGGTAGTCTCAAGTTA 58.592 36.000 0.00 0.00 0.00 2.24
709 711 5.250200 TGTTGTGTTTGGTAGTCTCAAGTT 58.750 37.500 0.00 0.00 0.00 2.66
710 712 4.839121 TGTTGTGTTTGGTAGTCTCAAGT 58.161 39.130 0.00 0.00 0.00 3.16
711 713 5.751680 CATGTTGTGTTTGGTAGTCTCAAG 58.248 41.667 0.00 0.00 0.00 3.02
712 714 4.036262 GCATGTTGTGTTTGGTAGTCTCAA 59.964 41.667 0.00 0.00 0.00 3.02
713 715 3.563808 GCATGTTGTGTTTGGTAGTCTCA 59.436 43.478 0.00 0.00 0.00 3.27
714 716 3.563808 TGCATGTTGTGTTTGGTAGTCTC 59.436 43.478 0.00 0.00 0.00 3.36
715 717 3.550820 TGCATGTTGTGTTTGGTAGTCT 58.449 40.909 0.00 0.00 0.00 3.24
716 718 3.315191 ACTGCATGTTGTGTTTGGTAGTC 59.685 43.478 0.00 0.00 0.00 2.59
717 719 3.066621 CACTGCATGTTGTGTTTGGTAGT 59.933 43.478 10.64 0.00 0.00 2.73
718 720 3.550639 CCACTGCATGTTGTGTTTGGTAG 60.551 47.826 15.42 0.00 32.76 3.18
719 721 2.360483 CCACTGCATGTTGTGTTTGGTA 59.640 45.455 15.42 0.00 32.76 3.25
720 722 1.136695 CCACTGCATGTTGTGTTTGGT 59.863 47.619 15.42 0.00 32.76 3.67
721 723 1.136695 ACCACTGCATGTTGTGTTTGG 59.863 47.619 15.42 6.73 32.76 3.28
722 724 2.582728 ACCACTGCATGTTGTGTTTG 57.417 45.000 15.42 6.50 32.76 2.93
723 725 3.699038 ACTAACCACTGCATGTTGTGTTT 59.301 39.130 15.42 11.62 32.76 2.83
724 726 3.287222 ACTAACCACTGCATGTTGTGTT 58.713 40.909 15.42 12.51 32.76 3.32
725 727 2.930950 ACTAACCACTGCATGTTGTGT 58.069 42.857 15.42 4.79 32.76 3.72
726 728 3.314913 TGAACTAACCACTGCATGTTGTG 59.685 43.478 11.53 11.53 0.00 3.33
727 729 3.550820 TGAACTAACCACTGCATGTTGT 58.449 40.909 6.65 0.00 0.00 3.32
728 730 4.771590 ATGAACTAACCACTGCATGTTG 57.228 40.909 6.65 0.00 0.00 3.33
729 731 4.584325 ACAATGAACTAACCACTGCATGTT 59.416 37.500 0.00 0.00 0.00 2.71
730 732 4.144297 ACAATGAACTAACCACTGCATGT 58.856 39.130 0.00 0.00 0.00 3.21
731 733 4.771590 ACAATGAACTAACCACTGCATG 57.228 40.909 0.00 0.00 0.00 4.06
732 734 5.163622 GCATACAATGAACTAACCACTGCAT 60.164 40.000 0.00 0.00 0.00 3.96
733 735 4.155826 GCATACAATGAACTAACCACTGCA 59.844 41.667 0.00 0.00 0.00 4.41
734 736 4.155826 TGCATACAATGAACTAACCACTGC 59.844 41.667 0.00 0.00 0.00 4.40
735 737 5.878332 TGCATACAATGAACTAACCACTG 57.122 39.130 0.00 0.00 0.00 3.66
768 770 8.879759 CGAGAGACCTTAATGTTTATTTGCTAA 58.120 33.333 0.00 0.00 0.00 3.09
769 771 8.038944 ACGAGAGACCTTAATGTTTATTTGCTA 58.961 33.333 0.00 0.00 0.00 3.49
770 772 6.879458 ACGAGAGACCTTAATGTTTATTTGCT 59.121 34.615 0.00 0.00 0.00 3.91
771 773 7.073342 ACGAGAGACCTTAATGTTTATTTGC 57.927 36.000 0.00 0.00 0.00 3.68
772 774 9.893305 AAAACGAGAGACCTTAATGTTTATTTG 57.107 29.630 0.00 0.00 0.00 2.32
774 776 9.503399 AGAAAACGAGAGACCTTAATGTTTATT 57.497 29.630 0.00 0.00 0.00 1.40
775 777 9.152595 GAGAAAACGAGAGACCTTAATGTTTAT 57.847 33.333 0.00 0.00 0.00 1.40
776 778 7.601508 GGAGAAAACGAGAGACCTTAATGTTTA 59.398 37.037 0.00 0.00 0.00 2.01
777 779 6.427242 GGAGAAAACGAGAGACCTTAATGTTT 59.573 38.462 0.00 0.00 0.00 2.83
778 780 5.932883 GGAGAAAACGAGAGACCTTAATGTT 59.067 40.000 0.00 0.00 0.00 2.71
779 781 5.246429 AGGAGAAAACGAGAGACCTTAATGT 59.754 40.000 0.00 0.00 0.00 2.71
780 782 5.725362 AGGAGAAAACGAGAGACCTTAATG 58.275 41.667 0.00 0.00 0.00 1.90
781 783 5.105269 GGAGGAGAAAACGAGAGACCTTAAT 60.105 44.000 0.00 0.00 0.00 1.40
782 784 4.220163 GGAGGAGAAAACGAGAGACCTTAA 59.780 45.833 0.00 0.00 0.00 1.85
783 785 3.762823 GGAGGAGAAAACGAGAGACCTTA 59.237 47.826 0.00 0.00 0.00 2.69
784 786 2.563620 GGAGGAGAAAACGAGAGACCTT 59.436 50.000 0.00 0.00 0.00 3.50
785 787 2.172679 GGAGGAGAAAACGAGAGACCT 58.827 52.381 0.00 0.00 0.00 3.85
786 788 2.164827 GAGGAGGAGAAAACGAGAGACC 59.835 54.545 0.00 0.00 0.00 3.85
787 789 2.164827 GGAGGAGGAGAAAACGAGAGAC 59.835 54.545 0.00 0.00 0.00 3.36
788 790 2.041891 AGGAGGAGGAGAAAACGAGAGA 59.958 50.000 0.00 0.00 0.00 3.10
789 791 2.452505 AGGAGGAGGAGAAAACGAGAG 58.547 52.381 0.00 0.00 0.00 3.20
790 792 2.563179 CAAGGAGGAGGAGAAAACGAGA 59.437 50.000 0.00 0.00 0.00 4.04
791 793 2.354203 CCAAGGAGGAGGAGAAAACGAG 60.354 54.545 0.00 0.00 41.22 4.18
792 794 1.623811 CCAAGGAGGAGGAGAAAACGA 59.376 52.381 0.00 0.00 41.22 3.85
793 795 1.348036 ACCAAGGAGGAGGAGAAAACG 59.652 52.381 0.00 0.00 41.22 3.60
794 796 2.372172 TGACCAAGGAGGAGGAGAAAAC 59.628 50.000 0.00 0.00 41.22 2.43
795 797 2.701551 TGACCAAGGAGGAGGAGAAAA 58.298 47.619 0.00 0.00 41.22 2.29
796 798 2.415983 TGACCAAGGAGGAGGAGAAA 57.584 50.000 0.00 0.00 41.22 2.52
797 799 2.191400 CATGACCAAGGAGGAGGAGAA 58.809 52.381 0.00 0.00 41.22 2.87
798 800 1.623557 CCATGACCAAGGAGGAGGAGA 60.624 57.143 0.00 0.00 41.22 3.71
799 801 0.835941 CCATGACCAAGGAGGAGGAG 59.164 60.000 0.00 0.00 41.22 3.69
800 802 0.119155 ACCATGACCAAGGAGGAGGA 59.881 55.000 0.00 0.00 41.22 3.71
801 803 0.254178 CACCATGACCAAGGAGGAGG 59.746 60.000 0.00 0.00 41.22 4.30
802 804 0.393537 GCACCATGACCAAGGAGGAG 60.394 60.000 0.00 0.00 41.22 3.69
803 805 1.133181 TGCACCATGACCAAGGAGGA 61.133 55.000 0.00 0.00 41.22 3.71
804 806 0.962356 GTGCACCATGACCAAGGAGG 60.962 60.000 5.22 0.00 45.67 4.30
805 807 0.250858 TGTGCACCATGACCAAGGAG 60.251 55.000 15.69 0.00 0.00 3.69
806 808 0.184692 TTGTGCACCATGACCAAGGA 59.815 50.000 15.69 0.00 0.00 3.36
807 809 0.314935 GTTGTGCACCATGACCAAGG 59.685 55.000 15.69 0.00 0.00 3.61
808 810 0.314935 GGTTGTGCACCATGACCAAG 59.685 55.000 15.69 0.00 46.42 3.61
809 811 2.424474 GGTTGTGCACCATGACCAA 58.576 52.632 15.69 0.00 46.42 3.67
810 812 4.172625 GGTTGTGCACCATGACCA 57.827 55.556 15.69 0.00 46.42 4.02
818 820 6.017440 TGAGTAAGTCATTTTAGGTTGTGCAC 60.017 38.462 10.75 10.75 0.00 4.57
819 821 6.017440 GTGAGTAAGTCATTTTAGGTTGTGCA 60.017 38.462 0.00 0.00 37.56 4.57
820 822 6.371389 GTGAGTAAGTCATTTTAGGTTGTGC 58.629 40.000 0.00 0.00 37.56 4.57
821 823 6.710744 AGGTGAGTAAGTCATTTTAGGTTGTG 59.289 38.462 0.00 0.00 37.56 3.33
822 824 6.838382 AGGTGAGTAAGTCATTTTAGGTTGT 58.162 36.000 0.00 0.00 37.56 3.32
823 825 8.311836 TCTAGGTGAGTAAGTCATTTTAGGTTG 58.688 37.037 0.00 0.00 37.56 3.77
824 826 8.312564 GTCTAGGTGAGTAAGTCATTTTAGGTT 58.687 37.037 0.00 0.00 37.56 3.50
825 827 7.362747 CGTCTAGGTGAGTAAGTCATTTTAGGT 60.363 40.741 0.00 0.00 37.56 3.08
826 828 6.973474 CGTCTAGGTGAGTAAGTCATTTTAGG 59.027 42.308 0.00 0.00 37.56 2.69
827 829 6.973474 CCGTCTAGGTGAGTAAGTCATTTTAG 59.027 42.308 0.00 0.00 37.56 1.85
828 830 6.660521 TCCGTCTAGGTGAGTAAGTCATTTTA 59.339 38.462 0.00 0.00 41.99 1.52
829 831 5.479375 TCCGTCTAGGTGAGTAAGTCATTTT 59.521 40.000 0.00 0.00 41.99 1.82
830 832 5.014858 TCCGTCTAGGTGAGTAAGTCATTT 58.985 41.667 0.00 0.00 41.99 2.32
831 833 4.597004 TCCGTCTAGGTGAGTAAGTCATT 58.403 43.478 0.00 0.00 41.99 2.57
832 834 4.200874 CTCCGTCTAGGTGAGTAAGTCAT 58.799 47.826 0.00 0.00 41.99 3.06
833 835 3.607741 CTCCGTCTAGGTGAGTAAGTCA 58.392 50.000 0.00 0.00 41.99 3.41
834 836 2.944349 CCTCCGTCTAGGTGAGTAAGTC 59.056 54.545 0.00 0.00 41.99 3.01
835 837 2.356947 CCCTCCGTCTAGGTGAGTAAGT 60.357 54.545 0.00 0.00 41.99 2.24
836 838 2.092538 TCCCTCCGTCTAGGTGAGTAAG 60.093 54.545 0.00 0.00 41.99 2.34
837 839 1.918262 TCCCTCCGTCTAGGTGAGTAA 59.082 52.381 0.00 0.00 41.99 2.24
838 840 1.489649 CTCCCTCCGTCTAGGTGAGTA 59.510 57.143 0.00 0.00 41.99 2.59
839 841 0.256464 CTCCCTCCGTCTAGGTGAGT 59.744 60.000 0.00 0.00 41.99 3.41
840 842 0.256464 ACTCCCTCCGTCTAGGTGAG 59.744 60.000 0.00 0.00 41.99 3.51
841 843 1.211457 GTACTCCCTCCGTCTAGGTGA 59.789 57.143 0.00 0.00 41.99 4.02
842 844 1.064906 TGTACTCCCTCCGTCTAGGTG 60.065 57.143 0.00 0.00 41.99 4.00
843 845 1.293062 TGTACTCCCTCCGTCTAGGT 58.707 55.000 0.00 0.00 41.99 3.08
844 846 2.660670 ATGTACTCCCTCCGTCTAGG 57.339 55.000 0.00 0.00 42.97 3.02
845 847 5.340439 AAAAATGTACTCCCTCCGTCTAG 57.660 43.478 0.00 0.00 0.00 2.43
936 938 9.765795 TGAGAAGAAGGTGTTTTTGTTTAAAAA 57.234 25.926 0.00 0.00 41.96 1.94
937 939 9.198837 GTGAGAAGAAGGTGTTTTTGTTTAAAA 57.801 29.630 0.00 0.00 34.13 1.52
939 941 8.026607 CAGTGAGAAGAAGGTGTTTTTGTTTAA 58.973 33.333 0.00 0.00 0.00 1.52
940 942 7.175990 ACAGTGAGAAGAAGGTGTTTTTGTTTA 59.824 33.333 0.00 0.00 0.00 2.01
941 943 6.015434 ACAGTGAGAAGAAGGTGTTTTTGTTT 60.015 34.615 0.00 0.00 0.00 2.83
943 945 5.010282 ACAGTGAGAAGAAGGTGTTTTTGT 58.990 37.500 0.00 0.00 0.00 2.83
944 946 5.567138 ACAGTGAGAAGAAGGTGTTTTTG 57.433 39.130 0.00 0.00 0.00 2.44
945 947 4.332819 CGACAGTGAGAAGAAGGTGTTTTT 59.667 41.667 0.00 0.00 0.00 1.94
947 949 3.118738 ACGACAGTGAGAAGAAGGTGTTT 60.119 43.478 0.00 0.00 0.00 2.83
948 950 2.431057 ACGACAGTGAGAAGAAGGTGTT 59.569 45.455 0.00 0.00 0.00 3.32
949 951 2.032620 ACGACAGTGAGAAGAAGGTGT 58.967 47.619 0.00 0.00 0.00 4.16
950 952 2.802787 ACGACAGTGAGAAGAAGGTG 57.197 50.000 0.00 0.00 0.00 4.00
951 953 4.322049 CCAATACGACAGTGAGAAGAAGGT 60.322 45.833 0.00 0.00 0.00 3.50
952 954 4.177026 CCAATACGACAGTGAGAAGAAGG 58.823 47.826 0.00 0.00 0.00 3.46
953 955 4.177026 CCCAATACGACAGTGAGAAGAAG 58.823 47.826 0.00 0.00 0.00 2.85
954 956 3.576982 ACCCAATACGACAGTGAGAAGAA 59.423 43.478 0.00 0.00 0.00 2.52
955 957 3.162666 ACCCAATACGACAGTGAGAAGA 58.837 45.455 0.00 0.00 0.00 2.87
956 958 3.056821 TGACCCAATACGACAGTGAGAAG 60.057 47.826 0.00 0.00 0.00 2.85
957 959 2.894765 TGACCCAATACGACAGTGAGAA 59.105 45.455 0.00 0.00 0.00 2.87
958 960 2.521126 TGACCCAATACGACAGTGAGA 58.479 47.619 0.00 0.00 0.00 3.27
989 991 2.729360 CGTCGTAACATTGACAGCAAGA 59.271 45.455 0.00 0.00 37.45 3.02
994 996 1.990563 GACCCGTCGTAACATTGACAG 59.009 52.381 0.00 0.00 34.78 3.51
1001 1003 1.892338 GGATGGACCCGTCGTAACA 59.108 57.895 2.47 0.00 33.03 2.41
1022 1040 1.802880 CGGGTTGAGGCATAGAAGTCG 60.803 57.143 0.00 0.00 0.00 4.18
1069 1087 6.208204 GGGATAGATGAATCCACCAAAGAATG 59.792 42.308 5.32 0.00 46.29 2.67
1070 1088 6.126097 TGGGATAGATGAATCCACCAAAGAAT 60.126 38.462 5.32 0.00 46.29 2.40
1442 1475 1.270826 CAGAGAAGAAGGTGCGTCTGA 59.729 52.381 0.00 0.00 34.57 3.27
1449 1482 1.143305 CGCACACAGAGAAGAAGGTG 58.857 55.000 0.00 0.00 37.29 4.00
1461 1494 2.118233 TACTTGGGGCATCGCACACA 62.118 55.000 0.00 0.00 35.49 3.72
1476 1509 1.899814 TCAAGCACCTCGTCCATACTT 59.100 47.619 0.00 0.00 0.00 2.24
1479 1512 1.473257 GCATCAAGCACCTCGTCCATA 60.473 52.381 0.00 0.00 44.79 2.74
1486 1519 2.825836 CCCCGCATCAAGCACCTC 60.826 66.667 0.00 0.00 46.13 3.85
1487 1520 3.329889 TCCCCGCATCAAGCACCT 61.330 61.111 0.00 0.00 46.13 4.00
1500 1533 1.379576 AAGATTGCTGCAGCTCCCC 60.380 57.895 36.61 22.67 42.66 4.81
1518 1551 2.850439 GCTGCTGAGCATCTTGTCA 58.150 52.632 7.94 0.00 45.46 3.58
1546 1579 1.741706 CTCCTGCATGTCACCAATCAC 59.258 52.381 0.00 0.00 0.00 3.06
1596 1629 0.539986 TGTAAGGTTGCCGGGAGATC 59.460 55.000 2.18 0.00 0.00 2.75
1630 1663 3.088532 GGCCAAACATAACCTGATCACA 58.911 45.455 0.00 0.00 0.00 3.58
1631 1664 2.097466 CGGCCAAACATAACCTGATCAC 59.903 50.000 2.24 0.00 0.00 3.06
1665 1698 5.118642 GCAGAAAGCTCAAAATTGTCTCT 57.881 39.130 0.00 0.00 41.15 3.10
1703 1736 1.630369 CACCCAGACTTCCATTCCTCA 59.370 52.381 0.00 0.00 0.00 3.86
1704 1737 1.630878 ACACCCAGACTTCCATTCCTC 59.369 52.381 0.00 0.00 0.00 3.71
1731 1764 1.338337 ACTCTCGCTGGACCGATTATG 59.662 52.381 0.00 0.00 36.54 1.90
1737 1770 4.180946 CCGACTCTCGCTGGACCG 62.181 72.222 0.00 0.00 38.82 4.79
1755 1788 4.512944 ACATGCTCAACAAGTGTACTCTTG 59.487 41.667 27.74 27.74 46.89 3.02
1845 1878 4.599036 GTGGCCAAGTTTCCACCT 57.401 55.556 7.24 0.00 45.26 4.00
1875 1908 3.076621 GTTCTGATGCTTGATCACACCA 58.923 45.455 0.00 0.00 36.06 4.17
2040 2073 4.153117 GCCGTTCCTAATGATGCTATCTTG 59.847 45.833 0.00 0.00 0.00 3.02
2255 2288 1.225855 CACTCTGCGCCAAAACTGTA 58.774 50.000 4.18 0.00 0.00 2.74
2258 2291 3.034030 GCACTCTGCGCCAAAACT 58.966 55.556 4.18 0.00 31.71 2.66
2359 2392 1.745087 GGCCATTGTCCACATGTACAG 59.255 52.381 0.00 0.00 0.00 2.74
2463 2496 5.236478 CGTAACTTGACCAGACAAAACATCT 59.764 40.000 0.00 0.00 0.00 2.90
2478 2511 2.960384 TGTCCCTTCAGACGTAACTTGA 59.040 45.455 0.00 0.00 39.77 3.02
2480 2513 4.562963 GGAATGTCCCTTCAGACGTAACTT 60.563 45.833 0.00 0.00 39.77 2.66
2532 2565 0.107654 CCAAGTAGGTGTAGCAGGGC 60.108 60.000 0.00 0.00 0.00 5.19
2552 2585 2.418333 CGTGACACGACGAAGCTCG 61.418 63.158 23.39 4.36 46.05 5.03
2602 2635 0.639392 ATCCTGTCCTGCCTAGACCT 59.361 55.000 0.00 0.00 33.09 3.85
2647 2680 5.106712 ACGTGCACTTTGTAATCACATTAGG 60.107 40.000 16.19 0.00 33.76 2.69
2659 2692 2.614829 AGGTAAGACGTGCACTTTGT 57.385 45.000 16.19 5.31 0.00 2.83
2748 2784 0.320374 TTCAGTACTCGGCTTGTGGG 59.680 55.000 0.00 0.00 0.00 4.61
3029 3069 2.746904 TGACCCTGCATTGTATTGAACG 59.253 45.455 0.00 0.00 0.00 3.95
3060 3105 2.158842 CCAGGCTCCATCCTAGTTCAAG 60.159 54.545 0.00 0.00 33.95 3.02
3106 3310 8.840867 GTCAACGATAAATGAATTGACTGAAAC 58.159 33.333 7.90 0.00 43.68 2.78
3177 3382 6.700081 TCTCATGTTATTCCAGTACGCAATAC 59.300 38.462 0.00 0.00 0.00 1.89
3244 3577 9.555411 TCTGCCTATGTCTTTATATAACCCATA 57.445 33.333 0.00 2.17 0.00 2.74
3260 3604 5.132648 TGGAATACCTGATTTCTGCCTATGT 59.867 40.000 0.00 0.00 37.04 2.29
3262 3606 5.912149 TGGAATACCTGATTTCTGCCTAT 57.088 39.130 0.00 0.00 37.04 2.57
3263 3607 5.397899 CCTTGGAATACCTGATTTCTGCCTA 60.398 44.000 0.00 0.00 37.04 3.93
3332 3676 1.949525 CCCTGGTTATGCTTGATTCCG 59.050 52.381 0.00 0.00 0.00 4.30
3334 3678 2.952310 GGTCCCTGGTTATGCTTGATTC 59.048 50.000 0.00 0.00 0.00 2.52
3367 3712 7.625828 ACCCTAAATGTAATGTTGTTCTAGC 57.374 36.000 0.00 0.00 0.00 3.42
3376 3722 7.785506 AGAGCTAGACTACCCTAAATGTAATGT 59.214 37.037 0.00 0.00 0.00 2.71
3377 3723 8.085296 CAGAGCTAGACTACCCTAAATGTAATG 58.915 40.741 0.00 0.00 0.00 1.90
3378 3724 7.233757 CCAGAGCTAGACTACCCTAAATGTAAT 59.766 40.741 0.00 0.00 0.00 1.89
3379 3725 6.550108 CCAGAGCTAGACTACCCTAAATGTAA 59.450 42.308 0.00 0.00 0.00 2.41
3380 3726 6.069331 CCAGAGCTAGACTACCCTAAATGTA 58.931 44.000 0.00 0.00 0.00 2.29
3471 3817 9.454585 CGACGACTTATTGATTGGTAATTAGTA 57.545 33.333 0.00 0.00 30.27 1.82
3484 3830 1.816835 ACCTCTGCGACGACTTATTGA 59.183 47.619 0.00 0.00 0.00 2.57
3488 3834 0.803117 CTGACCTCTGCGACGACTTA 59.197 55.000 0.00 0.00 0.00 2.24
3489 3835 1.581954 CTGACCTCTGCGACGACTT 59.418 57.895 0.00 0.00 0.00 3.01
3490 3836 2.336478 CCTGACCTCTGCGACGACT 61.336 63.158 0.00 0.00 0.00 4.18
3492 3838 3.062466 CCCTGACCTCTGCGACGA 61.062 66.667 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.