Multiple sequence alignment - TraesCS3B01G318600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G318600 chr3B 100.000 7183 0 0 1 7183 513573044 513565862 0.000000e+00 13265.0
1 TraesCS3B01G318600 chr3B 95.122 123 4 2 5478 5598 454671494 454671372 7.350000e-45 193.0
2 TraesCS3B01G318600 chr3D 96.969 4850 73 31 646 5446 393661039 393656215 0.000000e+00 8074.0
3 TraesCS3B01G318600 chr3D 92.881 1517 43 16 5587 7085 393656110 393654641 0.000000e+00 2143.0
4 TraesCS3B01G318600 chr3D 93.448 290 9 8 368 648 393661729 393661441 8.620000e-114 422.0
5 TraesCS3B01G318600 chr3D 97.753 89 1 1 44 132 393661811 393661724 1.250000e-32 152.0
6 TraesCS3B01G318600 chr3D 95.062 81 4 0 7103 7183 393650739 393650659 2.100000e-25 128.0
7 TraesCS3B01G318600 chr3A 97.936 2616 20 9 2809 5399 513608898 513606292 0.000000e+00 4501.0
8 TraesCS3B01G318600 chr3A 92.993 2469 74 44 369 2772 513611331 513608897 0.000000e+00 3509.0
9 TraesCS3B01G318600 chr3A 96.643 983 10 3 5587 6554 513605899 513604925 0.000000e+00 1611.0
10 TraesCS3B01G318600 chr3A 92.308 182 13 1 7003 7183 513586624 513586443 2.570000e-64 257.0
11 TraesCS3B01G318600 chr3A 94.656 131 4 2 1 128 513611466 513611336 4.390000e-47 200.0
12 TraesCS3B01G318600 chr3A 94.355 124 4 3 5474 5596 152176492 152176371 3.420000e-43 187.0
13 TraesCS3B01G318600 chr3A 95.082 61 0 2 5388 5446 513606261 513606202 7.670000e-15 93.5
14 TraesCS3B01G318600 chrUn 87.345 403 29 12 4627 5011 30199119 30199517 6.610000e-120 442.0
15 TraesCS3B01G318600 chrUn 87.320 347 26 10 4627 4961 32406716 32406376 1.460000e-101 381.0
16 TraesCS3B01G318600 chr7A 87.709 358 28 7 4627 4971 128971686 128972040 3.120000e-108 403.0
17 TraesCS3B01G318600 chr7A 94.488 127 4 3 5471 5596 560407041 560407165 7.350000e-45 193.0
18 TraesCS3B01G318600 chr7A 93.750 128 5 3 5470 5596 442347791 442347666 9.510000e-44 189.0
19 TraesCS3B01G318600 chr7A 94.355 124 4 3 5474 5596 352030747 352030626 3.420000e-43 187.0
20 TraesCS3B01G318600 chr7A 84.000 200 26 5 5248 5446 540057478 540057672 3.420000e-43 187.0
21 TraesCS3B01G318600 chr7A 84.000 200 26 5 5248 5446 540104475 540104669 3.420000e-43 187.0
22 TraesCS3B01G318600 chr7A 89.286 84 8 1 5008 5090 85209319 85209402 3.540000e-18 104.0
23 TraesCS3B01G318600 chr2D 95.984 249 9 1 123 371 267844112 267843865 3.120000e-108 403.0
24 TraesCS3B01G318600 chr2D 92.405 79 6 0 5011 5089 440590234 440590156 5.890000e-21 113.0
25 TraesCS3B01G318600 chr2B 95.951 247 10 0 124 370 298615010 298615256 1.120000e-107 401.0
26 TraesCS3B01G318600 chr2B 95.510 245 11 0 126 370 402649321 402649565 6.760000e-105 392.0
27 TraesCS3B01G318600 chr7B 96.296 243 7 2 129 370 144148955 144148714 1.450000e-106 398.0
28 TraesCS3B01G318600 chr7B 89.286 84 8 1 5006 5088 212411807 212411890 3.540000e-18 104.0
29 TraesCS3B01G318600 chr2A 96.281 242 9 0 129 370 81994780 81994539 1.450000e-106 398.0
30 TraesCS3B01G318600 chr4B 96.281 242 8 1 129 369 649586235 649585994 5.220000e-106 396.0
31 TraesCS3B01G318600 chr4B 95.510 245 11 0 126 370 110370473 110370717 6.760000e-105 392.0
32 TraesCS3B01G318600 chr4B 93.750 80 4 1 5008 5086 472388185 472388264 1.270000e-22 119.0
33 TraesCS3B01G318600 chr5B 95.510 245 11 0 126 370 194289466 194289710 6.760000e-105 392.0
34 TraesCS3B01G318600 chr1B 95.868 242 9 1 129 369 39730385 39730144 2.430000e-104 390.0
35 TraesCS3B01G318600 chr1B 87.640 89 9 2 5006 5093 67444564 67444651 1.270000e-17 102.0
36 TraesCS3B01G318600 chr4A 94.488 127 4 3 5471 5596 127407652 127407776 7.350000e-45 193.0
37 TraesCS3B01G318600 chr4A 94.488 127 4 3 5471 5596 386088119 386088243 7.350000e-45 193.0
38 TraesCS3B01G318600 chr1A 94.355 124 4 3 5474 5596 134973602 134973481 3.420000e-43 187.0
39 TraesCS3B01G318600 chr1A 94.355 124 4 3 5474 5596 154418144 154418023 3.420000e-43 187.0
40 TraesCS3B01G318600 chr6B 88.764 89 10 0 5253 5341 191368603 191368691 7.620000e-20 110.0
41 TraesCS3B01G318600 chr7D 88.636 88 8 2 5008 5093 106921347 106921434 9.860000e-19 106.0
42 TraesCS3B01G318600 chr5A 88.235 85 10 0 5002 5086 582390141 582390225 1.270000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G318600 chr3B 513565862 513573044 7182 True 13265.0 13265 100.0000 1 7183 1 chr3B.!!$R2 7182
1 TraesCS3B01G318600 chr3D 393650659 393661811 11152 True 2183.8 8074 95.2226 44 7183 5 chr3D.!!$R1 7139
2 TraesCS3B01G318600 chr3A 513604925 513611466 6541 True 1982.9 4501 95.4620 1 6554 5 chr3A.!!$R3 6553

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
459 475 0.902531 TGAGCGGAAGGAAAGGGTAG 59.097 55.000 0.00 0.00 0.00 3.18 F
1742 2229 0.328258 CCCGACCCAAGATGAGGTTT 59.672 55.000 0.00 0.00 36.17 3.27 F
2023 2524 3.054276 CTAACGCTGGAGTTAGTCTCG 57.946 52.381 13.45 0.00 45.04 4.04 F
3327 3850 1.610522 GCAGACAATTTGCAGGACACT 59.389 47.619 0.00 0.00 41.17 3.55 F
5498 6345 0.329261 TCTACTCCCTCCGTTCGGAA 59.671 55.000 14.79 0.04 33.41 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2159 2660 1.480954 CGGCACATAGGTTAGGTCACT 59.519 52.381 0.00 0.00 0.00 3.41 R
3327 3850 2.029828 GTCAGAAGAGAGAAAGGCGACA 60.030 50.000 0.00 0.00 0.00 4.35 R
4741 5264 9.959749 GTAAAAGTTTGAACTGGATTGTCAATA 57.040 29.630 0.00 0.00 39.66 1.90 R
5571 6418 0.033796 ATGTACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55 R
6880 7742 0.370273 GCGCTCTGTAATGAACCACG 59.630 55.000 0.00 0.00 0.00 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.573829 CTTTAACTGCCGGCGCAAGA 61.574 55.000 23.90 1.77 46.66 3.02
52 56 4.670227 AGATTCACGCTCTTACTTTTGC 57.330 40.909 0.00 0.00 0.00 3.68
128 132 0.997196 GGCCGCAGTTTTCTACTACG 59.003 55.000 0.00 0.00 42.16 3.51
129 133 1.670967 GGCCGCAGTTTTCTACTACGT 60.671 52.381 0.00 0.00 41.16 3.57
130 134 2.415893 GGCCGCAGTTTTCTACTACGTA 60.416 50.000 0.00 0.00 41.16 3.57
132 136 3.671702 GCCGCAGTTTTCTACTACGTACT 60.672 47.826 0.00 0.00 41.16 2.73
133 137 4.094212 CCGCAGTTTTCTACTACGTACTC 58.906 47.826 0.00 0.00 41.16 2.59
134 138 4.094212 CGCAGTTTTCTACTACGTACTCC 58.906 47.826 0.00 0.00 38.54 3.85
135 139 4.419280 GCAGTTTTCTACTACGTACTCCC 58.581 47.826 0.00 0.00 34.56 4.30
136 140 4.157472 GCAGTTTTCTACTACGTACTCCCT 59.843 45.833 0.00 0.00 34.56 4.20
137 141 5.675827 GCAGTTTTCTACTACGTACTCCCTC 60.676 48.000 0.00 0.00 34.56 4.30
138 142 4.946772 AGTTTTCTACTACGTACTCCCTCC 59.053 45.833 0.00 0.00 34.56 4.30
139 143 4.851639 TTTCTACTACGTACTCCCTCCT 57.148 45.455 0.00 0.00 0.00 3.69
140 144 4.851639 TTCTACTACGTACTCCCTCCTT 57.148 45.455 0.00 0.00 0.00 3.36
141 145 4.851639 TCTACTACGTACTCCCTCCTTT 57.148 45.455 0.00 0.00 0.00 3.11
142 146 4.775236 TCTACTACGTACTCCCTCCTTTC 58.225 47.826 0.00 0.00 0.00 2.62
143 147 3.446442 ACTACGTACTCCCTCCTTTCA 57.554 47.619 0.00 0.00 0.00 2.69
144 148 3.978610 ACTACGTACTCCCTCCTTTCAT 58.021 45.455 0.00 0.00 0.00 2.57
145 149 3.952967 ACTACGTACTCCCTCCTTTCATC 59.047 47.826 0.00 0.00 0.00 2.92
146 150 3.103080 ACGTACTCCCTCCTTTCATCT 57.897 47.619 0.00 0.00 0.00 2.90
147 151 4.246712 ACGTACTCCCTCCTTTCATCTA 57.753 45.455 0.00 0.00 0.00 1.98
148 152 4.805744 ACGTACTCCCTCCTTTCATCTAT 58.194 43.478 0.00 0.00 0.00 1.98
149 153 5.950023 ACGTACTCCCTCCTTTCATCTATA 58.050 41.667 0.00 0.00 0.00 1.31
150 154 6.553857 ACGTACTCCCTCCTTTCATCTATAT 58.446 40.000 0.00 0.00 0.00 0.86
151 155 7.696981 ACGTACTCCCTCCTTTCATCTATATA 58.303 38.462 0.00 0.00 0.00 0.86
152 156 7.830201 ACGTACTCCCTCCTTTCATCTATATAG 59.170 40.741 3.10 3.10 0.00 1.31
153 157 7.283580 CGTACTCCCTCCTTTCATCTATATAGG 59.716 44.444 9.89 0.00 0.00 2.57
154 158 6.507568 ACTCCCTCCTTTCATCTATATAGGG 58.492 44.000 9.89 0.00 43.23 3.53
155 159 5.281314 TCCCTCCTTTCATCTATATAGGGC 58.719 45.833 9.89 0.00 41.88 5.19
156 160 4.410555 CCCTCCTTTCATCTATATAGGGCC 59.589 50.000 9.89 0.00 36.30 5.80
157 161 5.284582 CCTCCTTTCATCTATATAGGGCCT 58.715 45.833 12.58 12.58 0.00 5.19
158 162 6.444704 CCTCCTTTCATCTATATAGGGCCTA 58.555 44.000 17.16 17.16 0.00 3.93
159 163 6.903534 CCTCCTTTCATCTATATAGGGCCTAA 59.096 42.308 18.91 7.61 0.00 2.69
160 164 7.570607 CCTCCTTTCATCTATATAGGGCCTAAT 59.429 40.741 18.91 14.19 0.00 1.73
161 165 8.324191 TCCTTTCATCTATATAGGGCCTAATG 57.676 38.462 18.91 15.78 0.00 1.90
162 166 7.906736 TCCTTTCATCTATATAGGGCCTAATGT 59.093 37.037 18.91 9.02 0.00 2.71
163 167 7.989741 CCTTTCATCTATATAGGGCCTAATGTG 59.010 40.741 18.91 10.70 0.00 3.21
164 168 8.449423 TTTCATCTATATAGGGCCTAATGTGT 57.551 34.615 18.91 2.76 0.00 3.72
165 169 8.449423 TTCATCTATATAGGGCCTAATGTGTT 57.551 34.615 18.91 1.94 0.00 3.32
166 170 8.449423 TCATCTATATAGGGCCTAATGTGTTT 57.551 34.615 18.91 1.12 0.00 2.83
167 171 8.890472 TCATCTATATAGGGCCTAATGTGTTTT 58.110 33.333 18.91 0.30 0.00 2.43
168 172 9.520515 CATCTATATAGGGCCTAATGTGTTTTT 57.479 33.333 18.91 0.00 0.00 1.94
173 177 5.977489 AGGGCCTAATGTGTTTTTAAGAC 57.023 39.130 2.82 0.00 0.00 3.01
174 178 4.770531 AGGGCCTAATGTGTTTTTAAGACC 59.229 41.667 2.82 0.00 0.00 3.85
175 179 4.380128 GGGCCTAATGTGTTTTTAAGACCG 60.380 45.833 0.84 0.00 0.00 4.79
176 180 4.163552 GCCTAATGTGTTTTTAAGACCGC 58.836 43.478 0.00 0.00 0.00 5.68
177 181 4.729595 CCTAATGTGTTTTTAAGACCGCC 58.270 43.478 0.00 0.00 0.00 6.13
178 182 4.457949 CCTAATGTGTTTTTAAGACCGCCT 59.542 41.667 0.00 0.00 0.00 5.52
179 183 4.929819 AATGTGTTTTTAAGACCGCCTT 57.070 36.364 0.00 0.00 38.87 4.35
180 184 4.929819 ATGTGTTTTTAAGACCGCCTTT 57.070 36.364 0.00 0.00 36.34 3.11
181 185 6.394025 AATGTGTTTTTAAGACCGCCTTTA 57.606 33.333 0.00 0.00 36.34 1.85
182 186 5.831702 TGTGTTTTTAAGACCGCCTTTAA 57.168 34.783 0.00 0.00 36.34 1.52
183 187 5.580661 TGTGTTTTTAAGACCGCCTTTAAC 58.419 37.500 0.00 0.00 36.34 2.01
184 188 5.357596 TGTGTTTTTAAGACCGCCTTTAACT 59.642 36.000 0.00 0.00 36.34 2.24
185 189 6.541641 TGTGTTTTTAAGACCGCCTTTAACTA 59.458 34.615 0.00 0.00 36.34 2.24
186 190 7.229106 TGTGTTTTTAAGACCGCCTTTAACTAT 59.771 33.333 0.00 0.00 36.34 2.12
187 191 8.077991 GTGTTTTTAAGACCGCCTTTAACTATT 58.922 33.333 0.00 0.00 36.34 1.73
188 192 8.077386 TGTTTTTAAGACCGCCTTTAACTATTG 58.923 33.333 0.00 0.00 36.34 1.90
189 193 7.982761 TTTTAAGACCGCCTTTAACTATTGA 57.017 32.000 0.00 0.00 36.34 2.57
190 194 6.973229 TTAAGACCGCCTTTAACTATTGAC 57.027 37.500 0.00 0.00 36.34 3.18
191 195 4.546829 AGACCGCCTTTAACTATTGACA 57.453 40.909 0.00 0.00 0.00 3.58
192 196 4.901868 AGACCGCCTTTAACTATTGACAA 58.098 39.130 0.00 0.00 0.00 3.18
193 197 4.935808 AGACCGCCTTTAACTATTGACAAG 59.064 41.667 0.00 0.00 0.00 3.16
194 198 4.901868 ACCGCCTTTAACTATTGACAAGA 58.098 39.130 0.00 0.00 0.00 3.02
195 199 5.497474 ACCGCCTTTAACTATTGACAAGAT 58.503 37.500 0.00 0.00 0.00 2.40
196 200 5.944007 ACCGCCTTTAACTATTGACAAGATT 59.056 36.000 0.00 0.00 0.00 2.40
197 201 7.107542 ACCGCCTTTAACTATTGACAAGATTA 58.892 34.615 0.00 0.00 0.00 1.75
198 202 7.608761 ACCGCCTTTAACTATTGACAAGATTAA 59.391 33.333 0.00 0.00 0.00 1.40
199 203 8.621286 CCGCCTTTAACTATTGACAAGATTAAT 58.379 33.333 0.00 0.00 0.00 1.40
208 212 9.836864 ACTATTGACAAGATTAATAGCACATGA 57.163 29.630 0.00 0.00 37.72 3.07
210 214 7.920160 TTGACAAGATTAATAGCACATGACA 57.080 32.000 0.00 0.00 0.00 3.58
211 215 8.510243 TTGACAAGATTAATAGCACATGACAT 57.490 30.769 0.00 0.00 0.00 3.06
212 216 7.922837 TGACAAGATTAATAGCACATGACATG 58.077 34.615 14.02 14.02 0.00 3.21
213 217 6.732154 ACAAGATTAATAGCACATGACATGC 58.268 36.000 15.49 4.01 43.74 4.06
214 218 6.319405 ACAAGATTAATAGCACATGACATGCA 59.681 34.615 15.49 0.00 45.92 3.96
215 219 6.309712 AGATTAATAGCACATGACATGCAC 57.690 37.500 15.49 7.69 45.92 4.57
216 220 5.824097 AGATTAATAGCACATGACATGCACA 59.176 36.000 15.49 0.00 45.92 4.57
217 221 5.893897 TTAATAGCACATGACATGCACAA 57.106 34.783 15.49 0.00 45.92 3.33
218 222 4.994907 AATAGCACATGACATGCACAAT 57.005 36.364 15.49 2.15 45.92 2.71
219 223 2.647529 AGCACATGACATGCACAATG 57.352 45.000 15.49 6.95 45.92 2.82
235 239 9.524106 CATGCACAATGTGAAAGTTATATCATT 57.476 29.630 18.66 0.00 35.23 2.57
236 240 8.914328 TGCACAATGTGAAAGTTATATCATTG 57.086 30.769 18.66 12.16 43.99 2.82
237 241 8.738106 TGCACAATGTGAAAGTTATATCATTGA 58.262 29.630 18.66 0.00 42.28 2.57
238 242 9.571810 GCACAATGTGAAAGTTATATCATTGAA 57.428 29.630 18.66 0.00 42.28 2.69
244 248 8.677300 TGTGAAAGTTATATCATTGAAAGCTCC 58.323 33.333 0.00 0.00 0.00 4.70
245 249 8.897752 GTGAAAGTTATATCATTGAAAGCTCCT 58.102 33.333 0.00 0.00 0.00 3.69
246 250 9.466497 TGAAAGTTATATCATTGAAAGCTCCTT 57.534 29.630 0.00 0.00 0.00 3.36
255 259 2.670401 GAAAGCTCCTTTCACACACG 57.330 50.000 11.65 0.00 46.23 4.49
256 260 2.210116 GAAAGCTCCTTTCACACACGA 58.790 47.619 11.65 0.00 46.23 4.35
257 261 2.325583 AAGCTCCTTTCACACACGAA 57.674 45.000 0.00 0.00 0.00 3.85
258 262 2.550830 AGCTCCTTTCACACACGAAT 57.449 45.000 0.00 0.00 0.00 3.34
259 263 2.851195 AGCTCCTTTCACACACGAATT 58.149 42.857 0.00 0.00 0.00 2.17
260 264 3.214328 AGCTCCTTTCACACACGAATTT 58.786 40.909 0.00 0.00 0.00 1.82
261 265 4.385825 AGCTCCTTTCACACACGAATTTA 58.614 39.130 0.00 0.00 0.00 1.40
262 266 4.819630 AGCTCCTTTCACACACGAATTTAA 59.180 37.500 0.00 0.00 0.00 1.52
263 267 4.909880 GCTCCTTTCACACACGAATTTAAC 59.090 41.667 0.00 0.00 0.00 2.01
264 268 5.085636 TCCTTTCACACACGAATTTAACG 57.914 39.130 0.00 0.00 0.00 3.18
265 269 4.809958 TCCTTTCACACACGAATTTAACGA 59.190 37.500 0.00 0.00 34.70 3.85
266 270 4.901881 CCTTTCACACACGAATTTAACGAC 59.098 41.667 0.00 0.00 34.70 4.34
267 271 3.756780 TCACACACGAATTTAACGACG 57.243 42.857 0.00 0.00 34.70 5.12
268 272 3.114809 TCACACACGAATTTAACGACGT 58.885 40.909 0.00 0.00 39.53 4.34
271 275 2.848562 CACGAATTTAACGACGTGCT 57.151 45.000 0.00 0.00 46.38 4.40
272 276 3.163642 CACGAATTTAACGACGTGCTT 57.836 42.857 0.00 0.00 46.38 3.91
273 277 3.537806 CACGAATTTAACGACGTGCTTT 58.462 40.909 0.00 0.00 46.38 3.51
274 278 3.353767 CACGAATTTAACGACGTGCTTTG 59.646 43.478 0.00 0.00 46.38 2.77
275 279 3.001533 ACGAATTTAACGACGTGCTTTGT 59.998 39.130 0.00 0.53 37.58 2.83
276 280 3.353767 CGAATTTAACGACGTGCTTTGTG 59.646 43.478 0.00 0.00 0.00 3.33
277 281 3.955771 ATTTAACGACGTGCTTTGTGT 57.044 38.095 0.00 0.00 0.00 3.72
278 282 5.406767 AATTTAACGACGTGCTTTGTGTA 57.593 34.783 0.00 0.00 0.00 2.90
279 283 4.854361 TTTAACGACGTGCTTTGTGTAA 57.146 36.364 0.00 0.00 0.00 2.41
280 284 4.440851 TTAACGACGTGCTTTGTGTAAG 57.559 40.909 0.00 0.00 36.90 2.34
281 285 1.930567 ACGACGTGCTTTGTGTAAGT 58.069 45.000 0.00 0.00 36.19 2.24
282 286 2.273557 ACGACGTGCTTTGTGTAAGTT 58.726 42.857 0.00 0.00 36.19 2.66
283 287 2.029970 ACGACGTGCTTTGTGTAAGTTG 59.970 45.455 0.00 0.00 36.19 3.16
284 288 2.372350 GACGTGCTTTGTGTAAGTTGC 58.628 47.619 0.00 0.00 36.19 4.17
285 289 1.740585 ACGTGCTTTGTGTAAGTTGCA 59.259 42.857 0.00 0.00 36.19 4.08
286 290 2.357637 ACGTGCTTTGTGTAAGTTGCAT 59.642 40.909 0.00 0.00 36.19 3.96
287 291 2.720578 CGTGCTTTGTGTAAGTTGCATG 59.279 45.455 0.00 0.00 36.19 4.06
288 292 3.705604 GTGCTTTGTGTAAGTTGCATGT 58.294 40.909 0.00 0.00 36.19 3.21
289 293 3.730715 GTGCTTTGTGTAAGTTGCATGTC 59.269 43.478 0.00 0.00 36.19 3.06
290 294 3.379688 TGCTTTGTGTAAGTTGCATGTCA 59.620 39.130 0.00 0.00 36.19 3.58
291 295 4.037803 TGCTTTGTGTAAGTTGCATGTCAT 59.962 37.500 0.00 0.00 36.19 3.06
292 296 5.240403 TGCTTTGTGTAAGTTGCATGTCATA 59.760 36.000 0.00 0.00 36.19 2.15
293 297 6.072008 TGCTTTGTGTAAGTTGCATGTCATAT 60.072 34.615 0.00 0.00 36.19 1.78
294 298 7.120432 TGCTTTGTGTAAGTTGCATGTCATATA 59.880 33.333 0.00 0.00 36.19 0.86
295 299 8.131100 GCTTTGTGTAAGTTGCATGTCATATAT 58.869 33.333 0.00 0.00 36.19 0.86
304 308 8.859236 AGTTGCATGTCATATATTATTGCTCT 57.141 30.769 0.00 0.00 0.00 4.09
305 309 9.948964 AGTTGCATGTCATATATTATTGCTCTA 57.051 29.630 0.00 0.00 0.00 2.43
324 328 7.985476 TGCTCTAATATTTGGTCAAAGTTAGC 58.015 34.615 17.32 13.47 35.14 3.09
325 329 7.067008 TGCTCTAATATTTGGTCAAAGTTAGCC 59.933 37.037 17.32 13.62 35.14 3.93
326 330 7.283354 GCTCTAATATTTGGTCAAAGTTAGCCT 59.717 37.037 17.32 0.41 35.14 4.58
327 331 8.732746 TCTAATATTTGGTCAAAGTTAGCCTC 57.267 34.615 17.32 0.00 35.14 4.70
328 332 6.436843 AATATTTGGTCAAAGTTAGCCTCG 57.563 37.500 2.55 0.00 33.32 4.63
329 333 3.478857 TTTGGTCAAAGTTAGCCTCGA 57.521 42.857 0.00 0.00 0.00 4.04
330 334 3.478857 TTGGTCAAAGTTAGCCTCGAA 57.521 42.857 0.00 0.00 0.00 3.71
331 335 3.478857 TGGTCAAAGTTAGCCTCGAAA 57.521 42.857 0.00 0.00 0.00 3.46
332 336 3.811083 TGGTCAAAGTTAGCCTCGAAAA 58.189 40.909 0.00 0.00 0.00 2.29
333 337 4.200874 TGGTCAAAGTTAGCCTCGAAAAA 58.799 39.130 0.00 0.00 0.00 1.94
334 338 4.825085 TGGTCAAAGTTAGCCTCGAAAAAT 59.175 37.500 0.00 0.00 0.00 1.82
335 339 5.154222 GGTCAAAGTTAGCCTCGAAAAATG 58.846 41.667 0.00 0.00 0.00 2.32
336 340 4.617223 GTCAAAGTTAGCCTCGAAAAATGC 59.383 41.667 0.00 0.00 0.00 3.56
337 341 4.277174 TCAAAGTTAGCCTCGAAAAATGCA 59.723 37.500 0.00 0.00 0.00 3.96
338 342 5.048083 TCAAAGTTAGCCTCGAAAAATGCAT 60.048 36.000 0.00 0.00 0.00 3.96
339 343 5.391312 AAGTTAGCCTCGAAAAATGCATT 57.609 34.783 5.99 5.99 0.00 3.56
340 344 6.509418 AAGTTAGCCTCGAAAAATGCATTA 57.491 33.333 13.39 0.00 0.00 1.90
341 345 6.124088 AGTTAGCCTCGAAAAATGCATTAG 57.876 37.500 13.39 5.76 0.00 1.73
342 346 5.066505 AGTTAGCCTCGAAAAATGCATTAGG 59.933 40.000 13.39 15.86 0.00 2.69
343 347 2.099756 AGCCTCGAAAAATGCATTAGGC 59.900 45.455 30.44 30.44 46.67 3.93
344 348 2.799562 GCCTCGAAAAATGCATTAGGCC 60.800 50.000 28.65 16.53 41.73 5.19
345 349 2.689983 CCTCGAAAAATGCATTAGGCCT 59.310 45.455 13.39 11.78 43.89 5.19
346 350 3.131046 CCTCGAAAAATGCATTAGGCCTT 59.869 43.478 12.58 0.00 43.89 4.35
347 351 4.338118 CCTCGAAAAATGCATTAGGCCTTA 59.662 41.667 12.58 0.11 43.89 2.69
348 352 5.010012 CCTCGAAAAATGCATTAGGCCTTAT 59.990 40.000 12.58 3.72 43.89 1.73
349 353 6.206634 CCTCGAAAAATGCATTAGGCCTTATA 59.793 38.462 12.58 0.00 43.89 0.98
350 354 7.094205 CCTCGAAAAATGCATTAGGCCTTATAT 60.094 37.037 12.58 0.00 43.89 0.86
351 355 8.856153 TCGAAAAATGCATTAGGCCTTATATA 57.144 30.769 12.58 0.00 43.89 0.86
352 356 8.946085 TCGAAAAATGCATTAGGCCTTATATAG 58.054 33.333 12.58 0.00 43.89 1.31
353 357 8.946085 CGAAAAATGCATTAGGCCTTATATAGA 58.054 33.333 12.58 0.00 43.89 1.98
356 360 8.757982 AAATGCATTAGGCCTTATATAGATGG 57.242 34.615 12.58 0.00 43.89 3.51
357 361 7.696618 ATGCATTAGGCCTTATATAGATGGA 57.303 36.000 12.58 6.20 43.89 3.41
358 362 7.509236 TGCATTAGGCCTTATATAGATGGAA 57.491 36.000 12.58 0.00 43.89 3.53
359 363 7.568349 TGCATTAGGCCTTATATAGATGGAAG 58.432 38.462 12.58 0.00 43.89 3.46
360 364 6.995091 GCATTAGGCCTTATATAGATGGAAGG 59.005 42.308 12.58 0.00 41.26 3.46
361 365 7.147479 GCATTAGGCCTTATATAGATGGAAGGA 60.147 40.741 12.58 0.00 40.88 3.36
362 366 7.979786 TTAGGCCTTATATAGATGGAAGGAG 57.020 40.000 12.58 0.00 40.88 3.69
363 367 5.284582 AGGCCTTATATAGATGGAAGGAGG 58.715 45.833 0.00 0.00 40.88 4.30
364 368 4.410555 GGCCTTATATAGATGGAAGGAGGG 59.589 50.000 0.00 0.00 40.88 4.30
365 369 5.281314 GCCTTATATAGATGGAAGGAGGGA 58.719 45.833 3.56 0.00 40.88 4.20
366 370 5.365314 GCCTTATATAGATGGAAGGAGGGAG 59.635 48.000 3.56 0.00 40.88 4.30
367 371 6.507568 CCTTATATAGATGGAAGGAGGGAGT 58.492 44.000 0.00 0.00 40.88 3.85
371 375 3.039252 AGATGGAAGGAGGGAGTACTG 57.961 52.381 0.00 0.00 0.00 2.74
459 475 0.902531 TGAGCGGAAGGAAAGGGTAG 59.097 55.000 0.00 0.00 0.00 3.18
514 537 1.472480 CCTATCTTTTTGGTGGCGTGG 59.528 52.381 0.00 0.00 0.00 4.94
584 608 3.483587 AGGGGCACTGTACCACTG 58.516 61.111 0.00 0.00 40.31 3.66
649 679 3.737047 CGGCCTCGAAGCTGAACTAATAA 60.737 47.826 9.32 0.00 42.00 1.40
734 1169 0.938008 GAGCGAGGGCGAAATAAAGG 59.062 55.000 0.00 0.00 46.35 3.11
878 1337 4.202305 CGGCTTCCTTCAGATCCTTATCTT 60.202 45.833 0.00 0.00 40.65 2.40
987 1446 2.735772 CCATGGGGTAGAGCGCTGT 61.736 63.158 18.48 15.55 0.00 4.40
1482 1966 3.119919 CCTCCGACGTGTATAGATTAGGC 60.120 52.174 0.00 0.00 0.00 3.93
1489 1973 3.304458 CGTGTATAGATTAGGCGTGCTCA 60.304 47.826 0.00 0.00 0.00 4.26
1509 1993 2.738521 TTCGAGGTGCGCTGCTTC 60.739 61.111 9.73 6.78 40.61 3.86
1528 2012 7.226325 GCTGCTTCACATGAATATTCTCTTAGT 59.774 37.037 16.24 5.30 33.01 2.24
1529 2013 9.755804 CTGCTTCACATGAATATTCTCTTAGTA 57.244 33.333 16.24 5.58 33.01 1.82
1530 2014 9.755804 TGCTTCACATGAATATTCTCTTAGTAG 57.244 33.333 16.24 7.14 33.01 2.57
1742 2229 0.328258 CCCGACCCAAGATGAGGTTT 59.672 55.000 0.00 0.00 36.17 3.27
1760 2247 6.096141 TGAGGTTTGTGTGTGTCATTTACATT 59.904 34.615 0.00 0.00 41.10 2.71
1874 2363 4.184629 GTCCTACATGTTGAGACATCACC 58.815 47.826 2.30 0.00 44.55 4.02
1934 2427 3.610821 CGTGAACTACCGAGTGTTGATGA 60.611 47.826 0.00 0.00 35.52 2.92
1935 2428 3.673809 GTGAACTACCGAGTGTTGATGAC 59.326 47.826 0.00 0.00 35.52 3.06
1936 2429 3.572682 TGAACTACCGAGTGTTGATGACT 59.427 43.478 0.00 0.00 35.52 3.41
1938 2431 5.242171 TGAACTACCGAGTGTTGATGACTAA 59.758 40.000 0.00 0.00 35.52 2.24
1939 2432 5.717078 ACTACCGAGTGTTGATGACTAAA 57.283 39.130 0.00 0.00 33.41 1.85
1940 2433 5.710984 ACTACCGAGTGTTGATGACTAAAG 58.289 41.667 0.00 0.00 33.41 1.85
1942 2435 3.244078 ACCGAGTGTTGATGACTAAAGCA 60.244 43.478 0.00 0.00 0.00 3.91
2023 2524 3.054276 CTAACGCTGGAGTTAGTCTCG 57.946 52.381 13.45 0.00 45.04 4.04
2041 2542 5.930569 AGTCTCGGTACAACAAACCTTATTC 59.069 40.000 0.00 0.00 34.66 1.75
2159 2660 6.679392 GCAGTTTAAAAACACTAGTCTGGCAA 60.679 38.462 8.21 0.00 41.30 4.52
2362 2863 7.928706 CCTCTTATGAAGGTCTTGACGAATAAT 59.071 37.037 0.00 0.00 0.00 1.28
2476 2978 5.635280 GCTATTGCAATACTTAGCGATCTCA 59.365 40.000 15.21 0.00 36.34 3.27
3133 3656 5.593909 TGACTGTGTTGATGACCTGATTTTT 59.406 36.000 0.00 0.00 0.00 1.94
3134 3657 5.835257 ACTGTGTTGATGACCTGATTTTTG 58.165 37.500 0.00 0.00 0.00 2.44
3135 3658 5.593909 ACTGTGTTGATGACCTGATTTTTGA 59.406 36.000 0.00 0.00 0.00 2.69
3136 3659 6.266103 ACTGTGTTGATGACCTGATTTTTGAT 59.734 34.615 0.00 0.00 0.00 2.57
3137 3660 7.053316 TGTGTTGATGACCTGATTTTTGATT 57.947 32.000 0.00 0.00 0.00 2.57
3138 3661 7.499292 TGTGTTGATGACCTGATTTTTGATTT 58.501 30.769 0.00 0.00 0.00 2.17
3139 3662 7.986320 TGTGTTGATGACCTGATTTTTGATTTT 59.014 29.630 0.00 0.00 0.00 1.82
3327 3850 1.610522 GCAGACAATTTGCAGGACACT 59.389 47.619 0.00 0.00 41.17 3.55
4741 5264 4.883083 TGTCTACGAATCAAGCAAGAGTT 58.117 39.130 0.00 0.00 0.00 3.01
4980 5516 6.406692 ACAGCCGTATTTCATCAGTATAGT 57.593 37.500 0.00 0.00 0.00 2.12
5455 6104 1.229658 CCAACCTGGGGTCCTCTCT 60.230 63.158 0.00 0.00 33.12 3.10
5484 6331 5.167303 GGACCTGTCCTTTTTCATCTACT 57.833 43.478 9.11 0.00 46.16 2.57
5485 6332 5.179533 GGACCTGTCCTTTTTCATCTACTC 58.820 45.833 9.11 0.00 46.16 2.59
5486 6333 5.167303 ACCTGTCCTTTTTCATCTACTCC 57.833 43.478 0.00 0.00 0.00 3.85
5487 6334 4.019231 ACCTGTCCTTTTTCATCTACTCCC 60.019 45.833 0.00 0.00 0.00 4.30
5488 6335 4.226168 CCTGTCCTTTTTCATCTACTCCCT 59.774 45.833 0.00 0.00 0.00 4.20
5489 6336 5.422214 TGTCCTTTTTCATCTACTCCCTC 57.578 43.478 0.00 0.00 0.00 4.30
5490 6337 4.225267 TGTCCTTTTTCATCTACTCCCTCC 59.775 45.833 0.00 0.00 0.00 4.30
5491 6338 3.451178 TCCTTTTTCATCTACTCCCTCCG 59.549 47.826 0.00 0.00 0.00 4.63
5492 6339 3.197983 CCTTTTTCATCTACTCCCTCCGT 59.802 47.826 0.00 0.00 0.00 4.69
5493 6340 4.323562 CCTTTTTCATCTACTCCCTCCGTT 60.324 45.833 0.00 0.00 0.00 4.44
5494 6341 4.467198 TTTTCATCTACTCCCTCCGTTC 57.533 45.455 0.00 0.00 0.00 3.95
5495 6342 1.676746 TCATCTACTCCCTCCGTTCG 58.323 55.000 0.00 0.00 0.00 3.95
5496 6343 0.669077 CATCTACTCCCTCCGTTCGG 59.331 60.000 4.74 4.74 0.00 4.30
5497 6344 0.549950 ATCTACTCCCTCCGTTCGGA 59.450 55.000 13.34 13.34 0.00 4.55
5498 6345 0.329261 TCTACTCCCTCCGTTCGGAA 59.671 55.000 14.79 0.04 33.41 4.30
5499 6346 1.064166 TCTACTCCCTCCGTTCGGAAT 60.064 52.381 14.79 2.09 33.41 3.01
5500 6347 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
5501 6348 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5502 6349 1.755380 ACTCCCTCCGTTCGGAATTAG 59.245 52.381 14.79 13.09 33.41 1.73
5503 6350 1.755380 CTCCCTCCGTTCGGAATTAGT 59.245 52.381 14.79 0.00 33.41 2.24
5504 6351 2.167900 CTCCCTCCGTTCGGAATTAGTT 59.832 50.000 14.79 0.00 33.41 2.24
5505 6352 2.093869 TCCCTCCGTTCGGAATTAGTTG 60.094 50.000 14.79 1.97 33.41 3.16
5506 6353 2.354403 CCCTCCGTTCGGAATTAGTTGT 60.354 50.000 14.79 0.00 33.41 3.32
5507 6354 2.928116 CCTCCGTTCGGAATTAGTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5508 6355 3.368116 CCTCCGTTCGGAATTAGTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
5509 6356 3.841643 TCCGTTCGGAATTAGTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
5510 6357 2.597305 CCGTTCGGAATTAGTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
5511 6358 2.597305 CGTTCGGAATTAGTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
5512 6359 3.671433 CGTTCGGAATTAGTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
5513 6360 4.240096 GTTCGGAATTAGTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
5514 6361 4.524316 TCGGAATTAGTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
5515 6362 5.080969 TCGGAATTAGTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
5516 6363 4.868171 TCGGAATTAGTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
5517 6364 4.868171 CGGAATTAGTTGTCTCGGAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
5518 6365 5.350365 CGGAATTAGTTGTCTCGGAAATGAA 59.650 40.000 0.00 0.00 0.00 2.57
5519 6366 6.037172 CGGAATTAGTTGTCTCGGAAATGAAT 59.963 38.462 0.00 0.00 0.00 2.57
5520 6367 7.189512 GGAATTAGTTGTCTCGGAAATGAATG 58.810 38.462 0.00 0.00 0.00 2.67
5521 6368 7.148239 GGAATTAGTTGTCTCGGAAATGAATGT 60.148 37.037 0.00 0.00 0.00 2.71
5522 6369 8.786826 AATTAGTTGTCTCGGAAATGAATGTA 57.213 30.769 0.00 0.00 0.00 2.29
5523 6370 8.964476 ATTAGTTGTCTCGGAAATGAATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
5524 6371 6.910536 AGTTGTCTCGGAAATGAATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
5525 6372 6.644347 AGTTGTCTCGGAAATGAATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
5526 6373 7.782049 AGTTGTCTCGGAAATGAATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
5527 6374 7.923344 AGTTGTCTCGGAAATGAATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
5528 6375 7.582667 TGTCTCGGAAATGAATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
5529 6376 8.007405 TGTCTCGGAAATGAATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
5530 6377 7.921214 TGTCTCGGAAATGAATGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
5531 6378 8.138712 GTCTCGGAAATGAATGTATCTAGAACT 58.861 37.037 0.00 0.00 0.00 3.01
5532 6379 9.350951 TCTCGGAAATGAATGTATCTAGAACTA 57.649 33.333 0.00 0.00 0.00 2.24
5533 6380 9.967346 CTCGGAAATGAATGTATCTAGAACTAA 57.033 33.333 0.00 0.00 0.00 2.24
5558 6405 9.490379 AAAATACGTCTAGATACATCCATTTCC 57.510 33.333 0.00 0.00 0.00 3.13
5559 6406 5.122512 ACGTCTAGATACATCCATTTCCG 57.877 43.478 0.00 0.00 0.00 4.30
5560 6407 3.921021 CGTCTAGATACATCCATTTCCGC 59.079 47.826 0.00 0.00 0.00 5.54
5561 6408 3.921021 GTCTAGATACATCCATTTCCGCG 59.079 47.826 0.00 0.00 0.00 6.46
5562 6409 3.824443 TCTAGATACATCCATTTCCGCGA 59.176 43.478 8.23 0.00 0.00 5.87
5563 6410 2.755650 AGATACATCCATTTCCGCGAC 58.244 47.619 8.23 0.00 0.00 5.19
5564 6411 2.102420 AGATACATCCATTTCCGCGACA 59.898 45.455 8.23 0.00 0.00 4.35
5565 6412 2.388310 TACATCCATTTCCGCGACAA 57.612 45.000 8.23 0.00 0.00 3.18
5566 6413 1.086696 ACATCCATTTCCGCGACAAG 58.913 50.000 8.23 0.00 0.00 3.16
5567 6414 1.086696 CATCCATTTCCGCGACAAGT 58.913 50.000 8.23 0.00 0.00 3.16
5568 6415 2.276201 CATCCATTTCCGCGACAAGTA 58.724 47.619 8.23 0.00 0.00 2.24
5569 6416 2.459060 TCCATTTCCGCGACAAGTAA 57.541 45.000 8.23 0.00 0.00 2.24
5570 6417 2.980568 TCCATTTCCGCGACAAGTAAT 58.019 42.857 8.23 0.00 0.00 1.89
5571 6418 3.340034 TCCATTTCCGCGACAAGTAATT 58.660 40.909 8.23 0.00 0.00 1.40
5572 6419 3.372822 TCCATTTCCGCGACAAGTAATTC 59.627 43.478 8.23 0.00 0.00 2.17
5573 6420 3.486875 CCATTTCCGCGACAAGTAATTCC 60.487 47.826 8.23 0.00 0.00 3.01
5574 6421 1.352114 TTCCGCGACAAGTAATTCCG 58.648 50.000 8.23 0.00 0.00 4.30
5575 6422 0.527113 TCCGCGACAAGTAATTCCGA 59.473 50.000 8.23 0.00 0.00 4.55
5576 6423 1.067706 TCCGCGACAAGTAATTCCGAA 60.068 47.619 8.23 0.00 0.00 4.30
5577 6424 1.060122 CCGCGACAAGTAATTCCGAAC 59.940 52.381 8.23 0.00 0.00 3.95
5578 6425 1.266211 CGCGACAAGTAATTCCGAACG 60.266 52.381 0.00 0.00 0.00 3.95
5579 6426 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
5580 6427 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
5581 6428 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
5582 6429 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
5583 6430 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
5584 6431 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
5585 6432 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
5663 6510 7.277098 TGGAGACAGACAAAAATAATACGTAGC 59.723 37.037 0.08 0.00 35.01 3.58
5729 6576 6.243900 AGGGAGATAAGATGGTTGCATATTG 58.756 40.000 0.00 0.00 0.00 1.90
5751 6613 0.387622 CGCAGGACAAGCATGTTTGG 60.388 55.000 23.82 9.11 40.74 3.28
5865 6727 6.073314 AGGAGATTAACATGCCAATGCTTAT 58.927 36.000 0.00 0.00 37.29 1.73
5866 6728 6.015688 AGGAGATTAACATGCCAATGCTTATG 60.016 38.462 0.00 0.00 37.29 1.90
5867 6729 6.239120 GGAGATTAACATGCCAATGCTTATGT 60.239 38.462 0.00 0.00 36.10 2.29
5868 6730 6.509656 AGATTAACATGCCAATGCTTATGTG 58.490 36.000 0.00 0.00 35.13 3.21
5869 6731 2.589798 ACATGCCAATGCTTATGTGC 57.410 45.000 0.00 0.00 34.04 4.57
5870 6732 1.202325 ACATGCCAATGCTTATGTGCG 60.202 47.619 0.00 0.00 34.04 5.34
5871 6733 0.386476 ATGCCAATGCTTATGTGCGG 59.614 50.000 0.00 0.00 38.71 5.69
5872 6734 1.589727 GCCAATGCTTATGTGCGGC 60.590 57.895 0.00 0.00 35.36 6.53
6365 7227 3.444703 AGCTGTATCAAGAGTTAGCGG 57.555 47.619 0.00 0.00 36.36 5.52
6393 7255 3.873910 ACAGGTTAGCGTCATAGCAAAT 58.126 40.909 0.00 0.00 40.15 2.32
6460 7322 6.096673 AGGGTTTTGTACATCATTGGTTTC 57.903 37.500 0.00 0.00 0.00 2.78
6600 7462 4.811555 TCTTGTGTTGCAGTTATGTCAC 57.188 40.909 0.00 0.00 0.00 3.67
6623 7485 6.200286 CACTGTTTTAAGCGTAGAAGTTCTGA 59.800 38.462 15.90 0.00 0.00 3.27
6664 7526 6.621316 TGTTCCTTTATTAGTTTGCGTTGA 57.379 33.333 0.00 0.00 0.00 3.18
6668 7530 9.274065 GTTCCTTTATTAGTTTGCGTTGATAAG 57.726 33.333 0.00 0.00 0.00 1.73
6691 7553 5.252164 AGCTTATGTTTTTAGGGGTGTCCTA 59.748 40.000 0.00 0.00 45.98 2.94
6705 7567 5.531287 GGGGTGTCCTAATAAACTTGCATAG 59.469 44.000 0.00 0.00 0.00 2.23
6719 7581 2.361789 TGCATAGTTTTTAGGGGCGTC 58.638 47.619 0.00 0.00 0.00 5.19
6720 7582 2.026636 TGCATAGTTTTTAGGGGCGTCT 60.027 45.455 0.00 0.00 0.00 4.18
6746 7608 9.920133 TTGATAAATTTGCATAGTTTTGTAGCA 57.080 25.926 0.00 0.00 0.00 3.49
6747 7609 9.920133 TGATAAATTTGCATAGTTTTGTAGCAA 57.080 25.926 0.00 0.00 42.74 3.91
6750 7612 6.651755 ATTTGCATAGTTTTGTAGCAATGC 57.348 33.333 0.00 0.00 43.71 3.56
6751 7613 4.108699 TGCATAGTTTTGTAGCAATGCC 57.891 40.909 0.00 0.00 39.11 4.40
6752 7614 3.509184 TGCATAGTTTTGTAGCAATGCCA 59.491 39.130 0.00 0.00 39.11 4.92
6753 7615 4.021632 TGCATAGTTTTGTAGCAATGCCAA 60.022 37.500 0.00 0.00 39.11 4.52
6754 7616 4.928615 GCATAGTTTTGTAGCAATGCCAAA 59.071 37.500 0.00 3.44 34.95 3.28
6755 7617 5.581874 GCATAGTTTTGTAGCAATGCCAAAT 59.418 36.000 9.73 0.99 34.95 2.32
6756 7618 6.455913 GCATAGTTTTGTAGCAATGCCAAATG 60.456 38.462 9.73 7.03 34.95 2.32
6757 7619 3.747529 AGTTTTGTAGCAATGCCAAATGC 59.252 39.130 9.73 7.03 42.87 3.56
6758 7620 1.993542 TTGTAGCAATGCCAAATGCG 58.006 45.000 0.00 0.00 46.98 4.73
6759 7621 0.887247 TGTAGCAATGCCAAATGCGT 59.113 45.000 0.00 0.00 46.98 5.24
6760 7622 2.087646 TGTAGCAATGCCAAATGCGTA 58.912 42.857 0.00 0.00 46.98 4.42
6761 7623 2.489722 TGTAGCAATGCCAAATGCGTAA 59.510 40.909 0.00 0.00 46.98 3.18
6762 7624 2.965572 AGCAATGCCAAATGCGTAAT 57.034 40.000 0.00 0.00 46.98 1.89
6763 7625 3.249986 AGCAATGCCAAATGCGTAATT 57.750 38.095 0.00 0.00 46.98 1.40
6764 7626 3.598299 AGCAATGCCAAATGCGTAATTT 58.402 36.364 0.00 0.00 46.98 1.82
6775 7637 3.214697 TGCGTAATTTGCATGGTTCTG 57.785 42.857 0.00 0.00 37.44 3.02
6776 7638 2.556189 TGCGTAATTTGCATGGTTCTGT 59.444 40.909 0.00 0.00 37.44 3.41
6777 7639 3.753797 TGCGTAATTTGCATGGTTCTGTA 59.246 39.130 0.00 0.00 37.44 2.74
6814 7676 4.524328 ACAGGATCGTGCTGATGATGTATA 59.476 41.667 15.15 0.00 38.14 1.47
6818 7680 5.230936 GGATCGTGCTGATGATGTATATTCG 59.769 44.000 0.00 0.00 37.47 3.34
6819 7681 4.485163 TCGTGCTGATGATGTATATTCGG 58.515 43.478 0.00 0.00 0.00 4.30
6826 7688 6.037610 GCTGATGATGTATATTCGGATTTCCC 59.962 42.308 0.00 0.00 0.00 3.97
6837 7699 1.820906 GATTTCCCGGGGTTACGCC 60.821 63.158 23.50 8.51 0.00 5.68
6850 7712 2.486918 GTTACGCCTAACCAACACAGT 58.513 47.619 0.00 0.00 0.00 3.55
6851 7713 2.443887 TACGCCTAACCAACACAGTC 57.556 50.000 0.00 0.00 0.00 3.51
6852 7714 0.756903 ACGCCTAACCAACACAGTCT 59.243 50.000 0.00 0.00 0.00 3.24
6880 7742 6.714278 TCAACCCAGTACCTTAGTTATTTCC 58.286 40.000 0.00 0.00 0.00 3.13
6889 7751 5.812286 ACCTTAGTTATTTCCGTGGTTCAT 58.188 37.500 0.00 0.00 0.00 2.57
6914 7776 2.813754 AGAGCGCTATGATCTCTGACTC 59.186 50.000 11.50 0.00 39.78 3.36
6915 7777 2.551887 GAGCGCTATGATCTCTGACTCA 59.448 50.000 11.50 0.00 0.00 3.41
6993 7855 3.117663 AGCTGAAAAGGTGGACTAAACCA 60.118 43.478 0.00 0.00 40.40 3.67
7048 7910 1.949525 GGTTGCCTATGGTATGCACAG 59.050 52.381 0.00 0.00 34.16 3.66
7056 7918 1.522668 TGGTATGCACAGCACAGAAC 58.477 50.000 0.00 0.00 43.04 3.01
7124 11870 7.202016 TGAATCTTACGAAAAGTGAAAGCAT 57.798 32.000 0.00 0.00 0.00 3.79
7126 11872 6.801539 ATCTTACGAAAAGTGAAAGCATGA 57.198 33.333 0.00 0.00 0.00 3.07
7127 11873 6.801539 TCTTACGAAAAGTGAAAGCATGAT 57.198 33.333 0.00 0.00 0.00 2.45
7176 11922 2.520458 CCACCCCCTGCACTCAAA 59.480 61.111 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 3.455619 CGCAAAAGTAAGAGCGTGAAT 57.544 42.857 0.00 0.00 44.67 2.57
128 132 7.562088 CCCTATATAGATGAAAGGAGGGAGTAC 59.438 44.444 11.53 0.00 44.48 2.73
129 133 7.653503 CCCTATATAGATGAAAGGAGGGAGTA 58.346 42.308 11.53 0.00 44.48 2.59
130 134 6.507568 CCCTATATAGATGAAAGGAGGGAGT 58.492 44.000 11.53 0.00 44.48 3.85
132 136 5.281314 GCCCTATATAGATGAAAGGAGGGA 58.719 45.833 11.53 0.00 44.48 4.20
133 137 4.410555 GGCCCTATATAGATGAAAGGAGGG 59.589 50.000 11.53 3.52 44.52 4.30
134 138 5.284582 AGGCCCTATATAGATGAAAGGAGG 58.715 45.833 11.53 1.87 0.00 4.30
135 139 7.979786 TTAGGCCCTATATAGATGAAAGGAG 57.020 40.000 11.53 0.00 0.00 3.69
136 140 7.906736 ACATTAGGCCCTATATAGATGAAAGGA 59.093 37.037 11.53 0.00 0.00 3.36
137 141 7.989741 CACATTAGGCCCTATATAGATGAAAGG 59.010 40.741 11.53 3.94 0.00 3.11
138 142 8.543774 ACACATTAGGCCCTATATAGATGAAAG 58.456 37.037 11.53 4.89 0.00 2.62
139 143 8.449423 ACACATTAGGCCCTATATAGATGAAA 57.551 34.615 11.53 0.10 0.00 2.69
140 144 8.449423 AACACATTAGGCCCTATATAGATGAA 57.551 34.615 11.53 0.00 0.00 2.57
141 145 8.449423 AAACACATTAGGCCCTATATAGATGA 57.551 34.615 11.53 0.00 0.00 2.92
142 146 9.520515 AAAAACACATTAGGCCCTATATAGATG 57.479 33.333 11.53 8.07 0.00 2.90
147 151 9.350951 GTCTTAAAAACACATTAGGCCCTATAT 57.649 33.333 0.00 0.00 0.00 0.86
148 152 7.776500 GGTCTTAAAAACACATTAGGCCCTATA 59.224 37.037 0.00 0.00 0.00 1.31
149 153 6.605995 GGTCTTAAAAACACATTAGGCCCTAT 59.394 38.462 0.00 0.00 0.00 2.57
150 154 5.947566 GGTCTTAAAAACACATTAGGCCCTA 59.052 40.000 0.00 0.00 0.00 3.53
151 155 4.770531 GGTCTTAAAAACACATTAGGCCCT 59.229 41.667 0.00 0.00 0.00 5.19
152 156 4.380128 CGGTCTTAAAAACACATTAGGCCC 60.380 45.833 0.00 0.00 0.00 5.80
153 157 4.729595 CGGTCTTAAAAACACATTAGGCC 58.270 43.478 0.00 0.00 0.00 5.19
154 158 4.163552 GCGGTCTTAAAAACACATTAGGC 58.836 43.478 0.00 0.00 0.00 3.93
155 159 4.457949 AGGCGGTCTTAAAAACACATTAGG 59.542 41.667 0.00 0.00 0.00 2.69
156 160 5.622770 AGGCGGTCTTAAAAACACATTAG 57.377 39.130 0.00 0.00 0.00 1.73
157 161 6.394025 AAAGGCGGTCTTAAAAACACATTA 57.606 33.333 0.00 0.00 34.78 1.90
158 162 4.929819 AAGGCGGTCTTAAAAACACATT 57.070 36.364 0.00 0.00 33.14 2.71
159 163 4.929819 AAAGGCGGTCTTAAAAACACAT 57.070 36.364 0.00 0.00 34.78 3.21
160 164 5.357596 AGTTAAAGGCGGTCTTAAAAACACA 59.642 36.000 13.90 0.00 34.78 3.72
161 165 5.824429 AGTTAAAGGCGGTCTTAAAAACAC 58.176 37.500 13.90 0.14 34.78 3.32
162 166 7.748691 ATAGTTAAAGGCGGTCTTAAAAACA 57.251 32.000 13.90 4.86 34.78 2.83
163 167 8.291740 TCAATAGTTAAAGGCGGTCTTAAAAAC 58.708 33.333 0.00 1.45 34.78 2.43
164 168 8.291740 GTCAATAGTTAAAGGCGGTCTTAAAAA 58.708 33.333 0.00 0.00 34.78 1.94
165 169 7.444792 TGTCAATAGTTAAAGGCGGTCTTAAAA 59.555 33.333 0.00 0.00 34.78 1.52
166 170 6.935771 TGTCAATAGTTAAAGGCGGTCTTAAA 59.064 34.615 0.00 0.00 34.78 1.52
167 171 6.465948 TGTCAATAGTTAAAGGCGGTCTTAA 58.534 36.000 0.00 0.00 34.78 1.85
168 172 6.040209 TGTCAATAGTTAAAGGCGGTCTTA 57.960 37.500 0.00 0.00 34.78 2.10
169 173 4.901868 TGTCAATAGTTAAAGGCGGTCTT 58.098 39.130 0.00 0.00 37.28 3.01
170 174 4.546829 TGTCAATAGTTAAAGGCGGTCT 57.453 40.909 0.00 0.00 0.00 3.85
171 175 4.933400 TCTTGTCAATAGTTAAAGGCGGTC 59.067 41.667 0.00 0.00 0.00 4.79
172 176 4.901868 TCTTGTCAATAGTTAAAGGCGGT 58.098 39.130 0.00 0.00 0.00 5.68
173 177 6.436843 AATCTTGTCAATAGTTAAAGGCGG 57.563 37.500 0.00 0.00 0.00 6.13
182 186 9.836864 TCATGTGCTATTAATCTTGTCAATAGT 57.163 29.630 0.00 0.00 35.57 2.12
184 188 9.612066 TGTCATGTGCTATTAATCTTGTCAATA 57.388 29.630 0.00 0.00 0.00 1.90
185 189 8.510243 TGTCATGTGCTATTAATCTTGTCAAT 57.490 30.769 0.00 0.00 0.00 2.57
186 190 7.920160 TGTCATGTGCTATTAATCTTGTCAA 57.080 32.000 0.00 0.00 0.00 3.18
187 191 7.467675 GCATGTCATGTGCTATTAATCTTGTCA 60.468 37.037 14.26 0.00 39.45 3.58
188 192 6.854892 GCATGTCATGTGCTATTAATCTTGTC 59.145 38.462 14.26 0.00 39.45 3.18
189 193 6.319405 TGCATGTCATGTGCTATTAATCTTGT 59.681 34.615 14.26 0.00 42.92 3.16
190 194 6.635641 GTGCATGTCATGTGCTATTAATCTTG 59.364 38.462 14.26 0.00 42.92 3.02
191 195 6.319405 TGTGCATGTCATGTGCTATTAATCTT 59.681 34.615 14.26 0.00 42.92 2.40
192 196 5.824097 TGTGCATGTCATGTGCTATTAATCT 59.176 36.000 14.26 0.00 42.92 2.40
193 197 6.063640 TGTGCATGTCATGTGCTATTAATC 57.936 37.500 14.26 0.00 42.92 1.75
194 198 6.453926 TTGTGCATGTCATGTGCTATTAAT 57.546 33.333 14.26 0.00 42.92 1.40
195 199 5.893897 TTGTGCATGTCATGTGCTATTAA 57.106 34.783 14.26 0.00 42.92 1.40
196 200 5.357596 ACATTGTGCATGTCATGTGCTATTA 59.642 36.000 14.26 0.00 43.17 0.98
197 201 4.158949 ACATTGTGCATGTCATGTGCTATT 59.841 37.500 14.26 0.00 43.17 1.73
198 202 3.697542 ACATTGTGCATGTCATGTGCTAT 59.302 39.130 14.26 7.14 43.17 2.97
199 203 3.083293 ACATTGTGCATGTCATGTGCTA 58.917 40.909 14.26 5.30 43.17 3.49
200 204 1.890489 ACATTGTGCATGTCATGTGCT 59.110 42.857 14.26 0.00 43.17 4.40
201 205 1.989864 CACATTGTGCATGTCATGTGC 59.010 47.619 14.26 3.08 43.17 4.57
202 206 3.562567 TCACATTGTGCATGTCATGTG 57.437 42.857 14.26 17.75 43.17 3.21
203 207 4.038282 ACTTTCACATTGTGCATGTCATGT 59.962 37.500 14.26 0.00 43.17 3.21
204 208 4.552355 ACTTTCACATTGTGCATGTCATG 58.448 39.130 12.04 8.56 43.17 3.07
205 209 4.859304 ACTTTCACATTGTGCATGTCAT 57.141 36.364 12.04 0.00 43.17 3.06
206 210 4.652421 AACTTTCACATTGTGCATGTCA 57.348 36.364 12.04 0.00 43.17 3.58
207 211 8.183536 TGATATAACTTTCACATTGTGCATGTC 58.816 33.333 12.04 6.55 43.17 3.06
209 213 9.524106 AATGATATAACTTTCACATTGTGCATG 57.476 29.630 12.04 6.37 39.07 4.06
210 214 9.524106 CAATGATATAACTTTCACATTGTGCAT 57.476 29.630 12.04 3.14 39.39 3.96
211 215 8.738106 TCAATGATATAACTTTCACATTGTGCA 58.262 29.630 12.04 0.00 42.50 4.57
212 216 9.571810 TTCAATGATATAACTTTCACATTGTGC 57.428 29.630 12.04 0.00 42.50 4.57
218 222 8.677300 GGAGCTTTCAATGATATAACTTTCACA 58.323 33.333 0.00 0.00 0.00 3.58
219 223 8.897752 AGGAGCTTTCAATGATATAACTTTCAC 58.102 33.333 0.00 0.00 0.00 3.18
220 224 9.466497 AAGGAGCTTTCAATGATATAACTTTCA 57.534 29.630 0.00 0.00 0.00 2.69
236 240 2.210116 TCGTGTGTGAAAGGAGCTTTC 58.790 47.619 0.00 0.00 46.88 2.62
237 241 2.325583 TCGTGTGTGAAAGGAGCTTT 57.674 45.000 0.00 0.00 36.29 3.51
238 242 2.325583 TTCGTGTGTGAAAGGAGCTT 57.674 45.000 0.00 0.00 0.00 3.74
239 243 2.550830 ATTCGTGTGTGAAAGGAGCT 57.449 45.000 0.00 0.00 0.00 4.09
240 244 3.626028 AAATTCGTGTGTGAAAGGAGC 57.374 42.857 0.00 0.00 0.00 4.70
241 245 5.050634 TCGTTAAATTCGTGTGTGAAAGGAG 60.051 40.000 0.00 0.00 0.00 3.69
242 246 4.809958 TCGTTAAATTCGTGTGTGAAAGGA 59.190 37.500 0.00 0.00 0.00 3.36
243 247 4.901881 GTCGTTAAATTCGTGTGTGAAAGG 59.098 41.667 0.00 0.00 0.00 3.11
244 248 4.601522 CGTCGTTAAATTCGTGTGTGAAAG 59.398 41.667 0.00 0.00 0.00 2.62
245 249 4.032672 ACGTCGTTAAATTCGTGTGTGAAA 59.967 37.500 0.00 0.00 35.24 2.69
246 250 3.551082 ACGTCGTTAAATTCGTGTGTGAA 59.449 39.130 0.00 0.00 35.24 3.18
247 251 3.061073 CACGTCGTTAAATTCGTGTGTGA 60.061 43.478 14.88 0.00 45.26 3.58
248 252 3.204314 CACGTCGTTAAATTCGTGTGTG 58.796 45.455 14.88 5.88 45.26 3.82
249 253 3.492725 CACGTCGTTAAATTCGTGTGT 57.507 42.857 14.88 0.00 45.26 3.72
253 257 3.001533 ACAAAGCACGTCGTTAAATTCGT 59.998 39.130 0.00 0.00 36.99 3.85
254 258 3.353767 CACAAAGCACGTCGTTAAATTCG 59.646 43.478 0.00 0.00 0.00 3.34
255 259 4.276460 ACACAAAGCACGTCGTTAAATTC 58.724 39.130 0.00 0.00 0.00 2.17
256 260 4.281525 ACACAAAGCACGTCGTTAAATT 57.718 36.364 0.00 0.00 0.00 1.82
257 261 3.955771 ACACAAAGCACGTCGTTAAAT 57.044 38.095 0.00 0.00 0.00 1.40
258 262 4.329528 ACTTACACAAAGCACGTCGTTAAA 59.670 37.500 0.00 0.00 38.93 1.52
259 263 3.864583 ACTTACACAAAGCACGTCGTTAA 59.135 39.130 0.00 0.00 38.93 2.01
260 264 3.446799 ACTTACACAAAGCACGTCGTTA 58.553 40.909 0.00 0.00 38.93 3.18
261 265 2.273557 ACTTACACAAAGCACGTCGTT 58.726 42.857 0.00 0.00 38.93 3.85
262 266 1.930567 ACTTACACAAAGCACGTCGT 58.069 45.000 0.00 0.00 38.93 4.34
263 267 2.624766 CAACTTACACAAAGCACGTCG 58.375 47.619 0.00 0.00 38.93 5.12
264 268 2.223157 TGCAACTTACACAAAGCACGTC 60.223 45.455 0.00 0.00 38.93 4.34
265 269 1.740585 TGCAACTTACACAAAGCACGT 59.259 42.857 0.00 0.00 38.93 4.49
266 270 2.466870 TGCAACTTACACAAAGCACG 57.533 45.000 0.00 0.00 38.93 5.34
267 271 3.705604 ACATGCAACTTACACAAAGCAC 58.294 40.909 0.00 0.00 38.93 4.40
268 272 3.379688 TGACATGCAACTTACACAAAGCA 59.620 39.130 0.00 0.00 38.93 3.91
269 273 3.963665 TGACATGCAACTTACACAAAGC 58.036 40.909 0.00 0.00 38.93 3.51
278 282 9.293404 AGAGCAATAATATATGACATGCAACTT 57.707 29.630 10.78 0.00 34.89 2.66
279 283 8.859236 AGAGCAATAATATATGACATGCAACT 57.141 30.769 10.78 7.52 34.89 3.16
298 302 8.458843 GCTAACTTTGACCAAATATTAGAGCAA 58.541 33.333 19.82 0.00 34.31 3.91
299 303 7.067008 GGCTAACTTTGACCAAATATTAGAGCA 59.933 37.037 19.82 0.00 34.31 4.26
300 304 7.283354 AGGCTAACTTTGACCAAATATTAGAGC 59.717 37.037 19.82 13.12 34.31 4.09
301 305 8.738645 AGGCTAACTTTGACCAAATATTAGAG 57.261 34.615 19.82 7.39 34.31 2.43
302 306 7.494625 CGAGGCTAACTTTGACCAAATATTAGA 59.505 37.037 19.82 0.15 34.31 2.10
303 307 7.494625 TCGAGGCTAACTTTGACCAAATATTAG 59.505 37.037 15.32 15.32 34.88 1.73
304 308 7.332557 TCGAGGCTAACTTTGACCAAATATTA 58.667 34.615 0.00 0.00 0.00 0.98
305 309 6.177610 TCGAGGCTAACTTTGACCAAATATT 58.822 36.000 0.00 0.00 0.00 1.28
306 310 5.741011 TCGAGGCTAACTTTGACCAAATAT 58.259 37.500 0.00 0.00 0.00 1.28
307 311 5.155278 TCGAGGCTAACTTTGACCAAATA 57.845 39.130 0.00 0.00 0.00 1.40
308 312 4.015872 TCGAGGCTAACTTTGACCAAAT 57.984 40.909 0.00 0.00 0.00 2.32
309 313 3.478857 TCGAGGCTAACTTTGACCAAA 57.521 42.857 0.00 0.00 0.00 3.28
310 314 3.478857 TTCGAGGCTAACTTTGACCAA 57.521 42.857 0.00 0.00 0.00 3.67
311 315 3.478857 TTTCGAGGCTAACTTTGACCA 57.521 42.857 0.00 0.00 0.00 4.02
312 316 4.823790 TTTTTCGAGGCTAACTTTGACC 57.176 40.909 0.00 0.00 0.00 4.02
313 317 4.617223 GCATTTTTCGAGGCTAACTTTGAC 59.383 41.667 0.00 0.00 0.00 3.18
314 318 4.277174 TGCATTTTTCGAGGCTAACTTTGA 59.723 37.500 0.00 0.00 0.00 2.69
315 319 4.545610 TGCATTTTTCGAGGCTAACTTTG 58.454 39.130 0.00 0.00 0.00 2.77
316 320 4.846779 TGCATTTTTCGAGGCTAACTTT 57.153 36.364 0.00 0.00 0.00 2.66
317 321 5.391312 AATGCATTTTTCGAGGCTAACTT 57.609 34.783 5.99 0.00 0.00 2.66
318 322 5.066505 CCTAATGCATTTTTCGAGGCTAACT 59.933 40.000 18.75 0.00 0.00 2.24
319 323 5.273944 CCTAATGCATTTTTCGAGGCTAAC 58.726 41.667 18.75 0.00 0.00 2.34
320 324 4.202010 GCCTAATGCATTTTTCGAGGCTAA 60.202 41.667 30.34 6.47 43.77 3.09
321 325 3.315191 GCCTAATGCATTTTTCGAGGCTA 59.685 43.478 30.34 6.91 43.77 3.93
322 326 2.099756 GCCTAATGCATTTTTCGAGGCT 59.900 45.455 30.34 4.50 43.77 4.58
323 327 2.463876 GCCTAATGCATTTTTCGAGGC 58.536 47.619 26.43 26.43 41.09 4.70
324 328 2.689983 AGGCCTAATGCATTTTTCGAGG 59.310 45.455 18.75 17.98 43.89 4.63
325 329 4.376340 AAGGCCTAATGCATTTTTCGAG 57.624 40.909 18.75 8.21 42.23 4.04
326 330 7.759489 ATATAAGGCCTAATGCATTTTTCGA 57.241 32.000 18.75 0.00 42.23 3.71
327 331 8.946085 TCTATATAAGGCCTAATGCATTTTTCG 58.054 33.333 18.75 3.96 42.23 3.46
330 334 9.193806 CCATCTATATAAGGCCTAATGCATTTT 57.806 33.333 18.75 7.88 42.23 1.82
331 335 8.560039 TCCATCTATATAAGGCCTAATGCATTT 58.440 33.333 18.75 0.21 42.23 2.32
333 337 7.696618 TCCATCTATATAAGGCCTAATGCAT 57.303 36.000 5.16 0.00 43.89 3.96
334 338 7.365921 CCTTCCATCTATATAAGGCCTAATGCA 60.366 40.741 5.16 0.00 43.89 3.96
335 339 6.995091 CCTTCCATCTATATAAGGCCTAATGC 59.005 42.308 5.16 0.00 40.16 3.56
336 340 8.324191 TCCTTCCATCTATATAAGGCCTAATG 57.676 38.462 5.16 1.68 38.70 1.90
337 341 7.570607 CCTCCTTCCATCTATATAAGGCCTAAT 59.429 40.741 5.16 2.64 38.70 1.73
338 342 6.903534 CCTCCTTCCATCTATATAAGGCCTAA 59.096 42.308 5.16 0.00 38.70 2.69
339 343 6.444704 CCTCCTTCCATCTATATAAGGCCTA 58.555 44.000 5.16 0.00 38.70 3.93
340 344 5.284582 CCTCCTTCCATCTATATAAGGCCT 58.715 45.833 0.00 0.00 38.70 5.19
341 345 4.410555 CCCTCCTTCCATCTATATAAGGCC 59.589 50.000 0.00 0.00 38.70 5.19
342 346 5.281314 TCCCTCCTTCCATCTATATAAGGC 58.719 45.833 0.00 0.00 38.70 4.35
343 347 6.507568 ACTCCCTCCTTCCATCTATATAAGG 58.492 44.000 0.00 0.00 39.93 2.69
344 348 8.340757 AGTACTCCCTCCTTCCATCTATATAAG 58.659 40.741 0.00 0.00 0.00 1.73
345 349 8.116669 CAGTACTCCCTCCTTCCATCTATATAA 58.883 40.741 0.00 0.00 0.00 0.98
346 350 7.644062 CAGTACTCCCTCCTTCCATCTATATA 58.356 42.308 0.00 0.00 0.00 0.86
347 351 6.498538 CAGTACTCCCTCCTTCCATCTATAT 58.501 44.000 0.00 0.00 0.00 0.86
348 352 5.752332 GCAGTACTCCCTCCTTCCATCTATA 60.752 48.000 0.00 0.00 0.00 1.31
349 353 4.746466 CAGTACTCCCTCCTTCCATCTAT 58.254 47.826 0.00 0.00 0.00 1.98
350 354 3.691603 GCAGTACTCCCTCCTTCCATCTA 60.692 52.174 0.00 0.00 0.00 1.98
351 355 2.957312 GCAGTACTCCCTCCTTCCATCT 60.957 54.545 0.00 0.00 0.00 2.90
352 356 1.414550 GCAGTACTCCCTCCTTCCATC 59.585 57.143 0.00 0.00 0.00 3.51
353 357 1.501582 GCAGTACTCCCTCCTTCCAT 58.498 55.000 0.00 0.00 0.00 3.41
354 358 0.617820 GGCAGTACTCCCTCCTTCCA 60.618 60.000 0.00 0.00 0.00 3.53
355 359 1.677637 CGGCAGTACTCCCTCCTTCC 61.678 65.000 0.28 0.00 0.00 3.46
356 360 0.971447 ACGGCAGTACTCCCTCCTTC 60.971 60.000 0.28 0.00 0.00 3.46
357 361 0.544595 AACGGCAGTACTCCCTCCTT 60.545 55.000 0.28 0.00 0.00 3.36
358 362 0.544595 AAACGGCAGTACTCCCTCCT 60.545 55.000 0.28 0.00 0.00 3.69
359 363 0.108281 GAAACGGCAGTACTCCCTCC 60.108 60.000 0.28 0.00 0.00 4.30
360 364 0.458025 CGAAACGGCAGTACTCCCTC 60.458 60.000 0.28 0.00 0.00 4.30
361 365 1.590147 CGAAACGGCAGTACTCCCT 59.410 57.895 0.28 0.00 0.00 4.20
362 366 1.447314 CCGAAACGGCAGTACTCCC 60.447 63.158 0.00 0.00 41.17 4.30
363 367 4.180496 CCGAAACGGCAGTACTCC 57.820 61.111 0.00 0.00 41.17 3.85
534 557 4.337274 ACCAAACCTAACCAAAAAGAGACG 59.663 41.667 0.00 0.00 0.00 4.18
584 608 1.296715 CTGCCACCACAGTAGTCCC 59.703 63.158 0.00 0.00 32.78 4.46
628 658 2.317530 ATTAGTTCAGCTTCGAGGCC 57.682 50.000 16.77 0.00 0.00 5.19
734 1169 0.829990 CCTCCTCTCCTCCTTTGCTC 59.170 60.000 0.00 0.00 0.00 4.26
853 1312 0.980231 AGGATCTGAAGGAAGCCGCT 60.980 55.000 0.00 0.00 0.00 5.52
861 1320 4.555262 GCGAGAAGATAAGGATCTGAAGG 58.445 47.826 0.00 0.00 41.87 3.46
863 1322 3.004839 CGGCGAGAAGATAAGGATCTGAA 59.995 47.826 0.00 0.00 41.87 3.02
1482 1966 1.959899 GCACCTCGAACATGAGCACG 61.960 60.000 0.00 0.00 34.56 5.34
1489 1973 3.121030 GCAGCGCACCTCGAACAT 61.121 61.111 11.47 0.00 41.67 2.71
1528 2012 3.928375 GGAAATCGCACCGAAAAGTACTA 59.072 43.478 0.00 0.00 39.99 1.82
1529 2013 2.740447 GGAAATCGCACCGAAAAGTACT 59.260 45.455 0.00 0.00 39.99 2.73
1530 2014 3.113325 GGAAATCGCACCGAAAAGTAC 57.887 47.619 0.00 0.00 39.99 2.73
1760 2247 5.519566 CGGCGGTACTTTACACACAATATAA 59.480 40.000 0.00 0.00 0.00 0.98
1841 2330 5.010314 TCAACATGTAGGACAACGAGTAACT 59.990 40.000 0.00 0.00 0.00 2.24
1842 2331 5.224888 TCAACATGTAGGACAACGAGTAAC 58.775 41.667 0.00 0.00 0.00 2.50
1843 2332 5.242171 TCTCAACATGTAGGACAACGAGTAA 59.758 40.000 0.00 0.00 0.00 2.24
1891 2383 9.887629 TTCACGTATGAATAAACCCACTATTTA 57.112 29.630 0.00 0.00 40.01 1.40
1960 2461 2.746362 CTCTGCTTGAGTGGGACAATTC 59.254 50.000 0.00 0.00 44.16 2.17
1981 2482 5.121811 AGTGGATCATGAATCTTACTGTGC 58.878 41.667 0.00 0.00 33.48 4.57
2023 2524 7.143340 GGAACTTGAATAAGGTTTGTTGTACC 58.857 38.462 0.00 0.00 38.26 3.34
2041 2542 6.149973 TGCACTCATTCTAAAGATGGAACTTG 59.850 38.462 0.00 0.00 0.00 3.16
2159 2660 1.480954 CGGCACATAGGTTAGGTCACT 59.519 52.381 0.00 0.00 0.00 3.41
2362 2863 4.469657 AGACAAAAACCTCCATAGCACAA 58.530 39.130 0.00 0.00 0.00 3.33
2470 2972 8.081633 TGTGTGTCCAAAATGTAAAATGAGATC 58.918 33.333 0.00 0.00 0.00 2.75
2473 2975 6.420604 GGTGTGTGTCCAAAATGTAAAATGAG 59.579 38.462 0.00 0.00 0.00 2.90
2476 2978 6.227298 TGGTGTGTGTCCAAAATGTAAAAT 57.773 33.333 0.00 0.00 31.50 1.82
2488 2990 1.519408 GTGGTACATGGTGTGTGTCC 58.481 55.000 0.00 0.00 44.52 4.02
2797 3300 6.609876 AGGGCCAGGAAAAATTTAAATGTTT 58.390 32.000 14.88 14.88 0.00 2.83
2919 3422 7.628580 GCTCCAAGTTTACTTTCTTCACTTTGT 60.629 37.037 0.00 0.00 33.11 2.83
3139 3662 9.787532 CTCACTGTTGAACAAAAAGAAGAAATA 57.212 29.630 0.00 0.00 0.00 1.40
3327 3850 2.029828 GTCAGAAGAGAGAAAGGCGACA 60.030 50.000 0.00 0.00 0.00 4.35
4741 5264 9.959749 GTAAAAGTTTGAACTGGATTGTCAATA 57.040 29.630 0.00 0.00 39.66 1.90
4939 5475 3.804036 CTGTAACTGAATATGCCGGGAA 58.196 45.455 0.00 0.00 0.00 3.97
5476 6323 1.676746 CGAACGGAGGGAGTAGATGA 58.323 55.000 0.00 0.00 0.00 2.92
5477 6324 0.669077 CCGAACGGAGGGAGTAGATG 59.331 60.000 7.53 0.00 37.50 2.90
5478 6325 0.549950 TCCGAACGGAGGGAGTAGAT 59.450 55.000 12.04 0.00 39.76 1.98
5481 6328 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
5482 6329 1.755380 CTAATTCCGAACGGAGGGAGT 59.245 52.381 15.34 4.12 46.06 3.85
5483 6330 1.755380 ACTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 14.71 46.06 4.30
5484 6331 1.856629 ACTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
5485 6332 2.277084 CAACTAATTCCGAACGGAGGG 58.723 52.381 15.34 9.70 46.06 4.30
5486 6333 2.928116 GACAACTAATTCCGAACGGAGG 59.072 50.000 15.34 10.00 46.06 4.30
5487 6334 3.846360 AGACAACTAATTCCGAACGGAG 58.154 45.455 15.34 7.27 46.06 4.63
5488 6335 3.671433 CGAGACAACTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
5489 6336 2.597305 CGAGACAACTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
5490 6337 2.597305 CCGAGACAACTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
5491 6338 3.841643 TCCGAGACAACTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
5492 6339 4.524316 TTCCGAGACAACTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
5493 6340 4.524316 TTTCCGAGACAACTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
5494 6341 4.868171 TCATTTCCGAGACAACTAATTCCG 59.132 41.667 0.00 0.00 0.00 4.30
5495 6342 6.737254 TTCATTTCCGAGACAACTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
5496 6343 7.752695 ACATTCATTTCCGAGACAACTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
5497 6344 7.687941 ACATTCATTTCCGAGACAACTAATT 57.312 32.000 0.00 0.00 0.00 1.40
5498 6345 8.964476 ATACATTCATTTCCGAGACAACTAAT 57.036 30.769 0.00 0.00 0.00 1.73
5499 6346 8.258007 AGATACATTCATTTCCGAGACAACTAA 58.742 33.333 0.00 0.00 0.00 2.24
5500 6347 7.782049 AGATACATTCATTTCCGAGACAACTA 58.218 34.615 0.00 0.00 0.00 2.24
5501 6348 6.644347 AGATACATTCATTTCCGAGACAACT 58.356 36.000 0.00 0.00 0.00 3.16
5502 6349 6.910536 AGATACATTCATTTCCGAGACAAC 57.089 37.500 0.00 0.00 0.00 3.32
5503 6350 8.007405 TCTAGATACATTCATTTCCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
5504 6351 7.582667 TCTAGATACATTCATTTCCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
5505 6352 8.138712 AGTTCTAGATACATTCATTTCCGAGAC 58.861 37.037 0.00 0.00 0.00 3.36
5506 6353 8.239038 AGTTCTAGATACATTCATTTCCGAGA 57.761 34.615 0.00 0.00 0.00 4.04
5507 6354 9.967346 TTAGTTCTAGATACATTCATTTCCGAG 57.033 33.333 0.00 0.00 0.00 4.63
5532 6379 9.490379 GGAAATGGATGTATCTAGACGTATTTT 57.510 33.333 0.00 0.00 0.00 1.82
5533 6380 7.813148 CGGAAATGGATGTATCTAGACGTATTT 59.187 37.037 0.00 0.00 0.00 1.40
5534 6381 7.313646 CGGAAATGGATGTATCTAGACGTATT 58.686 38.462 0.00 0.00 0.00 1.89
5535 6382 6.625300 GCGGAAATGGATGTATCTAGACGTAT 60.625 42.308 0.00 0.00 0.00 3.06
5536 6383 5.335426 GCGGAAATGGATGTATCTAGACGTA 60.335 44.000 0.00 0.00 0.00 3.57
5537 6384 4.558898 GCGGAAATGGATGTATCTAGACGT 60.559 45.833 0.00 0.00 0.00 4.34
5538 6385 3.921021 GCGGAAATGGATGTATCTAGACG 59.079 47.826 0.00 0.00 0.00 4.18
5539 6386 3.921021 CGCGGAAATGGATGTATCTAGAC 59.079 47.826 0.00 0.00 0.00 2.59
5540 6387 3.824443 TCGCGGAAATGGATGTATCTAGA 59.176 43.478 6.13 0.00 0.00 2.43
5541 6388 3.921021 GTCGCGGAAATGGATGTATCTAG 59.079 47.826 6.13 0.00 0.00 2.43
5542 6389 3.319689 TGTCGCGGAAATGGATGTATCTA 59.680 43.478 6.13 0.00 0.00 1.98
5543 6390 2.102420 TGTCGCGGAAATGGATGTATCT 59.898 45.455 6.13 0.00 0.00 1.98
5544 6391 2.479837 TGTCGCGGAAATGGATGTATC 58.520 47.619 6.13 0.00 0.00 2.24
5545 6392 2.613026 TGTCGCGGAAATGGATGTAT 57.387 45.000 6.13 0.00 0.00 2.29
5546 6393 2.276201 CTTGTCGCGGAAATGGATGTA 58.724 47.619 6.13 0.00 0.00 2.29
5547 6394 1.086696 CTTGTCGCGGAAATGGATGT 58.913 50.000 6.13 0.00 0.00 3.06
5548 6395 1.086696 ACTTGTCGCGGAAATGGATG 58.913 50.000 6.13 0.00 0.00 3.51
5549 6396 2.684001 TACTTGTCGCGGAAATGGAT 57.316 45.000 6.13 0.00 0.00 3.41
5550 6397 2.459060 TTACTTGTCGCGGAAATGGA 57.541 45.000 6.13 0.00 0.00 3.41
5551 6398 3.486875 GGAATTACTTGTCGCGGAAATGG 60.487 47.826 6.13 0.00 0.00 3.16
5552 6399 3.680789 GGAATTACTTGTCGCGGAAATG 58.319 45.455 6.13 0.00 0.00 2.32
5553 6400 2.350498 CGGAATTACTTGTCGCGGAAAT 59.650 45.455 6.13 0.00 0.00 2.17
5554 6401 1.727880 CGGAATTACTTGTCGCGGAAA 59.272 47.619 6.13 0.00 0.00 3.13
5555 6402 1.067706 TCGGAATTACTTGTCGCGGAA 60.068 47.619 6.13 0.00 0.00 4.30
5556 6403 0.527113 TCGGAATTACTTGTCGCGGA 59.473 50.000 6.13 0.00 0.00 5.54
5557 6404 1.060122 GTTCGGAATTACTTGTCGCGG 59.940 52.381 6.13 0.00 0.00 6.46
5558 6405 1.266211 CGTTCGGAATTACTTGTCGCG 60.266 52.381 0.00 0.00 0.00 5.87
5559 6406 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
5560 6407 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
5561 6408 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5562 6409 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
5563 6410 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
5564 6411 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
5565 6412 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
5566 6413 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
5567 6414 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5568 6415 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
5569 6416 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
5570 6417 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
5571 6418 0.033796 ATGTACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55
5572 6419 0.384669 GATGTACTCCCTCCGTTCGG 59.615 60.000 4.74 4.74 0.00 4.30
5573 6420 1.334243 GAGATGTACTCCCTCCGTTCG 59.666 57.143 0.00 0.00 39.53 3.95
5574 6421 2.657143 AGAGATGTACTCCCTCCGTTC 58.343 52.381 0.00 0.00 45.96 3.95
5575 6422 2.830651 AGAGATGTACTCCCTCCGTT 57.169 50.000 0.00 0.00 45.96 4.44
5576 6423 2.158638 GGTAGAGATGTACTCCCTCCGT 60.159 54.545 0.00 0.00 45.96 4.69
5577 6424 2.158652 TGGTAGAGATGTACTCCCTCCG 60.159 54.545 0.00 0.00 45.96 4.63
5578 6425 3.492337 CTGGTAGAGATGTACTCCCTCC 58.508 54.545 0.00 0.00 45.96 4.30
5579 6426 2.888414 GCTGGTAGAGATGTACTCCCTC 59.112 54.545 0.00 0.00 45.96 4.30
5580 6427 2.425102 GGCTGGTAGAGATGTACTCCCT 60.425 54.545 0.00 0.00 45.96 4.20
5581 6428 1.964933 GGCTGGTAGAGATGTACTCCC 59.035 57.143 0.00 0.00 45.96 4.30
5582 6429 2.952116 AGGCTGGTAGAGATGTACTCC 58.048 52.381 0.00 0.00 45.96 3.85
5583 6430 6.451393 CATAAAGGCTGGTAGAGATGTACTC 58.549 44.000 0.00 0.00 45.22 2.59
5584 6431 5.221541 GCATAAAGGCTGGTAGAGATGTACT 60.222 44.000 0.00 0.00 0.00 2.73
5585 6432 4.991687 GCATAAAGGCTGGTAGAGATGTAC 59.008 45.833 0.00 0.00 0.00 2.90
5663 6510 4.041049 TGTTTGCATTAGCGTTTCACTTG 58.959 39.130 0.00 0.00 46.23 3.16
5729 6576 4.824166 CATGCTTGTCCTGCGCGC 62.824 66.667 27.26 27.26 0.00 6.86
5751 6613 2.867975 GCCAAATCTTGCCACATAATGC 59.132 45.455 0.00 0.00 0.00 3.56
5869 6731 7.272506 AATAATTAATATTGTGCGCACAGCCG 61.273 38.462 38.37 0.00 42.94 5.52
5870 6732 5.920273 AATAATTAATATTGTGCGCACAGCC 59.080 36.000 38.37 15.99 42.94 4.85
5871 6733 6.991485 AATAATTAATATTGTGCGCACAGC 57.009 33.333 38.37 16.38 42.94 4.40
5872 6734 9.018716 TCAAAATAATTAATATTGTGCGCACAG 57.981 29.630 38.37 22.71 42.94 3.66
6365 7227 3.795623 TGACGCTAACCTGTAATCCTC 57.204 47.619 0.00 0.00 0.00 3.71
6460 7322 9.155975 GATTGATTGCCTATACAAGTATACCTG 57.844 37.037 0.00 0.00 31.96 4.00
6600 7462 6.764877 TCAGAACTTCTACGCTTAAAACAG 57.235 37.500 0.00 0.00 0.00 3.16
6623 7485 9.642343 AAAGGAACAACTAAAAAGAGGACTAAT 57.358 29.630 0.00 0.00 0.00 1.73
6664 7526 6.605995 GGACACCCCTAAAAACATAAGCTTAT 59.394 38.462 13.37 13.37 0.00 1.73
6668 7530 4.341487 AGGACACCCCTAAAAACATAAGC 58.659 43.478 0.00 0.00 45.48 3.09
6705 7567 5.632244 TTTATCAAGACGCCCCTAAAAAC 57.368 39.130 0.00 0.00 0.00 2.43
6720 7582 9.920133 TGCTACAAAACTATGCAAATTTATCAA 57.080 25.926 0.00 0.00 0.00 2.57
6744 7606 3.672310 CAAATTACGCATTTGGCATTGC 58.328 40.909 11.67 11.67 45.75 3.56
6755 7617 2.556189 ACAGAACCATGCAAATTACGCA 59.444 40.909 5.05 5.05 44.94 5.24
6756 7618 3.216147 ACAGAACCATGCAAATTACGC 57.784 42.857 0.00 0.00 0.00 4.42
6757 7619 4.142708 TGCTACAGAACCATGCAAATTACG 60.143 41.667 0.00 0.00 0.00 3.18
6758 7620 5.309323 TGCTACAGAACCATGCAAATTAC 57.691 39.130 0.00 0.00 0.00 1.89
6759 7621 5.973899 TTGCTACAGAACCATGCAAATTA 57.026 34.783 0.00 0.00 40.10 1.40
6760 7622 4.870123 TTGCTACAGAACCATGCAAATT 57.130 36.364 0.00 0.00 40.10 1.82
6761 7623 4.751060 CATTGCTACAGAACCATGCAAAT 58.249 39.130 0.00 0.00 44.90 2.32
6762 7624 3.614630 GCATTGCTACAGAACCATGCAAA 60.615 43.478 0.16 0.00 44.90 3.68
6763 7625 2.094597 GCATTGCTACAGAACCATGCAA 60.095 45.455 0.16 0.00 45.62 4.08
6764 7626 1.473677 GCATTGCTACAGAACCATGCA 59.526 47.619 0.16 0.00 34.31 3.96
6765 7627 1.202336 GGCATTGCTACAGAACCATGC 60.202 52.381 8.82 0.00 0.00 4.06
6766 7628 2.093890 TGGCATTGCTACAGAACCATG 58.906 47.619 8.82 0.00 0.00 3.66
6767 7629 2.512692 TGGCATTGCTACAGAACCAT 57.487 45.000 8.82 0.00 0.00 3.55
6768 7630 2.284754 TTGGCATTGCTACAGAACCA 57.715 45.000 8.82 0.00 0.00 3.67
6769 7631 3.874392 ATTTGGCATTGCTACAGAACC 57.126 42.857 8.82 0.00 0.00 3.62
6770 7632 5.708948 TGTTATTTGGCATTGCTACAGAAC 58.291 37.500 8.82 9.84 0.00 3.01
6771 7633 5.105797 CCTGTTATTTGGCATTGCTACAGAA 60.106 40.000 8.82 0.00 35.06 3.02
6772 7634 4.398988 CCTGTTATTTGGCATTGCTACAGA 59.601 41.667 8.82 0.00 35.06 3.41
6773 7635 4.398988 TCCTGTTATTTGGCATTGCTACAG 59.601 41.667 8.82 11.46 33.39 2.74
6774 7636 4.339748 TCCTGTTATTTGGCATTGCTACA 58.660 39.130 8.82 0.00 0.00 2.74
6775 7637 4.981806 TCCTGTTATTTGGCATTGCTAC 57.018 40.909 8.82 0.00 0.00 3.58
6776 7638 4.275689 CGATCCTGTTATTTGGCATTGCTA 59.724 41.667 8.82 0.00 0.00 3.49
6777 7639 3.067180 CGATCCTGTTATTTGGCATTGCT 59.933 43.478 8.82 0.00 0.00 3.91
6818 7680 1.820906 GCGTAACCCCGGGAAATCC 60.821 63.158 26.32 4.41 0.00 3.01
6819 7681 1.820906 GGCGTAACCCCGGGAAATC 60.821 63.158 26.32 8.89 0.00 2.17
6837 7699 5.049405 GGTTGATCAAGACTGTGTTGGTTAG 60.049 44.000 16.42 0.00 0.00 2.34
6845 7707 3.131709 ACTGGGTTGATCAAGACTGTG 57.868 47.619 8.80 0.36 0.00 3.66
6847 7709 3.261897 AGGTACTGGGTTGATCAAGACTG 59.738 47.826 8.80 10.88 37.18 3.51
6848 7710 3.521727 AGGTACTGGGTTGATCAAGACT 58.478 45.455 8.80 0.00 37.18 3.24
6849 7711 3.983044 AGGTACTGGGTTGATCAAGAC 57.017 47.619 8.80 5.37 37.18 3.01
6850 7712 5.091552 ACTAAGGTACTGGGTTGATCAAGA 58.908 41.667 8.80 0.00 40.86 3.02
6851 7713 5.422214 ACTAAGGTACTGGGTTGATCAAG 57.578 43.478 8.80 0.00 40.86 3.02
6852 7714 5.836024 AACTAAGGTACTGGGTTGATCAA 57.164 39.130 3.38 3.38 40.86 2.57
6880 7742 0.370273 GCGCTCTGTAATGAACCACG 59.630 55.000 0.00 0.00 0.00 4.94
6889 7751 4.495911 CAGAGATCATAGCGCTCTGTAA 57.504 45.455 16.34 0.00 46.51 2.41
6951 7813 7.722363 TCAGCTATCAAGTGATAATCCGTAAA 58.278 34.615 2.79 0.00 36.66 2.01
6955 7817 7.307632 CCTTTTCAGCTATCAAGTGATAATCCG 60.308 40.741 2.79 0.00 36.66 4.18
6959 7821 6.599244 CCACCTTTTCAGCTATCAAGTGATAA 59.401 38.462 2.79 0.00 36.66 1.75
6993 7855 3.953612 TGTTTTGGTCACTCTTTCTGCAT 59.046 39.130 0.00 0.00 0.00 3.96
7048 7910 1.523095 GACTCAACTGTCGTTCTGTGC 59.477 52.381 0.00 0.00 0.00 4.57
7056 7918 1.004918 GGGTGGGACTCAACTGTCG 60.005 63.158 0.00 0.00 37.81 4.35
7124 11870 8.235359 TGCATTCATCAAACATGGTTATATCA 57.765 30.769 0.00 0.00 0.00 2.15
7126 11872 9.701098 GATTGCATTCATCAAACATGGTTATAT 57.299 29.630 0.00 0.00 0.00 0.86
7127 11873 8.143193 GGATTGCATTCATCAAACATGGTTATA 58.857 33.333 10.55 0.00 0.00 0.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.