Multiple sequence alignment - TraesCS3B01G313100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G313100 chr3B 100.000 2585 0 0 1 2585 503029628 503032212 0.000000e+00 4774.0
1 TraesCS3B01G313100 chr3B 86.818 220 22 4 2341 2555 707428625 707428842 3.320000e-59 239.0
2 TraesCS3B01G313100 chr3B 85.253 217 28 1 2342 2554 532227125 532226909 1.200000e-53 220.0
3 TraesCS3B01G313100 chr3B 77.151 337 62 9 24 359 740099219 740098897 5.680000e-42 182.0
4 TraesCS3B01G313100 chr3B 81.132 159 22 5 175 329 759028896 759029050 1.260000e-23 121.0
5 TraesCS3B01G313100 chr3A 92.675 1884 84 23 1 1864 508215311 508217160 0.000000e+00 2665.0
6 TraesCS3B01G313100 chr3A 95.804 286 10 2 1912 2196 646678884 646678600 6.520000e-126 460.0
7 TraesCS3B01G313100 chr3A 93.243 74 4 1 1849 1921 508217303 508217376 9.780000e-20 108.0
8 TraesCS3B01G313100 chr3A 100.000 33 0 0 2553 2585 508217506 508217538 7.720000e-06 62.1
9 TraesCS3B01G313100 chr3D 94.807 1502 43 16 443 1921 386775972 386777461 0.000000e+00 2309.0
10 TraesCS3B01G313100 chr3D 86.801 447 33 6 3 449 386775375 386775795 2.330000e-130 475.0
11 TraesCS3B01G313100 chr3D 100.000 31 0 0 2555 2585 386777597 386777627 9.990000e-05 58.4
12 TraesCS3B01G313100 chr7A 96.113 283 11 0 1914 2196 627156428 627156710 1.810000e-126 462.0
13 TraesCS3B01G313100 chr7A 86.977 215 23 4 2341 2551 81096886 81097099 1.200000e-58 237.0
14 TraesCS3B01G313100 chr7A 85.253 217 27 4 2341 2553 539850225 539850440 4.330000e-53 219.0
15 TraesCS3B01G313100 chr5B 96.429 280 9 1 1916 2195 315185431 315185709 6.520000e-126 460.0
16 TraesCS3B01G313100 chr5B 95.775 284 10 2 1913 2195 505567832 505567550 8.430000e-125 457.0
17 TraesCS3B01G313100 chr5B 94.521 292 12 4 1904 2195 655449947 655449660 5.070000e-122 448.0
18 TraesCS3B01G313100 chr4B 95.775 284 11 1 1912 2195 645319777 645319495 8.430000e-125 457.0
19 TraesCS3B01G313100 chr6B 95.760 283 11 1 1915 2197 404460212 404459931 3.030000e-124 455.0
20 TraesCS3B01G313100 chr4A 94.276 297 14 3 1915 2208 11322637 11322933 3.920000e-123 451.0
21 TraesCS3B01G313100 chr7B 93.355 301 18 2 1900 2200 558872720 558872422 6.560000e-121 444.0
22 TraesCS3B01G313100 chr7D 87.624 202 20 4 2355 2552 121514077 121514277 2.000000e-56 230.0
23 TraesCS3B01G313100 chr5A 85.909 220 25 5 2338 2553 544572600 544572817 2.000000e-56 230.0
24 TraesCS3B01G313100 chr5A 75.241 311 63 8 78 385 684314817 684315116 4.490000e-28 135.0
25 TraesCS3B01G313100 chr6A 83.806 247 28 8 2317 2551 224899413 224899659 9.310000e-55 224.0
26 TraesCS3B01G313100 chr4D 84.753 223 28 5 2341 2559 47728169 47728389 4.330000e-53 219.0
27 TraesCS3B01G313100 chr2B 84.862 218 28 3 2341 2554 707373929 707373713 5.600000e-52 215.0
28 TraesCS3B01G313100 chr1B 78.037 214 37 10 178 384 669074642 669074432 2.700000e-25 126.0
29 TraesCS3B01G313100 chr1B 84.270 89 12 2 281 368 100053863 100053776 4.580000e-13 86.1
30 TraesCS3B01G313100 chr1D 77.487 191 38 4 182 368 221084007 221084196 2.720000e-20 110.0
31 TraesCS3B01G313100 chr2D 85.000 100 13 2 178 276 537242320 537242418 1.640000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G313100 chr3B 503029628 503032212 2584 False 4774.000000 4774 100.000000 1 2585 1 chr3B.!!$F1 2584
1 TraesCS3B01G313100 chr3A 508215311 508217538 2227 False 945.033333 2665 95.306000 1 2585 3 chr3A.!!$F1 2584
2 TraesCS3B01G313100 chr3D 386775375 386777627 2252 False 947.466667 2309 93.869333 3 2585 3 chr3D.!!$F1 2582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
882 1077 0.252284 CCACCCCACAGGACTACTCT 60.252 60.0 0.0 0.0 39.89 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2033 2419 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.0 0.0 0.0 0.0 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 0.341258 AGATTCCTCCCAGCTCCTCA 59.659 55.000 0.00 0.00 0.00 3.86
73 74 4.037446 GTGGTTAAGGTTTCTTGTCATGCA 59.963 41.667 0.00 0.00 34.59 3.96
74 75 4.832266 TGGTTAAGGTTTCTTGTCATGCAT 59.168 37.500 0.00 0.00 34.59 3.96
75 76 6.007076 TGGTTAAGGTTTCTTGTCATGCATA 58.993 36.000 0.00 0.00 34.59 3.14
76 77 6.663093 TGGTTAAGGTTTCTTGTCATGCATAT 59.337 34.615 0.00 0.00 34.59 1.78
83 84 4.058721 TCTTGTCATGCATATGTACGCT 57.941 40.909 0.00 0.00 35.73 5.07
151 152 2.983930 AGTGACGACTGCGGCTCTC 61.984 63.158 0.00 0.00 45.47 3.20
176 177 2.043227 CCTAGTTCTTAGGGGCAGAGG 58.957 57.143 0.00 0.00 44.57 3.69
177 178 2.043227 CTAGTTCTTAGGGGCAGAGGG 58.957 57.143 0.00 0.00 0.00 4.30
178 179 0.621862 AGTTCTTAGGGGCAGAGGGG 60.622 60.000 0.00 0.00 0.00 4.79
200 201 2.004017 ACGTGCACGAAGACTTTTCAA 58.996 42.857 42.94 0.00 43.02 2.69
300 301 2.357952 CTGGTCGTTCGATAGTCCATGA 59.642 50.000 0.00 0.00 37.40 3.07
413 414 6.707161 ACAAACAAACAATGGATCATGGAAAG 59.293 34.615 0.00 0.00 0.00 2.62
462 646 0.534877 TGCATATCACCATCACCGGC 60.535 55.000 0.00 0.00 0.00 6.13
510 694 0.254747 CCAAGGAATTGACCCCGCTA 59.745 55.000 0.00 0.00 0.00 4.26
787 981 0.904649 CCACCACCACAGATCTAGCA 59.095 55.000 0.00 0.00 0.00 3.49
867 1062 0.843343 TTACTCCCTTCCACCCCACC 60.843 60.000 0.00 0.00 0.00 4.61
872 1067 3.182263 CTTCCACCCCACCCCACA 61.182 66.667 0.00 0.00 0.00 4.17
873 1068 3.182263 TTCCACCCCACCCCACAG 61.182 66.667 0.00 0.00 0.00 3.66
876 1071 3.966543 CACCCCACCCCACAGGAC 61.967 72.222 0.00 0.00 39.89 3.85
877 1072 4.202030 ACCCCACCCCACAGGACT 62.202 66.667 0.00 0.00 39.89 3.85
878 1073 2.124085 CCCCACCCCACAGGACTA 59.876 66.667 0.00 0.00 39.89 2.59
880 1075 1.229529 CCCACCCCACAGGACTACT 60.230 63.158 0.00 0.00 39.89 2.57
881 1076 1.265454 CCCACCCCACAGGACTACTC 61.265 65.000 0.00 0.00 39.89 2.59
882 1077 0.252284 CCACCCCACAGGACTACTCT 60.252 60.000 0.00 0.00 39.89 3.24
967 1173 1.068333 CACTTCCCCACTGCAAAATCG 60.068 52.381 0.00 0.00 0.00 3.34
969 1175 2.224670 ACTTCCCCACTGCAAAATCGTA 60.225 45.455 0.00 0.00 0.00 3.43
1101 1313 2.262915 CTCGCTTCCGTCCTGCTT 59.737 61.111 0.00 0.00 35.54 3.91
1188 1400 3.324930 TCCAGCTCCAGCCACCTG 61.325 66.667 0.00 0.00 43.38 4.00
1532 1744 4.175489 GCTCGCGACGCCACTCTA 62.175 66.667 15.34 0.00 0.00 2.43
1591 1803 2.125512 GCAGCAGGTGACGGGTAG 60.126 66.667 3.02 0.00 34.01 3.18
1679 1903 6.938030 AGGGTTCTGTAAATTTGTCGATTGTA 59.062 34.615 0.00 0.00 0.00 2.41
1698 1922 7.655732 CGATTGTATGATTGGTAAGGACACATA 59.344 37.037 0.00 0.00 0.00 2.29
1893 2278 7.500992 TGGTTTGCCTTATTGTGAAATGTTAA 58.499 30.769 0.00 0.00 35.27 2.01
1921 2307 3.212450 GCCTACCGCTACATAAGGC 57.788 57.895 0.00 0.00 45.37 4.35
1922 2308 0.320508 GCCTACCGCTACATAAGGCC 60.321 60.000 0.00 0.00 45.69 5.19
1923 2309 0.038526 CCTACCGCTACATAAGGCCG 60.039 60.000 0.00 0.00 0.00 6.13
1924 2310 0.038526 CTACCGCTACATAAGGCCGG 60.039 60.000 0.00 0.00 0.00 6.13
1925 2311 0.756442 TACCGCTACATAAGGCCGGT 60.756 55.000 1.90 8.15 38.28 5.28
1926 2312 1.300697 CCGCTACATAAGGCCGGTC 60.301 63.158 0.00 0.00 0.00 4.79
1927 2313 1.440060 CGCTACATAAGGCCGGTCA 59.560 57.895 9.71 0.00 0.00 4.02
1928 2314 0.874607 CGCTACATAAGGCCGGTCAC 60.875 60.000 9.71 0.00 0.00 3.67
1929 2315 0.177141 GCTACATAAGGCCGGTCACA 59.823 55.000 9.71 0.00 0.00 3.58
1930 2316 1.806623 GCTACATAAGGCCGGTCACAG 60.807 57.143 9.71 0.00 0.00 3.66
1931 2317 1.480954 CTACATAAGGCCGGTCACAGT 59.519 52.381 9.71 3.50 0.00 3.55
1932 2318 1.563924 ACATAAGGCCGGTCACAGTA 58.436 50.000 9.71 0.00 0.00 2.74
1933 2319 1.480954 ACATAAGGCCGGTCACAGTAG 59.519 52.381 9.71 0.00 0.00 2.57
1934 2320 1.120530 ATAAGGCCGGTCACAGTAGG 58.879 55.000 9.71 0.00 0.00 3.18
1935 2321 0.974010 TAAGGCCGGTCACAGTAGGG 60.974 60.000 9.71 0.00 0.00 3.53
1936 2322 2.682494 GGCCGGTCACAGTAGGGA 60.682 66.667 0.00 0.00 0.00 4.20
1937 2323 2.722201 GGCCGGTCACAGTAGGGAG 61.722 68.421 0.00 0.00 0.00 4.30
1938 2324 2.722201 GCCGGTCACAGTAGGGAGG 61.722 68.421 1.90 0.00 0.00 4.30
1939 2325 1.000019 CCGGTCACAGTAGGGAGGA 60.000 63.158 0.00 0.00 0.00 3.71
1940 2326 0.613853 CCGGTCACAGTAGGGAGGAA 60.614 60.000 0.00 0.00 0.00 3.36
1941 2327 0.531200 CGGTCACAGTAGGGAGGAAC 59.469 60.000 0.00 0.00 0.00 3.62
1943 2329 2.258109 GGTCACAGTAGGGAGGAACTT 58.742 52.381 0.00 0.00 41.55 2.66
1944 2330 3.438183 GGTCACAGTAGGGAGGAACTTA 58.562 50.000 0.00 0.00 41.55 2.24
1945 2331 3.447944 GGTCACAGTAGGGAGGAACTTAG 59.552 52.174 0.00 0.00 41.55 2.18
1946 2332 3.447944 GTCACAGTAGGGAGGAACTTAGG 59.552 52.174 0.00 0.00 41.55 2.69
1947 2333 3.335786 TCACAGTAGGGAGGAACTTAGGA 59.664 47.826 0.00 0.00 41.55 2.94
1948 2334 3.702045 CACAGTAGGGAGGAACTTAGGAG 59.298 52.174 0.00 0.00 41.55 3.69
1949 2335 3.337301 ACAGTAGGGAGGAACTTAGGAGT 59.663 47.826 0.00 0.00 41.55 3.85
1950 2336 4.543337 ACAGTAGGGAGGAACTTAGGAGTA 59.457 45.833 0.00 0.00 41.55 2.59
1951 2337 5.016031 ACAGTAGGGAGGAACTTAGGAGTAA 59.984 44.000 0.00 0.00 41.55 2.24
1952 2338 5.360429 CAGTAGGGAGGAACTTAGGAGTAAC 59.640 48.000 0.00 0.00 41.55 2.50
1953 2339 4.415224 AGGGAGGAACTTAGGAGTAACA 57.585 45.455 0.00 0.00 41.55 2.41
1954 2340 4.961585 AGGGAGGAACTTAGGAGTAACAT 58.038 43.478 0.00 0.00 41.55 2.71
1955 2341 4.963628 AGGGAGGAACTTAGGAGTAACATC 59.036 45.833 0.00 0.00 41.55 3.06
1956 2342 4.715297 GGGAGGAACTTAGGAGTAACATCA 59.285 45.833 0.00 0.00 41.55 3.07
1957 2343 5.395435 GGGAGGAACTTAGGAGTAACATCAC 60.395 48.000 0.00 0.00 41.55 3.06
1958 2344 5.187186 GGAGGAACTTAGGAGTAACATCACA 59.813 44.000 0.00 0.00 41.55 3.58
1959 2345 6.127026 GGAGGAACTTAGGAGTAACATCACAT 60.127 42.308 0.00 0.00 41.55 3.21
1960 2346 7.069578 GGAGGAACTTAGGAGTAACATCACATA 59.930 40.741 0.00 0.00 41.55 2.29
1961 2347 7.783042 AGGAACTTAGGAGTAACATCACATAC 58.217 38.462 0.00 0.00 34.21 2.39
1962 2348 7.620094 AGGAACTTAGGAGTAACATCACATACT 59.380 37.037 0.00 0.00 34.21 2.12
1963 2349 7.921745 GGAACTTAGGAGTAACATCACATACTC 59.078 40.741 4.72 4.72 44.66 2.59
1971 2357 8.942338 GAGTAACATCACATACTCCAATACAA 57.058 34.615 2.30 0.00 41.29 2.41
1972 2358 8.718102 AGTAACATCACATACTCCAATACAAC 57.282 34.615 0.00 0.00 0.00 3.32
1973 2359 8.540388 AGTAACATCACATACTCCAATACAACT 58.460 33.333 0.00 0.00 0.00 3.16
1974 2360 9.162764 GTAACATCACATACTCCAATACAACTT 57.837 33.333 0.00 0.00 0.00 2.66
1975 2361 8.635765 AACATCACATACTCCAATACAACTTT 57.364 30.769 0.00 0.00 0.00 2.66
1976 2362 8.044060 ACATCACATACTCCAATACAACTTTG 57.956 34.615 0.00 0.00 0.00 2.77
1977 2363 6.494893 TCACATACTCCAATACAACTTTGC 57.505 37.500 0.00 0.00 0.00 3.68
1978 2364 6.237901 TCACATACTCCAATACAACTTTGCT 58.762 36.000 0.00 0.00 0.00 3.91
1979 2365 6.714810 TCACATACTCCAATACAACTTTGCTT 59.285 34.615 0.00 0.00 0.00 3.91
1980 2366 7.880713 TCACATACTCCAATACAACTTTGCTTA 59.119 33.333 0.00 0.00 0.00 3.09
1981 2367 8.677300 CACATACTCCAATACAACTTTGCTTAT 58.323 33.333 0.00 0.00 0.00 1.73
1982 2368 8.677300 ACATACTCCAATACAACTTTGCTTATG 58.323 33.333 0.00 0.00 0.00 1.90
1983 2369 8.677300 CATACTCCAATACAACTTTGCTTATGT 58.323 33.333 0.00 0.00 0.00 2.29
1984 2370 6.913170 ACTCCAATACAACTTTGCTTATGTG 58.087 36.000 0.00 0.00 0.00 3.21
1985 2371 6.071952 ACTCCAATACAACTTTGCTTATGTGG 60.072 38.462 0.00 0.00 0.00 4.17
1986 2372 4.864247 CCAATACAACTTTGCTTATGTGGC 59.136 41.667 0.00 0.00 0.00 5.01
1987 2373 5.468592 CAATACAACTTTGCTTATGTGGCA 58.531 37.500 0.00 0.00 37.97 4.92
1988 2374 3.369546 ACAACTTTGCTTATGTGGCAC 57.630 42.857 11.55 11.55 39.55 5.01
1989 2375 2.287547 ACAACTTTGCTTATGTGGCACG 60.288 45.455 13.77 0.00 39.55 5.34
1990 2376 1.604604 ACTTTGCTTATGTGGCACGT 58.395 45.000 17.65 17.65 39.55 4.49
1991 2377 2.773487 ACTTTGCTTATGTGGCACGTA 58.227 42.857 15.38 15.38 39.55 3.57
1992 2378 3.343617 ACTTTGCTTATGTGGCACGTAT 58.656 40.909 19.55 7.98 39.55 3.06
1993 2379 3.756434 ACTTTGCTTATGTGGCACGTATT 59.244 39.130 19.55 4.10 39.55 1.89
1994 2380 4.217550 ACTTTGCTTATGTGGCACGTATTT 59.782 37.500 19.55 1.66 39.55 1.40
1995 2381 5.413213 ACTTTGCTTATGTGGCACGTATTTA 59.587 36.000 19.55 5.10 39.55 1.40
1996 2382 5.881777 TTGCTTATGTGGCACGTATTTAA 57.118 34.783 19.55 11.84 39.55 1.52
1997 2383 6.443934 TTGCTTATGTGGCACGTATTTAAT 57.556 33.333 19.55 5.08 39.55 1.40
1998 2384 7.555306 TTGCTTATGTGGCACGTATTTAATA 57.445 32.000 19.55 4.10 39.55 0.98
1999 2385 7.555306 TGCTTATGTGGCACGTATTTAATAA 57.445 32.000 19.55 11.27 34.56 1.40
2000 2386 7.986562 TGCTTATGTGGCACGTATTTAATAAA 58.013 30.769 19.55 4.06 34.56 1.40
2001 2387 8.459635 TGCTTATGTGGCACGTATTTAATAAAA 58.540 29.630 19.55 3.37 34.56 1.52
2002 2388 9.291664 GCTTATGTGGCACGTATTTAATAAAAA 57.708 29.630 19.55 2.68 0.00 1.94
2006 2392 8.325421 TGTGGCACGTATTTAATAAAAAGAGA 57.675 30.769 13.77 0.00 0.00 3.10
2007 2393 8.447833 TGTGGCACGTATTTAATAAAAAGAGAG 58.552 33.333 13.77 0.00 0.00 3.20
2008 2394 7.908601 GTGGCACGTATTTAATAAAAAGAGAGG 59.091 37.037 0.00 0.00 0.00 3.69
2009 2395 7.608761 TGGCACGTATTTAATAAAAAGAGAGGT 59.391 33.333 0.00 0.00 0.00 3.85
2010 2396 7.908601 GGCACGTATTTAATAAAAAGAGAGGTG 59.091 37.037 0.00 0.00 0.00 4.00
2011 2397 8.448615 GCACGTATTTAATAAAAAGAGAGGTGT 58.551 33.333 0.00 0.00 0.00 4.16
2017 2403 9.981114 ATTTAATAAAAAGAGAGGTGTTTGTGG 57.019 29.630 0.00 0.00 0.00 4.17
2018 2404 8.528044 TTAATAAAAAGAGAGGTGTTTGTGGT 57.472 30.769 0.00 0.00 0.00 4.16
2019 2405 9.629878 TTAATAAAAAGAGAGGTGTTTGTGGTA 57.370 29.630 0.00 0.00 0.00 3.25
2020 2406 8.528044 AATAAAAAGAGAGGTGTTTGTGGTAA 57.472 30.769 0.00 0.00 0.00 2.85
2021 2407 5.830000 AAAAGAGAGGTGTTTGTGGTAAC 57.170 39.130 0.00 0.00 0.00 2.50
2022 2408 4.772886 AAGAGAGGTGTTTGTGGTAACT 57.227 40.909 0.00 0.00 37.61 2.24
2023 2409 5.881923 AAGAGAGGTGTTTGTGGTAACTA 57.118 39.130 0.00 0.00 37.61 2.24
2024 2410 5.881923 AGAGAGGTGTTTGTGGTAACTAA 57.118 39.130 0.00 0.00 37.61 2.24
2025 2411 5.608449 AGAGAGGTGTTTGTGGTAACTAAC 58.392 41.667 0.00 0.00 40.90 2.34
2026 2412 5.365895 AGAGAGGTGTTTGTGGTAACTAACT 59.634 40.000 5.14 0.00 41.05 2.24
2027 2413 6.552350 AGAGAGGTGTTTGTGGTAACTAACTA 59.448 38.462 5.14 0.00 41.05 2.24
2028 2414 7.070322 AGAGAGGTGTTTGTGGTAACTAACTAA 59.930 37.037 5.14 0.00 41.05 2.24
2029 2415 7.215085 AGAGGTGTTTGTGGTAACTAACTAAG 58.785 38.462 5.14 0.00 41.05 2.18
2030 2416 6.892485 AGGTGTTTGTGGTAACTAACTAAGT 58.108 36.000 5.14 0.00 41.05 2.24
2032 2418 8.485392 AGGTGTTTGTGGTAACTAACTAAGTTA 58.515 33.333 5.14 0.00 46.85 2.24
2043 2429 6.594788 ACTAACTAAGTTACCGGAACATCA 57.405 37.500 9.46 0.00 40.86 3.07
2044 2430 6.393171 ACTAACTAAGTTACCGGAACATCAC 58.607 40.000 9.46 0.00 40.86 3.06
2045 2431 4.877378 ACTAAGTTACCGGAACATCACA 57.123 40.909 9.46 0.00 40.86 3.58
2046 2432 4.563061 ACTAAGTTACCGGAACATCACAC 58.437 43.478 9.46 0.00 40.86 3.82
2047 2433 3.478857 AAGTTACCGGAACATCACACA 57.521 42.857 9.46 0.00 40.86 3.72
2048 2434 2.762745 AGTTACCGGAACATCACACAC 58.237 47.619 9.46 0.00 40.86 3.82
2049 2435 2.367567 AGTTACCGGAACATCACACACT 59.632 45.455 9.46 0.00 40.86 3.55
2050 2436 2.735134 GTTACCGGAACATCACACACTC 59.265 50.000 9.46 0.00 38.02 3.51
2051 2437 0.034896 ACCGGAACATCACACACTCC 59.965 55.000 9.46 0.00 0.00 3.85
2052 2438 0.034756 CCGGAACATCACACACTCCA 59.965 55.000 0.00 0.00 0.00 3.86
2053 2439 1.542328 CCGGAACATCACACACTCCAA 60.542 52.381 0.00 0.00 0.00 3.53
2054 2440 1.531149 CGGAACATCACACACTCCAAC 59.469 52.381 0.00 0.00 0.00 3.77
2055 2441 2.571212 GGAACATCACACACTCCAACA 58.429 47.619 0.00 0.00 0.00 3.33
2056 2442 2.948979 GGAACATCACACACTCCAACAA 59.051 45.455 0.00 0.00 0.00 2.83
2057 2443 3.380004 GGAACATCACACACTCCAACAAA 59.620 43.478 0.00 0.00 0.00 2.83
2058 2444 4.351192 GAACATCACACACTCCAACAAAC 58.649 43.478 0.00 0.00 0.00 2.93
2059 2445 3.351740 ACATCACACACTCCAACAAACA 58.648 40.909 0.00 0.00 0.00 2.83
2060 2446 3.761218 ACATCACACACTCCAACAAACAA 59.239 39.130 0.00 0.00 0.00 2.83
2061 2447 4.402155 ACATCACACACTCCAACAAACAAT 59.598 37.500 0.00 0.00 0.00 2.71
2062 2448 4.368874 TCACACACTCCAACAAACAATG 57.631 40.909 0.00 0.00 0.00 2.82
2063 2449 4.013050 TCACACACTCCAACAAACAATGA 58.987 39.130 0.00 0.00 0.00 2.57
2064 2450 4.096231 TCACACACTCCAACAAACAATGAG 59.904 41.667 0.00 0.00 0.00 2.90
2065 2451 4.016444 ACACACTCCAACAAACAATGAGT 58.984 39.130 0.00 0.00 36.77 3.41
2066 2452 4.096382 ACACACTCCAACAAACAATGAGTC 59.904 41.667 0.00 0.00 34.21 3.36
2067 2453 4.336433 CACACTCCAACAAACAATGAGTCT 59.664 41.667 0.00 0.00 34.21 3.24
2068 2454 5.527214 CACACTCCAACAAACAATGAGTCTA 59.473 40.000 0.00 0.00 34.21 2.59
2069 2455 6.205464 CACACTCCAACAAACAATGAGTCTAT 59.795 38.462 0.00 0.00 34.21 1.98
2070 2456 7.387673 CACACTCCAACAAACAATGAGTCTATA 59.612 37.037 0.00 0.00 34.21 1.31
2071 2457 7.936847 ACACTCCAACAAACAATGAGTCTATAA 59.063 33.333 0.00 0.00 34.21 0.98
2072 2458 8.230486 CACTCCAACAAACAATGAGTCTATAAC 58.770 37.037 0.00 0.00 34.21 1.89
2073 2459 7.390718 ACTCCAACAAACAATGAGTCTATAACC 59.609 37.037 0.00 0.00 30.81 2.85
2074 2460 7.458397 TCCAACAAACAATGAGTCTATAACCT 58.542 34.615 0.00 0.00 0.00 3.50
2075 2461 8.598916 TCCAACAAACAATGAGTCTATAACCTA 58.401 33.333 0.00 0.00 0.00 3.08
2076 2462 9.226606 CCAACAAACAATGAGTCTATAACCTAA 57.773 33.333 0.00 0.00 0.00 2.69
2095 2481 8.445275 AACCTAATAAATACATCGTTGCATGA 57.555 30.769 0.00 0.00 0.00 3.07
2096 2482 7.861630 ACCTAATAAATACATCGTTGCATGAC 58.138 34.615 0.00 0.00 0.00 3.06
2097 2483 7.497579 ACCTAATAAATACATCGTTGCATGACA 59.502 33.333 0.00 0.00 0.00 3.58
2098 2484 7.798516 CCTAATAAATACATCGTTGCATGACAC 59.201 37.037 0.00 0.00 0.00 3.67
2099 2485 6.925610 ATAAATACATCGTTGCATGACACT 57.074 33.333 0.00 0.00 0.00 3.55
2100 2486 8.432110 AATAAATACATCGTTGCATGACACTA 57.568 30.769 0.00 0.00 0.00 2.74
2101 2487 5.718649 AATACATCGTTGCATGACACTAC 57.281 39.130 0.00 0.00 0.00 2.73
2102 2488 3.038788 ACATCGTTGCATGACACTACA 57.961 42.857 0.00 0.00 0.00 2.74
2103 2489 3.599343 ACATCGTTGCATGACACTACAT 58.401 40.909 0.00 0.00 0.00 2.29
2104 2490 4.754322 ACATCGTTGCATGACACTACATA 58.246 39.130 0.00 0.00 0.00 2.29
2105 2491 4.805719 ACATCGTTGCATGACACTACATAG 59.194 41.667 0.00 0.00 0.00 2.23
2106 2492 4.712122 TCGTTGCATGACACTACATAGA 57.288 40.909 0.00 0.00 0.00 1.98
2107 2493 5.262588 TCGTTGCATGACACTACATAGAT 57.737 39.130 0.00 0.00 0.00 1.98
2108 2494 5.043248 TCGTTGCATGACACTACATAGATG 58.957 41.667 0.00 0.00 0.00 2.90
2109 2495 4.805719 CGTTGCATGACACTACATAGATGT 59.194 41.667 0.00 0.08 44.48 3.06
2110 2496 5.291858 CGTTGCATGACACTACATAGATGTT 59.708 40.000 0.00 0.00 41.97 2.71
2111 2497 6.508563 CGTTGCATGACACTACATAGATGTTC 60.509 42.308 0.00 0.00 41.97 3.18
2112 2498 5.359756 TGCATGACACTACATAGATGTTCC 58.640 41.667 0.00 0.00 41.97 3.62
2113 2499 5.129320 TGCATGACACTACATAGATGTTCCT 59.871 40.000 0.00 0.00 41.97 3.36
2114 2500 6.323739 TGCATGACACTACATAGATGTTCCTA 59.676 38.462 0.00 0.00 41.97 2.94
2115 2501 6.642950 GCATGACACTACATAGATGTTCCTAC 59.357 42.308 0.00 0.00 41.97 3.18
2116 2502 6.710597 TGACACTACATAGATGTTCCTACC 57.289 41.667 0.00 0.00 41.97 3.18
2117 2503 5.597182 TGACACTACATAGATGTTCCTACCC 59.403 44.000 0.00 0.00 41.97 3.69
2118 2504 5.525484 ACACTACATAGATGTTCCTACCCA 58.475 41.667 0.00 0.00 41.97 4.51
2119 2505 5.363005 ACACTACATAGATGTTCCTACCCAC 59.637 44.000 0.00 0.00 41.97 4.61
2120 2506 5.598830 CACTACATAGATGTTCCTACCCACT 59.401 44.000 0.00 0.00 41.97 4.00
2121 2507 6.776116 CACTACATAGATGTTCCTACCCACTA 59.224 42.308 0.00 0.00 41.97 2.74
2122 2508 7.451877 CACTACATAGATGTTCCTACCCACTAT 59.548 40.741 0.00 0.00 41.97 2.12
2123 2509 6.672266 ACATAGATGTTCCTACCCACTATG 57.328 41.667 0.00 0.00 37.90 2.23
2124 2510 5.544176 ACATAGATGTTCCTACCCACTATGG 59.456 44.000 0.81 0.00 37.90 2.74
2125 2511 4.280789 AGATGTTCCTACCCACTATGGA 57.719 45.455 0.00 0.00 40.96 3.41
2126 2512 4.227197 AGATGTTCCTACCCACTATGGAG 58.773 47.826 0.00 0.00 40.96 3.86
2127 2513 2.759355 TGTTCCTACCCACTATGGAGG 58.241 52.381 0.00 0.00 40.96 4.30
2128 2514 2.045326 TGTTCCTACCCACTATGGAGGT 59.955 50.000 0.00 1.66 40.96 3.85
2129 2515 3.272818 TGTTCCTACCCACTATGGAGGTA 59.727 47.826 0.00 3.53 40.96 3.08
2135 2521 4.341863 ACCCACTATGGAGGTAGTAACA 57.658 45.455 0.00 0.00 40.96 2.41
2136 2522 4.892198 ACCCACTATGGAGGTAGTAACAT 58.108 43.478 0.00 0.00 40.96 2.71
2137 2523 6.034442 ACCCACTATGGAGGTAGTAACATA 57.966 41.667 0.00 0.00 40.96 2.29
2138 2524 6.075984 ACCCACTATGGAGGTAGTAACATAG 58.924 44.000 8.52 8.52 45.07 2.23
2144 2530 8.795842 CTATGGAGGTAGTAACATAGTCTAGG 57.204 42.308 0.00 0.00 38.48 3.02
2145 2531 5.950023 TGGAGGTAGTAACATAGTCTAGGG 58.050 45.833 0.00 0.00 0.00 3.53
2146 2532 5.673574 TGGAGGTAGTAACATAGTCTAGGGA 59.326 44.000 0.00 0.00 0.00 4.20
2147 2533 6.160992 TGGAGGTAGTAACATAGTCTAGGGAA 59.839 42.308 0.00 0.00 0.00 3.97
2148 2534 6.716173 GGAGGTAGTAACATAGTCTAGGGAAG 59.284 46.154 0.00 0.00 0.00 3.46
2149 2535 7.223472 AGGTAGTAACATAGTCTAGGGAAGT 57.777 40.000 0.00 0.00 0.00 3.01
2150 2536 7.061688 AGGTAGTAACATAGTCTAGGGAAGTG 58.938 42.308 0.00 0.00 0.00 3.16
2151 2537 6.832900 GGTAGTAACATAGTCTAGGGAAGTGT 59.167 42.308 0.00 0.00 0.00 3.55
2152 2538 6.777213 AGTAACATAGTCTAGGGAAGTGTG 57.223 41.667 0.00 0.00 0.00 3.82
2153 2539 6.254522 AGTAACATAGTCTAGGGAAGTGTGT 58.745 40.000 0.00 0.00 0.00 3.72
2154 2540 7.408543 AGTAACATAGTCTAGGGAAGTGTGTA 58.591 38.462 0.00 0.00 0.00 2.90
2155 2541 7.892241 AGTAACATAGTCTAGGGAAGTGTGTAA 59.108 37.037 0.00 0.00 0.00 2.41
2156 2542 6.777213 ACATAGTCTAGGGAAGTGTGTAAG 57.223 41.667 0.00 0.00 0.00 2.34
2157 2543 6.254522 ACATAGTCTAGGGAAGTGTGTAAGT 58.745 40.000 0.00 0.00 0.00 2.24
2158 2544 6.724905 ACATAGTCTAGGGAAGTGTGTAAGTT 59.275 38.462 0.00 0.00 0.00 2.66
2159 2545 7.892241 ACATAGTCTAGGGAAGTGTGTAAGTTA 59.108 37.037 0.00 0.00 0.00 2.24
2160 2546 6.587206 AGTCTAGGGAAGTGTGTAAGTTAC 57.413 41.667 6.06 6.06 0.00 2.50
2161 2547 6.313324 AGTCTAGGGAAGTGTGTAAGTTACT 58.687 40.000 14.00 0.00 0.00 2.24
2162 2548 7.465116 AGTCTAGGGAAGTGTGTAAGTTACTA 58.535 38.462 14.00 1.06 0.00 1.82
2163 2549 7.611079 AGTCTAGGGAAGTGTGTAAGTTACTAG 59.389 40.741 14.00 4.64 33.84 2.57
2164 2550 5.402997 AGGGAAGTGTGTAAGTTACTAGC 57.597 43.478 14.00 5.48 0.00 3.42
2165 2551 5.085219 AGGGAAGTGTGTAAGTTACTAGCT 58.915 41.667 14.00 6.35 0.00 3.32
2166 2552 5.543020 AGGGAAGTGTGTAAGTTACTAGCTT 59.457 40.000 14.00 13.25 0.00 3.74
2167 2553 6.723052 AGGGAAGTGTGTAAGTTACTAGCTTA 59.277 38.462 14.00 0.00 0.00 3.09
2168 2554 7.399478 AGGGAAGTGTGTAAGTTACTAGCTTAT 59.601 37.037 14.00 3.60 32.01 1.73
2169 2555 7.491696 GGGAAGTGTGTAAGTTACTAGCTTATG 59.508 40.741 14.00 0.00 32.01 1.90
2170 2556 8.033626 GGAAGTGTGTAAGTTACTAGCTTATGT 58.966 37.037 14.00 0.00 32.01 2.29
2171 2557 9.420551 GAAGTGTGTAAGTTACTAGCTTATGTT 57.579 33.333 14.00 0.00 32.01 2.71
2172 2558 8.983307 AGTGTGTAAGTTACTAGCTTATGTTC 57.017 34.615 14.00 0.00 32.01 3.18
2173 2559 8.804204 AGTGTGTAAGTTACTAGCTTATGTTCT 58.196 33.333 14.00 0.00 32.01 3.01
2174 2560 9.420551 GTGTGTAAGTTACTAGCTTATGTTCTT 57.579 33.333 14.00 1.42 32.01 2.52
2175 2561 9.419297 TGTGTAAGTTACTAGCTTATGTTCTTG 57.581 33.333 14.00 0.00 32.01 3.02
2176 2562 8.381387 GTGTAAGTTACTAGCTTATGTTCTTGC 58.619 37.037 14.00 3.08 32.01 4.01
2177 2563 8.311836 TGTAAGTTACTAGCTTATGTTCTTGCT 58.688 33.333 14.00 0.00 39.30 3.91
2178 2564 7.835634 AAGTTACTAGCTTATGTTCTTGCTC 57.164 36.000 0.00 0.00 37.02 4.26
2179 2565 6.936279 AGTTACTAGCTTATGTTCTTGCTCA 58.064 36.000 0.00 0.00 37.02 4.26
2180 2566 7.560368 AGTTACTAGCTTATGTTCTTGCTCAT 58.440 34.615 0.00 0.00 37.02 2.90
2181 2567 8.043710 AGTTACTAGCTTATGTTCTTGCTCATT 58.956 33.333 0.00 0.00 37.02 2.57
2182 2568 6.674694 ACTAGCTTATGTTCTTGCTCATTG 57.325 37.500 0.00 0.00 37.02 2.82
2183 2569 6.176183 ACTAGCTTATGTTCTTGCTCATTGT 58.824 36.000 0.00 0.00 37.02 2.71
2184 2570 5.306532 AGCTTATGTTCTTGCTCATTGTG 57.693 39.130 0.00 0.00 0.00 3.33
2185 2571 5.005740 AGCTTATGTTCTTGCTCATTGTGA 58.994 37.500 0.00 0.00 0.00 3.58
2186 2572 5.091431 GCTTATGTTCTTGCTCATTGTGAC 58.909 41.667 0.00 0.00 0.00 3.67
2187 2573 5.627499 TTATGTTCTTGCTCATTGTGACC 57.373 39.130 0.00 0.00 0.00 4.02
2188 2574 2.929641 TGTTCTTGCTCATTGTGACCA 58.070 42.857 0.00 0.00 0.00 4.02
2189 2575 2.880268 TGTTCTTGCTCATTGTGACCAG 59.120 45.455 0.00 0.00 0.00 4.00
2190 2576 1.527034 TCTTGCTCATTGTGACCAGC 58.473 50.000 0.00 0.00 0.00 4.85
2191 2577 0.524862 CTTGCTCATTGTGACCAGCC 59.475 55.000 0.00 0.00 0.00 4.85
2192 2578 0.111061 TTGCTCATTGTGACCAGCCT 59.889 50.000 0.00 0.00 0.00 4.58
2193 2579 0.983467 TGCTCATTGTGACCAGCCTA 59.017 50.000 0.00 0.00 0.00 3.93
2194 2580 1.350684 TGCTCATTGTGACCAGCCTAA 59.649 47.619 0.00 0.00 0.00 2.69
2195 2581 2.012673 GCTCATTGTGACCAGCCTAAG 58.987 52.381 0.00 0.00 0.00 2.18
2196 2582 2.636830 CTCATTGTGACCAGCCTAAGG 58.363 52.381 0.00 0.00 0.00 2.69
2206 2592 4.141344 TGACCAGCCTAAGGTTTACTTTGT 60.141 41.667 0.00 0.00 40.09 2.83
2287 2673 7.408132 TCTTGAAGATTTGTCTAGTGTTTCG 57.592 36.000 0.00 0.00 0.00 3.46
2288 2674 6.423905 TCTTGAAGATTTGTCTAGTGTTTCGG 59.576 38.462 0.00 0.00 0.00 4.30
2289 2675 5.607477 TGAAGATTTGTCTAGTGTTTCGGT 58.393 37.500 0.00 0.00 0.00 4.69
2290 2676 6.053005 TGAAGATTTGTCTAGTGTTTCGGTT 58.947 36.000 0.00 0.00 0.00 4.44
2291 2677 6.540914 TGAAGATTTGTCTAGTGTTTCGGTTT 59.459 34.615 0.00 0.00 0.00 3.27
2295 2681 7.929785 AGATTTGTCTAGTGTTTCGGTTTTCTA 59.070 33.333 0.00 0.00 0.00 2.10
2307 2693 3.430895 TCGGTTTTCTATCTCGTTGCAAC 59.569 43.478 19.89 19.89 0.00 4.17
2324 2710 7.823692 CGTTGCAACGTTTTTAATTTCTTACT 58.176 30.769 37.16 0.00 46.63 2.24
2325 2711 7.988859 CGTTGCAACGTTTTTAATTTCTTACTC 59.011 33.333 37.16 1.82 46.63 2.59
2326 2712 7.917720 TGCAACGTTTTTAATTTCTTACTCC 57.082 32.000 0.00 0.00 0.00 3.85
2328 2714 7.858879 TGCAACGTTTTTAATTTCTTACTCCTC 59.141 33.333 0.00 0.00 0.00 3.71
2329 2715 7.325338 GCAACGTTTTTAATTTCTTACTCCTCC 59.675 37.037 0.00 0.00 0.00 4.30
2330 2716 8.347035 CAACGTTTTTAATTTCTTACTCCTCCA 58.653 33.333 0.00 0.00 0.00 3.86
2334 2720 9.856488 GTTTTTAATTTCTTACTCCTCCATTCC 57.144 33.333 0.00 0.00 0.00 3.01
2336 2722 8.575649 TTTAATTTCTTACTCCTCCATTCCAC 57.424 34.615 0.00 0.00 0.00 4.02
2337 2723 6.394345 AATTTCTTACTCCTCCATTCCACT 57.606 37.500 0.00 0.00 0.00 4.00
2338 2724 7.510675 AATTTCTTACTCCTCCATTCCACTA 57.489 36.000 0.00 0.00 0.00 2.74
2339 2725 6.945636 TTTCTTACTCCTCCATTCCACTAA 57.054 37.500 0.00 0.00 0.00 2.24
2340 2726 6.546428 TTCTTACTCCTCCATTCCACTAAG 57.454 41.667 0.00 0.00 0.00 2.18
2341 2727 4.406003 TCTTACTCCTCCATTCCACTAAGC 59.594 45.833 0.00 0.00 0.00 3.09
2342 2728 1.840635 ACTCCTCCATTCCACTAAGCC 59.159 52.381 0.00 0.00 0.00 4.35
2343 2729 1.141858 CTCCTCCATTCCACTAAGCCC 59.858 57.143 0.00 0.00 0.00 5.19
2344 2730 0.179045 CCTCCATTCCACTAAGCCCG 60.179 60.000 0.00 0.00 0.00 6.13
2345 2731 0.815615 CTCCATTCCACTAAGCCCGC 60.816 60.000 0.00 0.00 0.00 6.13
2346 2732 2.180204 CCATTCCACTAAGCCCGCG 61.180 63.158 0.00 0.00 0.00 6.46
2347 2733 2.513897 ATTCCACTAAGCCCGCGC 60.514 61.111 0.00 0.00 0.00 6.86
2356 2742 3.365265 AGCCCGCGCTTTTCAAGG 61.365 61.111 5.56 0.00 45.55 3.61
2357 2743 3.670377 GCCCGCGCTTTTCAAGGT 61.670 61.111 5.56 0.00 0.00 3.50
2358 2744 2.561373 CCCGCGCTTTTCAAGGTC 59.439 61.111 5.56 0.00 0.00 3.85
2359 2745 1.966451 CCCGCGCTTTTCAAGGTCT 60.966 57.895 5.56 0.00 0.00 3.85
2360 2746 0.672401 CCCGCGCTTTTCAAGGTCTA 60.672 55.000 5.56 0.00 0.00 2.59
2361 2747 1.153353 CCGCGCTTTTCAAGGTCTAA 58.847 50.000 5.56 0.00 0.00 2.10
2362 2748 1.136057 CCGCGCTTTTCAAGGTCTAAC 60.136 52.381 5.56 0.00 0.00 2.34
2363 2749 1.798813 CGCGCTTTTCAAGGTCTAACT 59.201 47.619 5.56 0.00 0.00 2.24
2364 2750 2.223377 CGCGCTTTTCAAGGTCTAACTT 59.777 45.455 5.56 0.00 0.00 2.66
2365 2751 3.303791 CGCGCTTTTCAAGGTCTAACTTT 60.304 43.478 5.56 0.00 0.00 2.66
2366 2752 3.975035 GCGCTTTTCAAGGTCTAACTTTG 59.025 43.478 0.00 0.00 36.63 2.77
2367 2753 4.261031 GCGCTTTTCAAGGTCTAACTTTGA 60.261 41.667 0.00 1.03 41.53 2.69
2368 2754 5.205565 CGCTTTTCAAGGTCTAACTTTGAC 58.794 41.667 4.37 0.00 42.67 3.18
2385 2771 8.980143 AACTTTGACCATAAATTTATCCAACG 57.020 30.769 7.76 11.54 0.00 4.10
2386 2772 8.343168 ACTTTGACCATAAATTTATCCAACGA 57.657 30.769 7.76 0.00 0.00 3.85
2387 2773 8.458843 ACTTTGACCATAAATTTATCCAACGAG 58.541 33.333 7.76 9.74 0.00 4.18
2388 2774 8.568676 TTTGACCATAAATTTATCCAACGAGA 57.431 30.769 7.76 0.00 0.00 4.04
2389 2775 7.548196 TGACCATAAATTTATCCAACGAGAC 57.452 36.000 7.76 0.00 0.00 3.36
2390 2776 6.540914 TGACCATAAATTTATCCAACGAGACC 59.459 38.462 7.76 0.00 0.00 3.85
2391 2777 5.526111 ACCATAAATTTATCCAACGAGACCG 59.474 40.000 7.76 0.00 42.50 4.79
2392 2778 5.756347 CCATAAATTTATCCAACGAGACCGA 59.244 40.000 7.76 0.00 39.50 4.69
2393 2779 6.292703 CCATAAATTTATCCAACGAGACCGAC 60.293 42.308 7.76 0.00 39.50 4.79
2394 2780 4.467198 AATTTATCCAACGAGACCGACT 57.533 40.909 0.00 0.00 39.50 4.18
2395 2781 2.933495 TTATCCAACGAGACCGACTG 57.067 50.000 0.00 0.00 39.50 3.51
2396 2782 0.454600 TATCCAACGAGACCGACTGC 59.545 55.000 0.00 0.00 39.50 4.40
2397 2783 2.543687 ATCCAACGAGACCGACTGCG 62.544 60.000 0.00 0.00 39.50 5.18
2407 2793 4.354155 CGACTGCGGTGGAAGAAA 57.646 55.556 0.80 0.00 0.00 2.52
2408 2794 2.612200 CGACTGCGGTGGAAGAAAA 58.388 52.632 0.80 0.00 0.00 2.29
2409 2795 0.941542 CGACTGCGGTGGAAGAAAAA 59.058 50.000 0.80 0.00 0.00 1.94
2465 2851 9.846248 ACAAATTCACTGATATAACTTTTGCTC 57.154 29.630 0.00 0.00 0.00 4.26
2466 2852 9.294030 CAAATTCACTGATATAACTTTTGCTCC 57.706 33.333 0.00 0.00 0.00 4.70
2467 2853 7.573968 ATTCACTGATATAACTTTTGCTCCC 57.426 36.000 0.00 0.00 0.00 4.30
2468 2854 6.061022 TCACTGATATAACTTTTGCTCCCA 57.939 37.500 0.00 0.00 0.00 4.37
2469 2855 5.880332 TCACTGATATAACTTTTGCTCCCAC 59.120 40.000 0.00 0.00 0.00 4.61
2470 2856 5.066505 CACTGATATAACTTTTGCTCCCACC 59.933 44.000 0.00 0.00 0.00 4.61
2471 2857 4.196193 TGATATAACTTTTGCTCCCACCG 58.804 43.478 0.00 0.00 0.00 4.94
2472 2858 2.579410 ATAACTTTTGCTCCCACCGT 57.421 45.000 0.00 0.00 0.00 4.83
2473 2859 3.706600 ATAACTTTTGCTCCCACCGTA 57.293 42.857 0.00 0.00 0.00 4.02
2474 2860 1.892209 AACTTTTGCTCCCACCGTAG 58.108 50.000 0.00 0.00 0.00 3.51
2475 2861 0.763035 ACTTTTGCTCCCACCGTAGT 59.237 50.000 0.00 0.00 0.00 2.73
2476 2862 1.270678 ACTTTTGCTCCCACCGTAGTC 60.271 52.381 0.00 0.00 0.00 2.59
2477 2863 0.320073 TTTTGCTCCCACCGTAGTCG 60.320 55.000 0.00 0.00 0.00 4.18
2488 2874 3.879912 CGTAGTCGGTCTTGTTGGT 57.120 52.632 0.00 0.00 0.00 3.67
2489 2875 2.144482 CGTAGTCGGTCTTGTTGGTT 57.856 50.000 0.00 0.00 0.00 3.67
2490 2876 3.287312 CGTAGTCGGTCTTGTTGGTTA 57.713 47.619 0.00 0.00 0.00 2.85
2491 2877 3.641648 CGTAGTCGGTCTTGTTGGTTAA 58.358 45.455 0.00 0.00 0.00 2.01
2492 2878 4.050553 CGTAGTCGGTCTTGTTGGTTAAA 58.949 43.478 0.00 0.00 0.00 1.52
2493 2879 4.687483 CGTAGTCGGTCTTGTTGGTTAAAT 59.313 41.667 0.00 0.00 0.00 1.40
2494 2880 5.178067 CGTAGTCGGTCTTGTTGGTTAAATT 59.822 40.000 0.00 0.00 0.00 1.82
2495 2881 6.293027 CGTAGTCGGTCTTGTTGGTTAAATTT 60.293 38.462 0.00 0.00 0.00 1.82
2496 2882 7.095691 CGTAGTCGGTCTTGTTGGTTAAATTTA 60.096 37.037 0.00 0.00 0.00 1.40
2497 2883 7.754851 AGTCGGTCTTGTTGGTTAAATTTAT 57.245 32.000 0.00 0.00 0.00 1.40
2498 2884 7.590279 AGTCGGTCTTGTTGGTTAAATTTATG 58.410 34.615 0.00 0.00 0.00 1.90
2499 2885 7.446013 AGTCGGTCTTGTTGGTTAAATTTATGA 59.554 33.333 0.00 0.00 0.00 2.15
2500 2886 8.241367 GTCGGTCTTGTTGGTTAAATTTATGAT 58.759 33.333 0.00 0.00 0.00 2.45
2501 2887 8.455682 TCGGTCTTGTTGGTTAAATTTATGATC 58.544 33.333 0.00 0.00 0.00 2.92
2502 2888 8.240682 CGGTCTTGTTGGTTAAATTTATGATCA 58.759 33.333 0.00 0.00 0.00 2.92
2503 2889 9.921637 GGTCTTGTTGGTTAAATTTATGATCAA 57.078 29.630 0.00 0.00 0.00 2.57
2518 2904 9.699410 ATTTATGATCAAAGTTGAACTATGGGA 57.301 29.630 0.00 0.00 41.13 4.37
2519 2905 9.527157 TTTATGATCAAAGTTGAACTATGGGAA 57.473 29.630 0.00 0.00 41.13 3.97
2520 2906 7.636150 ATGATCAAAGTTGAACTATGGGAAG 57.364 36.000 0.00 0.00 41.13 3.46
2521 2907 6.778821 TGATCAAAGTTGAACTATGGGAAGA 58.221 36.000 0.00 0.00 41.13 2.87
2522 2908 7.230747 TGATCAAAGTTGAACTATGGGAAGAA 58.769 34.615 0.00 0.00 41.13 2.52
2523 2909 7.723616 TGATCAAAGTTGAACTATGGGAAGAAA 59.276 33.333 0.00 0.00 41.13 2.52
2524 2910 7.510549 TCAAAGTTGAACTATGGGAAGAAAG 57.489 36.000 0.00 0.00 33.55 2.62
2525 2911 5.966742 AAGTTGAACTATGGGAAGAAAGC 57.033 39.130 0.00 0.00 0.00 3.51
2526 2912 4.985538 AGTTGAACTATGGGAAGAAAGCA 58.014 39.130 0.00 0.00 0.00 3.91
2527 2913 4.762251 AGTTGAACTATGGGAAGAAAGCAC 59.238 41.667 0.00 0.00 0.00 4.40
2528 2914 4.640771 TGAACTATGGGAAGAAAGCACT 57.359 40.909 0.00 0.00 0.00 4.40
2529 2915 5.755409 TGAACTATGGGAAGAAAGCACTA 57.245 39.130 0.00 0.00 0.00 2.74
2530 2916 5.488341 TGAACTATGGGAAGAAAGCACTAC 58.512 41.667 0.00 0.00 0.00 2.73
2531 2917 5.012664 TGAACTATGGGAAGAAAGCACTACA 59.987 40.000 0.00 0.00 0.00 2.74
2532 2918 5.700402 ACTATGGGAAGAAAGCACTACAT 57.300 39.130 0.00 0.00 0.00 2.29
2533 2919 6.067217 ACTATGGGAAGAAAGCACTACATT 57.933 37.500 0.00 0.00 0.00 2.71
2534 2920 7.195374 ACTATGGGAAGAAAGCACTACATTA 57.805 36.000 0.00 0.00 0.00 1.90
2535 2921 7.806180 ACTATGGGAAGAAAGCACTACATTAT 58.194 34.615 0.00 0.00 0.00 1.28
2536 2922 6.949352 ATGGGAAGAAAGCACTACATTATG 57.051 37.500 0.00 0.00 0.00 1.90
2537 2923 6.061022 TGGGAAGAAAGCACTACATTATGA 57.939 37.500 0.00 0.00 0.00 2.15
2538 2924 6.480763 TGGGAAGAAAGCACTACATTATGAA 58.519 36.000 0.00 0.00 0.00 2.57
2539 2925 6.945435 TGGGAAGAAAGCACTACATTATGAAA 59.055 34.615 0.00 0.00 0.00 2.69
2540 2926 7.094377 TGGGAAGAAAGCACTACATTATGAAAC 60.094 37.037 0.00 0.00 0.00 2.78
2541 2927 6.961554 GGAAGAAAGCACTACATTATGAAACG 59.038 38.462 0.00 0.00 0.00 3.60
2542 2928 7.148474 GGAAGAAAGCACTACATTATGAAACGA 60.148 37.037 0.00 0.00 0.00 3.85
2543 2929 7.667043 AGAAAGCACTACATTATGAAACGAA 57.333 32.000 0.00 0.00 0.00 3.85
2544 2930 7.743104 AGAAAGCACTACATTATGAAACGAAG 58.257 34.615 0.00 0.00 0.00 3.79
2545 2931 6.422776 AAGCACTACATTATGAAACGAAGG 57.577 37.500 0.00 0.00 0.00 3.46
2546 2932 4.876107 AGCACTACATTATGAAACGAAGGG 59.124 41.667 0.00 0.00 0.00 3.95
2547 2933 4.873827 GCACTACATTATGAAACGAAGGGA 59.126 41.667 0.00 0.00 0.00 4.20
2548 2934 5.006746 GCACTACATTATGAAACGAAGGGAG 59.993 44.000 0.00 0.00 0.00 4.30
2549 2935 6.106673 CACTACATTATGAAACGAAGGGAGT 58.893 40.000 0.00 0.00 30.77 3.85
2550 2936 7.262772 CACTACATTATGAAACGAAGGGAGTA 58.737 38.462 0.00 0.00 28.96 2.59
2551 2937 7.926555 CACTACATTATGAAACGAAGGGAGTAT 59.073 37.037 0.00 0.00 28.96 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 1.131928 AACCTTAACCACCCCGCTCT 61.132 55.000 0.00 0.00 0.00 4.09
83 84 1.737816 GGCACCTAATCTCGCCGTA 59.262 57.895 0.00 0.00 34.26 4.02
173 174 4.980805 TTCGTGCACGTGCCCCTC 62.981 66.667 35.72 21.55 41.18 4.30
174 175 4.988598 CTTCGTGCACGTGCCCCT 62.989 66.667 35.72 0.00 41.18 4.79
175 176 4.980805 TCTTCGTGCACGTGCCCC 62.981 66.667 35.72 24.77 41.18 5.80
176 177 3.712881 GTCTTCGTGCACGTGCCC 61.713 66.667 35.72 25.39 41.18 5.36
177 178 1.772063 AAAGTCTTCGTGCACGTGCC 61.772 55.000 35.72 25.12 41.18 5.01
178 179 0.027586 AAAAGTCTTCGTGCACGTGC 59.972 50.000 35.74 33.11 40.80 5.34
275 276 0.892755 ACTATCGAACGACCAGGCAA 59.107 50.000 0.00 0.00 0.00 4.52
284 285 4.421058 TGAAGTTCATGGACTATCGAACG 58.579 43.478 7.19 0.00 42.01 3.95
323 324 1.583054 ACGAACAAAGCACCTCAGAC 58.417 50.000 0.00 0.00 0.00 3.51
462 646 4.100084 TCGCTGAGGCACCATGGG 62.100 66.667 18.09 6.26 38.60 4.00
510 694 0.038599 TGGTGAGCAATGCCACTCAT 59.961 50.000 20.32 0.00 44.29 2.90
590 782 1.071987 CCTGTGCTCACTGCTGGAA 59.928 57.895 1.47 0.00 43.37 3.53
702 895 2.797278 CCGAGGAGTAATGGCGGCT 61.797 63.158 11.43 0.00 35.17 5.52
867 1062 3.547746 GACTAGAGAGTAGTCCTGTGGG 58.452 54.545 0.00 0.00 38.33 4.61
872 1067 3.446873 TCGAACGACTAGAGAGTAGTCCT 59.553 47.826 0.00 0.00 40.27 3.85
873 1068 3.779759 TCGAACGACTAGAGAGTAGTCC 58.220 50.000 0.00 0.00 40.27 3.85
875 1070 4.043750 CGATCGAACGACTAGAGAGTAGT 58.956 47.826 10.26 0.00 42.66 2.73
876 1071 4.289342 TCGATCGAACGACTAGAGAGTAG 58.711 47.826 16.99 0.00 35.45 2.57
877 1072 4.298744 TCGATCGAACGACTAGAGAGTA 57.701 45.455 16.99 0.00 35.45 2.59
878 1073 3.162202 TCGATCGAACGACTAGAGAGT 57.838 47.619 16.99 0.00 39.20 3.24
1005 1217 1.609794 GGAGAGGAGGGACGGTGTT 60.610 63.158 0.00 0.00 0.00 3.32
1101 1313 0.246635 GGAAGCAGAAGTAGGACGCA 59.753 55.000 0.00 0.00 0.00 5.24
1588 1800 1.831736 AGGTGCACCCATGTAGACTAC 59.168 52.381 32.29 5.62 36.42 2.73
1591 1803 0.460284 CGAGGTGCACCCATGTAGAC 60.460 60.000 32.29 12.01 36.42 2.59
1639 1863 4.032786 CAGAACCCTTTTCAACGCAAAAAG 59.967 41.667 9.39 9.39 41.34 2.27
1640 1864 3.929610 CAGAACCCTTTTCAACGCAAAAA 59.070 39.130 0.00 0.00 0.00 1.94
1641 1865 3.056465 ACAGAACCCTTTTCAACGCAAAA 60.056 39.130 0.00 0.00 0.00 2.44
1642 1866 2.494073 ACAGAACCCTTTTCAACGCAAA 59.506 40.909 0.00 0.00 0.00 3.68
1646 1870 6.754675 ACAAATTTACAGAACCCTTTTCAACG 59.245 34.615 0.00 0.00 0.00 4.10
1647 1871 7.043656 CGACAAATTTACAGAACCCTTTTCAAC 60.044 37.037 0.00 0.00 0.00 3.18
1648 1872 6.975772 CGACAAATTTACAGAACCCTTTTCAA 59.024 34.615 0.00 0.00 0.00 2.69
1649 1873 6.319152 TCGACAAATTTACAGAACCCTTTTCA 59.681 34.615 0.00 0.00 0.00 2.69
1650 1874 6.731164 TCGACAAATTTACAGAACCCTTTTC 58.269 36.000 0.00 0.00 0.00 2.29
1651 1875 6.702716 TCGACAAATTTACAGAACCCTTTT 57.297 33.333 0.00 0.00 0.00 2.27
1652 1876 6.894339 ATCGACAAATTTACAGAACCCTTT 57.106 33.333 0.00 0.00 0.00 3.11
1679 1903 6.158695 ACTCCTTATGTGTCCTTACCAATCAT 59.841 38.462 0.00 0.00 0.00 2.45
1698 1922 4.768968 TCGTACTAGCACCTAAAACTCCTT 59.231 41.667 0.00 0.00 0.00 3.36
1904 2290 0.038526 CGGCCTTATGTAGCGGTAGG 60.039 60.000 0.00 0.00 0.00 3.18
1909 2295 0.874607 GTGACCGGCCTTATGTAGCG 60.875 60.000 0.00 0.00 0.00 4.26
1921 2307 0.613853 TTCCTCCCTACTGTGACCGG 60.614 60.000 0.00 0.00 0.00 5.28
1922 2308 0.531200 GTTCCTCCCTACTGTGACCG 59.469 60.000 0.00 0.00 0.00 4.79
1923 2309 1.939980 AGTTCCTCCCTACTGTGACC 58.060 55.000 0.00 0.00 0.00 4.02
1924 2310 3.447944 CCTAAGTTCCTCCCTACTGTGAC 59.552 52.174 0.00 0.00 0.00 3.67
1925 2311 3.335786 TCCTAAGTTCCTCCCTACTGTGA 59.664 47.826 0.00 0.00 0.00 3.58
1926 2312 3.702045 CTCCTAAGTTCCTCCCTACTGTG 59.298 52.174 0.00 0.00 0.00 3.66
1927 2313 3.337301 ACTCCTAAGTTCCTCCCTACTGT 59.663 47.826 0.00 0.00 28.74 3.55
1928 2314 3.983821 ACTCCTAAGTTCCTCCCTACTG 58.016 50.000 0.00 0.00 28.74 2.74
1929 2315 5.016031 TGTTACTCCTAAGTTCCTCCCTACT 59.984 44.000 0.00 0.00 36.92 2.57
1930 2316 5.267587 TGTTACTCCTAAGTTCCTCCCTAC 58.732 45.833 0.00 0.00 36.92 3.18
1931 2317 5.541258 TGTTACTCCTAAGTTCCTCCCTA 57.459 43.478 0.00 0.00 36.92 3.53
1932 2318 4.415224 TGTTACTCCTAAGTTCCTCCCT 57.585 45.455 0.00 0.00 36.92 4.20
1933 2319 4.715297 TGATGTTACTCCTAAGTTCCTCCC 59.285 45.833 0.00 0.00 36.92 4.30
1934 2320 5.187186 TGTGATGTTACTCCTAAGTTCCTCC 59.813 44.000 0.00 0.00 36.92 4.30
1935 2321 6.282199 TGTGATGTTACTCCTAAGTTCCTC 57.718 41.667 0.00 0.00 36.92 3.71
1936 2322 6.875972 ATGTGATGTTACTCCTAAGTTCCT 57.124 37.500 0.00 0.00 36.92 3.36
1937 2323 7.783042 AGTATGTGATGTTACTCCTAAGTTCC 58.217 38.462 0.00 0.00 36.92 3.62
1938 2324 8.859517 GAGTATGTGATGTTACTCCTAAGTTC 57.140 38.462 0.00 0.00 38.81 3.01
1946 2332 8.818057 GTTGTATTGGAGTATGTGATGTTACTC 58.182 37.037 2.26 2.26 42.27 2.59
1947 2333 8.540388 AGTTGTATTGGAGTATGTGATGTTACT 58.460 33.333 0.00 0.00 0.00 2.24
1948 2334 8.718102 AGTTGTATTGGAGTATGTGATGTTAC 57.282 34.615 0.00 0.00 0.00 2.50
1949 2335 9.733556 AAAGTTGTATTGGAGTATGTGATGTTA 57.266 29.630 0.00 0.00 0.00 2.41
1950 2336 8.514594 CAAAGTTGTATTGGAGTATGTGATGTT 58.485 33.333 0.00 0.00 0.00 2.71
1951 2337 7.362056 GCAAAGTTGTATTGGAGTATGTGATGT 60.362 37.037 0.00 0.00 0.00 3.06
1952 2338 6.968904 GCAAAGTTGTATTGGAGTATGTGATG 59.031 38.462 0.00 0.00 0.00 3.07
1953 2339 6.886459 AGCAAAGTTGTATTGGAGTATGTGAT 59.114 34.615 0.00 0.00 0.00 3.06
1954 2340 6.237901 AGCAAAGTTGTATTGGAGTATGTGA 58.762 36.000 0.00 0.00 0.00 3.58
1955 2341 6.500684 AGCAAAGTTGTATTGGAGTATGTG 57.499 37.500 0.00 0.00 0.00 3.21
1956 2342 8.677300 CATAAGCAAAGTTGTATTGGAGTATGT 58.323 33.333 0.00 0.00 0.00 2.29
1957 2343 8.677300 ACATAAGCAAAGTTGTATTGGAGTATG 58.323 33.333 0.00 0.00 0.00 2.39
1958 2344 8.677300 CACATAAGCAAAGTTGTATTGGAGTAT 58.323 33.333 0.00 0.00 0.00 2.12
1959 2345 7.120579 CCACATAAGCAAAGTTGTATTGGAGTA 59.879 37.037 0.00 0.00 0.00 2.59
1960 2346 6.071952 CCACATAAGCAAAGTTGTATTGGAGT 60.072 38.462 0.00 0.00 0.00 3.85
1961 2347 6.324819 CCACATAAGCAAAGTTGTATTGGAG 58.675 40.000 0.00 0.00 0.00 3.86
1962 2348 5.336372 GCCACATAAGCAAAGTTGTATTGGA 60.336 40.000 0.00 0.00 0.00 3.53
1963 2349 4.864247 GCCACATAAGCAAAGTTGTATTGG 59.136 41.667 0.00 0.00 0.00 3.16
1964 2350 5.345741 GTGCCACATAAGCAAAGTTGTATTG 59.654 40.000 0.00 0.00 43.02 1.90
1965 2351 5.469479 GTGCCACATAAGCAAAGTTGTATT 58.531 37.500 0.00 0.00 43.02 1.89
1966 2352 4.379394 CGTGCCACATAAGCAAAGTTGTAT 60.379 41.667 0.00 0.00 43.02 2.29
1967 2353 3.058570 CGTGCCACATAAGCAAAGTTGTA 60.059 43.478 0.00 0.00 43.02 2.41
1968 2354 2.287547 CGTGCCACATAAGCAAAGTTGT 60.288 45.455 0.00 0.00 43.02 3.32
1969 2355 2.287547 ACGTGCCACATAAGCAAAGTTG 60.288 45.455 0.00 0.00 43.02 3.16
1970 2356 1.953686 ACGTGCCACATAAGCAAAGTT 59.046 42.857 0.00 0.00 43.02 2.66
1971 2357 1.604604 ACGTGCCACATAAGCAAAGT 58.395 45.000 0.00 0.00 43.02 2.66
1972 2358 4.355543 AATACGTGCCACATAAGCAAAG 57.644 40.909 0.00 0.00 43.02 2.77
1973 2359 4.775058 AAATACGTGCCACATAAGCAAA 57.225 36.364 0.00 0.00 43.02 3.68
1974 2360 5.881777 TTAAATACGTGCCACATAAGCAA 57.118 34.783 0.00 0.00 43.02 3.91
1975 2361 7.555306 TTATTAAATACGTGCCACATAAGCA 57.445 32.000 0.00 0.00 38.08 3.91
1976 2362 8.844441 TTTTATTAAATACGTGCCACATAAGC 57.156 30.769 0.00 0.00 0.00 3.09
1980 2366 8.952278 TCTCTTTTTATTAAATACGTGCCACAT 58.048 29.630 0.00 0.00 0.00 3.21
1981 2367 8.325421 TCTCTTTTTATTAAATACGTGCCACA 57.675 30.769 0.00 0.00 0.00 4.17
1982 2368 7.908601 CCTCTCTTTTTATTAAATACGTGCCAC 59.091 37.037 0.00 0.00 0.00 5.01
1983 2369 7.608761 ACCTCTCTTTTTATTAAATACGTGCCA 59.391 33.333 0.00 0.00 0.00 4.92
1984 2370 7.908601 CACCTCTCTTTTTATTAAATACGTGCC 59.091 37.037 0.00 0.00 0.00 5.01
1985 2371 8.448615 ACACCTCTCTTTTTATTAAATACGTGC 58.551 33.333 0.00 0.00 0.00 5.34
1991 2377 9.981114 CCACAAACACCTCTCTTTTTATTAAAT 57.019 29.630 0.00 0.00 0.00 1.40
1992 2378 8.973182 ACCACAAACACCTCTCTTTTTATTAAA 58.027 29.630 0.00 0.00 0.00 1.52
1993 2379 8.528044 ACCACAAACACCTCTCTTTTTATTAA 57.472 30.769 0.00 0.00 0.00 1.40
1994 2380 9.629878 TTACCACAAACACCTCTCTTTTTATTA 57.370 29.630 0.00 0.00 0.00 0.98
1995 2381 8.410912 GTTACCACAAACACCTCTCTTTTTATT 58.589 33.333 0.00 0.00 0.00 1.40
1996 2382 7.778382 AGTTACCACAAACACCTCTCTTTTTAT 59.222 33.333 0.00 0.00 0.00 1.40
1997 2383 7.114095 AGTTACCACAAACACCTCTCTTTTTA 58.886 34.615 0.00 0.00 0.00 1.52
1998 2384 5.949952 AGTTACCACAAACACCTCTCTTTTT 59.050 36.000 0.00 0.00 0.00 1.94
1999 2385 5.506708 AGTTACCACAAACACCTCTCTTTT 58.493 37.500 0.00 0.00 0.00 2.27
2000 2386 5.112129 AGTTACCACAAACACCTCTCTTT 57.888 39.130 0.00 0.00 0.00 2.52
2001 2387 4.772886 AGTTACCACAAACACCTCTCTT 57.227 40.909 0.00 0.00 0.00 2.85
2002 2388 5.365895 AGTTAGTTACCACAAACACCTCTCT 59.634 40.000 0.00 0.00 0.00 3.10
2003 2389 5.608449 AGTTAGTTACCACAAACACCTCTC 58.392 41.667 0.00 0.00 0.00 3.20
2004 2390 5.625568 AGTTAGTTACCACAAACACCTCT 57.374 39.130 0.00 0.00 0.00 3.69
2005 2391 6.988580 ACTTAGTTAGTTACCACAAACACCTC 59.011 38.462 0.00 0.00 31.29 3.85
2006 2392 6.892485 ACTTAGTTAGTTACCACAAACACCT 58.108 36.000 0.00 0.00 31.29 4.00
2007 2393 7.558161 AACTTAGTTAGTTACCACAAACACC 57.442 36.000 0.00 0.00 45.22 4.16
2018 2404 8.028938 GTGATGTTCCGGTAACTTAGTTAGTTA 58.971 37.037 4.92 0.00 45.22 2.24
2020 2406 6.015180 TGTGATGTTCCGGTAACTTAGTTAGT 60.015 38.462 4.92 0.00 38.99 2.24
2021 2407 6.309737 GTGTGATGTTCCGGTAACTTAGTTAG 59.690 42.308 4.92 0.00 38.99 2.34
2022 2408 6.158598 GTGTGATGTTCCGGTAACTTAGTTA 58.841 40.000 0.00 0.03 38.99 2.24
2023 2409 4.992951 GTGTGATGTTCCGGTAACTTAGTT 59.007 41.667 0.00 2.32 38.99 2.24
2024 2410 4.039488 TGTGTGATGTTCCGGTAACTTAGT 59.961 41.667 0.00 0.00 38.99 2.24
2025 2411 4.387862 GTGTGTGATGTTCCGGTAACTTAG 59.612 45.833 0.00 0.00 38.99 2.18
2026 2412 4.039488 AGTGTGTGATGTTCCGGTAACTTA 59.961 41.667 0.00 0.00 38.99 2.24
2027 2413 3.135994 GTGTGTGATGTTCCGGTAACTT 58.864 45.455 0.00 3.15 38.99 2.66
2028 2414 2.367567 AGTGTGTGATGTTCCGGTAACT 59.632 45.455 0.00 0.00 38.99 2.24
2029 2415 2.735134 GAGTGTGTGATGTTCCGGTAAC 59.265 50.000 0.00 5.56 38.67 2.50
2030 2416 2.289195 GGAGTGTGTGATGTTCCGGTAA 60.289 50.000 0.00 0.00 0.00 2.85
2031 2417 1.274167 GGAGTGTGTGATGTTCCGGTA 59.726 52.381 0.00 0.00 0.00 4.02
2032 2418 0.034896 GGAGTGTGTGATGTTCCGGT 59.965 55.000 0.00 0.00 0.00 5.28
2033 2419 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.00 0.00 0.00 5.14
2034 2420 1.531149 GTTGGAGTGTGTGATGTTCCG 59.469 52.381 0.00 0.00 0.00 4.30
2035 2421 2.571212 TGTTGGAGTGTGTGATGTTCC 58.429 47.619 0.00 0.00 0.00 3.62
2036 2422 4.142491 TGTTTGTTGGAGTGTGTGATGTTC 60.142 41.667 0.00 0.00 0.00 3.18
2037 2423 3.761218 TGTTTGTTGGAGTGTGTGATGTT 59.239 39.130 0.00 0.00 0.00 2.71
2038 2424 3.351740 TGTTTGTTGGAGTGTGTGATGT 58.648 40.909 0.00 0.00 0.00 3.06
2039 2425 4.368874 TTGTTTGTTGGAGTGTGTGATG 57.631 40.909 0.00 0.00 0.00 3.07
2040 2426 4.644234 TCATTGTTTGTTGGAGTGTGTGAT 59.356 37.500 0.00 0.00 0.00 3.06
2041 2427 4.013050 TCATTGTTTGTTGGAGTGTGTGA 58.987 39.130 0.00 0.00 0.00 3.58
2042 2428 4.142403 ACTCATTGTTTGTTGGAGTGTGTG 60.142 41.667 0.00 0.00 37.43 3.82
2043 2429 4.016444 ACTCATTGTTTGTTGGAGTGTGT 58.984 39.130 0.00 0.00 37.43 3.72
2044 2430 4.336433 AGACTCATTGTTTGTTGGAGTGTG 59.664 41.667 0.00 0.00 38.82 3.82
2045 2431 4.526970 AGACTCATTGTTTGTTGGAGTGT 58.473 39.130 0.00 0.00 38.82 3.55
2046 2432 6.808008 ATAGACTCATTGTTTGTTGGAGTG 57.192 37.500 0.00 0.00 38.82 3.51
2047 2433 7.390718 GGTTATAGACTCATTGTTTGTTGGAGT 59.609 37.037 0.00 0.00 41.22 3.85
2048 2434 7.607991 AGGTTATAGACTCATTGTTTGTTGGAG 59.392 37.037 0.00 0.00 0.00 3.86
2049 2435 7.458397 AGGTTATAGACTCATTGTTTGTTGGA 58.542 34.615 0.00 0.00 0.00 3.53
2050 2436 7.687941 AGGTTATAGACTCATTGTTTGTTGG 57.312 36.000 0.00 0.00 0.00 3.77
2069 2455 9.549078 TCATGCAACGATGTATTTATTAGGTTA 57.451 29.630 0.00 0.00 28.42 2.85
2070 2456 8.342634 GTCATGCAACGATGTATTTATTAGGTT 58.657 33.333 0.00 0.00 28.42 3.50
2071 2457 7.497579 TGTCATGCAACGATGTATTTATTAGGT 59.502 33.333 0.00 0.00 28.42 3.08
2072 2458 7.798516 GTGTCATGCAACGATGTATTTATTAGG 59.201 37.037 0.00 0.00 28.42 2.69
2073 2459 8.551205 AGTGTCATGCAACGATGTATTTATTAG 58.449 33.333 0.00 0.00 28.42 1.73
2074 2460 8.432110 AGTGTCATGCAACGATGTATTTATTA 57.568 30.769 0.00 0.00 28.42 0.98
2075 2461 7.320443 AGTGTCATGCAACGATGTATTTATT 57.680 32.000 0.00 0.00 28.42 1.40
2076 2462 6.925610 AGTGTCATGCAACGATGTATTTAT 57.074 33.333 0.00 0.00 28.42 1.40
2077 2463 6.814146 TGTAGTGTCATGCAACGATGTATTTA 59.186 34.615 0.00 0.00 28.42 1.40
2078 2464 5.641636 TGTAGTGTCATGCAACGATGTATTT 59.358 36.000 0.00 0.00 28.42 1.40
2079 2465 5.175127 TGTAGTGTCATGCAACGATGTATT 58.825 37.500 0.00 0.00 28.42 1.89
2080 2466 4.754322 TGTAGTGTCATGCAACGATGTAT 58.246 39.130 0.00 0.00 31.41 2.29
2081 2467 4.181309 TGTAGTGTCATGCAACGATGTA 57.819 40.909 0.00 0.00 0.00 2.29
2082 2468 3.038788 TGTAGTGTCATGCAACGATGT 57.961 42.857 0.00 0.00 0.00 3.06
2083 2469 5.043248 TCTATGTAGTGTCATGCAACGATG 58.957 41.667 0.00 0.00 0.00 3.84
2084 2470 5.262588 TCTATGTAGTGTCATGCAACGAT 57.737 39.130 0.00 0.00 0.00 3.73
2085 2471 4.712122 TCTATGTAGTGTCATGCAACGA 57.288 40.909 0.00 0.00 0.00 3.85
2086 2472 4.805719 ACATCTATGTAGTGTCATGCAACG 59.194 41.667 0.00 0.00 39.68 4.10
2087 2473 6.238211 GGAACATCTATGTAGTGTCATGCAAC 60.238 42.308 0.00 0.00 40.80 4.17
2088 2474 5.817296 GGAACATCTATGTAGTGTCATGCAA 59.183 40.000 0.00 0.00 40.80 4.08
2089 2475 5.129320 AGGAACATCTATGTAGTGTCATGCA 59.871 40.000 0.00 0.00 40.80 3.96
2090 2476 5.605534 AGGAACATCTATGTAGTGTCATGC 58.394 41.667 0.00 0.00 40.80 4.06
2091 2477 7.148641 GGTAGGAACATCTATGTAGTGTCATG 58.851 42.308 0.00 0.00 40.80 3.07
2092 2478 6.267928 GGGTAGGAACATCTATGTAGTGTCAT 59.732 42.308 0.00 0.00 40.80 3.06
2093 2479 5.597182 GGGTAGGAACATCTATGTAGTGTCA 59.403 44.000 0.00 0.00 40.80 3.58
2094 2480 5.597182 TGGGTAGGAACATCTATGTAGTGTC 59.403 44.000 0.00 0.00 40.80 3.67
2095 2481 5.363005 GTGGGTAGGAACATCTATGTAGTGT 59.637 44.000 0.00 0.00 40.80 3.55
2096 2482 5.598830 AGTGGGTAGGAACATCTATGTAGTG 59.401 44.000 0.00 0.00 40.80 2.74
2097 2483 5.778542 AGTGGGTAGGAACATCTATGTAGT 58.221 41.667 0.00 0.00 40.80 2.73
2098 2484 7.093727 CCATAGTGGGTAGGAACATCTATGTAG 60.094 44.444 0.00 0.00 35.14 2.74
2099 2485 6.724441 CCATAGTGGGTAGGAACATCTATGTA 59.276 42.308 0.00 0.00 35.14 2.29
2100 2486 5.544176 CCATAGTGGGTAGGAACATCTATGT 59.456 44.000 0.00 0.00 36.83 2.29
2101 2487 5.780282 TCCATAGTGGGTAGGAACATCTATG 59.220 44.000 0.00 0.00 38.32 2.23
2102 2488 5.977533 TCCATAGTGGGTAGGAACATCTAT 58.022 41.667 0.00 0.00 38.32 1.98
2103 2489 5.394738 CTCCATAGTGGGTAGGAACATCTA 58.605 45.833 0.00 0.00 38.32 1.98
2104 2490 4.227197 CTCCATAGTGGGTAGGAACATCT 58.773 47.826 0.00 0.00 38.32 2.90
2105 2491 3.325135 CCTCCATAGTGGGTAGGAACATC 59.675 52.174 0.00 0.00 38.32 3.06
2106 2492 3.311402 ACCTCCATAGTGGGTAGGAACAT 60.311 47.826 9.90 0.00 38.32 2.71
2107 2493 2.045326 ACCTCCATAGTGGGTAGGAACA 59.955 50.000 9.90 0.00 38.32 3.18
2108 2494 2.760581 ACCTCCATAGTGGGTAGGAAC 58.239 52.381 9.90 0.00 38.32 3.62
2109 2495 4.194678 CTACCTCCATAGTGGGTAGGAA 57.805 50.000 9.90 0.00 45.09 3.36
2110 2496 3.897657 CTACCTCCATAGTGGGTAGGA 57.102 52.381 9.90 0.00 45.09 2.94
2113 2499 5.470755 TGTTACTACCTCCATAGTGGGTA 57.529 43.478 0.00 0.00 38.32 3.69
2114 2500 4.341863 TGTTACTACCTCCATAGTGGGT 57.658 45.455 0.00 0.00 38.32 4.51
2115 2501 6.075984 ACTATGTTACTACCTCCATAGTGGG 58.924 44.000 9.63 0.00 44.96 4.61
2116 2502 7.005296 AGACTATGTTACTACCTCCATAGTGG 58.995 42.308 14.01 0.00 46.02 4.00
2117 2503 9.221933 CTAGACTATGTTACTACCTCCATAGTG 57.778 40.741 14.01 0.00 46.02 2.74
2119 2505 7.830201 CCCTAGACTATGTTACTACCTCCATAG 59.170 44.444 0.00 0.00 41.50 2.23
2120 2506 7.518653 TCCCTAGACTATGTTACTACCTCCATA 59.481 40.741 0.00 0.00 0.00 2.74
2121 2507 6.334774 TCCCTAGACTATGTTACTACCTCCAT 59.665 42.308 0.00 0.00 0.00 3.41
2122 2508 5.673574 TCCCTAGACTATGTTACTACCTCCA 59.326 44.000 0.00 0.00 0.00 3.86
2123 2509 6.198237 TCCCTAGACTATGTTACTACCTCC 57.802 45.833 0.00 0.00 0.00 4.30
2124 2510 7.229106 CACTTCCCTAGACTATGTTACTACCTC 59.771 44.444 0.00 0.00 0.00 3.85
2125 2511 7.061688 CACTTCCCTAGACTATGTTACTACCT 58.938 42.308 0.00 0.00 0.00 3.08
2126 2512 6.832900 ACACTTCCCTAGACTATGTTACTACC 59.167 42.308 0.00 0.00 0.00 3.18
2127 2513 7.338957 ACACACTTCCCTAGACTATGTTACTAC 59.661 40.741 0.00 0.00 0.00 2.73
2128 2514 7.408543 ACACACTTCCCTAGACTATGTTACTA 58.591 38.462 0.00 0.00 0.00 1.82
2129 2515 6.254522 ACACACTTCCCTAGACTATGTTACT 58.745 40.000 0.00 0.00 0.00 2.24
2130 2516 6.527057 ACACACTTCCCTAGACTATGTTAC 57.473 41.667 0.00 0.00 0.00 2.50
2131 2517 7.892241 ACTTACACACTTCCCTAGACTATGTTA 59.108 37.037 0.00 0.00 0.00 2.41
2132 2518 6.724905 ACTTACACACTTCCCTAGACTATGTT 59.275 38.462 0.00 0.00 0.00 2.71
2133 2519 6.254522 ACTTACACACTTCCCTAGACTATGT 58.745 40.000 0.00 0.00 0.00 2.29
2134 2520 6.777213 ACTTACACACTTCCCTAGACTATG 57.223 41.667 0.00 0.00 0.00 2.23
2135 2521 8.114743 AGTAACTTACACACTTCCCTAGACTAT 58.885 37.037 1.79 0.00 0.00 2.12
2136 2522 7.465116 AGTAACTTACACACTTCCCTAGACTA 58.535 38.462 1.79 0.00 0.00 2.59
2137 2523 6.313324 AGTAACTTACACACTTCCCTAGACT 58.687 40.000 1.79 0.00 0.00 3.24
2138 2524 6.587206 AGTAACTTACACACTTCCCTAGAC 57.413 41.667 1.79 0.00 0.00 2.59
2139 2525 6.376581 GCTAGTAACTTACACACTTCCCTAGA 59.623 42.308 1.79 0.00 0.00 2.43
2140 2526 6.377712 AGCTAGTAACTTACACACTTCCCTAG 59.622 42.308 1.79 0.00 0.00 3.02
2141 2527 6.251471 AGCTAGTAACTTACACACTTCCCTA 58.749 40.000 1.79 0.00 0.00 3.53
2142 2528 5.085219 AGCTAGTAACTTACACACTTCCCT 58.915 41.667 1.79 0.00 0.00 4.20
2143 2529 5.402997 AGCTAGTAACTTACACACTTCCC 57.597 43.478 1.79 0.00 0.00 3.97
2144 2530 8.033626 ACATAAGCTAGTAACTTACACACTTCC 58.966 37.037 1.79 0.00 32.67 3.46
2145 2531 8.983307 ACATAAGCTAGTAACTTACACACTTC 57.017 34.615 1.79 0.00 32.67 3.01
2146 2532 9.420551 GAACATAAGCTAGTAACTTACACACTT 57.579 33.333 1.79 4.31 32.67 3.16
2147 2533 8.804204 AGAACATAAGCTAGTAACTTACACACT 58.196 33.333 1.79 0.00 32.67 3.55
2148 2534 8.983307 AGAACATAAGCTAGTAACTTACACAC 57.017 34.615 1.79 0.00 32.67 3.82
2149 2535 9.419297 CAAGAACATAAGCTAGTAACTTACACA 57.581 33.333 1.79 0.00 32.67 3.72
2150 2536 8.381387 GCAAGAACATAAGCTAGTAACTTACAC 58.619 37.037 1.79 0.00 32.67 2.90
2151 2537 8.311836 AGCAAGAACATAAGCTAGTAACTTACA 58.688 33.333 1.79 0.00 35.19 2.41
2152 2538 8.705048 AGCAAGAACATAAGCTAGTAACTTAC 57.295 34.615 0.00 0.00 35.19 2.34
2153 2539 8.528643 TGAGCAAGAACATAAGCTAGTAACTTA 58.471 33.333 0.00 0.00 37.48 2.24
2154 2540 7.386851 TGAGCAAGAACATAAGCTAGTAACTT 58.613 34.615 0.00 0.00 37.48 2.66
2155 2541 6.936279 TGAGCAAGAACATAAGCTAGTAACT 58.064 36.000 0.00 0.00 37.48 2.24
2156 2542 7.778470 ATGAGCAAGAACATAAGCTAGTAAC 57.222 36.000 0.00 0.00 37.48 2.50
2157 2543 7.824289 ACAATGAGCAAGAACATAAGCTAGTAA 59.176 33.333 0.00 0.00 37.48 2.24
2158 2544 7.278646 CACAATGAGCAAGAACATAAGCTAGTA 59.721 37.037 0.00 0.00 37.48 1.82
2159 2545 6.093219 CACAATGAGCAAGAACATAAGCTAGT 59.907 38.462 0.00 0.00 37.48 2.57
2160 2546 6.314648 TCACAATGAGCAAGAACATAAGCTAG 59.685 38.462 0.00 0.00 37.48 3.42
2161 2547 6.092670 GTCACAATGAGCAAGAACATAAGCTA 59.907 38.462 0.00 0.00 37.48 3.32
2162 2548 5.005740 TCACAATGAGCAAGAACATAAGCT 58.994 37.500 0.00 0.00 40.60 3.74
2163 2549 5.091431 GTCACAATGAGCAAGAACATAAGC 58.909 41.667 0.00 0.00 0.00 3.09
2164 2550 5.634896 GGTCACAATGAGCAAGAACATAAG 58.365 41.667 3.22 0.00 43.79 1.73
2165 2551 5.627499 GGTCACAATGAGCAAGAACATAA 57.373 39.130 3.22 0.00 43.79 1.90
2175 2561 2.012673 CTTAGGCTGGTCACAATGAGC 58.987 52.381 0.00 1.08 44.54 4.26
2176 2562 2.026822 ACCTTAGGCTGGTCACAATGAG 60.027 50.000 0.00 0.00 31.03 2.90
2177 2563 1.985159 ACCTTAGGCTGGTCACAATGA 59.015 47.619 0.00 0.00 31.03 2.57
2178 2564 2.496899 ACCTTAGGCTGGTCACAATG 57.503 50.000 0.00 0.00 31.03 2.82
2179 2565 3.525800 AAACCTTAGGCTGGTCACAAT 57.474 42.857 0.00 0.00 36.69 2.71
2180 2566 3.393278 AGTAAACCTTAGGCTGGTCACAA 59.607 43.478 0.00 0.00 36.69 3.33
2181 2567 2.976882 AGTAAACCTTAGGCTGGTCACA 59.023 45.455 0.00 0.00 36.69 3.58
2182 2568 3.697619 AGTAAACCTTAGGCTGGTCAC 57.302 47.619 0.00 0.00 36.69 3.67
2183 2569 4.141344 ACAAAGTAAACCTTAGGCTGGTCA 60.141 41.667 0.00 0.00 36.69 4.02
2184 2570 4.395625 ACAAAGTAAACCTTAGGCTGGTC 58.604 43.478 0.00 0.00 36.69 4.02
2185 2571 4.448720 ACAAAGTAAACCTTAGGCTGGT 57.551 40.909 0.00 0.00 39.91 4.00
2186 2572 7.175990 TGAAATACAAAGTAAACCTTAGGCTGG 59.824 37.037 0.00 0.00 31.48 4.85
2187 2573 8.106247 TGAAATACAAAGTAAACCTTAGGCTG 57.894 34.615 0.00 0.00 31.48 4.85
2188 2574 8.879427 ATGAAATACAAAGTAAACCTTAGGCT 57.121 30.769 0.00 0.00 31.48 4.58
2189 2575 9.923143 AAATGAAATACAAAGTAAACCTTAGGC 57.077 29.630 0.00 0.00 31.48 3.93
2233 2619 4.850859 TCATACAATTAAAGCGACCACG 57.149 40.909 0.00 0.00 42.93 4.94
2286 2672 3.732943 GTTGCAACGAGATAGAAAACCG 58.267 45.455 14.90 0.00 0.00 4.44
2307 2693 9.556030 GAATGGAGGAGTAAGAAATTAAAAACG 57.444 33.333 0.00 0.00 0.00 3.60
2315 2701 7.510675 TTAGTGGAATGGAGGAGTAAGAAAT 57.489 36.000 0.00 0.00 0.00 2.17
2323 2709 1.141858 GGGCTTAGTGGAATGGAGGAG 59.858 57.143 0.00 0.00 0.00 3.69
2324 2710 1.213296 GGGCTTAGTGGAATGGAGGA 58.787 55.000 0.00 0.00 0.00 3.71
2325 2711 0.179045 CGGGCTTAGTGGAATGGAGG 60.179 60.000 0.00 0.00 0.00 4.30
2326 2712 0.815615 GCGGGCTTAGTGGAATGGAG 60.816 60.000 0.00 0.00 0.00 3.86
2328 2714 2.180204 CGCGGGCTTAGTGGAATGG 61.180 63.158 0.00 0.00 0.00 3.16
2329 2715 2.823829 GCGCGGGCTTAGTGGAATG 61.824 63.158 18.33 0.00 35.83 2.67
2330 2716 2.513897 GCGCGGGCTTAGTGGAAT 60.514 61.111 18.33 0.00 35.83 3.01
2340 2726 3.610791 GACCTTGAAAAGCGCGGGC 62.611 63.158 17.92 17.92 44.44 6.13
2341 2727 0.672401 TAGACCTTGAAAAGCGCGGG 60.672 55.000 8.83 0.00 44.44 6.13
2342 2728 1.136057 GTTAGACCTTGAAAAGCGCGG 60.136 52.381 8.83 0.00 44.44 6.46
2343 2729 1.798813 AGTTAGACCTTGAAAAGCGCG 59.201 47.619 0.00 0.00 44.44 6.86
2344 2730 3.898517 AAGTTAGACCTTGAAAAGCGC 57.101 42.857 0.00 0.00 44.44 5.92
2345 2731 5.205565 GTCAAAGTTAGACCTTGAAAAGCG 58.794 41.667 0.00 0.00 44.44 4.68
2360 2746 8.798402 TCGTTGGATAAATTTATGGTCAAAGTT 58.202 29.630 15.39 0.00 31.36 2.66
2361 2747 8.343168 TCGTTGGATAAATTTATGGTCAAAGT 57.657 30.769 15.39 0.00 0.00 2.66
2362 2748 8.673711 TCTCGTTGGATAAATTTATGGTCAAAG 58.326 33.333 15.39 15.96 0.00 2.77
2363 2749 8.455682 GTCTCGTTGGATAAATTTATGGTCAAA 58.544 33.333 15.39 0.00 0.00 2.69
2364 2750 7.066525 GGTCTCGTTGGATAAATTTATGGTCAA 59.933 37.037 15.39 12.81 0.00 3.18
2365 2751 6.540914 GGTCTCGTTGGATAAATTTATGGTCA 59.459 38.462 15.39 8.08 0.00 4.02
2366 2752 6.292703 CGGTCTCGTTGGATAAATTTATGGTC 60.293 42.308 15.39 2.31 0.00 4.02
2367 2753 5.526111 CGGTCTCGTTGGATAAATTTATGGT 59.474 40.000 15.39 0.00 0.00 3.55
2368 2754 5.756347 TCGGTCTCGTTGGATAAATTTATGG 59.244 40.000 15.39 0.58 37.69 2.74
2369 2755 6.479001 AGTCGGTCTCGTTGGATAAATTTATG 59.521 38.462 15.39 1.20 37.69 1.90
2370 2756 6.479001 CAGTCGGTCTCGTTGGATAAATTTAT 59.521 38.462 10.51 10.51 37.69 1.40
2371 2757 5.808540 CAGTCGGTCTCGTTGGATAAATTTA 59.191 40.000 0.00 0.00 37.69 1.40
2372 2758 4.630069 CAGTCGGTCTCGTTGGATAAATTT 59.370 41.667 0.00 0.00 37.69 1.82
2373 2759 4.181578 CAGTCGGTCTCGTTGGATAAATT 58.818 43.478 0.00 0.00 37.69 1.82
2374 2760 3.782046 CAGTCGGTCTCGTTGGATAAAT 58.218 45.455 0.00 0.00 37.69 1.40
2375 2761 2.673043 GCAGTCGGTCTCGTTGGATAAA 60.673 50.000 0.00 0.00 37.69 1.40
2376 2762 1.135199 GCAGTCGGTCTCGTTGGATAA 60.135 52.381 0.00 0.00 37.69 1.75
2377 2763 0.454600 GCAGTCGGTCTCGTTGGATA 59.545 55.000 0.00 0.00 37.69 2.59
2378 2764 1.215647 GCAGTCGGTCTCGTTGGAT 59.784 57.895 0.00 0.00 37.69 3.41
2379 2765 2.649034 GCAGTCGGTCTCGTTGGA 59.351 61.111 0.00 0.00 37.69 3.53
2380 2766 2.805353 CGCAGTCGGTCTCGTTGG 60.805 66.667 0.00 0.00 37.69 3.77
2390 2776 0.941542 TTTTTCTTCCACCGCAGTCG 59.058 50.000 0.00 0.00 0.00 4.18
2439 2825 9.846248 GAGCAAAAGTTATATCAGTGAATTTGT 57.154 29.630 0.00 0.00 0.00 2.83
2440 2826 9.294030 GGAGCAAAAGTTATATCAGTGAATTTG 57.706 33.333 0.00 2.51 0.00 2.32
2441 2827 8.470002 GGGAGCAAAAGTTATATCAGTGAATTT 58.530 33.333 0.00 0.00 0.00 1.82
2442 2828 7.615365 TGGGAGCAAAAGTTATATCAGTGAATT 59.385 33.333 0.00 0.00 0.00 2.17
2443 2829 7.067494 GTGGGAGCAAAAGTTATATCAGTGAAT 59.933 37.037 0.00 0.00 0.00 2.57
2444 2830 6.374333 GTGGGAGCAAAAGTTATATCAGTGAA 59.626 38.462 0.00 0.00 0.00 3.18
2445 2831 5.880332 GTGGGAGCAAAAGTTATATCAGTGA 59.120 40.000 0.00 0.00 0.00 3.41
2446 2832 5.066505 GGTGGGAGCAAAAGTTATATCAGTG 59.933 44.000 0.00 0.00 0.00 3.66
2447 2833 5.193679 GGTGGGAGCAAAAGTTATATCAGT 58.806 41.667 0.00 0.00 0.00 3.41
2448 2834 4.273480 CGGTGGGAGCAAAAGTTATATCAG 59.727 45.833 0.00 0.00 0.00 2.90
2449 2835 4.196193 CGGTGGGAGCAAAAGTTATATCA 58.804 43.478 0.00 0.00 0.00 2.15
2450 2836 4.196971 ACGGTGGGAGCAAAAGTTATATC 58.803 43.478 0.00 0.00 0.00 1.63
2451 2837 4.230745 ACGGTGGGAGCAAAAGTTATAT 57.769 40.909 0.00 0.00 0.00 0.86
2452 2838 3.706600 ACGGTGGGAGCAAAAGTTATA 57.293 42.857 0.00 0.00 0.00 0.98
2453 2839 2.579410 ACGGTGGGAGCAAAAGTTAT 57.421 45.000 0.00 0.00 0.00 1.89
2454 2840 2.369532 ACTACGGTGGGAGCAAAAGTTA 59.630 45.455 0.00 0.00 0.00 2.24
2455 2841 1.142262 ACTACGGTGGGAGCAAAAGTT 59.858 47.619 0.00 0.00 0.00 2.66
2456 2842 0.763035 ACTACGGTGGGAGCAAAAGT 59.237 50.000 0.00 0.00 0.00 2.66
2457 2843 1.439679 GACTACGGTGGGAGCAAAAG 58.560 55.000 0.00 0.00 0.00 2.27
2458 2844 0.320073 CGACTACGGTGGGAGCAAAA 60.320 55.000 0.00 0.00 35.72 2.44
2459 2845 1.290955 CGACTACGGTGGGAGCAAA 59.709 57.895 0.00 0.00 35.72 3.68
2460 2846 2.967397 CGACTACGGTGGGAGCAA 59.033 61.111 0.00 0.00 35.72 3.91
2470 2856 2.144482 AACCAACAAGACCGACTACG 57.856 50.000 0.00 0.00 39.43 3.51
2471 2857 6.549912 AATTTAACCAACAAGACCGACTAC 57.450 37.500 0.00 0.00 0.00 2.73
2472 2858 8.723311 CATAAATTTAACCAACAAGACCGACTA 58.277 33.333 1.21 0.00 0.00 2.59
2473 2859 7.446013 TCATAAATTTAACCAACAAGACCGACT 59.554 33.333 1.21 0.00 0.00 4.18
2474 2860 7.586747 TCATAAATTTAACCAACAAGACCGAC 58.413 34.615 1.21 0.00 0.00 4.79
2475 2861 7.747155 TCATAAATTTAACCAACAAGACCGA 57.253 32.000 1.21 0.00 0.00 4.69
2476 2862 8.240682 TGATCATAAATTTAACCAACAAGACCG 58.759 33.333 1.21 0.00 0.00 4.79
2477 2863 9.921637 TTGATCATAAATTTAACCAACAAGACC 57.078 29.630 1.21 0.00 0.00 3.85
2492 2878 9.699410 TCCCATAGTTCAACTTTGATCATAAAT 57.301 29.630 9.39 0.00 37.00 1.40
2493 2879 9.527157 TTCCCATAGTTCAACTTTGATCATAAA 57.473 29.630 9.39 0.00 37.00 1.40
2494 2880 9.177608 CTTCCCATAGTTCAACTTTGATCATAA 57.822 33.333 9.39 0.00 37.00 1.90
2495 2881 8.548025 TCTTCCCATAGTTCAACTTTGATCATA 58.452 33.333 9.39 0.00 37.00 2.15
2496 2882 7.405292 TCTTCCCATAGTTCAACTTTGATCAT 58.595 34.615 9.39 0.00 37.00 2.45
2497 2883 6.778821 TCTTCCCATAGTTCAACTTTGATCA 58.221 36.000 9.39 0.00 37.00 2.92
2498 2884 7.687941 TTCTTCCCATAGTTCAACTTTGATC 57.312 36.000 9.39 0.00 37.00 2.92
2499 2885 7.309438 GCTTTCTTCCCATAGTTCAACTTTGAT 60.309 37.037 9.39 0.00 37.00 2.57
2500 2886 6.016276 GCTTTCTTCCCATAGTTCAACTTTGA 60.016 38.462 9.39 0.00 30.18 2.69
2501 2887 6.152379 GCTTTCTTCCCATAGTTCAACTTTG 58.848 40.000 0.00 0.00 0.00 2.77
2502 2888 5.833131 TGCTTTCTTCCCATAGTTCAACTTT 59.167 36.000 0.00 0.00 0.00 2.66
2503 2889 5.241728 GTGCTTTCTTCCCATAGTTCAACTT 59.758 40.000 0.00 0.00 0.00 2.66
2504 2890 4.762251 GTGCTTTCTTCCCATAGTTCAACT 59.238 41.667 0.00 0.00 0.00 3.16
2505 2891 4.762251 AGTGCTTTCTTCCCATAGTTCAAC 59.238 41.667 0.00 0.00 0.00 3.18
2506 2892 4.985538 AGTGCTTTCTTCCCATAGTTCAA 58.014 39.130 0.00 0.00 0.00 2.69
2507 2893 4.640771 AGTGCTTTCTTCCCATAGTTCA 57.359 40.909 0.00 0.00 0.00 3.18
2508 2894 5.488341 TGTAGTGCTTTCTTCCCATAGTTC 58.512 41.667 0.00 0.00 0.00 3.01
2509 2895 5.499004 TGTAGTGCTTTCTTCCCATAGTT 57.501 39.130 0.00 0.00 0.00 2.24
2510 2896 5.700402 ATGTAGTGCTTTCTTCCCATAGT 57.300 39.130 0.00 0.00 0.00 2.12
2511 2897 7.933577 TCATAATGTAGTGCTTTCTTCCCATAG 59.066 37.037 0.00 0.00 0.00 2.23
2512 2898 7.801104 TCATAATGTAGTGCTTTCTTCCCATA 58.199 34.615 0.00 0.00 0.00 2.74
2513 2899 6.662755 TCATAATGTAGTGCTTTCTTCCCAT 58.337 36.000 0.00 0.00 0.00 4.00
2514 2900 6.061022 TCATAATGTAGTGCTTTCTTCCCA 57.939 37.500 0.00 0.00 0.00 4.37
2515 2901 7.251281 GTTTCATAATGTAGTGCTTTCTTCCC 58.749 38.462 0.00 0.00 0.00 3.97
2516 2902 6.961554 CGTTTCATAATGTAGTGCTTTCTTCC 59.038 38.462 0.00 0.00 0.00 3.46
2517 2903 7.739295 TCGTTTCATAATGTAGTGCTTTCTTC 58.261 34.615 0.00 0.00 0.00 2.87
2518 2904 7.667043 TCGTTTCATAATGTAGTGCTTTCTT 57.333 32.000 0.00 0.00 0.00 2.52
2519 2905 7.148407 CCTTCGTTTCATAATGTAGTGCTTTCT 60.148 37.037 0.00 0.00 0.00 2.52
2520 2906 6.961554 CCTTCGTTTCATAATGTAGTGCTTTC 59.038 38.462 0.00 0.00 0.00 2.62
2521 2907 6.128007 CCCTTCGTTTCATAATGTAGTGCTTT 60.128 38.462 0.00 0.00 0.00 3.51
2522 2908 5.354234 CCCTTCGTTTCATAATGTAGTGCTT 59.646 40.000 0.00 0.00 0.00 3.91
2523 2909 4.876107 CCCTTCGTTTCATAATGTAGTGCT 59.124 41.667 0.00 0.00 0.00 4.40
2524 2910 4.873827 TCCCTTCGTTTCATAATGTAGTGC 59.126 41.667 0.00 0.00 0.00 4.40
2525 2911 6.106673 ACTCCCTTCGTTTCATAATGTAGTG 58.893 40.000 0.00 0.00 0.00 2.74
2526 2912 6.295719 ACTCCCTTCGTTTCATAATGTAGT 57.704 37.500 0.00 0.00 0.00 2.73
2534 2920 9.364653 AGTAGTTATATACTCCCTTCGTTTCAT 57.635 33.333 0.00 0.00 38.33 2.57
2535 2921 8.757982 AGTAGTTATATACTCCCTTCGTTTCA 57.242 34.615 0.00 0.00 38.33 2.69
2536 2922 9.676195 GAAGTAGTTATATACTCCCTTCGTTTC 57.324 37.037 0.00 0.00 36.28 2.78
2537 2923 9.418839 AGAAGTAGTTATATACTCCCTTCGTTT 57.581 33.333 0.00 0.00 43.23 3.60
2538 2924 8.993404 AGAAGTAGTTATATACTCCCTTCGTT 57.007 34.615 0.00 0.00 43.23 3.85
2539 2925 9.723601 CTAGAAGTAGTTATATACTCCCTTCGT 57.276 37.037 0.00 0.00 43.23 3.85
2540 2926 8.667463 GCTAGAAGTAGTTATATACTCCCTTCG 58.333 40.741 0.00 0.00 43.23 3.79
2541 2927 9.517868 TGCTAGAAGTAGTTATATACTCCCTTC 57.482 37.037 0.00 0.00 41.14 3.46
2543 2929 9.469097 CATGCTAGAAGTAGTTATATACTCCCT 57.531 37.037 0.00 0.00 38.33 4.20
2544 2930 9.463902 TCATGCTAGAAGTAGTTATATACTCCC 57.536 37.037 0.00 0.00 38.33 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.