Multiple sequence alignment - TraesCS3B01G310900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G310900 chr3B 100.000 5848 0 0 1 5848 499449466 499455313 0.000000e+00 10800.0
1 TraesCS3B01G310900 chr3B 80.023 861 131 29 1373 2220 499628394 499629226 3.020000e-167 599.0
2 TraesCS3B01G310900 chr3B 87.427 517 55 8 2709 3219 356863244 356862732 2.350000e-163 586.0
3 TraesCS3B01G310900 chr3B 86.240 516 61 8 2709 3219 754377636 754378146 8.560000e-153 551.0
4 TraesCS3B01G310900 chr3B 77.437 913 162 23 1327 2231 498065489 498064613 6.760000e-139 505.0
5 TraesCS3B01G310900 chr3B 90.549 328 27 4 3214 3541 754378200 754378523 1.160000e-116 431.0
6 TraesCS3B01G310900 chr3B 83.630 281 25 12 3900 4173 356862102 356861836 1.630000e-60 244.0
7 TraesCS3B01G310900 chr3D 94.602 2427 88 21 817 3218 384247229 384249637 0.000000e+00 3716.0
8 TraesCS3B01G310900 chr3D 95.180 2282 85 13 3214 5484 384249683 384251950 0.000000e+00 3581.0
9 TraesCS3B01G310900 chr3D 79.490 863 132 32 1373 2220 384442130 384442962 6.570000e-159 571.0
10 TraesCS3B01G310900 chr3D 76.991 904 164 27 1327 2223 382118006 382117140 1.470000e-130 477.0
11 TraesCS3B01G310900 chr3D 76.788 909 173 21 1327 2231 382505410 382504536 5.300000e-130 475.0
12 TraesCS3B01G310900 chr3D 80.122 493 85 8 7 492 3166521 3167007 7.210000e-94 355.0
13 TraesCS3B01G310900 chr3D 91.016 256 18 3 5523 5778 384267675 384267925 2.020000e-89 340.0
14 TraesCS3B01G310900 chr3D 98.592 71 1 0 5778 5848 384267958 384268028 6.150000e-25 126.0
15 TraesCS3B01G310900 chr3A 93.633 2513 108 23 711 3199 506799769 506802253 0.000000e+00 3707.0
16 TraesCS3B01G310900 chr3A 94.845 1358 50 9 3214 4569 506802317 506803656 0.000000e+00 2102.0
17 TraesCS3B01G310900 chr3A 92.122 952 52 8 4644 5586 506803781 506804718 0.000000e+00 1321.0
18 TraesCS3B01G310900 chr3A 84.774 972 105 23 3214 4173 83692239 83693179 0.000000e+00 935.0
19 TraesCS3B01G310900 chr3A 79.722 863 130 31 1373 2220 506915536 506916368 3.040000e-162 582.0
20 TraesCS3B01G310900 chr3A 81.586 744 99 14 1 713 506778538 506779274 1.090000e-161 580.0
21 TraesCS3B01G310900 chr3A 87.016 516 59 7 2709 3219 83691673 83692185 5.080000e-160 575.0
22 TraesCS3B01G310900 chr3A 76.855 903 167 23 1327 2223 505238508 505237642 6.860000e-129 472.0
23 TraesCS3B01G310900 chr3A 91.729 133 11 0 5646 5778 506806021 506806153 1.000000e-42 185.0
24 TraesCS3B01G310900 chr3A 86.503 163 19 1 4644 4803 83693409 83693571 6.020000e-40 176.0
25 TraesCS3B01G310900 chr3A 98.630 73 1 0 5776 5848 506806184 506806256 4.760000e-26 130.0
26 TraesCS3B01G310900 chr3A 96.364 55 1 1 4573 4627 506803735 506803788 8.070000e-14 89.8
27 TraesCS3B01G310900 chr7A 88.201 517 52 7 2709 3219 13466087 13465574 5.010000e-170 608.0
28 TraesCS3B01G310900 chr7A 83.986 587 82 6 7 587 232755020 232755600 2.380000e-153 553.0
29 TraesCS3B01G310900 chr4A 87.427 517 54 8 2709 3219 511083370 511082859 8.440000e-163 584.0
30 TraesCS3B01G310900 chr4A 83.929 280 25 11 3900 4173 511082236 511081971 3.500000e-62 250.0
31 TraesCS3B01G310900 chr4A 88.485 165 16 1 4645 4806 511081736 511081572 4.620000e-46 196.0
32 TraesCS3B01G310900 chr4A 92.391 92 2 1 3214 3305 511082805 511082719 6.150000e-25 126.0
33 TraesCS3B01G310900 chr6D 81.436 571 89 10 7 568 333001132 333001694 8.940000e-123 451.0
34 TraesCS3B01G310900 chr5A 83.368 487 69 7 7 492 667892606 667893081 1.930000e-119 440.0
35 TraesCS3B01G310900 chr5A 88.660 97 9 2 3405 3500 219312150 219312245 3.700000e-22 117.0
36 TraesCS3B01G310900 chr2A 84.106 453 68 3 1 453 222652940 222653388 9.000000e-118 435.0
37 TraesCS3B01G310900 chr1B 82.556 493 69 11 1 493 520405870 520405395 9.060000e-113 418.0
38 TraesCS3B01G310900 chr5D 81.710 421 70 5 76 493 433006687 433006271 1.560000e-90 344.0
39 TraesCS3B01G310900 chr7D 79.226 491 85 8 7 496 230944305 230943831 5.650000e-85 326.0
40 TraesCS3B01G310900 chr7D 77.414 611 90 25 33 602 265162561 265163164 2.630000e-83 320.0
41 TraesCS3B01G310900 chr7D 78.689 122 20 6 462 581 34999368 34999485 6.280000e-10 76.8
42 TraesCS3B01G310900 chr1D 82.911 158 25 1 3651 3808 491724532 491724377 2.200000e-29 141.0
43 TraesCS3B01G310900 chr6A 78.421 190 33 6 469 651 14362749 14362937 3.700000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G310900 chr3B 499449466 499455313 5847 False 10800.0 10800 100.000000 1 5848 1 chr3B.!!$F1 5847
1 TraesCS3B01G310900 chr3B 499628394 499629226 832 False 599.0 599 80.023000 1373 2220 1 chr3B.!!$F2 847
2 TraesCS3B01G310900 chr3B 498064613 498065489 876 True 505.0 505 77.437000 1327 2231 1 chr3B.!!$R1 904
3 TraesCS3B01G310900 chr3B 754377636 754378523 887 False 491.0 551 88.394500 2709 3541 2 chr3B.!!$F3 832
4 TraesCS3B01G310900 chr3B 356861836 356863244 1408 True 415.0 586 85.528500 2709 4173 2 chr3B.!!$R2 1464
5 TraesCS3B01G310900 chr3D 384247229 384251950 4721 False 3648.5 3716 94.891000 817 5484 2 chr3D.!!$F3 4667
6 TraesCS3B01G310900 chr3D 384442130 384442962 832 False 571.0 571 79.490000 1373 2220 1 chr3D.!!$F2 847
7 TraesCS3B01G310900 chr3D 382117140 382118006 866 True 477.0 477 76.991000 1327 2223 1 chr3D.!!$R1 896
8 TraesCS3B01G310900 chr3D 382504536 382505410 874 True 475.0 475 76.788000 1327 2231 1 chr3D.!!$R2 904
9 TraesCS3B01G310900 chr3A 506799769 506806256 6487 False 1255.8 3707 94.553833 711 5848 6 chr3A.!!$F4 5137
10 TraesCS3B01G310900 chr3A 506915536 506916368 832 False 582.0 582 79.722000 1373 2220 1 chr3A.!!$F2 847
11 TraesCS3B01G310900 chr3A 506778538 506779274 736 False 580.0 580 81.586000 1 713 1 chr3A.!!$F1 712
12 TraesCS3B01G310900 chr3A 83691673 83693571 1898 False 562.0 935 86.097667 2709 4803 3 chr3A.!!$F3 2094
13 TraesCS3B01G310900 chr3A 505237642 505238508 866 True 472.0 472 76.855000 1327 2223 1 chr3A.!!$R1 896
14 TraesCS3B01G310900 chr7A 13465574 13466087 513 True 608.0 608 88.201000 2709 3219 1 chr7A.!!$R1 510
15 TraesCS3B01G310900 chr7A 232755020 232755600 580 False 553.0 553 83.986000 7 587 1 chr7A.!!$F1 580
16 TraesCS3B01G310900 chr4A 511081572 511083370 1798 True 289.0 584 88.058000 2709 4806 4 chr4A.!!$R1 2097
17 TraesCS3B01G310900 chr6D 333001132 333001694 562 False 451.0 451 81.436000 7 568 1 chr6D.!!$F1 561
18 TraesCS3B01G310900 chr7D 265162561 265163164 603 False 320.0 320 77.414000 33 602 1 chr7D.!!$F2 569

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
348 349 0.030101 CGGAGCTAGAGAAGGCGAAG 59.970 60.000 0.00 0.0 0.00 3.79 F
613 614 0.035820 TGGTCCCCACGAACTAATGC 60.036 55.000 0.00 0.0 0.00 3.56 F
616 617 0.251916 TCCCCACGAACTAATGCAGG 59.748 55.000 0.00 0.0 0.00 4.85 F
617 618 0.251916 CCCCACGAACTAATGCAGGA 59.748 55.000 0.00 0.0 0.00 3.86 F
650 651 0.407528 TTGCTGTTGGGATGCCCTTA 59.592 50.000 0.00 0.0 45.70 2.69 F
651 652 0.407528 TGCTGTTGGGATGCCCTTAA 59.592 50.000 0.00 0.0 45.70 1.85 F
687 688 0.550914 TGTTGGGAGTGGCTGAAGTT 59.449 50.000 0.00 0.0 0.00 2.66 F
1040 1049 0.598680 GATTCATACCGCTGCTCGCT 60.599 55.000 0.00 0.0 36.73 4.93 F
1752 1786 1.006878 AGGAAGGACTACGCCTACCTT 59.993 52.381 0.00 0.0 44.08 3.50 F
2052 2143 1.875813 CGAGCGTCTGAGCATGGAC 60.876 63.158 0.00 0.0 40.15 4.02 F
4623 4944 2.069273 GAAACTGACCACGGTGATGAG 58.931 52.381 10.28 0.0 35.61 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2322 2461 0.251341 GGTGTCATTTCCCTGCAGGT 60.251 55.000 30.63 10.11 36.75 4.00 R
2323 2462 0.967380 GGGTGTCATTTCCCTGCAGG 60.967 60.000 26.87 26.87 40.48 4.85 R
2548 2688 3.823873 AGAATCTAGGTCTAGCCATCACG 59.176 47.826 6.07 0.00 40.61 4.35 R
2550 2690 6.794534 TCATAGAATCTAGGTCTAGCCATCA 58.205 40.000 1.72 0.00 40.61 3.07 R
2631 2771 9.762933 ACACAGAAGCAAATTTAACATTGTTAT 57.237 25.926 9.95 0.00 0.00 1.89 R
2878 3023 3.056328 GTTCGCCTTGGCCTCCAC 61.056 66.667 3.32 0.00 30.78 4.02 R
3446 3651 1.679139 CAAAGTCTGTTCCAGCACCA 58.321 50.000 0.00 0.00 0.00 4.17 R
3784 3996 8.099364 TGAATTTGAAAAGATAGCTCTCGTTT 57.901 30.769 11.74 11.74 30.97 3.60 R
4321 4566 1.268079 GGTGAAAGCTGCTTTCCAGTC 59.732 52.381 37.92 27.47 46.36 3.51 R
4739 5066 0.597637 CCGACGTGTTGAGCTTCTGT 60.598 55.000 0.00 0.00 0.00 3.41 R
5746 7359 0.109689 GTCAGTTCCTGGTCGTCTCG 60.110 60.000 0.00 0.00 31.51 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 2.387445 CGGGCAAAGCGATGTTCGA 61.387 57.895 0.32 0.00 43.74 3.71
80 81 0.037877 AGACCGACGAGAAGGAGGAA 59.962 55.000 0.00 0.00 0.00 3.36
97 98 3.665675 AAGACATCGCCGAGGCCAC 62.666 63.158 5.01 0.00 37.98 5.01
123 124 2.401766 GGCCACGACCATGAAGCTG 61.402 63.158 0.00 0.00 0.00 4.24
131 132 2.401766 CCATGAAGCTGGCACGTCC 61.402 63.158 0.00 0.00 0.00 4.79
166 167 0.528470 AGCGAGGAAGAGTAGTGCAC 59.472 55.000 9.40 9.40 0.00 4.57
172 173 1.817447 GGAAGAGTAGTGCACGGTAGT 59.183 52.381 12.01 1.85 0.00 2.73
175 176 1.467734 AGAGTAGTGCACGGTAGTTCG 59.532 52.381 12.01 0.00 0.00 3.95
204 205 4.410400 GTCCCAGGAAGGCCACCG 62.410 72.222 5.01 4.82 36.29 4.94
247 248 0.610232 AGCTTGGTGGGCTCAACATC 60.610 55.000 4.39 0.00 40.73 3.06
249 250 0.321564 CTTGGTGGGCTCAACATCGA 60.322 55.000 4.39 0.00 40.73 3.59
268 269 2.513897 GGCCGATTAGCCGCTTGT 60.514 61.111 0.00 0.00 44.57 3.16
281 282 0.453282 CGCTTGTCGGCAACATGAAG 60.453 55.000 0.00 0.00 37.82 3.02
284 285 0.950836 TTGTCGGCAACATGAAGGTG 59.049 50.000 0.00 0.00 37.82 4.00
285 286 0.107643 TGTCGGCAACATGAAGGTGA 59.892 50.000 0.00 0.00 36.95 4.02
287 288 1.069227 GTCGGCAACATGAAGGTGAAC 60.069 52.381 0.00 0.00 36.95 3.18
289 290 1.336440 CGGCAACATGAAGGTGAACAA 59.664 47.619 0.00 0.00 36.95 2.83
304 305 2.241176 TGAACAACTTCACTTCCCAGGT 59.759 45.455 0.00 0.00 31.00 4.00
346 347 3.829048 CGGAGCTAGAGAAGGCGA 58.171 61.111 0.00 0.00 0.00 5.54
347 348 2.107705 CGGAGCTAGAGAAGGCGAA 58.892 57.895 0.00 0.00 0.00 4.70
348 349 0.030101 CGGAGCTAGAGAAGGCGAAG 59.970 60.000 0.00 0.00 0.00 3.79
363 364 1.623359 CGAAGCTTCAGTTCTCGAGG 58.377 55.000 25.47 1.94 0.00 4.63
364 365 1.355005 GAAGCTTCAGTTCTCGAGGC 58.645 55.000 21.67 6.01 35.83 4.70
365 366 0.972883 AAGCTTCAGTTCTCGAGGCT 59.027 50.000 13.56 8.45 46.62 4.58
366 367 0.530288 AGCTTCAGTTCTCGAGGCTC 59.470 55.000 13.56 3.87 41.51 4.70
367 368 0.800300 GCTTCAGTTCTCGAGGCTCG 60.800 60.000 30.10 30.10 42.10 5.03
368 369 0.523966 CTTCAGTTCTCGAGGCTCGT 59.476 55.000 33.31 13.84 41.35 4.18
369 370 0.241213 TTCAGTTCTCGAGGCTCGTG 59.759 55.000 33.31 30.42 41.35 4.35
370 371 1.153939 CAGTTCTCGAGGCTCGTGG 60.154 63.158 33.31 25.87 41.35 4.94
371 372 2.507324 GTTCTCGAGGCTCGTGGC 60.507 66.667 33.31 22.62 41.35 5.01
381 382 4.838152 CTCGTGGCCGGACATGGG 62.838 72.222 29.28 23.77 33.95 4.00
384 385 4.041762 GTGGCCGGACATGGGGAA 62.042 66.667 16.47 0.00 0.00 3.97
385 386 4.041762 TGGCCGGACATGGGGAAC 62.042 66.667 5.41 0.00 0.00 3.62
388 389 4.483243 CCGGACATGGGGAACGGG 62.483 72.222 0.00 0.00 40.79 5.28
389 390 3.712907 CGGACATGGGGAACGGGT 61.713 66.667 0.00 0.00 0.00 5.28
390 391 2.045340 GGACATGGGGAACGGGTG 60.045 66.667 0.00 0.00 0.00 4.61
391 392 2.750237 GACATGGGGAACGGGTGC 60.750 66.667 0.00 0.00 0.00 5.01
392 393 4.360405 ACATGGGGAACGGGTGCC 62.360 66.667 0.00 0.00 36.87 5.01
404 405 2.437002 GGTGCCGGCGACCATTTA 60.437 61.111 31.01 8.77 33.25 1.40
405 406 2.469516 GGTGCCGGCGACCATTTAG 61.470 63.158 31.01 0.00 33.25 1.85
406 407 1.448893 GTGCCGGCGACCATTTAGA 60.449 57.895 23.90 0.00 0.00 2.10
407 408 0.814010 GTGCCGGCGACCATTTAGAT 60.814 55.000 23.90 0.00 0.00 1.98
408 409 0.107410 TGCCGGCGACCATTTAGATT 60.107 50.000 23.90 0.00 0.00 2.40
409 410 1.139256 TGCCGGCGACCATTTAGATTA 59.861 47.619 23.90 0.00 0.00 1.75
410 411 1.798813 GCCGGCGACCATTTAGATTAG 59.201 52.381 12.58 0.00 0.00 1.73
411 412 2.413837 CCGGCGACCATTTAGATTAGG 58.586 52.381 9.30 0.00 0.00 2.69
412 413 2.224209 CCGGCGACCATTTAGATTAGGT 60.224 50.000 9.30 0.00 37.00 3.08
413 414 3.006110 CCGGCGACCATTTAGATTAGGTA 59.994 47.826 9.30 0.00 33.77 3.08
414 415 4.322499 CCGGCGACCATTTAGATTAGGTAT 60.322 45.833 9.30 0.00 33.77 2.73
415 416 5.235516 CGGCGACCATTTAGATTAGGTATT 58.764 41.667 0.00 0.00 33.77 1.89
416 417 6.392354 CGGCGACCATTTAGATTAGGTATTA 58.608 40.000 0.00 0.00 33.77 0.98
417 418 6.869913 CGGCGACCATTTAGATTAGGTATTAA 59.130 38.462 0.00 0.00 33.77 1.40
418 419 7.148689 CGGCGACCATTTAGATTAGGTATTAAC 60.149 40.741 0.00 0.00 33.77 2.01
419 420 7.876582 GGCGACCATTTAGATTAGGTATTAACT 59.123 37.037 0.00 0.00 33.77 2.24
420 421 9.918630 GCGACCATTTAGATTAGGTATTAACTA 57.081 33.333 0.00 0.00 33.77 2.24
436 437 8.179509 GTATTAACTATACCTTCAGAGCCAGA 57.820 38.462 0.00 0.00 34.25 3.86
437 438 6.466885 TTAACTATACCTTCAGAGCCAGAC 57.533 41.667 0.00 0.00 0.00 3.51
438 439 4.258457 ACTATACCTTCAGAGCCAGACT 57.742 45.455 0.00 0.00 0.00 3.24
439 440 5.390087 ACTATACCTTCAGAGCCAGACTA 57.610 43.478 0.00 0.00 0.00 2.59
440 441 5.381757 ACTATACCTTCAGAGCCAGACTAG 58.618 45.833 0.00 0.00 0.00 2.57
441 442 1.190643 ACCTTCAGAGCCAGACTAGC 58.809 55.000 0.00 0.00 0.00 3.42
442 443 1.189752 CCTTCAGAGCCAGACTAGCA 58.810 55.000 0.00 0.00 0.00 3.49
443 444 1.134848 CCTTCAGAGCCAGACTAGCAC 60.135 57.143 0.00 0.00 0.00 4.40
444 445 0.898320 TTCAGAGCCAGACTAGCACC 59.102 55.000 0.00 0.00 0.00 5.01
445 446 0.251787 TCAGAGCCAGACTAGCACCA 60.252 55.000 0.00 0.00 0.00 4.17
446 447 0.108424 CAGAGCCAGACTAGCACCAC 60.108 60.000 0.00 0.00 0.00 4.16
447 448 0.252012 AGAGCCAGACTAGCACCACT 60.252 55.000 0.00 0.00 0.00 4.00
448 449 0.610687 GAGCCAGACTAGCACCACTT 59.389 55.000 0.00 0.00 0.00 3.16
449 450 1.825474 GAGCCAGACTAGCACCACTTA 59.175 52.381 0.00 0.00 0.00 2.24
450 451 1.827969 AGCCAGACTAGCACCACTTAG 59.172 52.381 0.00 0.00 0.00 2.18
451 452 1.550976 GCCAGACTAGCACCACTTAGT 59.449 52.381 0.00 0.00 0.00 2.24
452 453 2.028020 GCCAGACTAGCACCACTTAGTT 60.028 50.000 0.00 0.00 0.00 2.24
453 454 3.589988 CCAGACTAGCACCACTTAGTTG 58.410 50.000 0.00 0.00 0.00 3.16
454 455 3.258372 CCAGACTAGCACCACTTAGTTGA 59.742 47.826 0.00 0.00 0.00 3.18
455 456 4.081420 CCAGACTAGCACCACTTAGTTGAT 60.081 45.833 0.00 0.00 0.00 2.57
456 457 4.867047 CAGACTAGCACCACTTAGTTGATG 59.133 45.833 0.00 0.00 0.00 3.07
457 458 4.528596 AGACTAGCACCACTTAGTTGATGT 59.471 41.667 0.00 0.00 0.00 3.06
458 459 5.715279 AGACTAGCACCACTTAGTTGATGTA 59.285 40.000 0.00 0.00 0.00 2.29
459 460 6.210784 AGACTAGCACCACTTAGTTGATGTAA 59.789 38.462 0.00 0.00 0.00 2.41
460 461 6.765403 ACTAGCACCACTTAGTTGATGTAAA 58.235 36.000 0.00 0.00 0.00 2.01
461 462 7.394816 ACTAGCACCACTTAGTTGATGTAAAT 58.605 34.615 0.00 0.00 0.00 1.40
462 463 6.500684 AGCACCACTTAGTTGATGTAAATG 57.499 37.500 0.00 0.00 0.00 2.32
463 464 6.003950 AGCACCACTTAGTTGATGTAAATGT 58.996 36.000 0.00 0.00 0.00 2.71
464 465 7.165485 AGCACCACTTAGTTGATGTAAATGTA 58.835 34.615 0.00 0.00 0.00 2.29
465 466 7.663905 AGCACCACTTAGTTGATGTAAATGTAA 59.336 33.333 0.00 0.00 0.00 2.41
466 467 8.458843 GCACCACTTAGTTGATGTAAATGTAAT 58.541 33.333 0.00 0.00 0.00 1.89
467 468 9.773328 CACCACTTAGTTGATGTAAATGTAATG 57.227 33.333 0.00 0.00 0.00 1.90
468 469 9.733556 ACCACTTAGTTGATGTAAATGTAATGA 57.266 29.630 0.00 0.00 0.00 2.57
495 496 9.559732 AATCTGTCATGTTTATATGAAATCCGA 57.440 29.630 0.00 0.00 38.69 4.55
496 497 8.365399 TCTGTCATGTTTATATGAAATCCGAC 57.635 34.615 0.00 0.00 38.69 4.79
497 498 7.441157 TCTGTCATGTTTATATGAAATCCGACC 59.559 37.037 0.00 0.00 38.69 4.79
498 499 6.201997 TGTCATGTTTATATGAAATCCGACCG 59.798 38.462 0.00 0.00 38.69 4.79
499 500 6.202188 GTCATGTTTATATGAAATCCGACCGT 59.798 38.462 0.00 0.00 38.69 4.83
500 501 5.977171 TGTTTATATGAAATCCGACCGTG 57.023 39.130 0.00 0.00 0.00 4.94
501 502 5.421277 TGTTTATATGAAATCCGACCGTGT 58.579 37.500 0.00 0.00 0.00 4.49
502 503 5.875910 TGTTTATATGAAATCCGACCGTGTT 59.124 36.000 0.00 0.00 0.00 3.32
503 504 6.372103 TGTTTATATGAAATCCGACCGTGTTT 59.628 34.615 0.00 0.00 0.00 2.83
504 505 4.875544 ATATGAAATCCGACCGTGTTTG 57.124 40.909 0.00 0.00 0.00 2.93
505 506 0.589223 TGAAATCCGACCGTGTTTGC 59.411 50.000 0.00 0.00 0.00 3.68
506 507 0.589223 GAAATCCGACCGTGTTTGCA 59.411 50.000 0.00 0.00 0.00 4.08
507 508 1.199097 GAAATCCGACCGTGTTTGCAT 59.801 47.619 0.00 0.00 0.00 3.96
508 509 2.102070 AATCCGACCGTGTTTGCATA 57.898 45.000 0.00 0.00 0.00 3.14
509 510 2.102070 ATCCGACCGTGTTTGCATAA 57.898 45.000 0.00 0.00 0.00 1.90
510 511 1.880271 TCCGACCGTGTTTGCATAAA 58.120 45.000 0.00 0.00 0.00 1.40
511 512 2.428491 TCCGACCGTGTTTGCATAAAT 58.572 42.857 0.00 0.00 0.00 1.40
512 513 2.814919 TCCGACCGTGTTTGCATAAATT 59.185 40.909 0.00 0.00 0.00 1.82
513 514 3.253677 TCCGACCGTGTTTGCATAAATTT 59.746 39.130 0.00 0.00 0.00 1.82
514 515 3.984633 CCGACCGTGTTTGCATAAATTTT 59.015 39.130 0.00 0.00 0.00 1.82
515 516 4.446051 CCGACCGTGTTTGCATAAATTTTT 59.554 37.500 0.00 0.00 0.00 1.94
516 517 5.629849 CCGACCGTGTTTGCATAAATTTTTA 59.370 36.000 0.00 0.00 0.00 1.52
517 518 6.309251 CCGACCGTGTTTGCATAAATTTTTAT 59.691 34.615 0.00 0.00 33.82 1.40
518 519 7.380320 CGACCGTGTTTGCATAAATTTTTATC 58.620 34.615 0.00 0.00 31.28 1.75
519 520 7.462200 CGACCGTGTTTGCATAAATTTTTATCC 60.462 37.037 0.00 0.00 31.28 2.59
520 521 6.309251 ACCGTGTTTGCATAAATTTTTATCCG 59.691 34.615 0.00 0.00 31.28 4.18
521 522 6.528423 CCGTGTTTGCATAAATTTTTATCCGA 59.472 34.615 0.00 0.00 31.28 4.55
522 523 7.380320 CGTGTTTGCATAAATTTTTATCCGAC 58.620 34.615 0.00 0.00 31.28 4.79
523 524 7.272515 CGTGTTTGCATAAATTTTTATCCGACT 59.727 33.333 0.00 0.00 31.28 4.18
524 525 8.372521 GTGTTTGCATAAATTTTTATCCGACTG 58.627 33.333 0.00 0.00 31.28 3.51
525 526 8.300286 TGTTTGCATAAATTTTTATCCGACTGA 58.700 29.630 0.00 0.00 31.28 3.41
526 527 9.301153 GTTTGCATAAATTTTTATCCGACTGAT 57.699 29.630 0.00 0.00 37.49 2.90
527 528 9.868277 TTTGCATAAATTTTTATCCGACTGATT 57.132 25.926 0.00 0.00 34.76 2.57
528 529 9.515020 TTGCATAAATTTTTATCCGACTGATTC 57.485 29.630 0.00 0.00 34.76 2.52
529 530 7.855409 TGCATAAATTTTTATCCGACTGATTCG 59.145 33.333 0.00 0.00 38.09 3.34
530 531 8.067784 GCATAAATTTTTATCCGACTGATTCGA 58.932 33.333 0.00 0.00 39.45 3.71
531 532 9.929722 CATAAATTTTTATCCGACTGATTCGAA 57.070 29.630 0.00 0.00 39.45 3.71
540 541 3.689897 GACTGATTCGAACTGTTGTCG 57.310 47.619 0.00 0.00 0.00 4.35
541 542 3.305964 GACTGATTCGAACTGTTGTCGA 58.694 45.455 0.00 0.00 0.00 4.20
543 544 4.116961 ACTGATTCGAACTGTTGTCGAAA 58.883 39.130 17.91 5.48 46.55 3.46
544 545 4.750098 ACTGATTCGAACTGTTGTCGAAAT 59.250 37.500 17.91 9.23 46.55 2.17
545 546 5.017484 TGATTCGAACTGTTGTCGAAATG 57.983 39.130 17.91 0.00 46.55 2.32
546 547 4.509970 TGATTCGAACTGTTGTCGAAATGT 59.490 37.500 17.91 5.47 46.55 2.71
547 548 5.692654 TGATTCGAACTGTTGTCGAAATGTA 59.307 36.000 17.91 5.76 46.55 2.29
548 549 6.367695 TGATTCGAACTGTTGTCGAAATGTAT 59.632 34.615 17.91 4.87 46.55 2.29
549 550 5.509605 TCGAACTGTTGTCGAAATGTATG 57.490 39.130 0.00 0.00 32.68 2.39
550 551 4.986034 TCGAACTGTTGTCGAAATGTATGT 59.014 37.500 0.00 0.00 32.68 2.29
551 552 5.072823 CGAACTGTTGTCGAAATGTATGTG 58.927 41.667 0.00 0.00 0.00 3.21
552 553 5.107645 CGAACTGTTGTCGAAATGTATGTGA 60.108 40.000 0.00 0.00 0.00 3.58
553 554 5.591643 ACTGTTGTCGAAATGTATGTGAC 57.408 39.130 0.00 0.00 0.00 3.67
554 555 5.297547 ACTGTTGTCGAAATGTATGTGACT 58.702 37.500 0.00 0.00 0.00 3.41
555 556 6.452242 ACTGTTGTCGAAATGTATGTGACTA 58.548 36.000 0.00 0.00 0.00 2.59
556 557 6.365247 ACTGTTGTCGAAATGTATGTGACTAC 59.635 38.462 0.00 0.00 36.37 2.73
557 558 6.217294 TGTTGTCGAAATGTATGTGACTACA 58.783 36.000 4.33 4.33 40.89 2.74
558 559 6.364976 TGTTGTCGAAATGTATGTGACTACAG 59.635 38.462 4.33 0.00 39.26 2.74
559 560 6.020971 TGTCGAAATGTATGTGACTACAGT 57.979 37.500 0.00 0.00 40.79 3.55
560 561 6.452242 TGTCGAAATGTATGTGACTACAGTT 58.548 36.000 7.31 7.31 41.19 3.16
561 562 6.364976 TGTCGAAATGTATGTGACTACAGTTG 59.635 38.462 10.78 5.97 39.30 3.16
562 563 6.584942 GTCGAAATGTATGTGACTACAGTTGA 59.415 38.462 10.78 7.46 39.30 3.18
563 564 7.115805 GTCGAAATGTATGTGACTACAGTTGAA 59.884 37.037 10.78 0.53 39.30 2.69
564 565 7.817478 TCGAAATGTATGTGACTACAGTTGAAT 59.183 33.333 10.78 0.00 39.30 2.57
565 566 7.899841 CGAAATGTATGTGACTACAGTTGAATG 59.100 37.037 10.78 0.00 39.30 2.67
566 567 7.615582 AATGTATGTGACTACAGTTGAATGG 57.384 36.000 0.00 0.00 40.79 3.16
567 568 4.935205 TGTATGTGACTACAGTTGAATGGC 59.065 41.667 0.00 0.00 40.79 4.40
568 569 3.769739 TGTGACTACAGTTGAATGGCT 57.230 42.857 0.00 0.00 31.91 4.75
569 570 3.402110 TGTGACTACAGTTGAATGGCTG 58.598 45.455 0.00 0.00 38.58 4.85
570 571 3.070878 TGTGACTACAGTTGAATGGCTGA 59.929 43.478 0.00 0.00 36.62 4.26
571 572 3.433615 GTGACTACAGTTGAATGGCTGAC 59.566 47.826 0.00 0.00 36.62 3.51
572 573 3.324846 TGACTACAGTTGAATGGCTGACT 59.675 43.478 0.00 0.00 36.62 3.41
573 574 3.929610 GACTACAGTTGAATGGCTGACTC 59.070 47.826 0.00 0.00 36.62 3.36
574 575 2.191128 ACAGTTGAATGGCTGACTCC 57.809 50.000 0.00 0.00 36.62 3.85
575 576 1.271597 ACAGTTGAATGGCTGACTCCC 60.272 52.381 0.00 0.00 36.62 4.30
576 577 0.036010 AGTTGAATGGCTGACTCCCG 60.036 55.000 0.00 0.00 0.00 5.14
577 578 1.377202 TTGAATGGCTGACTCCCGC 60.377 57.895 0.00 0.00 0.00 6.13
578 579 2.123248 TTGAATGGCTGACTCCCGCA 62.123 55.000 0.00 0.00 0.00 5.69
579 580 1.153086 GAATGGCTGACTCCCGCAT 60.153 57.895 0.00 0.00 0.00 4.73
580 581 1.153086 AATGGCTGACTCCCGCATC 60.153 57.895 0.00 0.00 0.00 3.91
581 582 2.615227 AATGGCTGACTCCCGCATCC 62.615 60.000 0.00 0.00 0.00 3.51
582 583 4.899239 GGCTGACTCCCGCATCCG 62.899 72.222 0.00 0.00 0.00 4.18
583 584 4.148825 GCTGACTCCCGCATCCGT 62.149 66.667 0.00 0.00 0.00 4.69
584 585 2.202797 CTGACTCCCGCATCCGTG 60.203 66.667 0.00 0.00 0.00 4.94
585 586 2.994995 TGACTCCCGCATCCGTGT 60.995 61.111 0.00 0.00 0.00 4.49
586 587 2.202756 GACTCCCGCATCCGTGTC 60.203 66.667 0.00 0.00 0.00 3.67
587 588 2.680352 ACTCCCGCATCCGTGTCT 60.680 61.111 0.00 0.00 0.00 3.41
588 589 1.379443 ACTCCCGCATCCGTGTCTA 60.379 57.895 0.00 0.00 0.00 2.59
589 590 0.755698 ACTCCCGCATCCGTGTCTAT 60.756 55.000 0.00 0.00 0.00 1.98
590 591 0.319040 CTCCCGCATCCGTGTCTATG 60.319 60.000 0.00 0.00 0.00 2.23
591 592 1.300931 CCCGCATCCGTGTCTATGG 60.301 63.158 0.00 0.00 0.00 2.74
592 593 1.739667 CCGCATCCGTGTCTATGGA 59.260 57.895 0.00 0.00 45.78 3.41
593 594 0.597637 CCGCATCCGTGTCTATGGAC 60.598 60.000 1.56 1.56 44.57 4.02
594 595 0.385751 CGCATCCGTGTCTATGGACT 59.614 55.000 10.82 0.00 44.57 3.85
595 596 1.858091 GCATCCGTGTCTATGGACTG 58.142 55.000 10.82 3.18 44.57 3.51
596 597 1.539065 GCATCCGTGTCTATGGACTGG 60.539 57.143 10.82 11.91 44.57 4.00
597 598 1.757118 CATCCGTGTCTATGGACTGGT 59.243 52.381 10.82 1.71 44.57 4.00
598 599 1.471119 TCCGTGTCTATGGACTGGTC 58.529 55.000 10.82 0.00 42.54 4.02
599 600 3.278129 ATCCGTGTCTATGGACTGGTCC 61.278 54.545 10.82 12.43 44.57 4.46
607 608 2.346365 GGACTGGTCCCCACGAAC 59.654 66.667 8.48 0.00 43.94 3.95
608 609 2.214920 GGACTGGTCCCCACGAACT 61.215 63.158 8.48 0.00 43.94 3.01
609 610 0.901580 GGACTGGTCCCCACGAACTA 60.902 60.000 8.48 0.00 43.94 2.24
610 611 0.971386 GACTGGTCCCCACGAACTAA 59.029 55.000 0.00 0.00 0.00 2.24
611 612 1.553704 GACTGGTCCCCACGAACTAAT 59.446 52.381 0.00 0.00 0.00 1.73
612 613 1.278127 ACTGGTCCCCACGAACTAATG 59.722 52.381 0.00 0.00 0.00 1.90
613 614 0.035820 TGGTCCCCACGAACTAATGC 60.036 55.000 0.00 0.00 0.00 3.56
614 615 0.035820 GGTCCCCACGAACTAATGCA 60.036 55.000 0.00 0.00 0.00 3.96
615 616 1.369625 GTCCCCACGAACTAATGCAG 58.630 55.000 0.00 0.00 0.00 4.41
616 617 0.251916 TCCCCACGAACTAATGCAGG 59.748 55.000 0.00 0.00 0.00 4.85
617 618 0.251916 CCCCACGAACTAATGCAGGA 59.748 55.000 0.00 0.00 0.00 3.86
618 619 1.656652 CCCACGAACTAATGCAGGAG 58.343 55.000 0.00 0.00 0.00 3.69
619 620 1.207089 CCCACGAACTAATGCAGGAGA 59.793 52.381 4.72 0.00 0.00 3.71
620 621 2.354704 CCCACGAACTAATGCAGGAGAA 60.355 50.000 4.72 0.00 0.00 2.87
621 622 3.334691 CCACGAACTAATGCAGGAGAAA 58.665 45.455 4.72 0.00 0.00 2.52
622 623 3.751175 CCACGAACTAATGCAGGAGAAAA 59.249 43.478 4.72 0.00 0.00 2.29
623 624 4.396166 CCACGAACTAATGCAGGAGAAAAT 59.604 41.667 4.72 0.00 0.00 1.82
624 625 5.106157 CCACGAACTAATGCAGGAGAAAATT 60.106 40.000 4.72 0.00 0.00 1.82
625 626 6.381801 CACGAACTAATGCAGGAGAAAATTT 58.618 36.000 4.72 0.00 0.00 1.82
626 627 7.361713 CCACGAACTAATGCAGGAGAAAATTTA 60.362 37.037 4.72 0.00 0.00 1.40
627 628 8.184192 CACGAACTAATGCAGGAGAAAATTTAT 58.816 33.333 4.72 0.00 0.00 1.40
628 629 8.184192 ACGAACTAATGCAGGAGAAAATTTATG 58.816 33.333 4.72 0.00 0.00 1.90
629 630 7.645340 CGAACTAATGCAGGAGAAAATTTATGG 59.355 37.037 4.72 0.00 0.00 2.74
630 631 7.352079 ACTAATGCAGGAGAAAATTTATGGG 57.648 36.000 4.72 0.00 0.00 4.00
631 632 6.897413 ACTAATGCAGGAGAAAATTTATGGGT 59.103 34.615 4.72 0.00 0.00 4.51
632 633 6.625532 AATGCAGGAGAAAATTTATGGGTT 57.374 33.333 0.00 0.00 0.00 4.11
633 634 5.404466 TGCAGGAGAAAATTTATGGGTTG 57.596 39.130 0.00 0.00 0.00 3.77
634 635 4.183865 GCAGGAGAAAATTTATGGGTTGC 58.816 43.478 0.00 0.00 0.00 4.17
635 636 4.081476 GCAGGAGAAAATTTATGGGTTGCT 60.081 41.667 0.00 0.00 0.00 3.91
636 637 5.413499 CAGGAGAAAATTTATGGGTTGCTG 58.587 41.667 0.00 0.00 0.00 4.41
637 638 5.047092 CAGGAGAAAATTTATGGGTTGCTGT 60.047 40.000 0.00 0.00 0.00 4.40
638 639 5.543790 AGGAGAAAATTTATGGGTTGCTGTT 59.456 36.000 0.00 0.00 0.00 3.16
639 640 5.639082 GGAGAAAATTTATGGGTTGCTGTTG 59.361 40.000 0.00 0.00 0.00 3.33
640 641 5.550290 AGAAAATTTATGGGTTGCTGTTGG 58.450 37.500 0.00 0.00 0.00 3.77
641 642 3.979101 AATTTATGGGTTGCTGTTGGG 57.021 42.857 0.00 0.00 0.00 4.12
642 643 2.685106 TTTATGGGTTGCTGTTGGGA 57.315 45.000 0.00 0.00 0.00 4.37
643 644 2.917713 TTATGGGTTGCTGTTGGGAT 57.082 45.000 0.00 0.00 0.00 3.85
644 645 2.142356 TATGGGTTGCTGTTGGGATG 57.858 50.000 0.00 0.00 0.00 3.51
645 646 1.259840 ATGGGTTGCTGTTGGGATGC 61.260 55.000 0.00 0.00 0.00 3.91
646 647 2.649129 GGGTTGCTGTTGGGATGCC 61.649 63.158 0.00 0.00 0.00 4.40
647 648 2.649129 GGTTGCTGTTGGGATGCCC 61.649 63.158 0.00 0.00 45.71 5.36
648 649 1.607467 GTTGCTGTTGGGATGCCCT 60.607 57.895 0.00 0.00 45.70 5.19
649 650 1.155859 TTGCTGTTGGGATGCCCTT 59.844 52.632 0.00 0.00 45.70 3.95
650 651 0.407528 TTGCTGTTGGGATGCCCTTA 59.592 50.000 0.00 0.00 45.70 2.69
651 652 0.407528 TGCTGTTGGGATGCCCTTAA 59.592 50.000 0.00 0.00 45.70 1.85
652 653 1.006998 TGCTGTTGGGATGCCCTTAAT 59.993 47.619 0.00 0.00 45.70 1.40
653 654 1.683385 GCTGTTGGGATGCCCTTAATC 59.317 52.381 0.00 0.00 45.70 1.75
654 655 2.949963 GCTGTTGGGATGCCCTTAATCA 60.950 50.000 0.00 0.00 45.70 2.57
655 656 3.364549 CTGTTGGGATGCCCTTAATCAA 58.635 45.455 0.00 0.00 45.70 2.57
656 657 3.096092 TGTTGGGATGCCCTTAATCAAC 58.904 45.455 0.00 0.00 45.70 3.18
657 658 3.096092 GTTGGGATGCCCTTAATCAACA 58.904 45.455 0.00 0.00 45.70 3.33
658 659 2.733956 TGGGATGCCCTTAATCAACAC 58.266 47.619 0.00 0.00 45.70 3.32
659 660 1.676006 GGGATGCCCTTAATCAACACG 59.324 52.381 0.00 0.00 41.34 4.49
660 661 1.065551 GGATGCCCTTAATCAACACGC 59.934 52.381 0.00 0.00 0.00 5.34
661 662 1.742831 GATGCCCTTAATCAACACGCA 59.257 47.619 0.00 0.00 0.00 5.24
662 663 1.164411 TGCCCTTAATCAACACGCAG 58.836 50.000 0.00 0.00 0.00 5.18
663 664 1.271108 TGCCCTTAATCAACACGCAGA 60.271 47.619 0.00 0.00 0.00 4.26
664 665 2.017049 GCCCTTAATCAACACGCAGAT 58.983 47.619 0.00 0.00 0.00 2.90
665 666 3.202906 GCCCTTAATCAACACGCAGATA 58.797 45.455 0.00 0.00 0.00 1.98
666 667 3.815401 GCCCTTAATCAACACGCAGATAT 59.185 43.478 0.00 0.00 0.00 1.63
667 668 4.994852 GCCCTTAATCAACACGCAGATATA 59.005 41.667 0.00 0.00 0.00 0.86
668 669 5.643777 GCCCTTAATCAACACGCAGATATAT 59.356 40.000 0.00 0.00 0.00 0.86
669 670 6.402550 GCCCTTAATCAACACGCAGATATATG 60.403 42.308 0.00 0.00 0.00 1.78
670 671 6.650807 CCCTTAATCAACACGCAGATATATGT 59.349 38.462 0.00 0.00 0.00 2.29
671 672 7.173218 CCCTTAATCAACACGCAGATATATGTT 59.827 37.037 0.00 0.00 35.69 2.71
674 675 4.472691 CAACACGCAGATATATGTTGGG 57.527 45.455 7.85 7.64 45.24 4.12
675 676 4.126437 CAACACGCAGATATATGTTGGGA 58.874 43.478 14.26 0.00 45.24 4.37
676 677 3.995199 ACACGCAGATATATGTTGGGAG 58.005 45.455 14.26 10.37 0.00 4.30
677 678 3.388024 ACACGCAGATATATGTTGGGAGT 59.612 43.478 14.26 10.83 0.00 3.85
678 679 3.742882 CACGCAGATATATGTTGGGAGTG 59.257 47.826 14.26 3.97 0.00 3.51
679 680 3.244215 ACGCAGATATATGTTGGGAGTGG 60.244 47.826 14.26 0.00 0.00 4.00
680 681 3.077359 GCAGATATATGTTGGGAGTGGC 58.923 50.000 0.00 0.00 0.00 5.01
681 682 3.244700 GCAGATATATGTTGGGAGTGGCT 60.245 47.826 0.00 0.00 0.00 4.75
682 683 4.321718 CAGATATATGTTGGGAGTGGCTG 58.678 47.826 0.00 0.00 0.00 4.85
683 684 4.040829 CAGATATATGTTGGGAGTGGCTGA 59.959 45.833 0.00 0.00 0.00 4.26
684 685 4.660303 AGATATATGTTGGGAGTGGCTGAA 59.340 41.667 0.00 0.00 0.00 3.02
685 686 2.787473 TATGTTGGGAGTGGCTGAAG 57.213 50.000 0.00 0.00 0.00 3.02
686 687 0.773644 ATGTTGGGAGTGGCTGAAGT 59.226 50.000 0.00 0.00 0.00 3.01
687 688 0.550914 TGTTGGGAGTGGCTGAAGTT 59.449 50.000 0.00 0.00 0.00 2.66
688 689 1.771854 TGTTGGGAGTGGCTGAAGTTA 59.228 47.619 0.00 0.00 0.00 2.24
689 690 2.375174 TGTTGGGAGTGGCTGAAGTTAT 59.625 45.455 0.00 0.00 0.00 1.89
690 691 3.585289 TGTTGGGAGTGGCTGAAGTTATA 59.415 43.478 0.00 0.00 0.00 0.98
691 692 3.906720 TGGGAGTGGCTGAAGTTATAC 57.093 47.619 0.00 0.00 0.00 1.47
692 693 3.178046 TGGGAGTGGCTGAAGTTATACA 58.822 45.455 0.00 0.00 0.00 2.29
693 694 3.197766 TGGGAGTGGCTGAAGTTATACAG 59.802 47.826 0.00 0.00 37.22 2.74
694 695 3.197983 GGGAGTGGCTGAAGTTATACAGT 59.802 47.826 0.00 0.00 36.62 3.55
695 696 4.323562 GGGAGTGGCTGAAGTTATACAGTT 60.324 45.833 0.00 0.00 36.62 3.16
696 697 5.246307 GGAGTGGCTGAAGTTATACAGTTT 58.754 41.667 0.00 0.00 36.62 2.66
697 698 5.705905 GGAGTGGCTGAAGTTATACAGTTTT 59.294 40.000 0.00 0.00 36.62 2.43
698 699 6.348540 GGAGTGGCTGAAGTTATACAGTTTTG 60.349 42.308 0.00 0.00 36.62 2.44
699 700 6.062095 AGTGGCTGAAGTTATACAGTTTTGT 58.938 36.000 0.00 0.00 41.39 2.83
700 701 6.204882 AGTGGCTGAAGTTATACAGTTTTGTC 59.795 38.462 0.00 0.00 38.76 3.18
701 702 5.472137 TGGCTGAAGTTATACAGTTTTGTCC 59.528 40.000 0.00 0.00 38.76 4.02
702 703 5.106277 GGCTGAAGTTATACAGTTTTGTCCC 60.106 44.000 0.00 0.00 38.76 4.46
703 704 5.705905 GCTGAAGTTATACAGTTTTGTCCCT 59.294 40.000 0.00 0.00 38.76 4.20
704 705 6.348540 GCTGAAGTTATACAGTTTTGTCCCTG 60.349 42.308 0.00 0.00 38.76 4.45
705 706 6.833041 TGAAGTTATACAGTTTTGTCCCTGA 58.167 36.000 0.00 0.00 38.76 3.86
706 707 7.284074 TGAAGTTATACAGTTTTGTCCCTGAA 58.716 34.615 0.00 0.00 38.76 3.02
707 708 7.444183 TGAAGTTATACAGTTTTGTCCCTGAAG 59.556 37.037 0.00 0.00 38.76 3.02
708 709 7.074653 AGTTATACAGTTTTGTCCCTGAAGA 57.925 36.000 0.00 0.00 38.76 2.87
709 710 7.690256 AGTTATACAGTTTTGTCCCTGAAGAT 58.310 34.615 0.00 0.00 38.76 2.40
710 711 7.607991 AGTTATACAGTTTTGTCCCTGAAGATG 59.392 37.037 0.00 0.00 38.76 2.90
711 712 2.887152 ACAGTTTTGTCCCTGAAGATGC 59.113 45.455 0.00 0.00 29.46 3.91
712 713 2.229784 CAGTTTTGTCCCTGAAGATGCC 59.770 50.000 0.00 0.00 0.00 4.40
713 714 2.158475 AGTTTTGTCCCTGAAGATGCCA 60.158 45.455 0.00 0.00 0.00 4.92
714 715 2.827921 GTTTTGTCCCTGAAGATGCCAT 59.172 45.455 0.00 0.00 0.00 4.40
715 716 4.016444 GTTTTGTCCCTGAAGATGCCATA 58.984 43.478 0.00 0.00 0.00 2.74
716 717 4.314522 TTTGTCCCTGAAGATGCCATAA 57.685 40.909 0.00 0.00 0.00 1.90
717 718 3.565764 TGTCCCTGAAGATGCCATAAG 57.434 47.619 0.00 0.00 0.00 1.73
718 719 2.846206 TGTCCCTGAAGATGCCATAAGT 59.154 45.455 0.00 0.00 0.00 2.24
719 720 3.209410 GTCCCTGAAGATGCCATAAGTG 58.791 50.000 0.00 0.00 0.00 3.16
720 721 1.952296 CCCTGAAGATGCCATAAGTGC 59.048 52.381 0.00 0.00 0.00 4.40
721 722 2.646930 CCTGAAGATGCCATAAGTGCA 58.353 47.619 0.00 0.00 43.97 4.57
722 723 3.018856 CCTGAAGATGCCATAAGTGCAA 58.981 45.455 0.00 0.00 42.92 4.08
723 724 3.635373 CCTGAAGATGCCATAAGTGCAAT 59.365 43.478 0.00 0.00 42.92 3.56
724 725 4.823442 CCTGAAGATGCCATAAGTGCAATA 59.177 41.667 0.00 0.00 42.92 1.90
736 737 3.988976 AGTGCAATACTGTGAGTCCAT 57.011 42.857 0.00 0.00 38.49 3.41
811 813 4.646945 TGGGTTTTCTTGTCACATTTGCTA 59.353 37.500 0.00 0.00 0.00 3.49
850 859 8.978564 TCTATTGAGAATCGATTTAGATCTGC 57.021 34.615 12.81 0.00 40.47 4.26
1040 1049 0.598680 GATTCATACCGCTGCTCGCT 60.599 55.000 0.00 0.00 36.73 4.93
1155 1183 2.180204 GGCAACGTGTCAGTGCAGT 61.180 57.895 11.00 0.00 0.00 4.40
1377 1405 2.431942 CGGTACCACGCGCTCTTT 60.432 61.111 13.54 0.00 0.00 2.52
1752 1786 1.006878 AGGAAGGACTACGCCTACCTT 59.993 52.381 0.00 0.00 44.08 3.50
1760 1794 2.808761 TACGCCTACCTTGCCTCCCA 62.809 60.000 0.00 0.00 0.00 4.37
2052 2143 1.875813 CGAGCGTCTGAGCATGGAC 60.876 63.158 0.00 0.00 40.15 4.02
2062 2153 2.230994 GAGCATGGACGAGCTGGACA 62.231 60.000 1.44 1.31 42.04 4.02
2142 2275 4.473520 CAGAAGGCGATGGGCGGT 62.474 66.667 0.00 0.00 44.92 5.68
2232 2365 3.246936 CCGTGCTGAATCTCACATACATG 59.753 47.826 0.00 0.00 33.03 3.21
2301 2440 5.363868 TGTCTAGCCTACATTATTGAGCAGT 59.636 40.000 0.00 0.00 0.00 4.40
2320 2459 5.955355 AGCAGTACTCTCATTTCTACTCCTT 59.045 40.000 0.00 0.00 0.00 3.36
2321 2460 6.039616 GCAGTACTCTCATTTCTACTCCTTG 58.960 44.000 0.00 0.00 0.00 3.61
2322 2461 6.127591 GCAGTACTCTCATTTCTACTCCTTGA 60.128 42.308 0.00 0.00 0.00 3.02
2323 2462 7.254852 CAGTACTCTCATTTCTACTCCTTGAC 58.745 42.308 0.00 0.00 0.00 3.18
2325 2464 5.337788 ACTCTCATTTCTACTCCTTGACCT 58.662 41.667 0.00 0.00 0.00 3.85
2347 2487 3.496675 GGGAAATGACACCCTAGCC 57.503 57.895 0.00 0.00 42.56 3.93
2486 2626 4.851843 AGTAAATTAGGTGTTACAGCCCC 58.148 43.478 11.14 0.00 33.49 5.80
2556 2696 7.023197 AGGTTACATTTTATAACGTGATGGC 57.977 36.000 0.00 0.00 34.02 4.40
2557 2697 6.826741 AGGTTACATTTTATAACGTGATGGCT 59.173 34.615 0.00 0.00 34.02 4.75
2558 2698 7.988599 AGGTTACATTTTATAACGTGATGGCTA 59.011 33.333 0.00 0.00 34.02 3.93
2559 2699 8.280497 GGTTACATTTTATAACGTGATGGCTAG 58.720 37.037 0.00 0.00 34.02 3.42
2560 2700 9.037737 GTTACATTTTATAACGTGATGGCTAGA 57.962 33.333 0.00 0.00 0.00 2.43
2561 2701 7.478520 ACATTTTATAACGTGATGGCTAGAC 57.521 36.000 0.00 0.00 0.00 2.59
2878 3023 3.244911 TGTCCCAGCTAGAAAAGAAAGGG 60.245 47.826 0.00 0.00 34.86 3.95
3446 3651 2.574006 TTCAGATTGCAAGAGTGGCT 57.426 45.000 4.94 0.00 0.00 4.75
3784 3996 4.953579 TCCACAGACATGTAGCATGTACTA 59.046 41.667 13.82 0.00 37.65 1.82
3824 4036 7.938563 TTCAAATTCAAAAAGTACAATCGGG 57.061 32.000 0.00 0.00 0.00 5.14
3945 4157 6.326583 TCATTCCCTTCAATTACGTCTCCTAT 59.673 38.462 0.00 0.00 0.00 2.57
3949 4161 3.364889 TCAATTACGTCTCCTATGCGG 57.635 47.619 0.00 0.00 0.00 5.69
4005 4225 8.082242 ACTGAGATATGCAACTTTTAAACAACC 58.918 33.333 0.00 0.00 0.00 3.77
4043 4263 7.310237 CCTGATTCAGTTTCATCAAGGGAATTT 60.310 37.037 12.54 0.00 0.00 1.82
4049 4269 8.869109 TCAGTTTCATCAAGGGAATTTAAACAT 58.131 29.630 0.00 0.00 0.00 2.71
4321 4566 8.076178 AGAAGAAGGTATGTGAACAAAAATTCG 58.924 33.333 0.00 0.00 0.00 3.34
4623 4944 2.069273 GAAACTGACCACGGTGATGAG 58.931 52.381 10.28 0.00 35.61 2.90
4823 5150 2.431683 GTGTCCAAGGCCTCTGCA 59.568 61.111 5.23 0.00 40.13 4.41
4835 5162 0.979709 CCTCTGCAGTCCTGGATGGA 60.980 60.000 14.67 0.02 43.86 3.41
4875 5204 2.037641 AGTAGACATCAGCACAGCACAA 59.962 45.455 0.00 0.00 0.00 3.33
4876 5205 1.233019 AGACATCAGCACAGCACAAC 58.767 50.000 0.00 0.00 0.00 3.32
4877 5206 0.946528 GACATCAGCACAGCACAACA 59.053 50.000 0.00 0.00 0.00 3.33
4878 5207 0.664761 ACATCAGCACAGCACAACAC 59.335 50.000 0.00 0.00 0.00 3.32
4879 5208 0.664224 CATCAGCACAGCACAACACA 59.336 50.000 0.00 0.00 0.00 3.72
4883 5212 1.587088 GCACAGCACAACACAGCAC 60.587 57.895 0.00 0.00 0.00 4.40
4912 5241 2.306512 ACCGGTGCAAATAAGTAGGGAA 59.693 45.455 6.12 0.00 0.00 3.97
4928 5257 6.249192 AGTAGGGAAAGGGAAAAAGAATCAG 58.751 40.000 0.00 0.00 0.00 2.90
4978 5308 3.009584 ACCCCCTTGTTGATTCTCTCTTC 59.990 47.826 0.00 0.00 0.00 2.87
5011 5341 7.408500 GCAGCAATAATTTTCGCAAAAACATTG 60.408 33.333 11.83 11.83 39.83 2.82
5034 5364 4.202131 GGAGAGTAGCGCCAATAAGTTAGT 60.202 45.833 2.29 0.00 36.33 2.24
5143 5473 1.136085 CAGTTTATTGGCGTGGTGTCG 60.136 52.381 0.00 0.00 0.00 4.35
5203 5533 0.943835 CAACATCTGACGACCGTGCA 60.944 55.000 0.00 0.00 0.00 4.57
5209 5539 1.542472 TCTGACGACCGTGCAGATTTA 59.458 47.619 15.37 1.48 34.02 1.40
5212 5542 1.593006 GACGACCGTGCAGATTTATGG 59.407 52.381 0.00 0.00 0.00 2.74
5362 5706 2.348032 GCACGCGAAAGATTCTATGAGC 60.348 50.000 15.93 0.00 0.00 4.26
5418 5763 7.507616 TGGATCGTGCCCCTTTATTTATTTATT 59.492 33.333 0.00 0.00 0.00 1.40
5419 5764 8.364894 GGATCGTGCCCCTTTATTTATTTATTT 58.635 33.333 0.00 0.00 0.00 1.40
5505 5851 3.056107 TCGGCTGTTATCTTGCTTACACT 60.056 43.478 0.00 0.00 0.00 3.55
5509 5855 4.142816 GCTGTTATCTTGCTTACACTGTGG 60.143 45.833 13.09 0.00 0.00 4.17
5549 5895 4.629634 CACACATGTAAAGTCTCCGCATAA 59.370 41.667 0.00 0.00 0.00 1.90
5564 5910 3.549827 CCGCATAAAGTTCAAGTGCACAA 60.550 43.478 21.04 1.11 35.63 3.33
5578 5924 2.030540 GTGCACAATGCTCATCAAGTGT 60.031 45.455 13.17 0.00 45.31 3.55
5586 5932 8.501580 CACAATGCTCATCAAGTGTATTATAGG 58.498 37.037 0.00 0.00 33.08 2.57
5588 5934 6.173427 TGCTCATCAAGTGTATTATAGGCA 57.827 37.500 0.00 0.00 0.00 4.75
5589 5935 5.991606 TGCTCATCAAGTGTATTATAGGCAC 59.008 40.000 0.00 0.00 0.00 5.01
5590 5936 5.991606 GCTCATCAAGTGTATTATAGGCACA 59.008 40.000 0.00 0.00 35.75 4.57
5591 5937 6.483307 GCTCATCAAGTGTATTATAGGCACAA 59.517 38.462 0.00 0.00 35.75 3.33
5592 5938 7.307632 GCTCATCAAGTGTATTATAGGCACAAG 60.308 40.741 0.00 0.00 35.75 3.16
5620 7233 6.904011 CGCAATGTTTCAAAATTGTAAAAGCA 59.096 30.769 4.68 0.00 36.39 3.91
5621 7234 7.097490 CGCAATGTTTCAAAATTGTAAAAGCAC 60.097 33.333 4.68 0.00 36.39 4.40
5622 7235 7.695618 GCAATGTTTCAAAATTGTAAAAGCACA 59.304 29.630 4.68 0.00 36.39 4.57
5623 7236 9.552114 CAATGTTTCAAAATTGTAAAAGCACAA 57.448 25.926 0.00 0.00 42.32 3.33
5624 7237 9.553418 AATGTTTCAAAATTGTAAAAGCACAAC 57.447 25.926 0.00 0.00 41.02 3.32
5625 7238 7.522374 TGTTTCAAAATTGTAAAAGCACAACC 58.478 30.769 0.00 0.00 41.02 3.77
5626 7239 7.173218 TGTTTCAAAATTGTAAAAGCACAACCA 59.827 29.630 0.00 0.00 41.02 3.67
5627 7240 7.856145 TTCAAAATTGTAAAAGCACAACCAT 57.144 28.000 0.00 0.00 41.02 3.55
5628 7241 7.856145 TCAAAATTGTAAAAGCACAACCATT 57.144 28.000 0.00 0.00 41.02 3.16
5629 7242 7.692088 TCAAAATTGTAAAAGCACAACCATTG 58.308 30.769 0.00 0.00 41.02 2.82
5630 7243 6.616774 AAATTGTAAAAGCACAACCATTGG 57.383 33.333 0.00 0.00 41.02 3.16
5631 7244 4.744795 TTGTAAAAGCACAACCATTGGT 57.255 36.364 1.37 1.37 37.65 3.67
5633 7246 4.688021 TGTAAAAGCACAACCATTGGTTC 58.312 39.130 18.27 7.79 43.05 3.62
5634 7247 2.507339 AAAGCACAACCATTGGTTCG 57.493 45.000 18.27 15.25 43.05 3.95
5635 7248 0.673437 AAGCACAACCATTGGTTCGG 59.327 50.000 18.27 13.69 43.05 4.30
5636 7249 1.178534 AGCACAACCATTGGTTCGGG 61.179 55.000 18.27 15.12 43.05 5.14
5637 7250 1.460273 GCACAACCATTGGTTCGGGT 61.460 55.000 18.27 10.77 43.05 5.28
5638 7251 0.313672 CACAACCATTGGTTCGGGTG 59.686 55.000 18.27 18.07 43.05 4.61
5639 7252 0.825840 ACAACCATTGGTTCGGGTGG 60.826 55.000 18.27 8.73 43.05 4.61
5640 7253 0.538516 CAACCATTGGTTCGGGTGGA 60.539 55.000 18.27 0.00 43.05 4.02
5641 7254 0.251165 AACCATTGGTTCGGGTGGAG 60.251 55.000 15.48 0.00 43.05 3.86
5642 7255 2.046285 CCATTGGTTCGGGTGGAGC 61.046 63.158 0.00 0.00 33.53 4.70
5643 7256 1.002134 CATTGGTTCGGGTGGAGCT 60.002 57.895 0.00 0.00 0.00 4.09
5644 7257 0.251916 CATTGGTTCGGGTGGAGCTA 59.748 55.000 0.00 0.00 0.00 3.32
5662 7275 5.488341 GAGCTATCCCACTTGAAGTAAACA 58.512 41.667 0.00 0.00 0.00 2.83
5665 7278 3.547054 TCCCACTTGAAGTAAACACGT 57.453 42.857 0.00 0.00 0.00 4.49
5688 7301 3.812053 CCGGACAAATGATCAATCCTCTC 59.188 47.826 0.00 0.00 0.00 3.20
5705 7318 3.506810 CTCTCGAAGAATCAAAGCGACT 58.493 45.455 0.00 0.00 34.09 4.18
5713 7326 1.812235 ATCAAAGCGACTGCACATCA 58.188 45.000 0.00 0.00 46.23 3.07
5733 7346 4.529897 TCATGCAAGATGATTTACAGGCT 58.470 39.130 0.00 0.00 0.00 4.58
5745 7358 0.610174 TACAGGCTTGGCACTGAGAG 59.390 55.000 10.22 0.00 38.09 3.20
5746 7359 2.039405 CAGGCTTGGCACTGAGAGC 61.039 63.158 0.00 0.00 36.86 4.09
5821 7467 1.244019 AAACATCTCACGCCTTGGGC 61.244 55.000 0.00 0.00 46.75 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 0.248661 CGGTCTCATCGAACATCGCT 60.249 55.000 0.00 0.00 40.21 4.93
58 59 1.384525 CTCCTTCTCGTCGGTCTCAT 58.615 55.000 0.00 0.00 0.00 2.90
80 81 4.148825 GTGGCCTCGGCGATGTCT 62.149 66.667 17.21 0.00 43.06 3.41
103 104 2.047274 CTTCATGGTCGTGGCCGT 60.047 61.111 0.00 0.00 35.01 5.68
105 106 2.045926 AGCTTCATGGTCGTGGCC 60.046 61.111 0.00 0.00 0.00 5.36
111 112 1.639298 GACGTGCCAGCTTCATGGTC 61.639 60.000 0.00 6.90 42.75 4.02
141 142 1.062880 CTACTCTTCCTCGCTGTCGAC 59.937 57.143 9.11 9.11 40.21 4.20
142 143 1.338864 ACTACTCTTCCTCGCTGTCGA 60.339 52.381 0.00 0.00 43.28 4.20
145 146 0.528470 GCACTACTCTTCCTCGCTGT 59.472 55.000 0.00 0.00 0.00 4.40
148 149 0.798771 CGTGCACTACTCTTCCTCGC 60.799 60.000 16.19 0.00 0.00 5.03
153 154 3.500014 GAACTACCGTGCACTACTCTTC 58.500 50.000 16.19 6.49 0.00 2.87
193 194 4.475135 GAGGAGCGGTGGCCTTCC 62.475 72.222 3.32 5.83 41.24 3.46
194 195 4.475135 GGAGGAGCGGTGGCCTTC 62.475 72.222 3.32 0.00 41.24 3.46
262 263 0.453282 CTTCATGTTGCCGACAAGCG 60.453 55.000 0.00 0.00 42.62 4.68
267 268 1.069227 GTTCACCTTCATGTTGCCGAC 60.069 52.381 0.00 0.00 0.00 4.79
268 269 1.234821 GTTCACCTTCATGTTGCCGA 58.765 50.000 0.00 0.00 0.00 5.54
284 285 2.879026 GACCTGGGAAGTGAAGTTGTTC 59.121 50.000 0.00 0.00 0.00 3.18
285 286 2.509964 AGACCTGGGAAGTGAAGTTGTT 59.490 45.455 0.00 0.00 0.00 2.83
287 288 2.551071 GGAGACCTGGGAAGTGAAGTTG 60.551 54.545 0.00 0.00 0.00 3.16
289 290 1.353091 GGAGACCTGGGAAGTGAAGT 58.647 55.000 0.00 0.00 0.00 3.01
334 335 2.165437 ACTGAAGCTTCGCCTTCTCTAG 59.835 50.000 21.11 11.76 41.36 2.43
336 337 0.972883 ACTGAAGCTTCGCCTTCTCT 59.027 50.000 21.11 0.00 41.36 3.10
345 346 1.067213 AGCCTCGAGAACTGAAGCTTC 60.067 52.381 19.89 19.89 28.94 3.86
346 347 0.972883 AGCCTCGAGAACTGAAGCTT 59.027 50.000 15.71 0.00 28.94 3.74
347 348 0.530288 GAGCCTCGAGAACTGAAGCT 59.470 55.000 15.71 12.06 35.89 3.74
348 349 0.800300 CGAGCCTCGAGAACTGAAGC 60.800 60.000 15.71 6.74 43.74 3.86
349 350 0.523966 ACGAGCCTCGAGAACTGAAG 59.476 55.000 22.80 7.19 43.74 3.02
350 351 0.241213 CACGAGCCTCGAGAACTGAA 59.759 55.000 22.80 0.00 43.74 3.02
351 352 1.587043 CCACGAGCCTCGAGAACTGA 61.587 60.000 22.80 0.00 43.74 3.41
352 353 1.153939 CCACGAGCCTCGAGAACTG 60.154 63.158 22.80 7.93 43.74 3.16
353 354 2.995872 GCCACGAGCCTCGAGAACT 61.996 63.158 22.80 11.04 43.74 3.01
354 355 2.507324 GCCACGAGCCTCGAGAAC 60.507 66.667 22.80 5.58 43.74 3.01
364 365 4.838152 CCCATGTCCGGCCACGAG 62.838 72.222 2.24 0.00 44.60 4.18
367 368 4.041762 TTCCCCATGTCCGGCCAC 62.042 66.667 2.24 0.00 0.00 5.01
368 369 4.041762 GTTCCCCATGTCCGGCCA 62.042 66.667 2.24 0.00 0.00 5.36
371 372 4.483243 CCCGTTCCCCATGTCCGG 62.483 72.222 0.00 0.00 38.39 5.14
372 373 3.712907 ACCCGTTCCCCATGTCCG 61.713 66.667 0.00 0.00 0.00 4.79
373 374 2.045340 CACCCGTTCCCCATGTCC 60.045 66.667 0.00 0.00 0.00 4.02
374 375 2.750237 GCACCCGTTCCCCATGTC 60.750 66.667 0.00 0.00 0.00 3.06
375 376 4.360405 GGCACCCGTTCCCCATGT 62.360 66.667 0.00 0.00 0.00 3.21
386 387 3.980442 TAAATGGTCGCCGGCACCC 62.980 63.158 31.95 27.40 32.24 4.61
387 388 2.437002 TAAATGGTCGCCGGCACC 60.437 61.111 29.98 29.98 0.00 5.01
388 389 0.814010 ATCTAAATGGTCGCCGGCAC 60.814 55.000 28.98 22.29 0.00 5.01
389 390 0.107410 AATCTAAATGGTCGCCGGCA 60.107 50.000 28.98 11.20 0.00 5.69
390 391 1.798813 CTAATCTAAATGGTCGCCGGC 59.201 52.381 19.07 19.07 0.00 6.13
391 392 2.224209 ACCTAATCTAAATGGTCGCCGG 60.224 50.000 0.00 0.00 0.00 6.13
392 393 3.107642 ACCTAATCTAAATGGTCGCCG 57.892 47.619 0.00 0.00 0.00 6.46
393 394 7.876582 AGTTAATACCTAATCTAAATGGTCGCC 59.123 37.037 0.00 0.00 34.33 5.54
394 395 8.828688 AGTTAATACCTAATCTAAATGGTCGC 57.171 34.615 0.00 0.00 34.33 5.19
411 412 8.083462 GTCTGGCTCTGAAGGTATAGTTAATAC 58.917 40.741 0.00 0.00 39.92 1.89
412 413 8.005388 AGTCTGGCTCTGAAGGTATAGTTAATA 58.995 37.037 0.00 0.00 0.00 0.98
413 414 6.841755 AGTCTGGCTCTGAAGGTATAGTTAAT 59.158 38.462 0.00 0.00 0.00 1.40
414 415 6.195700 AGTCTGGCTCTGAAGGTATAGTTAA 58.804 40.000 0.00 0.00 0.00 2.01
415 416 5.767670 AGTCTGGCTCTGAAGGTATAGTTA 58.232 41.667 0.00 0.00 0.00 2.24
416 417 4.615513 AGTCTGGCTCTGAAGGTATAGTT 58.384 43.478 0.00 0.00 0.00 2.24
417 418 4.258457 AGTCTGGCTCTGAAGGTATAGT 57.742 45.455 0.00 0.00 0.00 2.12
418 419 4.217550 GCTAGTCTGGCTCTGAAGGTATAG 59.782 50.000 0.04 0.00 0.00 1.31
419 420 4.145807 GCTAGTCTGGCTCTGAAGGTATA 58.854 47.826 0.04 0.00 0.00 1.47
420 421 2.962421 GCTAGTCTGGCTCTGAAGGTAT 59.038 50.000 0.04 0.00 0.00 2.73
421 422 2.291605 TGCTAGTCTGGCTCTGAAGGTA 60.292 50.000 9.82 0.00 0.00 3.08
422 423 1.190643 GCTAGTCTGGCTCTGAAGGT 58.809 55.000 0.04 0.00 0.00 3.50
423 424 1.134848 GTGCTAGTCTGGCTCTGAAGG 60.135 57.143 9.82 0.00 0.00 3.46
424 425 1.134848 GGTGCTAGTCTGGCTCTGAAG 60.135 57.143 9.82 0.00 0.00 3.02
425 426 0.898320 GGTGCTAGTCTGGCTCTGAA 59.102 55.000 9.82 0.00 0.00 3.02
426 427 0.251787 TGGTGCTAGTCTGGCTCTGA 60.252 55.000 9.82 0.00 0.00 3.27
427 428 0.108424 GTGGTGCTAGTCTGGCTCTG 60.108 60.000 9.82 0.00 0.00 3.35
428 429 0.252012 AGTGGTGCTAGTCTGGCTCT 60.252 55.000 9.82 0.74 0.00 4.09
429 430 0.610687 AAGTGGTGCTAGTCTGGCTC 59.389 55.000 9.82 5.74 0.00 4.70
430 431 1.827969 CTAAGTGGTGCTAGTCTGGCT 59.172 52.381 9.82 0.00 0.00 4.75
431 432 1.550976 ACTAAGTGGTGCTAGTCTGGC 59.449 52.381 0.32 0.32 0.00 4.85
432 433 3.258372 TCAACTAAGTGGTGCTAGTCTGG 59.742 47.826 0.00 0.00 32.28 3.86
433 434 4.521130 TCAACTAAGTGGTGCTAGTCTG 57.479 45.455 0.00 0.00 32.28 3.51
434 435 4.528596 ACATCAACTAAGTGGTGCTAGTCT 59.471 41.667 0.00 0.00 32.50 3.24
435 436 4.822026 ACATCAACTAAGTGGTGCTAGTC 58.178 43.478 0.00 0.00 32.50 2.59
436 437 4.891992 ACATCAACTAAGTGGTGCTAGT 57.108 40.909 0.00 0.00 32.50 2.57
437 438 7.334421 ACATTTACATCAACTAAGTGGTGCTAG 59.666 37.037 0.00 0.00 32.50 3.42
438 439 7.165485 ACATTTACATCAACTAAGTGGTGCTA 58.835 34.615 0.00 0.00 32.50 3.49
439 440 6.003950 ACATTTACATCAACTAAGTGGTGCT 58.996 36.000 0.00 0.00 32.50 4.40
440 441 6.254281 ACATTTACATCAACTAAGTGGTGC 57.746 37.500 0.00 0.00 32.50 5.01
441 442 9.773328 CATTACATTTACATCAACTAAGTGGTG 57.227 33.333 0.00 0.00 35.63 4.17
442 443 9.733556 TCATTACATTTACATCAACTAAGTGGT 57.266 29.630 0.00 0.00 0.00 4.16
469 470 9.559732 TCGGATTTCATATAAACATGACAGATT 57.440 29.630 0.00 0.00 34.69 2.40
470 471 8.993121 GTCGGATTTCATATAAACATGACAGAT 58.007 33.333 0.00 0.00 34.69 2.90
471 472 7.441157 GGTCGGATTTCATATAAACATGACAGA 59.559 37.037 0.00 0.00 34.69 3.41
472 473 7.569408 CGGTCGGATTTCATATAAACATGACAG 60.569 40.741 0.00 0.00 34.69 3.51
473 474 6.201997 CGGTCGGATTTCATATAAACATGACA 59.798 38.462 0.00 0.00 34.69 3.58
474 475 6.202188 ACGGTCGGATTTCATATAAACATGAC 59.798 38.462 0.00 0.00 34.69 3.06
475 476 6.201997 CACGGTCGGATTTCATATAAACATGA 59.798 38.462 0.00 0.00 33.10 3.07
476 477 6.018262 ACACGGTCGGATTTCATATAAACATG 60.018 38.462 0.00 0.00 0.00 3.21
477 478 6.053005 ACACGGTCGGATTTCATATAAACAT 58.947 36.000 0.00 0.00 0.00 2.71
478 479 5.421277 ACACGGTCGGATTTCATATAAACA 58.579 37.500 0.00 0.00 0.00 2.83
479 480 5.978934 ACACGGTCGGATTTCATATAAAC 57.021 39.130 0.00 0.00 0.00 2.01
480 481 6.675971 GCAAACACGGTCGGATTTCATATAAA 60.676 38.462 0.00 0.00 0.00 1.40
481 482 5.220700 GCAAACACGGTCGGATTTCATATAA 60.221 40.000 0.00 0.00 0.00 0.98
482 483 4.271533 GCAAACACGGTCGGATTTCATATA 59.728 41.667 0.00 0.00 0.00 0.86
483 484 3.064820 GCAAACACGGTCGGATTTCATAT 59.935 43.478 0.00 0.00 0.00 1.78
484 485 2.417239 GCAAACACGGTCGGATTTCATA 59.583 45.455 0.00 0.00 0.00 2.15
485 486 1.199097 GCAAACACGGTCGGATTTCAT 59.801 47.619 0.00 0.00 0.00 2.57
486 487 0.589223 GCAAACACGGTCGGATTTCA 59.411 50.000 0.00 0.00 0.00 2.69
487 488 0.589223 TGCAAACACGGTCGGATTTC 59.411 50.000 0.00 0.00 0.00 2.17
488 489 1.243902 ATGCAAACACGGTCGGATTT 58.756 45.000 0.00 0.00 0.00 2.17
489 490 2.102070 TATGCAAACACGGTCGGATT 57.898 45.000 0.00 0.00 0.00 3.01
490 491 2.102070 TTATGCAAACACGGTCGGAT 57.898 45.000 0.00 0.00 0.00 4.18
491 492 1.880271 TTTATGCAAACACGGTCGGA 58.120 45.000 0.00 0.00 0.00 4.55
492 493 2.911819 ATTTATGCAAACACGGTCGG 57.088 45.000 0.00 0.00 0.00 4.79
493 494 5.568747 AAAAATTTATGCAAACACGGTCG 57.431 34.783 0.00 0.00 0.00 4.79
494 495 7.462200 CGGATAAAAATTTATGCAAACACGGTC 60.462 37.037 14.92 0.00 40.26 4.79
495 496 6.309251 CGGATAAAAATTTATGCAAACACGGT 59.691 34.615 14.92 0.00 40.26 4.83
496 497 6.528423 TCGGATAAAAATTTATGCAAACACGG 59.472 34.615 14.92 1.11 40.26 4.94
497 498 7.272515 AGTCGGATAAAAATTTATGCAAACACG 59.727 33.333 14.92 0.00 40.26 4.49
498 499 8.372521 CAGTCGGATAAAAATTTATGCAAACAC 58.627 33.333 14.92 7.49 40.26 3.32
499 500 8.300286 TCAGTCGGATAAAAATTTATGCAAACA 58.700 29.630 14.92 0.07 40.26 2.83
500 501 8.682128 TCAGTCGGATAAAAATTTATGCAAAC 57.318 30.769 14.92 12.13 40.26 2.93
501 502 9.868277 AATCAGTCGGATAAAAATTTATGCAAA 57.132 25.926 14.92 3.06 40.26 3.68
502 503 9.515020 GAATCAGTCGGATAAAAATTTATGCAA 57.485 29.630 14.92 0.00 40.26 4.08
503 504 7.855409 CGAATCAGTCGGATAAAAATTTATGCA 59.145 33.333 14.92 0.00 46.45 3.96
504 505 8.204182 CGAATCAGTCGGATAAAAATTTATGC 57.796 34.615 3.25 5.41 46.45 3.14
520 521 3.305964 TCGACAACAGTTCGAATCAGTC 58.694 45.455 0.00 5.26 32.68 3.51
521 522 3.364889 TCGACAACAGTTCGAATCAGT 57.635 42.857 0.00 0.00 32.68 3.41
522 523 4.708868 TTTCGACAACAGTTCGAATCAG 57.291 40.909 10.21 0.00 43.81 2.90
523 524 4.509970 ACATTTCGACAACAGTTCGAATCA 59.490 37.500 10.21 0.00 43.81 2.57
524 525 5.018695 ACATTTCGACAACAGTTCGAATC 57.981 39.130 10.21 0.00 43.81 2.52
525 526 6.147164 ACATACATTTCGACAACAGTTCGAAT 59.853 34.615 10.21 0.51 43.81 3.34
526 527 5.464057 ACATACATTTCGACAACAGTTCGAA 59.536 36.000 6.06 6.06 42.92 3.71
527 528 4.986034 ACATACATTTCGACAACAGTTCGA 59.014 37.500 0.00 0.00 0.00 3.71
528 529 5.072823 CACATACATTTCGACAACAGTTCG 58.927 41.667 0.00 0.00 0.00 3.95
529 530 6.071463 GTCACATACATTTCGACAACAGTTC 58.929 40.000 0.00 0.00 0.00 3.01
530 531 5.758296 AGTCACATACATTTCGACAACAGTT 59.242 36.000 0.00 0.00 0.00 3.16
531 532 5.297547 AGTCACATACATTTCGACAACAGT 58.702 37.500 0.00 0.00 0.00 3.55
532 533 5.845985 AGTCACATACATTTCGACAACAG 57.154 39.130 0.00 0.00 0.00 3.16
533 534 6.217294 TGTAGTCACATACATTTCGACAACA 58.783 36.000 0.00 0.00 30.76 3.33
534 535 6.365247 ACTGTAGTCACATACATTTCGACAAC 59.635 38.462 0.00 0.00 35.21 3.32
535 536 6.452242 ACTGTAGTCACATACATTTCGACAA 58.548 36.000 0.00 0.00 35.21 3.18
536 537 6.020971 ACTGTAGTCACATACATTTCGACA 57.979 37.500 0.00 0.00 35.21 4.35
537 538 6.584942 TCAACTGTAGTCACATACATTTCGAC 59.415 38.462 0.00 0.00 35.21 4.20
538 539 6.683715 TCAACTGTAGTCACATACATTTCGA 58.316 36.000 0.00 0.00 35.21 3.71
539 540 6.944557 TCAACTGTAGTCACATACATTTCG 57.055 37.500 0.00 0.00 35.21 3.46
540 541 8.177663 CCATTCAACTGTAGTCACATACATTTC 58.822 37.037 0.00 0.00 35.21 2.17
541 542 7.362056 GCCATTCAACTGTAGTCACATACATTT 60.362 37.037 0.00 0.00 35.21 2.32
542 543 6.094048 GCCATTCAACTGTAGTCACATACATT 59.906 38.462 0.00 0.00 35.21 2.71
543 544 5.586243 GCCATTCAACTGTAGTCACATACAT 59.414 40.000 0.00 0.00 35.21 2.29
544 545 4.935205 GCCATTCAACTGTAGTCACATACA 59.065 41.667 0.00 0.00 33.14 2.29
545 546 5.063944 CAGCCATTCAACTGTAGTCACATAC 59.936 44.000 0.00 0.00 33.14 2.39
546 547 5.046663 TCAGCCATTCAACTGTAGTCACATA 60.047 40.000 0.00 0.00 35.37 2.29
547 548 4.005650 CAGCCATTCAACTGTAGTCACAT 58.994 43.478 0.00 0.00 33.14 3.21
548 549 3.070878 TCAGCCATTCAACTGTAGTCACA 59.929 43.478 0.00 0.00 35.37 3.58
549 550 3.433615 GTCAGCCATTCAACTGTAGTCAC 59.566 47.826 0.00 0.00 35.37 3.67
550 551 3.324846 AGTCAGCCATTCAACTGTAGTCA 59.675 43.478 0.00 0.00 35.37 3.41
551 552 3.929610 GAGTCAGCCATTCAACTGTAGTC 59.070 47.826 0.00 0.00 35.37 2.59
552 553 3.307059 GGAGTCAGCCATTCAACTGTAGT 60.307 47.826 0.00 0.00 35.37 2.73
553 554 3.265791 GGAGTCAGCCATTCAACTGTAG 58.734 50.000 0.00 0.00 35.37 2.74
554 555 2.027192 GGGAGTCAGCCATTCAACTGTA 60.027 50.000 0.00 0.00 35.37 2.74
555 556 1.271597 GGGAGTCAGCCATTCAACTGT 60.272 52.381 0.00 0.00 35.37 3.55
556 557 1.457346 GGGAGTCAGCCATTCAACTG 58.543 55.000 0.00 0.00 35.15 3.16
557 558 0.036010 CGGGAGTCAGCCATTCAACT 60.036 55.000 0.00 0.00 0.00 3.16
558 559 1.648467 GCGGGAGTCAGCCATTCAAC 61.648 60.000 0.00 0.00 0.00 3.18
559 560 1.377202 GCGGGAGTCAGCCATTCAA 60.377 57.895 0.00 0.00 0.00 2.69
560 561 1.913951 ATGCGGGAGTCAGCCATTCA 61.914 55.000 7.27 0.00 0.00 2.57
561 562 1.153086 ATGCGGGAGTCAGCCATTC 60.153 57.895 7.27 0.00 0.00 2.67
562 563 1.153086 GATGCGGGAGTCAGCCATT 60.153 57.895 7.27 0.00 0.00 3.16
563 564 2.507944 GATGCGGGAGTCAGCCAT 59.492 61.111 7.27 0.00 0.00 4.40
564 565 3.785859 GGATGCGGGAGTCAGCCA 61.786 66.667 7.27 0.00 40.48 4.75
565 566 4.899239 CGGATGCGGGAGTCAGCC 62.899 72.222 0.00 0.00 38.47 4.85
566 567 4.148825 ACGGATGCGGGAGTCAGC 62.149 66.667 12.44 3.22 0.00 4.26
567 568 2.202797 CACGGATGCGGGAGTCAG 60.203 66.667 12.44 0.00 0.00 3.51
568 569 2.994995 ACACGGATGCGGGAGTCA 60.995 61.111 18.37 0.00 0.00 3.41
569 570 1.381928 TAGACACGGATGCGGGAGTC 61.382 60.000 18.37 17.46 0.00 3.36
570 571 0.755698 ATAGACACGGATGCGGGAGT 60.756 55.000 18.37 8.76 0.00 3.85
571 572 0.319040 CATAGACACGGATGCGGGAG 60.319 60.000 18.37 5.04 0.00 4.30
572 573 1.739667 CATAGACACGGATGCGGGA 59.260 57.895 18.37 0.00 0.00 5.14
573 574 1.300931 CCATAGACACGGATGCGGG 60.301 63.158 7.56 7.56 0.00 6.13
574 575 0.597637 GTCCATAGACACGGATGCGG 60.598 60.000 12.44 2.33 42.99 5.69
575 576 0.385751 AGTCCATAGACACGGATGCG 59.614 55.000 4.58 4.58 46.15 4.73
576 577 1.539065 CCAGTCCATAGACACGGATGC 60.539 57.143 0.00 0.00 46.15 3.91
577 578 1.757118 ACCAGTCCATAGACACGGATG 59.243 52.381 6.74 0.00 46.15 3.51
578 579 2.032620 GACCAGTCCATAGACACGGAT 58.967 52.381 6.74 0.00 46.15 4.18
579 580 1.471119 GACCAGTCCATAGACACGGA 58.529 55.000 6.74 0.00 46.15 4.69
596 597 1.369625 CTGCATTAGTTCGTGGGGAC 58.630 55.000 0.00 0.00 0.00 4.46
597 598 0.251916 CCTGCATTAGTTCGTGGGGA 59.748 55.000 0.00 0.00 0.00 4.81
598 599 0.251916 TCCTGCATTAGTTCGTGGGG 59.748 55.000 0.00 0.00 0.00 4.96
599 600 1.207089 TCTCCTGCATTAGTTCGTGGG 59.793 52.381 0.00 0.00 0.00 4.61
600 601 2.672961 TCTCCTGCATTAGTTCGTGG 57.327 50.000 0.00 0.00 0.00 4.94
601 602 5.551760 ATTTTCTCCTGCATTAGTTCGTG 57.448 39.130 0.00 0.00 0.00 4.35
602 603 6.575162 AAATTTTCTCCTGCATTAGTTCGT 57.425 33.333 0.00 0.00 0.00 3.85
603 604 7.645340 CCATAAATTTTCTCCTGCATTAGTTCG 59.355 37.037 0.00 0.00 0.00 3.95
604 605 7.922811 CCCATAAATTTTCTCCTGCATTAGTTC 59.077 37.037 0.00 0.00 0.00 3.01
605 606 7.400052 ACCCATAAATTTTCTCCTGCATTAGTT 59.600 33.333 0.00 0.00 0.00 2.24
606 607 6.897413 ACCCATAAATTTTCTCCTGCATTAGT 59.103 34.615 0.00 0.00 0.00 2.24
607 608 7.352079 ACCCATAAATTTTCTCCTGCATTAG 57.648 36.000 0.00 0.00 0.00 1.73
608 609 7.555087 CAACCCATAAATTTTCTCCTGCATTA 58.445 34.615 0.00 0.00 0.00 1.90
609 610 6.408869 CAACCCATAAATTTTCTCCTGCATT 58.591 36.000 0.00 0.00 0.00 3.56
610 611 5.627503 GCAACCCATAAATTTTCTCCTGCAT 60.628 40.000 0.00 0.00 0.00 3.96
611 612 4.322650 GCAACCCATAAATTTTCTCCTGCA 60.323 41.667 0.00 0.00 0.00 4.41
612 613 4.081476 AGCAACCCATAAATTTTCTCCTGC 60.081 41.667 0.00 0.00 0.00 4.85
613 614 5.047092 ACAGCAACCCATAAATTTTCTCCTG 60.047 40.000 0.00 0.00 0.00 3.86
614 615 5.086621 ACAGCAACCCATAAATTTTCTCCT 58.913 37.500 0.00 0.00 0.00 3.69
615 616 5.405935 ACAGCAACCCATAAATTTTCTCC 57.594 39.130 0.00 0.00 0.00 3.71
616 617 5.639082 CCAACAGCAACCCATAAATTTTCTC 59.361 40.000 0.00 0.00 0.00 2.87
617 618 5.512921 CCCAACAGCAACCCATAAATTTTCT 60.513 40.000 0.00 0.00 0.00 2.52
618 619 4.694982 CCCAACAGCAACCCATAAATTTTC 59.305 41.667 0.00 0.00 0.00 2.29
619 620 4.349342 TCCCAACAGCAACCCATAAATTTT 59.651 37.500 0.00 0.00 0.00 1.82
620 621 3.906846 TCCCAACAGCAACCCATAAATTT 59.093 39.130 0.00 0.00 0.00 1.82
621 622 3.515562 TCCCAACAGCAACCCATAAATT 58.484 40.909 0.00 0.00 0.00 1.82
622 623 3.182887 TCCCAACAGCAACCCATAAAT 57.817 42.857 0.00 0.00 0.00 1.40
623 624 2.685106 TCCCAACAGCAACCCATAAA 57.315 45.000 0.00 0.00 0.00 1.40
624 625 2.455557 CATCCCAACAGCAACCCATAA 58.544 47.619 0.00 0.00 0.00 1.90
625 626 1.959508 GCATCCCAACAGCAACCCATA 60.960 52.381 0.00 0.00 0.00 2.74
626 627 1.259840 GCATCCCAACAGCAACCCAT 61.260 55.000 0.00 0.00 0.00 4.00
627 628 1.907807 GCATCCCAACAGCAACCCA 60.908 57.895 0.00 0.00 0.00 4.51
628 629 2.649129 GGCATCCCAACAGCAACCC 61.649 63.158 0.00 0.00 0.00 4.11
629 630 2.649129 GGGCATCCCAACAGCAACC 61.649 63.158 0.00 0.00 44.65 3.77
630 631 2.973082 GGGCATCCCAACAGCAAC 59.027 61.111 0.00 0.00 44.65 4.17
639 640 1.676006 CGTGTTGATTAAGGGCATCCC 59.324 52.381 0.00 0.00 45.90 3.85
640 641 1.065551 GCGTGTTGATTAAGGGCATCC 59.934 52.381 0.00 0.00 0.00 3.51
641 642 1.742831 TGCGTGTTGATTAAGGGCATC 59.257 47.619 0.00 0.00 0.00 3.91
642 643 1.745087 CTGCGTGTTGATTAAGGGCAT 59.255 47.619 0.00 0.00 0.00 4.40
643 644 1.164411 CTGCGTGTTGATTAAGGGCA 58.836 50.000 0.00 0.00 0.00 5.36
644 645 1.448985 TCTGCGTGTTGATTAAGGGC 58.551 50.000 0.00 0.00 0.00 5.19
645 646 6.650807 ACATATATCTGCGTGTTGATTAAGGG 59.349 38.462 0.00 0.00 0.00 3.95
646 647 7.658179 ACATATATCTGCGTGTTGATTAAGG 57.342 36.000 0.00 0.00 0.00 2.69
653 654 4.126437 TCCCAACATATATCTGCGTGTTG 58.874 43.478 9.45 9.45 46.66 3.33
654 655 4.141711 ACTCCCAACATATATCTGCGTGTT 60.142 41.667 0.00 0.00 35.34 3.32
655 656 3.388024 ACTCCCAACATATATCTGCGTGT 59.612 43.478 0.00 0.00 0.00 4.49
656 657 3.742882 CACTCCCAACATATATCTGCGTG 59.257 47.826 0.00 0.00 0.00 5.34
657 658 3.244215 CCACTCCCAACATATATCTGCGT 60.244 47.826 0.00 0.00 0.00 5.24
658 659 3.329386 CCACTCCCAACATATATCTGCG 58.671 50.000 0.00 0.00 0.00 5.18
659 660 3.077359 GCCACTCCCAACATATATCTGC 58.923 50.000 0.00 0.00 0.00 4.26
660 661 4.040829 TCAGCCACTCCCAACATATATCTG 59.959 45.833 0.00 0.00 0.00 2.90
661 662 4.234550 TCAGCCACTCCCAACATATATCT 58.765 43.478 0.00 0.00 0.00 1.98
662 663 4.623932 TCAGCCACTCCCAACATATATC 57.376 45.455 0.00 0.00 0.00 1.63
663 664 4.413520 ACTTCAGCCACTCCCAACATATAT 59.586 41.667 0.00 0.00 0.00 0.86
664 665 3.780294 ACTTCAGCCACTCCCAACATATA 59.220 43.478 0.00 0.00 0.00 0.86
665 666 2.578021 ACTTCAGCCACTCCCAACATAT 59.422 45.455 0.00 0.00 0.00 1.78
666 667 1.985159 ACTTCAGCCACTCCCAACATA 59.015 47.619 0.00 0.00 0.00 2.29
667 668 0.773644 ACTTCAGCCACTCCCAACAT 59.226 50.000 0.00 0.00 0.00 2.71
668 669 0.550914 AACTTCAGCCACTCCCAACA 59.449 50.000 0.00 0.00 0.00 3.33
669 670 2.561478 TAACTTCAGCCACTCCCAAC 57.439 50.000 0.00 0.00 0.00 3.77
670 671 3.585289 TGTATAACTTCAGCCACTCCCAA 59.415 43.478 0.00 0.00 0.00 4.12
671 672 3.178046 TGTATAACTTCAGCCACTCCCA 58.822 45.455 0.00 0.00 0.00 4.37
672 673 3.197983 ACTGTATAACTTCAGCCACTCCC 59.802 47.826 0.00 0.00 35.37 4.30
673 674 4.473477 ACTGTATAACTTCAGCCACTCC 57.527 45.455 0.00 0.00 35.37 3.85
674 675 6.204882 ACAAAACTGTATAACTTCAGCCACTC 59.795 38.462 0.00 0.00 35.37 3.51
675 676 6.062095 ACAAAACTGTATAACTTCAGCCACT 58.938 36.000 0.00 0.00 35.37 4.00
676 677 6.313744 ACAAAACTGTATAACTTCAGCCAC 57.686 37.500 0.00 0.00 35.37 5.01
677 678 5.472137 GGACAAAACTGTATAACTTCAGCCA 59.528 40.000 0.00 0.00 35.37 4.75
678 679 5.106277 GGGACAAAACTGTATAACTTCAGCC 60.106 44.000 0.00 0.00 35.37 4.85
679 680 5.705905 AGGGACAAAACTGTATAACTTCAGC 59.294 40.000 0.00 0.00 35.37 4.26
680 681 6.934645 TCAGGGACAAAACTGTATAACTTCAG 59.065 38.462 0.00 0.00 36.17 3.02
681 682 6.833041 TCAGGGACAAAACTGTATAACTTCA 58.167 36.000 0.00 0.00 36.17 3.02
682 683 7.660208 TCTTCAGGGACAAAACTGTATAACTTC 59.340 37.037 0.00 0.00 36.17 3.01
683 684 7.514721 TCTTCAGGGACAAAACTGTATAACTT 58.485 34.615 0.00 0.00 36.17 2.66
684 685 7.074653 TCTTCAGGGACAAAACTGTATAACT 57.925 36.000 0.00 0.00 36.17 2.24
685 686 7.626452 GCATCTTCAGGGACAAAACTGTATAAC 60.626 40.741 0.00 0.00 36.17 1.89
686 687 6.374333 GCATCTTCAGGGACAAAACTGTATAA 59.626 38.462 0.00 0.00 36.17 0.98
687 688 5.880332 GCATCTTCAGGGACAAAACTGTATA 59.120 40.000 0.00 0.00 36.17 1.47
688 689 4.702131 GCATCTTCAGGGACAAAACTGTAT 59.298 41.667 0.00 0.00 36.17 2.29
689 690 4.072131 GCATCTTCAGGGACAAAACTGTA 58.928 43.478 0.00 0.00 36.17 2.74
690 691 2.887152 GCATCTTCAGGGACAAAACTGT 59.113 45.455 0.00 0.00 36.17 3.55
691 692 2.229784 GGCATCTTCAGGGACAAAACTG 59.770 50.000 0.00 0.00 36.07 3.16
692 693 2.158475 TGGCATCTTCAGGGACAAAACT 60.158 45.455 0.00 0.00 0.00 2.66
693 694 2.238521 TGGCATCTTCAGGGACAAAAC 58.761 47.619 0.00 0.00 0.00 2.43
694 695 2.673775 TGGCATCTTCAGGGACAAAA 57.326 45.000 0.00 0.00 0.00 2.44
695 696 2.905415 ATGGCATCTTCAGGGACAAA 57.095 45.000 0.00 0.00 0.00 2.83
696 697 3.266772 ACTTATGGCATCTTCAGGGACAA 59.733 43.478 1.65 0.00 0.00 3.18
697 698 2.846206 ACTTATGGCATCTTCAGGGACA 59.154 45.455 1.65 0.00 0.00 4.02
698 699 3.209410 CACTTATGGCATCTTCAGGGAC 58.791 50.000 1.65 0.00 0.00 4.46
699 700 2.421952 GCACTTATGGCATCTTCAGGGA 60.422 50.000 1.65 0.00 0.00 4.20
700 701 1.952296 GCACTTATGGCATCTTCAGGG 59.048 52.381 1.65 0.00 0.00 4.45
701 702 2.646930 TGCACTTATGGCATCTTCAGG 58.353 47.619 1.65 0.00 36.11 3.86
702 703 4.913335 ATTGCACTTATGGCATCTTCAG 57.087 40.909 1.65 0.00 41.58 3.02
703 704 5.297527 CAGTATTGCACTTATGGCATCTTCA 59.702 40.000 1.65 0.00 41.58 3.02
704 705 5.297776 ACAGTATTGCACTTATGGCATCTTC 59.702 40.000 1.65 0.00 41.58 2.87
705 706 5.066893 CACAGTATTGCACTTATGGCATCTT 59.933 40.000 1.65 0.00 41.58 2.40
706 707 4.577693 CACAGTATTGCACTTATGGCATCT 59.422 41.667 1.65 0.00 41.58 2.90
707 708 4.576053 TCACAGTATTGCACTTATGGCATC 59.424 41.667 1.65 0.00 41.58 3.91
708 709 4.525996 TCACAGTATTGCACTTATGGCAT 58.474 39.130 4.88 4.88 41.58 4.40
709 710 3.940852 CTCACAGTATTGCACTTATGGCA 59.059 43.478 0.00 0.00 40.00 4.92
710 711 3.941483 ACTCACAGTATTGCACTTATGGC 59.059 43.478 0.00 0.00 34.26 4.40
711 712 4.572389 GGACTCACAGTATTGCACTTATGG 59.428 45.833 0.00 0.00 34.26 2.74
712 713 5.178061 TGGACTCACAGTATTGCACTTATG 58.822 41.667 0.00 0.00 34.26 1.90
713 714 5.420725 TGGACTCACAGTATTGCACTTAT 57.579 39.130 0.00 0.00 34.26 1.73
714 715 4.882842 TGGACTCACAGTATTGCACTTA 57.117 40.909 0.00 0.00 34.26 2.24
715 716 3.769739 TGGACTCACAGTATTGCACTT 57.230 42.857 0.00 0.00 34.26 3.16
716 717 3.988976 ATGGACTCACAGTATTGCACT 57.011 42.857 0.00 0.00 38.32 4.40
717 718 4.455533 TGAAATGGACTCACAGTATTGCAC 59.544 41.667 0.00 0.00 0.00 4.57
718 719 4.650734 TGAAATGGACTCACAGTATTGCA 58.349 39.130 0.00 0.00 0.00 4.08
719 720 5.412594 TCTTGAAATGGACTCACAGTATTGC 59.587 40.000 0.00 0.00 0.00 3.56
720 721 6.875726 TCTCTTGAAATGGACTCACAGTATTG 59.124 38.462 0.00 0.00 0.00 1.90
721 722 7.009179 TCTCTTGAAATGGACTCACAGTATT 57.991 36.000 0.00 0.00 0.00 1.89
722 723 6.611613 TCTCTTGAAATGGACTCACAGTAT 57.388 37.500 0.00 0.00 0.00 2.12
723 724 6.419484 TTCTCTTGAAATGGACTCACAGTA 57.581 37.500 0.00 0.00 0.00 2.74
724 725 4.963318 TCTCTTGAAATGGACTCACAGT 57.037 40.909 0.00 0.00 0.00 3.55
880 889 8.786826 TCCTGACAAATAAACTAATGTCGATT 57.213 30.769 0.00 0.00 43.91 3.34
1155 1183 1.980232 ACCGGACATGTCACGGCTA 60.980 57.895 35.58 0.00 42.87 3.93
1323 1351 1.321074 CGTGGAGGAGGTGGTAGGAC 61.321 65.000 0.00 0.00 0.00 3.85
1362 1390 0.388134 TGAGAAAGAGCGCGTGGTAC 60.388 55.000 8.43 0.00 0.00 3.34
1377 1405 2.119611 TTGGAGCCGAGGGTGAGA 59.880 61.111 0.00 0.00 0.00 3.27
1498 1526 3.412408 GGTGGGGAAGGAGAGGGC 61.412 72.222 0.00 0.00 0.00 5.19
2052 2143 4.103103 TCGCTCGTGTCCAGCTCG 62.103 66.667 0.00 0.00 34.45 5.03
2301 2440 6.378564 CAGGTCAAGGAGTAGAAATGAGAGTA 59.621 42.308 0.00 0.00 0.00 2.59
2320 2459 0.770499 TGTCATTTCCCTGCAGGTCA 59.230 50.000 30.63 14.71 36.75 4.02
2321 2460 1.168714 GTGTCATTTCCCTGCAGGTC 58.831 55.000 30.63 12.06 36.75 3.85
2322 2461 0.251341 GGTGTCATTTCCCTGCAGGT 60.251 55.000 30.63 10.11 36.75 4.00
2323 2462 0.967380 GGGTGTCATTTCCCTGCAGG 60.967 60.000 26.87 26.87 40.48 4.85
2325 2464 4.841441 GGGTGTCATTTCCCTGCA 57.159 55.556 0.00 0.00 40.48 4.41
2347 2487 3.916172 CAGCAAAGACATTTTCGATGGTG 59.084 43.478 0.00 0.00 37.07 4.17
2422 2562 4.436242 TGACTGTCAGAATCTACGGAAC 57.564 45.455 6.36 2.28 0.00 3.62
2486 2626 7.816031 TCGGTTGATAAAGTAAAGGAACTACTG 59.184 37.037 0.00 0.00 38.49 2.74
2530 2670 8.614346 GCCATCACGTTATAAAATGTAACCTTA 58.386 33.333 0.00 0.00 32.96 2.69
2534 2674 9.037737 TCTAGCCATCACGTTATAAAATGTAAC 57.962 33.333 0.00 0.00 32.96 2.50
2548 2688 3.823873 AGAATCTAGGTCTAGCCATCACG 59.176 47.826 6.07 0.00 40.61 4.35
2550 2690 6.794534 TCATAGAATCTAGGTCTAGCCATCA 58.205 40.000 1.72 0.00 40.61 3.07
2631 2771 9.762933 ACACAGAAGCAAATTTAACATTGTTAT 57.237 25.926 9.95 0.00 0.00 1.89
2878 3023 3.056328 GTTCGCCTTGGCCTCCAC 61.056 66.667 3.32 0.00 30.78 4.02
3446 3651 1.679139 CAAAGTCTGTTCCAGCACCA 58.321 50.000 0.00 0.00 0.00 4.17
3784 3996 8.099364 TGAATTTGAAAAGATAGCTCTCGTTT 57.901 30.769 11.74 11.74 30.97 3.60
3824 4036 3.314541 AGTCGGCGATATAATGGAACC 57.685 47.619 14.79 0.00 0.00 3.62
3949 4161 1.757699 AGAAGATACCTCCAGTTCGGC 59.242 52.381 0.00 0.00 33.14 5.54
4043 4263 9.056005 GGCAAGACTACATCATGATTATGTTTA 57.944 33.333 5.16 0.00 38.49 2.01
4049 4269 8.049117 AGAAAAGGCAAGACTACATCATGATTA 58.951 33.333 5.16 1.84 0.00 1.75
4137 4382 4.522405 TCCATGTGTCAAGTAATTGTTGGG 59.478 41.667 2.43 0.00 0.00 4.12
4321 4566 1.268079 GGTGAAAGCTGCTTTCCAGTC 59.732 52.381 37.92 27.47 46.36 3.51
4623 4944 5.792962 TCATCGCACATTATTCGTCAAAAAC 59.207 36.000 0.00 0.00 0.00 2.43
4739 5066 0.597637 CCGACGTGTTGAGCTTCTGT 60.598 55.000 0.00 0.00 0.00 3.41
4835 5162 0.546122 TCCGGCATCATGTTAGCCTT 59.454 50.000 18.59 0.00 46.14 4.35
4875 5204 1.153353 CGGTAAATTCCGTGCTGTGT 58.847 50.000 0.00 0.00 44.77 3.72
4876 5205 3.967734 CGGTAAATTCCGTGCTGTG 57.032 52.632 0.00 0.00 44.77 3.66
4912 5241 4.039609 CCAAGTGCTGATTCTTTTTCCCTT 59.960 41.667 0.00 0.00 0.00 3.95
4928 5257 4.604976 GTCAATCATTATGAGCCAAGTGC 58.395 43.478 0.29 0.00 41.71 4.40
4978 5308 4.966366 GCGAAAATTATTGCTGCTACTCTG 59.034 41.667 0.00 0.00 0.00 3.35
5011 5341 2.892784 ACTTATTGGCGCTACTCTCC 57.107 50.000 7.64 0.00 0.00 3.71
5143 5473 2.999355 GCGGAATCAGGATCTCTAATGC 59.001 50.000 0.00 0.00 0.00 3.56
5203 5533 5.957842 TCACGCAGAAAAACCATAAATCT 57.042 34.783 0.00 0.00 0.00 2.40
5209 5539 3.057315 CCAGATTCACGCAGAAAAACCAT 60.057 43.478 0.00 0.00 40.22 3.55
5212 5542 2.287547 TGCCAGATTCACGCAGAAAAAC 60.288 45.455 0.00 0.00 40.22 2.43
5422 5767 9.561069 GAAATCGCACTTATATGGGGATATTAT 57.439 33.333 0.00 0.00 34.32 1.28
5423 5768 8.768397 AGAAATCGCACTTATATGGGGATATTA 58.232 33.333 0.00 0.00 34.32 0.98
5424 5769 7.633789 AGAAATCGCACTTATATGGGGATATT 58.366 34.615 0.00 0.00 34.32 1.28
5438 5783 3.192844 TCCTTCGTCTAAGAAATCGCACT 59.807 43.478 0.00 0.00 37.38 4.40
5505 5851 3.985877 GCATACTGCAGTGCCACA 58.014 55.556 29.57 9.38 44.26 4.17
5523 5869 2.413837 GGAGACTTTACATGTGTGCGT 58.586 47.619 9.11 0.00 0.00 5.24
5525 5871 1.128692 GCGGAGACTTTACATGTGTGC 59.871 52.381 9.11 0.00 0.00 4.57
5526 5872 2.412870 TGCGGAGACTTTACATGTGTG 58.587 47.619 9.11 0.70 0.00 3.82
5564 5910 6.652481 GTGCCTATAATACACTTGATGAGCAT 59.348 38.462 0.00 0.00 0.00 3.79
5588 5934 2.575694 TTGAAACATTGCGCACTTGT 57.424 40.000 11.12 15.00 0.00 3.16
5589 5935 3.921969 TTTTGAAACATTGCGCACTTG 57.078 38.095 11.12 14.24 0.00 3.16
5590 5936 4.332268 ACAATTTTGAAACATTGCGCACTT 59.668 33.333 11.12 0.33 34.26 3.16
5591 5937 3.870419 ACAATTTTGAAACATTGCGCACT 59.130 34.783 11.12 0.00 34.26 4.40
5592 5938 4.194381 ACAATTTTGAAACATTGCGCAC 57.806 36.364 11.12 0.00 34.26 5.34
5595 5941 6.904011 TGCTTTTACAATTTTGAAACATTGCG 59.096 30.769 10.55 0.00 34.26 4.85
5596 5942 7.695618 TGTGCTTTTACAATTTTGAAACATTGC 59.304 29.630 10.55 0.00 34.26 3.56
5597 5943 9.552114 TTGTGCTTTTACAATTTTGAAACATTG 57.448 25.926 0.00 9.61 35.75 2.82
5598 5944 9.553418 GTTGTGCTTTTACAATTTTGAAACATT 57.447 25.926 0.00 0.00 42.02 2.71
5600 5946 7.173218 TGGTTGTGCTTTTACAATTTTGAAACA 59.827 29.630 0.00 0.00 42.02 2.83
5601 5947 7.522374 TGGTTGTGCTTTTACAATTTTGAAAC 58.478 30.769 0.00 0.00 42.02 2.78
5602 5948 7.672983 TGGTTGTGCTTTTACAATTTTGAAA 57.327 28.000 0.00 0.00 42.02 2.69
5603 5949 7.856145 ATGGTTGTGCTTTTACAATTTTGAA 57.144 28.000 0.00 0.00 42.02 2.69
5604 5950 7.201679 CCAATGGTTGTGCTTTTACAATTTTGA 60.202 33.333 0.00 0.00 42.02 2.69
5605 5951 6.911511 CCAATGGTTGTGCTTTTACAATTTTG 59.088 34.615 0.00 0.00 42.02 2.44
5620 7233 0.825840 CCACCCGAACCAATGGTTGT 60.826 55.000 23.90 11.57 46.95 3.32
5621 7234 0.538516 TCCACCCGAACCAATGGTTG 60.539 55.000 23.90 14.06 46.95 3.77
5623 7236 1.378762 CTCCACCCGAACCAATGGT 59.621 57.895 0.00 0.00 37.65 3.55
5624 7237 2.046285 GCTCCACCCGAACCAATGG 61.046 63.158 0.00 0.00 0.00 3.16
5625 7238 0.251916 TAGCTCCACCCGAACCAATG 59.748 55.000 0.00 0.00 0.00 2.82
5626 7239 1.141053 GATAGCTCCACCCGAACCAAT 59.859 52.381 0.00 0.00 0.00 3.16
5627 7240 0.539986 GATAGCTCCACCCGAACCAA 59.460 55.000 0.00 0.00 0.00 3.67
5628 7241 1.335132 GGATAGCTCCACCCGAACCA 61.335 60.000 0.00 0.00 41.64 3.67
5629 7242 1.446366 GGATAGCTCCACCCGAACC 59.554 63.158 0.00 0.00 41.64 3.62
5630 7243 1.335132 TGGGATAGCTCCACCCGAAC 61.335 60.000 15.03 0.00 45.91 3.95
5631 7244 1.002403 TGGGATAGCTCCACCCGAA 59.998 57.895 15.03 0.23 45.91 4.30
5632 7245 1.760875 GTGGGATAGCTCCACCCGA 60.761 63.158 11.21 2.48 46.58 5.14
5633 7246 2.822399 GTGGGATAGCTCCACCCG 59.178 66.667 11.21 0.00 46.58 5.28
5637 7250 2.551270 ACTTCAAGTGGGATAGCTCCA 58.449 47.619 0.00 0.00 44.08 3.86
5638 7251 4.755266 TTACTTCAAGTGGGATAGCTCC 57.245 45.455 0.00 0.00 41.26 4.70
5639 7252 5.351740 GTGTTTACTTCAAGTGGGATAGCTC 59.648 44.000 0.00 0.00 0.00 4.09
5640 7253 5.246307 GTGTTTACTTCAAGTGGGATAGCT 58.754 41.667 0.00 0.00 0.00 3.32
5641 7254 4.092968 CGTGTTTACTTCAAGTGGGATAGC 59.907 45.833 0.00 0.00 0.00 2.97
5642 7255 5.235516 ACGTGTTTACTTCAAGTGGGATAG 58.764 41.667 0.00 0.00 0.00 2.08
5643 7256 5.217978 ACGTGTTTACTTCAAGTGGGATA 57.782 39.130 0.00 0.00 0.00 2.59
5644 7257 4.062991 GACGTGTTTACTTCAAGTGGGAT 58.937 43.478 0.00 0.00 0.00 3.85
5662 7275 2.465860 TTGATCATTTGTCCGGACGT 57.534 45.000 28.70 15.03 0.00 4.34
5665 7278 3.455910 AGAGGATTGATCATTTGTCCGGA 59.544 43.478 0.00 0.00 34.19 5.14
5688 7301 1.460743 TGCAGTCGCTTTGATTCTTCG 59.539 47.619 0.00 0.00 39.64 3.79
5713 7326 4.098960 CCAAGCCTGTAAATCATCTTGCAT 59.901 41.667 0.00 0.00 36.32 3.96
5721 7334 2.161855 CAGTGCCAAGCCTGTAAATCA 58.838 47.619 0.00 0.00 0.00 2.57
5725 7338 1.002430 CTCTCAGTGCCAAGCCTGTAA 59.998 52.381 5.41 0.00 31.92 2.41
5728 7341 2.039405 GCTCTCAGTGCCAAGCCTG 61.039 63.158 0.00 0.00 0.00 4.85
5733 7346 1.290324 GTCTCGCTCTCAGTGCCAA 59.710 57.895 0.00 0.00 0.00 4.52
5745 7358 1.444553 CAGTTCCTGGTCGTCTCGC 60.445 63.158 0.00 0.00 0.00 5.03
5746 7359 0.109689 GTCAGTTCCTGGTCGTCTCG 60.110 60.000 0.00 0.00 31.51 4.04
5821 7467 3.029735 GCTTTGGCAACCAACGCG 61.030 61.111 11.43 3.53 45.88 6.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.