Multiple sequence alignment - TraesCS3B01G310800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G310800 chr3B 100.000 6709 0 0 1 6709 499350702 499357410 0.000000e+00 12390.0
1 TraesCS3B01G310800 chr3B 92.308 195 11 1 77 271 647527848 647527658 2.380000e-69 274.0
2 TraesCS3B01G310800 chr3B 93.000 100 6 1 270 368 647527415 647527316 1.950000e-30 145.0
3 TraesCS3B01G310800 chr3B 100.000 33 0 0 4758 4790 499355427 499355459 2.020000e-05 62.1
4 TraesCS3B01G310800 chr3B 100.000 33 0 0 4726 4758 499355459 499355491 2.020000e-05 62.1
5 TraesCS3B01G310800 chr3A 94.523 2556 92 17 2245 4757 506666974 506669524 0.000000e+00 3901.0
6 TraesCS3B01G310800 chr3A 93.994 1848 75 14 4758 6596 506669493 506671313 0.000000e+00 2765.0
7 TraesCS3B01G310800 chr3A 94.040 1208 41 7 763 1942 506665485 506666689 0.000000e+00 1803.0
8 TraesCS3B01G310800 chr3A 95.149 268 13 0 1992 2259 506666690 506666957 2.240000e-114 424.0
9 TraesCS3B01G310800 chr3A 93.939 198 7 1 76 273 176136032 176136224 1.830000e-75 294.0
10 TraesCS3B01G310800 chr3A 96.825 63 1 1 6592 6653 506671343 506671405 3.310000e-18 104.0
11 TraesCS3B01G310800 chr3D 94.629 2402 86 20 2391 4758 384001175 384003567 0.000000e+00 3681.0
12 TraesCS3B01G310800 chr3D 94.426 1848 80 12 4758 6596 384003535 384005368 0.000000e+00 2820.0
13 TraesCS3B01G310800 chr3D 93.580 1215 44 9 830 2013 383996010 383997221 0.000000e+00 1781.0
14 TraesCS3B01G310800 chr3D 86.000 400 35 9 2011 2405 383997641 383998024 6.260000e-110 409.0
15 TraesCS3B01G310800 chr3D 88.136 295 11 4 76 368 153511730 153511458 5.020000e-86 329.0
16 TraesCS3B01G310800 chr3D 95.775 71 2 1 6592 6661 384005398 384005468 5.500000e-21 113.0
17 TraesCS3B01G310800 chr6B 95.000 260 13 0 441 700 559498735 559498994 6.260000e-110 409.0
18 TraesCS3B01G310800 chr6B 82.301 226 37 3 475 698 29808055 29808279 6.870000e-45 193.0
19 TraesCS3B01G310800 chr6B 90.909 110 6 3 232 341 275291711 275291816 1.950000e-30 145.0
20 TraesCS3B01G310800 chr6B 97.778 45 1 0 398 442 559498569 559498613 2.010000e-10 78.7
21 TraesCS3B01G310800 chr1B 92.453 265 16 3 441 701 325983633 325983369 6.350000e-100 375.0
22 TraesCS3B01G310800 chr1B 97.778 45 1 0 398 442 325983799 325983755 2.010000e-10 78.7
23 TraesCS3B01G310800 chr4A 91.386 267 14 6 77 342 594052141 594052399 2.300000e-94 357.0
24 TraesCS3B01G310800 chr4A 100.000 28 0 0 632 659 617626470 617626497 1.200000e-02 52.8
25 TraesCS3B01G310800 chr7D 95.477 199 5 4 147 343 477932819 477932623 1.400000e-81 315.0
26 TraesCS3B01G310800 chr7B 85.446 213 25 5 132 342 468292051 468292259 4.070000e-52 217.0
27 TraesCS3B01G310800 chr7B 82.379 227 35 5 476 700 715225707 715225484 6.870000e-45 193.0
28 TraesCS3B01G310800 chr7A 83.761 234 30 5 441 666 717608590 717608823 1.470000e-51 215.0
29 TraesCS3B01G310800 chr6A 80.969 289 38 11 60 345 531300749 531300475 5.270000e-51 213.0
30 TraesCS3B01G310800 chr2A 78.022 273 46 9 77 343 138533970 138533706 6.960000e-35 159.0
31 TraesCS3B01G310800 chr2A 94.203 69 3 1 1 68 726117770 726117838 3.310000e-18 104.0
32 TraesCS3B01G310800 chr2B 77.778 279 40 15 74 343 572104086 572103821 1.170000e-32 152.0
33 TraesCS3B01G310800 chr4B 95.588 68 2 1 1 68 115081079 115081013 2.560000e-19 108.0
34 TraesCS3B01G310800 chr4B 92.537 67 4 1 1 67 642460767 642460702 1.990000e-15 95.3
35 TraesCS3B01G310800 chr5B 96.774 62 1 1 698 758 702463482 702463421 1.190000e-17 102.0
36 TraesCS3B01G310800 chr5B 88.506 87 2 2 1 81 702463564 702463480 1.540000e-16 99.0
37 TraesCS3B01G310800 chr5A 94.872 39 1 1 28 65 649820668 649820706 7.270000e-05 60.2
38 TraesCS3B01G310800 chr5D 100.000 28 0 0 632 659 313468880 313468853 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G310800 chr3B 499350702 499357410 6708 False 4171.4 12390 100.0000 1 6709 3 chr3B.!!$F1 6708
1 TraesCS3B01G310800 chr3B 647527316 647527848 532 True 209.5 274 92.6540 77 368 2 chr3B.!!$R1 291
2 TraesCS3B01G310800 chr3A 506665485 506671405 5920 False 1799.4 3901 94.9062 763 6653 5 chr3A.!!$F2 5890
3 TraesCS3B01G310800 chr3D 383996010 384005468 9458 False 1760.8 3681 92.8820 830 6661 5 chr3D.!!$F1 5831

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
793 1039 0.029300 CATTACGGGCCATTTCGCAG 59.971 55.000 4.39 0.0 0.00 5.18 F
1307 1563 0.104620 ACCACCTACACTGTCCCCTT 60.105 55.000 0.00 0.0 0.00 3.95 F
1311 1567 1.153823 CTACACTGTCCCCTTCGCG 60.154 63.158 0.00 0.0 0.00 5.87 F
1779 2056 1.412343 TGCGAACAGAGGCTGCATATA 59.588 47.619 0.50 0.0 34.37 0.86 F
2045 2744 2.420022 GACGTTTTCAGCCAGCATATGT 59.580 45.455 4.29 0.0 0.00 2.29 F
3401 7333 0.604578 TGTTAACCCGAGGGACTTCG 59.395 55.000 16.26 0.0 41.55 3.79 F
4958 8912 0.036388 CGGCTGGCTCTGGTTTAAGA 60.036 55.000 0.00 0.0 0.00 2.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1989 2266 2.095768 ACAATTCAAGGTCAACATCGCG 60.096 45.455 0.00 0.0 0.00 5.87 R
3141 7073 1.982958 TCCCCACTACCCTTTCTTGAC 59.017 52.381 0.00 0.0 0.00 3.18 R
3242 7174 6.882140 ACGATATGAACTTTGTGAAACCCATA 59.118 34.615 0.00 0.0 34.36 2.74 R
3363 7295 0.898320 ACGACTCCATCAGGGACTTG 59.102 55.000 0.00 0.0 42.15 3.16 R
3719 7652 1.945394 ACGTCTACTACCATACCTGCG 59.055 52.381 0.00 0.0 0.00 5.18 R
5338 9296 0.391528 CCACACATGCTGGATCGTGA 60.392 55.000 14.80 0.0 33.56 4.35 R
6682 10681 0.466124 GTCAGGCCTATGACCCTGTC 59.534 60.000 3.98 0.0 46.83 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.849322 AGGGAATCCTTCTAACTAATCTCTC 57.151 40.000 0.00 0.00 41.56 3.20
25 26 7.601017 AGGGAATCCTTCTAACTAATCTCTCT 58.399 38.462 0.00 0.00 41.56 3.10
26 27 7.508977 AGGGAATCCTTCTAACTAATCTCTCTG 59.491 40.741 0.00 0.00 41.56 3.35
27 28 7.151976 GGAATCCTTCTAACTAATCTCTCTGC 58.848 42.308 0.00 0.00 0.00 4.26
28 29 6.664428 ATCCTTCTAACTAATCTCTCTGCC 57.336 41.667 0.00 0.00 0.00 4.85
29 30 4.896482 TCCTTCTAACTAATCTCTCTGCCC 59.104 45.833 0.00 0.00 0.00 5.36
30 31 4.039852 CCTTCTAACTAATCTCTCTGCCCC 59.960 50.000 0.00 0.00 0.00 5.80
31 32 3.577919 TCTAACTAATCTCTCTGCCCCC 58.422 50.000 0.00 0.00 0.00 5.40
50 51 2.309136 CCTTGATTTTCAGGGGGTGT 57.691 50.000 0.00 0.00 39.69 4.16
51 52 1.895131 CCTTGATTTTCAGGGGGTGTG 59.105 52.381 0.00 0.00 39.69 3.82
52 53 1.895131 CTTGATTTTCAGGGGGTGTGG 59.105 52.381 0.00 0.00 0.00 4.17
53 54 0.114168 TGATTTTCAGGGGGTGTGGG 59.886 55.000 0.00 0.00 0.00 4.61
54 55 1.229177 ATTTTCAGGGGGTGTGGGC 60.229 57.895 0.00 0.00 0.00 5.36
55 56 2.746947 ATTTTCAGGGGGTGTGGGCC 62.747 60.000 0.00 0.00 0.00 5.80
62 63 4.048470 GGGTGTGGGCCCTTCCTC 62.048 72.222 25.70 11.43 45.22 3.71
63 64 4.048470 GGTGTGGGCCCTTCCTCC 62.048 72.222 25.70 16.57 34.39 4.30
64 65 4.048470 GTGTGGGCCCTTCCTCCC 62.048 72.222 25.70 2.40 42.93 4.30
95 96 1.551883 TCCTTAGGCCTCGTTTGGTAC 59.448 52.381 9.68 0.00 0.00 3.34
159 160 2.622962 CCCAGAACCCGCGGAAAAC 61.623 63.158 30.73 14.85 0.00 2.43
179 180 1.227556 CCGAGGGCCCGTTTGATAG 60.228 63.158 18.44 0.00 0.00 2.08
230 231 1.597461 CCCTTCGACCCACTTCCTC 59.403 63.158 0.00 0.00 0.00 3.71
234 235 1.477685 TTCGACCCACTTCCTCCCAC 61.478 60.000 0.00 0.00 0.00 4.61
254 255 1.153745 CGCTTCAGAACCCTCGAGG 60.154 63.158 25.36 25.36 43.78 4.63
257 258 2.245438 CTTCAGAACCCTCGAGGCCC 62.245 65.000 26.87 15.90 40.58 5.80
277 522 1.517832 CCTCGAGGATTTGGTCGCT 59.482 57.895 28.21 0.00 37.39 4.93
368 614 2.842256 GCGATCTCCTCCGGCGTAA 61.842 63.158 6.01 0.00 0.00 3.18
369 615 1.283181 CGATCTCCTCCGGCGTAAG 59.717 63.158 6.01 2.51 43.44 2.34
370 616 1.445716 CGATCTCCTCCGGCGTAAGT 61.446 60.000 6.01 0.00 41.68 2.24
371 617 0.311477 GATCTCCTCCGGCGTAAGTC 59.689 60.000 6.01 0.00 41.68 3.01
379 625 3.236137 GGCGTAAGTCGTCGTCGC 61.236 66.667 0.00 0.00 44.95 5.19
380 626 3.236137 GCGTAAGTCGTCGTCGCC 61.236 66.667 0.00 0.00 40.83 5.54
381 627 2.575262 CGTAAGTCGTCGTCGCCC 60.575 66.667 0.00 0.00 36.96 6.13
382 628 2.202531 GTAAGTCGTCGTCGCCCC 60.203 66.667 0.00 0.00 36.96 5.80
383 629 2.360350 TAAGTCGTCGTCGCCCCT 60.360 61.111 0.00 0.00 36.96 4.79
384 630 2.401766 TAAGTCGTCGTCGCCCCTC 61.402 63.158 0.00 0.00 36.96 4.30
402 648 4.371231 CCCTCCCCTCCCCCAAGT 62.371 72.222 0.00 0.00 0.00 3.16
403 649 2.692741 CCTCCCCTCCCCCAAGTC 60.693 72.222 0.00 0.00 0.00 3.01
404 650 2.124996 CTCCCCTCCCCCAAGTCA 59.875 66.667 0.00 0.00 0.00 3.41
405 651 1.308216 CTCCCCTCCCCCAAGTCAT 60.308 63.158 0.00 0.00 0.00 3.06
406 652 1.619363 TCCCCTCCCCCAAGTCATG 60.619 63.158 0.00 0.00 0.00 3.07
407 653 2.276740 CCCTCCCCCAAGTCATGC 59.723 66.667 0.00 0.00 0.00 4.06
408 654 2.311854 CCCTCCCCCAAGTCATGCT 61.312 63.158 0.00 0.00 0.00 3.79
409 655 1.077212 CCTCCCCCAAGTCATGCTG 60.077 63.158 0.00 0.00 0.00 4.41
410 656 1.687612 CTCCCCCAAGTCATGCTGT 59.312 57.895 0.00 0.00 0.00 4.40
411 657 0.038744 CTCCCCCAAGTCATGCTGTT 59.961 55.000 0.00 0.00 0.00 3.16
412 658 0.038166 TCCCCCAAGTCATGCTGTTC 59.962 55.000 0.00 0.00 0.00 3.18
413 659 0.038744 CCCCCAAGTCATGCTGTTCT 59.961 55.000 0.00 0.00 0.00 3.01
414 660 1.171308 CCCCAAGTCATGCTGTTCTG 58.829 55.000 0.00 0.00 0.00 3.02
415 661 1.271543 CCCCAAGTCATGCTGTTCTGA 60.272 52.381 0.00 0.00 0.00 3.27
416 662 2.082231 CCCAAGTCATGCTGTTCTGAG 58.918 52.381 0.00 0.00 0.00 3.35
417 663 2.289882 CCCAAGTCATGCTGTTCTGAGA 60.290 50.000 0.00 0.00 0.00 3.27
418 664 3.405831 CCAAGTCATGCTGTTCTGAGAA 58.594 45.455 0.00 0.00 0.00 2.87
419 665 3.817084 CCAAGTCATGCTGTTCTGAGAAA 59.183 43.478 0.00 0.00 0.00 2.52
420 666 4.458295 CCAAGTCATGCTGTTCTGAGAAAT 59.542 41.667 0.00 0.00 0.00 2.17
421 667 5.391736 CCAAGTCATGCTGTTCTGAGAAATC 60.392 44.000 0.00 0.00 0.00 2.17
422 668 4.903054 AGTCATGCTGTTCTGAGAAATCA 58.097 39.130 0.00 0.00 0.00 2.57
423 669 5.498393 AGTCATGCTGTTCTGAGAAATCAT 58.502 37.500 0.00 0.00 0.00 2.45
424 670 5.354513 AGTCATGCTGTTCTGAGAAATCATG 59.645 40.000 18.42 18.42 33.41 3.07
425 671 5.123502 GTCATGCTGTTCTGAGAAATCATGT 59.876 40.000 21.19 0.00 33.74 3.21
426 672 5.708697 TCATGCTGTTCTGAGAAATCATGTT 59.291 36.000 21.19 0.00 33.74 2.71
427 673 5.366829 TGCTGTTCTGAGAAATCATGTTG 57.633 39.130 0.00 0.00 0.00 3.33
428 674 4.823442 TGCTGTTCTGAGAAATCATGTTGT 59.177 37.500 0.00 0.00 0.00 3.32
429 675 5.300034 TGCTGTTCTGAGAAATCATGTTGTT 59.700 36.000 0.00 0.00 0.00 2.83
430 676 6.486320 TGCTGTTCTGAGAAATCATGTTGTTA 59.514 34.615 0.00 0.00 0.00 2.41
431 677 6.798959 GCTGTTCTGAGAAATCATGTTGTTAC 59.201 38.462 0.00 0.00 0.00 2.50
432 678 7.308229 GCTGTTCTGAGAAATCATGTTGTTACT 60.308 37.037 0.00 0.00 0.00 2.24
433 679 7.864686 TGTTCTGAGAAATCATGTTGTTACTG 58.135 34.615 0.00 0.00 0.00 2.74
434 680 7.498900 TGTTCTGAGAAATCATGTTGTTACTGT 59.501 33.333 0.00 0.00 0.00 3.55
435 681 7.425577 TCTGAGAAATCATGTTGTTACTGTG 57.574 36.000 0.00 0.00 0.00 3.66
436 682 7.216494 TCTGAGAAATCATGTTGTTACTGTGA 58.784 34.615 0.00 0.00 0.00 3.58
437 683 7.879677 TCTGAGAAATCATGTTGTTACTGTGAT 59.120 33.333 0.00 0.00 34.22 3.06
438 684 9.154847 CTGAGAAATCATGTTGTTACTGTGATA 57.845 33.333 0.00 0.00 33.22 2.15
439 685 9.671279 TGAGAAATCATGTTGTTACTGTGATAT 57.329 29.630 0.00 0.00 33.22 1.63
443 689 9.905713 AAATCATGTTGTTACTGTGATATACCT 57.094 29.630 0.00 0.00 33.22 3.08
444 690 9.905713 AATCATGTTGTTACTGTGATATACCTT 57.094 29.630 0.00 0.00 33.22 3.50
445 691 9.905713 ATCATGTTGTTACTGTGATATACCTTT 57.094 29.630 0.00 0.00 32.42 3.11
446 692 9.378551 TCATGTTGTTACTGTGATATACCTTTC 57.621 33.333 0.00 0.00 0.00 2.62
447 693 9.383519 CATGTTGTTACTGTGATATACCTTTCT 57.616 33.333 0.00 0.00 0.00 2.52
457 703 9.632807 CTGTGATATACCTTTCTATTCTGTAGC 57.367 37.037 0.00 0.00 0.00 3.58
458 704 9.143155 TGTGATATACCTTTCTATTCTGTAGCA 57.857 33.333 0.00 0.00 0.00 3.49
459 705 9.982651 GTGATATACCTTTCTATTCTGTAGCAA 57.017 33.333 0.00 0.00 0.00 3.91
464 710 7.430760 ACCTTTCTATTCTGTAGCAAGATCT 57.569 36.000 0.00 0.00 0.00 2.75
465 711 7.856415 ACCTTTCTATTCTGTAGCAAGATCTT 58.144 34.615 0.88 0.88 0.00 2.40
466 712 8.982723 ACCTTTCTATTCTGTAGCAAGATCTTA 58.017 33.333 7.86 0.00 0.00 2.10
467 713 9.823647 CCTTTCTATTCTGTAGCAAGATCTTAA 57.176 33.333 7.86 0.00 0.00 1.85
475 721 9.890629 TTCTGTAGCAAGATCTTAATACAATGT 57.109 29.630 22.53 0.00 0.00 2.71
476 722 9.890629 TCTGTAGCAAGATCTTAATACAATGTT 57.109 29.630 22.53 7.17 0.00 2.71
510 756 8.693542 AAGATAGCATTTTTAGATGTTTGCAC 57.306 30.769 0.00 0.00 32.66 4.57
511 757 8.059798 AGATAGCATTTTTAGATGTTTGCACT 57.940 30.769 0.00 0.00 32.66 4.40
512 758 9.177608 AGATAGCATTTTTAGATGTTTGCACTA 57.822 29.630 0.00 0.00 32.66 2.74
513 759 9.956720 GATAGCATTTTTAGATGTTTGCACTAT 57.043 29.630 0.00 0.00 32.66 2.12
514 760 9.956720 ATAGCATTTTTAGATGTTTGCACTATC 57.043 29.630 0.00 0.00 32.66 2.08
515 761 8.059798 AGCATTTTTAGATGTTTGCACTATCT 57.940 30.769 10.36 10.36 35.49 1.98
516 762 8.526147 AGCATTTTTAGATGTTTGCACTATCTT 58.474 29.630 10.68 0.00 33.51 2.40
517 763 9.787532 GCATTTTTAGATGTTTGCACTATCTTA 57.212 29.630 10.68 1.56 33.51 2.10
529 775 9.237846 GTTTGCACTATCTTATCTAAATTTGGC 57.762 33.333 0.00 0.00 0.00 4.52
530 776 8.518430 TTGCACTATCTTATCTAAATTTGGCA 57.482 30.769 0.00 0.00 0.00 4.92
531 777 8.518430 TGCACTATCTTATCTAAATTTGGCAA 57.482 30.769 0.00 0.00 0.00 4.52
532 778 9.135189 TGCACTATCTTATCTAAATTTGGCAAT 57.865 29.630 0.00 0.00 0.00 3.56
533 779 9.617975 GCACTATCTTATCTAAATTTGGCAATC 57.382 33.333 0.00 0.00 0.00 2.67
535 781 9.301897 ACTATCTTATCTAAATTTGGCAATCCC 57.698 33.333 0.00 0.00 0.00 3.85
536 782 9.525826 CTATCTTATCTAAATTTGGCAATCCCT 57.474 33.333 0.00 0.00 0.00 4.20
537 783 7.587037 TCTTATCTAAATTTGGCAATCCCTG 57.413 36.000 0.00 0.00 0.00 4.45
546 792 3.281332 GCAATCCCTGCCTACCAAA 57.719 52.632 0.00 0.00 46.13 3.28
547 793 1.780503 GCAATCCCTGCCTACCAAAT 58.219 50.000 0.00 0.00 46.13 2.32
548 794 2.944129 GCAATCCCTGCCTACCAAATA 58.056 47.619 0.00 0.00 46.13 1.40
549 795 3.295973 GCAATCCCTGCCTACCAAATAA 58.704 45.455 0.00 0.00 46.13 1.40
550 796 3.319122 GCAATCCCTGCCTACCAAATAAG 59.681 47.826 0.00 0.00 46.13 1.73
551 797 4.536765 CAATCCCTGCCTACCAAATAAGT 58.463 43.478 0.00 0.00 0.00 2.24
552 798 4.881157 ATCCCTGCCTACCAAATAAGTT 57.119 40.909 0.00 0.00 0.00 2.66
553 799 4.668138 TCCCTGCCTACCAAATAAGTTT 57.332 40.909 0.00 0.00 0.00 2.66
554 800 5.005628 TCCCTGCCTACCAAATAAGTTTT 57.994 39.130 0.00 0.00 0.00 2.43
555 801 5.399113 TCCCTGCCTACCAAATAAGTTTTT 58.601 37.500 0.00 0.00 0.00 1.94
556 802 5.479027 TCCCTGCCTACCAAATAAGTTTTTC 59.521 40.000 0.00 0.00 0.00 2.29
557 803 5.245075 CCCTGCCTACCAAATAAGTTTTTCA 59.755 40.000 0.00 0.00 0.00 2.69
558 804 6.070824 CCCTGCCTACCAAATAAGTTTTTCAT 60.071 38.462 0.00 0.00 0.00 2.57
559 805 7.123547 CCCTGCCTACCAAATAAGTTTTTCATA 59.876 37.037 0.00 0.00 0.00 2.15
560 806 8.695456 CCTGCCTACCAAATAAGTTTTTCATAT 58.305 33.333 0.00 0.00 0.00 1.78
561 807 9.520204 CTGCCTACCAAATAAGTTTTTCATATG 57.480 33.333 0.00 0.00 0.00 1.78
562 808 9.249053 TGCCTACCAAATAAGTTTTTCATATGA 57.751 29.630 0.00 0.00 0.00 2.15
567 813 9.320295 ACCAAATAAGTTTTTCATATGAAGGGA 57.680 29.630 17.28 6.26 35.21 4.20
575 821 9.533831 AGTTTTTCATATGAAGGGAATTGTAGT 57.466 29.630 17.28 0.00 35.21 2.73
579 825 9.967451 TTTCATATGAAGGGAATTGTAGTTACA 57.033 29.630 17.28 0.00 35.21 2.41
580 826 9.613428 TTCATATGAAGGGAATTGTAGTTACAG 57.387 33.333 14.23 0.00 37.52 2.74
581 827 8.988060 TCATATGAAGGGAATTGTAGTTACAGA 58.012 33.333 1.98 0.00 37.52 3.41
582 828 9.265901 CATATGAAGGGAATTGTAGTTACAGAG 57.734 37.037 0.00 0.00 37.52 3.35
583 829 6.049955 TGAAGGGAATTGTAGTTACAGAGG 57.950 41.667 0.00 0.00 37.52 3.69
584 830 5.546499 TGAAGGGAATTGTAGTTACAGAGGT 59.454 40.000 0.00 0.00 37.52 3.85
585 831 6.043938 TGAAGGGAATTGTAGTTACAGAGGTT 59.956 38.462 0.00 0.00 37.52 3.50
586 832 6.449830 AGGGAATTGTAGTTACAGAGGTTT 57.550 37.500 0.00 0.00 37.52 3.27
587 833 6.238648 AGGGAATTGTAGTTACAGAGGTTTG 58.761 40.000 0.00 0.00 37.52 2.93
588 834 5.414765 GGGAATTGTAGTTACAGAGGTTTGG 59.585 44.000 0.00 0.00 37.52 3.28
589 835 5.414765 GGAATTGTAGTTACAGAGGTTTGGG 59.585 44.000 0.00 0.00 37.52 4.12
590 836 4.360951 TTGTAGTTACAGAGGTTTGGGG 57.639 45.455 0.00 0.00 37.52 4.96
591 837 2.640826 TGTAGTTACAGAGGTTTGGGGG 59.359 50.000 0.00 0.00 0.00 5.40
592 838 1.829138 AGTTACAGAGGTTTGGGGGT 58.171 50.000 0.00 0.00 0.00 4.95
593 839 2.141067 AGTTACAGAGGTTTGGGGGTT 58.859 47.619 0.00 0.00 0.00 4.11
594 840 2.516702 AGTTACAGAGGTTTGGGGGTTT 59.483 45.455 0.00 0.00 0.00 3.27
595 841 2.889045 GTTACAGAGGTTTGGGGGTTTC 59.111 50.000 0.00 0.00 0.00 2.78
596 842 0.930726 ACAGAGGTTTGGGGGTTTCA 59.069 50.000 0.00 0.00 0.00 2.69
597 843 1.289530 ACAGAGGTTTGGGGGTTTCAA 59.710 47.619 0.00 0.00 0.00 2.69
598 844 2.292587 ACAGAGGTTTGGGGGTTTCAAA 60.293 45.455 0.00 0.00 0.00 2.69
599 845 2.365293 CAGAGGTTTGGGGGTTTCAAAG 59.635 50.000 0.00 0.00 35.16 2.77
600 846 1.691976 GAGGTTTGGGGGTTTCAAAGG 59.308 52.381 0.00 0.00 35.16 3.11
601 847 0.762418 GGTTTGGGGGTTTCAAAGGG 59.238 55.000 0.00 0.00 35.16 3.95
602 848 1.693083 GGTTTGGGGGTTTCAAAGGGA 60.693 52.381 0.00 0.00 35.16 4.20
603 849 2.334977 GTTTGGGGGTTTCAAAGGGAT 58.665 47.619 0.00 0.00 35.16 3.85
604 850 2.708861 GTTTGGGGGTTTCAAAGGGATT 59.291 45.455 0.00 0.00 35.16 3.01
605 851 2.805290 TGGGGGTTTCAAAGGGATTT 57.195 45.000 0.00 0.00 0.00 2.17
606 852 2.334023 TGGGGGTTTCAAAGGGATTTG 58.666 47.619 0.00 0.00 0.00 2.32
607 853 1.628340 GGGGGTTTCAAAGGGATTTGG 59.372 52.381 1.24 0.00 32.99 3.28
608 854 1.628340 GGGGTTTCAAAGGGATTTGGG 59.372 52.381 1.24 0.00 32.99 4.12
609 855 2.615391 GGGTTTCAAAGGGATTTGGGA 58.385 47.619 1.24 0.00 32.99 4.37
610 856 2.567169 GGGTTTCAAAGGGATTTGGGAG 59.433 50.000 1.24 0.00 32.99 4.30
611 857 2.567169 GGTTTCAAAGGGATTTGGGAGG 59.433 50.000 1.24 0.00 32.99 4.30
612 858 3.506398 GTTTCAAAGGGATTTGGGAGGA 58.494 45.455 1.24 0.00 32.99 3.71
613 859 4.096681 GTTTCAAAGGGATTTGGGAGGAT 58.903 43.478 1.24 0.00 32.99 3.24
614 860 4.418395 TTCAAAGGGATTTGGGAGGATT 57.582 40.909 1.24 0.00 32.99 3.01
615 861 3.711863 TCAAAGGGATTTGGGAGGATTG 58.288 45.455 1.24 0.00 32.99 2.67
616 862 3.336391 TCAAAGGGATTTGGGAGGATTGA 59.664 43.478 1.24 0.00 32.99 2.57
617 863 3.677156 AAGGGATTTGGGAGGATTGAG 57.323 47.619 0.00 0.00 0.00 3.02
618 864 2.577970 AGGGATTTGGGAGGATTGAGT 58.422 47.619 0.00 0.00 0.00 3.41
619 865 2.243221 AGGGATTTGGGAGGATTGAGTG 59.757 50.000 0.00 0.00 0.00 3.51
620 866 2.659428 GGATTTGGGAGGATTGAGTGG 58.341 52.381 0.00 0.00 0.00 4.00
621 867 2.242196 GGATTTGGGAGGATTGAGTGGA 59.758 50.000 0.00 0.00 0.00 4.02
622 868 3.309121 GGATTTGGGAGGATTGAGTGGAA 60.309 47.826 0.00 0.00 0.00 3.53
623 869 3.439857 TTTGGGAGGATTGAGTGGAAG 57.560 47.619 0.00 0.00 0.00 3.46
624 870 1.289160 TGGGAGGATTGAGTGGAAGG 58.711 55.000 0.00 0.00 0.00 3.46
625 871 1.203428 TGGGAGGATTGAGTGGAAGGA 60.203 52.381 0.00 0.00 0.00 3.36
626 872 1.488393 GGGAGGATTGAGTGGAAGGAG 59.512 57.143 0.00 0.00 0.00 3.69
627 873 2.472029 GGAGGATTGAGTGGAAGGAGA 58.528 52.381 0.00 0.00 0.00 3.71
628 874 2.433970 GGAGGATTGAGTGGAAGGAGAG 59.566 54.545 0.00 0.00 0.00 3.20
629 875 2.433970 GAGGATTGAGTGGAAGGAGAGG 59.566 54.545 0.00 0.00 0.00 3.69
630 876 2.045047 AGGATTGAGTGGAAGGAGAGGA 59.955 50.000 0.00 0.00 0.00 3.71
631 877 3.044894 GGATTGAGTGGAAGGAGAGGAT 58.955 50.000 0.00 0.00 0.00 3.24
632 878 3.457749 GGATTGAGTGGAAGGAGAGGATT 59.542 47.826 0.00 0.00 0.00 3.01
633 879 4.444164 GGATTGAGTGGAAGGAGAGGATTC 60.444 50.000 0.00 0.00 0.00 2.52
634 880 3.190383 TGAGTGGAAGGAGAGGATTCA 57.810 47.619 0.00 0.00 0.00 2.57
635 881 2.834549 TGAGTGGAAGGAGAGGATTCAC 59.165 50.000 0.00 0.00 0.00 3.18
636 882 2.169561 GAGTGGAAGGAGAGGATTCACC 59.830 54.545 0.00 0.00 34.59 4.02
637 883 1.909302 GTGGAAGGAGAGGATTCACCA 59.091 52.381 0.00 0.00 42.04 4.17
638 884 2.305927 GTGGAAGGAGAGGATTCACCAA 59.694 50.000 0.00 0.00 42.04 3.67
639 885 2.986019 TGGAAGGAGAGGATTCACCAAA 59.014 45.455 0.00 0.00 42.04 3.28
640 886 3.593328 TGGAAGGAGAGGATTCACCAAAT 59.407 43.478 0.00 0.00 42.04 2.32
641 887 4.203226 GGAAGGAGAGGATTCACCAAATC 58.797 47.826 0.00 0.00 42.68 2.17
651 897 5.268118 GATTCACCAAATCCCCTCAAATC 57.732 43.478 0.00 0.00 38.27 2.17
652 898 3.100207 TCACCAAATCCCCTCAAATCC 57.900 47.619 0.00 0.00 0.00 3.01
653 899 2.110578 CACCAAATCCCCTCAAATCCC 58.889 52.381 0.00 0.00 0.00 3.85
654 900 1.008327 ACCAAATCCCCTCAAATCCCC 59.992 52.381 0.00 0.00 0.00 4.81
655 901 1.008206 CCAAATCCCCTCAAATCCCCA 59.992 52.381 0.00 0.00 0.00 4.96
656 902 2.110578 CAAATCCCCTCAAATCCCCAC 58.889 52.381 0.00 0.00 0.00 4.61
657 903 0.636647 AATCCCCTCAAATCCCCACC 59.363 55.000 0.00 0.00 0.00 4.61
658 904 0.554865 ATCCCCTCAAATCCCCACCA 60.555 55.000 0.00 0.00 0.00 4.17
659 905 1.000359 CCCCTCAAATCCCCACCAC 60.000 63.158 0.00 0.00 0.00 4.16
660 906 1.000359 CCCTCAAATCCCCACCACC 60.000 63.158 0.00 0.00 0.00 4.61
661 907 1.000359 CCTCAAATCCCCACCACCC 60.000 63.158 0.00 0.00 0.00 4.61
662 908 1.000359 CTCAAATCCCCACCACCCC 60.000 63.158 0.00 0.00 0.00 4.95
663 909 1.780488 TCAAATCCCCACCACCCCA 60.780 57.895 0.00 0.00 0.00 4.96
664 910 1.157276 CAAATCCCCACCACCCCAA 59.843 57.895 0.00 0.00 0.00 4.12
665 911 0.252650 CAAATCCCCACCACCCCAAT 60.253 55.000 0.00 0.00 0.00 3.16
666 912 0.042581 AAATCCCCACCACCCCAATC 59.957 55.000 0.00 0.00 0.00 2.67
667 913 1.885593 AATCCCCACCACCCCAATCC 61.886 60.000 0.00 0.00 0.00 3.01
668 914 2.823662 ATCCCCACCACCCCAATCCT 62.824 60.000 0.00 0.00 0.00 3.24
669 915 2.683475 CCCACCACCCCAATCCTC 59.317 66.667 0.00 0.00 0.00 3.71
670 916 1.930656 CCCACCACCCCAATCCTCT 60.931 63.158 0.00 0.00 0.00 3.69
671 917 1.609783 CCACCACCCCAATCCTCTC 59.390 63.158 0.00 0.00 0.00 3.20
672 918 1.207488 CCACCACCCCAATCCTCTCA 61.207 60.000 0.00 0.00 0.00 3.27
673 919 0.698238 CACCACCCCAATCCTCTCAA 59.302 55.000 0.00 0.00 0.00 3.02
674 920 1.075374 CACCACCCCAATCCTCTCAAA 59.925 52.381 0.00 0.00 0.00 2.69
675 921 2.003072 ACCACCCCAATCCTCTCAAAT 58.997 47.619 0.00 0.00 0.00 2.32
676 922 3.053693 CACCACCCCAATCCTCTCAAATA 60.054 47.826 0.00 0.00 0.00 1.40
677 923 3.053619 ACCACCCCAATCCTCTCAAATAC 60.054 47.826 0.00 0.00 0.00 1.89
678 924 3.053693 CCACCCCAATCCTCTCAAATACA 60.054 47.826 0.00 0.00 0.00 2.29
679 925 3.947834 CACCCCAATCCTCTCAAATACAC 59.052 47.826 0.00 0.00 0.00 2.90
680 926 3.852578 ACCCCAATCCTCTCAAATACACT 59.147 43.478 0.00 0.00 0.00 3.55
681 927 4.292306 ACCCCAATCCTCTCAAATACACTT 59.708 41.667 0.00 0.00 0.00 3.16
682 928 4.884164 CCCCAATCCTCTCAAATACACTTC 59.116 45.833 0.00 0.00 0.00 3.01
683 929 5.339530 CCCCAATCCTCTCAAATACACTTCT 60.340 44.000 0.00 0.00 0.00 2.85
684 930 6.126768 CCCCAATCCTCTCAAATACACTTCTA 60.127 42.308 0.00 0.00 0.00 2.10
685 931 6.763610 CCCAATCCTCTCAAATACACTTCTAC 59.236 42.308 0.00 0.00 0.00 2.59
686 932 6.763610 CCAATCCTCTCAAATACACTTCTACC 59.236 42.308 0.00 0.00 0.00 3.18
687 933 7.331026 CAATCCTCTCAAATACACTTCTACCA 58.669 38.462 0.00 0.00 0.00 3.25
688 934 6.928348 TCCTCTCAAATACACTTCTACCAA 57.072 37.500 0.00 0.00 0.00 3.67
689 935 7.311092 TCCTCTCAAATACACTTCTACCAAA 57.689 36.000 0.00 0.00 0.00 3.28
690 936 7.918076 TCCTCTCAAATACACTTCTACCAAAT 58.082 34.615 0.00 0.00 0.00 2.32
691 937 7.824289 TCCTCTCAAATACACTTCTACCAAATG 59.176 37.037 0.00 0.00 0.00 2.32
692 938 7.824289 CCTCTCAAATACACTTCTACCAAATGA 59.176 37.037 0.00 0.00 0.00 2.57
693 939 8.777865 TCTCAAATACACTTCTACCAAATGAG 57.222 34.615 0.00 0.00 0.00 2.90
694 940 7.824289 TCTCAAATACACTTCTACCAAATGAGG 59.176 37.037 0.00 0.00 32.42 3.86
695 941 6.374333 TCAAATACACTTCTACCAAATGAGGC 59.626 38.462 0.00 0.00 0.00 4.70
696 942 3.073274 ACACTTCTACCAAATGAGGCC 57.927 47.619 0.00 0.00 0.00 5.19
697 943 2.644798 ACACTTCTACCAAATGAGGCCT 59.355 45.455 3.86 3.86 0.00 5.19
698 944 3.074538 ACACTTCTACCAAATGAGGCCTT 59.925 43.478 6.77 0.00 0.00 4.35
699 945 4.288626 ACACTTCTACCAAATGAGGCCTTA 59.711 41.667 6.77 1.66 0.00 2.69
700 946 5.222048 ACACTTCTACCAAATGAGGCCTTAA 60.222 40.000 6.77 0.00 0.00 1.85
701 947 5.888161 CACTTCTACCAAATGAGGCCTTAAT 59.112 40.000 6.77 0.32 0.00 1.40
702 948 7.054124 CACTTCTACCAAATGAGGCCTTAATA 58.946 38.462 6.77 0.00 0.00 0.98
703 949 7.012421 CACTTCTACCAAATGAGGCCTTAATAC 59.988 40.741 6.77 0.00 0.00 1.89
704 950 6.824958 TCTACCAAATGAGGCCTTAATACT 57.175 37.500 6.77 0.00 0.00 2.12
705 951 7.924358 TCTACCAAATGAGGCCTTAATACTA 57.076 36.000 6.77 0.00 0.00 1.82
706 952 8.326765 TCTACCAAATGAGGCCTTAATACTAA 57.673 34.615 6.77 0.00 0.00 2.24
707 953 8.945193 TCTACCAAATGAGGCCTTAATACTAAT 58.055 33.333 6.77 0.00 0.00 1.73
708 954 7.823745 ACCAAATGAGGCCTTAATACTAATG 57.176 36.000 6.77 0.00 0.00 1.90
709 955 6.777580 ACCAAATGAGGCCTTAATACTAATGG 59.222 38.462 6.77 2.38 0.00 3.16
710 956 6.777580 CCAAATGAGGCCTTAATACTAATGGT 59.222 38.462 6.77 0.00 0.00 3.55
711 957 7.287696 CCAAATGAGGCCTTAATACTAATGGTT 59.712 37.037 6.77 0.00 0.00 3.67
712 958 8.352942 CAAATGAGGCCTTAATACTAATGGTTC 58.647 37.037 6.77 0.00 0.00 3.62
713 959 6.569127 TGAGGCCTTAATACTAATGGTTCA 57.431 37.500 6.77 0.00 0.00 3.18
714 960 6.354130 TGAGGCCTTAATACTAATGGTTCAC 58.646 40.000 6.77 0.00 0.00 3.18
715 961 5.365619 AGGCCTTAATACTAATGGTTCACG 58.634 41.667 0.00 0.00 0.00 4.35
716 962 5.104652 AGGCCTTAATACTAATGGTTCACGT 60.105 40.000 0.00 0.00 0.00 4.49
717 963 5.235831 GGCCTTAATACTAATGGTTCACGTC 59.764 44.000 0.00 0.00 0.00 4.34
718 964 5.813672 GCCTTAATACTAATGGTTCACGTCA 59.186 40.000 0.00 0.00 0.00 4.35
719 965 6.314400 GCCTTAATACTAATGGTTCACGTCAA 59.686 38.462 0.00 0.00 0.00 3.18
720 966 7.675637 GCCTTAATACTAATGGTTCACGTCAAC 60.676 40.741 0.00 0.00 0.00 3.18
721 967 7.201582 CCTTAATACTAATGGTTCACGTCAACC 60.202 40.741 15.28 15.28 45.54 3.77
726 972 2.613390 GGTTCACGTCAACCAGTCC 58.387 57.895 17.31 0.00 44.79 3.85
727 973 1.219522 GGTTCACGTCAACCAGTCCG 61.220 60.000 17.31 0.00 44.79 4.79
728 974 0.529119 GTTCACGTCAACCAGTCCGT 60.529 55.000 0.00 0.00 0.00 4.69
729 975 3.625232 CACGTCAACCAGTCCGTG 58.375 61.111 0.00 0.00 43.70 4.94
730 976 3.528853 ACGTCAACCAGTCCGTGA 58.471 55.556 0.00 0.00 31.43 4.35
731 977 1.817881 ACGTCAACCAGTCCGTGAA 59.182 52.632 0.00 0.00 31.43 3.18
732 978 0.176219 ACGTCAACCAGTCCGTGAAA 59.824 50.000 0.00 0.00 31.43 2.69
733 979 0.580104 CGTCAACCAGTCCGTGAAAC 59.420 55.000 0.00 0.00 0.00 2.78
734 980 0.942252 GTCAACCAGTCCGTGAAACC 59.058 55.000 0.00 0.00 0.00 3.27
735 981 0.179040 TCAACCAGTCCGTGAAACCC 60.179 55.000 0.00 0.00 0.00 4.11
736 982 1.149854 AACCAGTCCGTGAAACCCC 59.850 57.895 0.00 0.00 0.00 4.95
737 983 2.358247 CCAGTCCGTGAAACCCCG 60.358 66.667 0.00 0.00 0.00 5.73
738 984 2.424302 CAGTCCGTGAAACCCCGT 59.576 61.111 0.00 0.00 0.00 5.28
739 985 1.667151 CAGTCCGTGAAACCCCGTA 59.333 57.895 0.00 0.00 0.00 4.02
740 986 0.033781 CAGTCCGTGAAACCCCGTAA 59.966 55.000 0.00 0.00 0.00 3.18
741 987 0.758123 AGTCCGTGAAACCCCGTAAA 59.242 50.000 0.00 0.00 0.00 2.01
742 988 1.140652 AGTCCGTGAAACCCCGTAAAA 59.859 47.619 0.00 0.00 0.00 1.52
743 989 1.946081 GTCCGTGAAACCCCGTAAAAA 59.054 47.619 0.00 0.00 0.00 1.94
744 990 2.553602 GTCCGTGAAACCCCGTAAAAAT 59.446 45.455 0.00 0.00 0.00 1.82
745 991 3.750652 GTCCGTGAAACCCCGTAAAAATA 59.249 43.478 0.00 0.00 0.00 1.40
746 992 4.215185 GTCCGTGAAACCCCGTAAAAATAA 59.785 41.667 0.00 0.00 0.00 1.40
747 993 5.008980 TCCGTGAAACCCCGTAAAAATAAT 58.991 37.500 0.00 0.00 0.00 1.28
748 994 5.123661 TCCGTGAAACCCCGTAAAAATAATC 59.876 40.000 0.00 0.00 0.00 1.75
749 995 5.334319 CGTGAAACCCCGTAAAAATAATCC 58.666 41.667 0.00 0.00 0.00 3.01
750 996 5.334319 GTGAAACCCCGTAAAAATAATCCG 58.666 41.667 0.00 0.00 0.00 4.18
751 997 5.008980 TGAAACCCCGTAAAAATAATCCGT 58.991 37.500 0.00 0.00 0.00 4.69
752 998 5.476254 TGAAACCCCGTAAAAATAATCCGTT 59.524 36.000 0.00 0.00 0.00 4.44
753 999 6.656693 TGAAACCCCGTAAAAATAATCCGTTA 59.343 34.615 0.00 0.00 0.00 3.18
754 1000 7.338957 TGAAACCCCGTAAAAATAATCCGTTAT 59.661 33.333 0.00 0.00 31.89 1.89
755 1001 6.622833 ACCCCGTAAAAATAATCCGTTATG 57.377 37.500 0.00 0.00 31.03 1.90
756 1002 6.121590 ACCCCGTAAAAATAATCCGTTATGT 58.878 36.000 0.00 0.00 31.03 2.29
757 1003 7.278875 ACCCCGTAAAAATAATCCGTTATGTA 58.721 34.615 0.00 0.00 31.03 2.29
758 1004 7.442062 ACCCCGTAAAAATAATCCGTTATGTAG 59.558 37.037 0.00 0.00 31.03 2.74
759 1005 7.293018 CCCGTAAAAATAATCCGTTATGTAGC 58.707 38.462 0.00 0.00 31.03 3.58
760 1006 7.172019 CCCGTAAAAATAATCCGTTATGTAGCT 59.828 37.037 0.00 0.00 31.03 3.32
761 1007 8.219105 CCGTAAAAATAATCCGTTATGTAGCTC 58.781 37.037 0.00 0.00 31.03 4.09
793 1039 0.029300 CATTACGGGCCATTTCGCAG 59.971 55.000 4.39 0.00 0.00 5.18
860 1107 0.320374 CCCGTGTCCTCTTGCTACAA 59.680 55.000 0.00 0.00 0.00 2.41
944 1191 4.828296 GCCACCTCCATGCCCCAG 62.828 72.222 0.00 0.00 0.00 4.45
960 1207 3.192630 AGCCCCACCACCACCATT 61.193 61.111 0.00 0.00 0.00 3.16
963 1210 1.464722 CCCCACCACCACCATTTCT 59.535 57.895 0.00 0.00 0.00 2.52
990 1237 1.616628 AGTCCCCAACCCTAGCCAG 60.617 63.158 0.00 0.00 0.00 4.85
1145 1401 2.897350 GGCATTCCTCGCCTTCCG 60.897 66.667 0.00 0.00 46.56 4.30
1299 1555 1.070786 CGCCAACACCACCTACACT 59.929 57.895 0.00 0.00 0.00 3.55
1307 1563 0.104620 ACCACCTACACTGTCCCCTT 60.105 55.000 0.00 0.00 0.00 3.95
1311 1567 1.153823 CTACACTGTCCCCTTCGCG 60.154 63.158 0.00 0.00 0.00 5.87
1545 1801 2.410469 GCAAGCATGGACGCCATC 59.590 61.111 8.21 4.88 43.15 3.51
1675 1952 3.746492 CAGTTCCTTTAACTTCTGTCGGG 59.254 47.826 0.00 0.00 46.61 5.14
1779 2056 1.412343 TGCGAACAGAGGCTGCATATA 59.588 47.619 0.50 0.00 34.37 0.86
1843 2120 6.639563 AGTTAGATTGTTTTGTGCCAAAACT 58.360 32.000 28.16 17.75 39.97 2.66
1860 2137 6.072508 GCCAAAACTGATATTTCTGACAGTGA 60.073 38.462 1.59 0.00 41.73 3.41
1861 2138 7.522073 GCCAAAACTGATATTTCTGACAGTGAA 60.522 37.037 1.59 0.00 41.73 3.18
1989 2266 6.608539 AGGAACTTAAGAAGGTCTAGGAAC 57.391 41.667 10.09 0.00 44.74 3.62
2045 2744 2.420022 GACGTTTTCAGCCAGCATATGT 59.580 45.455 4.29 0.00 0.00 2.29
2364 3102 5.975693 TTTCTGTTCAGTGGAAACAACTT 57.024 34.783 0.00 0.00 46.06 2.66
2438 6349 7.119699 TCTCCTCTACAGTGTAATGCAATTTTG 59.880 37.037 4.21 0.00 37.87 2.44
2605 6519 8.519526 TCAAAATACTTTGCCAGGTACTTAATG 58.480 33.333 0.00 0.00 41.53 1.90
2641 6555 9.490663 CCTTAATGTTTTGAGTAGCTTATTTCG 57.509 33.333 0.00 0.00 0.00 3.46
2712 6626 6.995091 GTGCCCTCATATAGTTGATCTTTCTT 59.005 38.462 0.00 0.00 0.00 2.52
2713 6627 7.172361 GTGCCCTCATATAGTTGATCTTTCTTC 59.828 40.741 0.00 0.00 0.00 2.87
3141 7073 3.259064 CCAATTTGGCAATGAGAAGCAG 58.741 45.455 0.00 0.00 0.00 4.24
3154 7086 3.646162 TGAGAAGCAGTCAAGAAAGGGTA 59.354 43.478 0.00 0.00 0.00 3.69
3163 7095 3.778629 GTCAAGAAAGGGTAGTGGGGATA 59.221 47.826 0.00 0.00 0.00 2.59
3242 7174 7.735917 TCTCATCATTATAACACTTCCGGAAT 58.264 34.615 19.21 5.16 0.00 3.01
3363 7295 3.367025 GGTAATGTAGTGACGTGCAACTC 59.633 47.826 0.00 0.00 31.75 3.01
3390 7322 2.618053 CTGATGGAGTCGTGTTAACCC 58.382 52.381 2.48 0.00 0.00 4.11
3401 7333 0.604578 TGTTAACCCGAGGGACTTCG 59.395 55.000 16.26 0.00 41.55 3.79
3437 7369 6.091169 GTGTCAGGGTTTTTATTTGCATCATG 59.909 38.462 0.00 0.00 0.00 3.07
3456 7388 1.171308 GTGCGACCTGTCCTACAGTA 58.829 55.000 6.33 0.00 44.50 2.74
3461 7393 3.065095 GCGACCTGTCCTACAGTAGTTAG 59.935 52.174 6.84 2.19 44.50 2.34
3559 7491 6.653989 CCCAAGTACTCTGTCCAAATAAGAT 58.346 40.000 0.00 0.00 0.00 2.40
3702 7635 9.244292 CCTACCATACATAAGCTATTCTGACTA 57.756 37.037 0.00 0.00 0.00 2.59
3943 7876 6.849085 ATGACATACCTTGCCAATAACAAA 57.151 33.333 0.00 0.00 0.00 2.83
4085 8018 6.373774 AGTTCTCACAAAATGCTCAATCTAGG 59.626 38.462 0.00 0.00 0.00 3.02
4289 8223 9.715121 TCTGGTACTTGTTTTATGTAAGGTTAG 57.285 33.333 0.00 0.00 0.00 2.34
4535 8488 7.984391 TCGCACACAGTTATCATTATTGATTT 58.016 30.769 5.49 0.00 42.61 2.17
4736 8690 7.606858 TTGTTGATTTCACATTTTTCTTGCA 57.393 28.000 0.00 0.00 0.00 4.08
4737 8691 7.789273 TGTTGATTTCACATTTTTCTTGCAT 57.211 28.000 0.00 0.00 0.00 3.96
4738 8692 7.853524 TGTTGATTTCACATTTTTCTTGCATC 58.146 30.769 0.00 0.00 0.00 3.91
4739 8693 7.494952 TGTTGATTTCACATTTTTCTTGCATCA 59.505 29.630 0.00 0.00 0.00 3.07
4740 8694 7.646446 TGATTTCACATTTTTCTTGCATCAG 57.354 32.000 0.00 0.00 0.00 2.90
4741 8695 7.211573 TGATTTCACATTTTTCTTGCATCAGT 58.788 30.769 0.00 0.00 0.00 3.41
4742 8696 7.711772 TGATTTCACATTTTTCTTGCATCAGTT 59.288 29.630 0.00 0.00 0.00 3.16
4743 8697 9.195411 GATTTCACATTTTTCTTGCATCAGTTA 57.805 29.630 0.00 0.00 0.00 2.24
4744 8698 9.715121 ATTTCACATTTTTCTTGCATCAGTTAT 57.285 25.926 0.00 0.00 0.00 1.89
4746 8700 9.624697 TTCACATTTTTCTTGCATCAGTTATAC 57.375 29.630 0.00 0.00 0.00 1.47
4747 8701 8.243426 TCACATTTTTCTTGCATCAGTTATACC 58.757 33.333 0.00 0.00 0.00 2.73
4748 8702 8.028354 CACATTTTTCTTGCATCAGTTATACCA 58.972 33.333 0.00 0.00 0.00 3.25
4749 8703 8.246180 ACATTTTTCTTGCATCAGTTATACCAG 58.754 33.333 0.00 0.00 0.00 4.00
4750 8704 7.759489 TTTTTCTTGCATCAGTTATACCAGT 57.241 32.000 0.00 0.00 0.00 4.00
4751 8705 7.759489 TTTTCTTGCATCAGTTATACCAGTT 57.241 32.000 0.00 0.00 0.00 3.16
4752 8706 7.759489 TTTCTTGCATCAGTTATACCAGTTT 57.241 32.000 0.00 0.00 0.00 2.66
4753 8707 8.856153 TTTCTTGCATCAGTTATACCAGTTTA 57.144 30.769 0.00 0.00 0.00 2.01
4754 8708 9.461312 TTTCTTGCATCAGTTATACCAGTTTAT 57.539 29.630 0.00 0.00 0.00 1.40
4756 8710 9.764363 TCTTGCATCAGTTATACCAGTTTATAG 57.236 33.333 0.00 0.00 0.00 1.31
4757 8711 9.764363 CTTGCATCAGTTATACCAGTTTATAGA 57.236 33.333 0.00 0.00 0.00 1.98
4808 8762 8.932945 TTATAGACTGACACAGAATGACATTC 57.067 34.615 18.71 18.71 39.69 2.67
4878 8832 1.030457 CCAATGATGCAGAGGCTTCC 58.970 55.000 0.00 0.00 42.00 3.46
4917 8871 1.621317 ACTTTTGGTTATTTGGCCCCG 59.379 47.619 0.00 0.00 0.00 5.73
4958 8912 0.036388 CGGCTGGCTCTGGTTTAAGA 60.036 55.000 0.00 0.00 0.00 2.10
5066 9023 3.199677 CGATGTTTATGCTTTCGGGGTA 58.800 45.455 0.00 0.00 0.00 3.69
5111 9068 0.618458 AGGAGGCGATTACAAAGGCA 59.382 50.000 0.00 0.00 0.00 4.75
5225 9182 4.220602 ACAGCTTGTGGGTTTGGAATTATC 59.779 41.667 0.00 0.00 0.00 1.75
5226 9183 4.463891 CAGCTTGTGGGTTTGGAATTATCT 59.536 41.667 0.00 0.00 0.00 1.98
5227 9184 4.706962 AGCTTGTGGGTTTGGAATTATCTC 59.293 41.667 0.00 0.00 0.00 2.75
5228 9185 4.438744 GCTTGTGGGTTTGGAATTATCTCG 60.439 45.833 0.00 0.00 0.00 4.04
5229 9186 4.295141 TGTGGGTTTGGAATTATCTCGT 57.705 40.909 0.00 0.00 0.00 4.18
5277 9235 6.310956 TCGTCGACTTCTTTTTACACTTTGAA 59.689 34.615 14.70 0.00 0.00 2.69
5294 9252 6.008960 ACTTTGAATCCAAAAGATCTGAGCT 58.991 36.000 0.00 0.00 41.28 4.09
5298 9256 3.430042 TCCAAAAGATCTGAGCTGCTT 57.570 42.857 2.53 0.00 0.00 3.91
5338 9296 4.460263 TGTTGACTGCACTAAGGAATTGT 58.540 39.130 0.00 0.00 0.00 2.71
5348 9306 4.568359 CACTAAGGAATTGTCACGATCCAG 59.432 45.833 0.00 0.00 34.30 3.86
5435 9393 5.841783 TGCATATACCAGGTATGTCCAGTTA 59.158 40.000 21.04 0.00 39.02 2.24
5496 9454 5.534207 TTCACATCACCTTTGCTTCAAAT 57.466 34.783 0.00 0.00 32.70 2.32
5723 9681 3.843027 GGAGGTGATGATCCATCCTGTAT 59.157 47.826 7.17 0.00 39.87 2.29
5724 9682 4.323333 GGAGGTGATGATCCATCCTGTATG 60.323 50.000 7.17 0.00 39.87 2.39
5736 9699 0.737219 CCTGTATGGCTTGCTTGCTC 59.263 55.000 1.96 0.00 0.00 4.26
5876 9839 8.835439 AGTATCGAGCACAGTGAGATATATATG 58.165 37.037 4.15 0.00 0.00 1.78
5889 9852 6.492087 TGAGATATATATGTCGTGGTTGGTCA 59.508 38.462 13.53 0.00 0.00 4.02
5966 9929 1.078918 TGTGCTGAATCGCTCCTGG 60.079 57.895 0.00 0.00 0.00 4.45
5981 9944 3.744660 CTCCTGGTTACTGCTTGTCTTT 58.255 45.455 0.00 0.00 0.00 2.52
5987 9950 5.057149 TGGTTACTGCTTGTCTTTTCTCTC 58.943 41.667 0.00 0.00 0.00 3.20
5988 9951 5.057149 GGTTACTGCTTGTCTTTTCTCTCA 58.943 41.667 0.00 0.00 0.00 3.27
5992 9955 6.705863 ACTGCTTGTCTTTTCTCTCATTTT 57.294 33.333 0.00 0.00 0.00 1.82
6073 10037 3.055530 CCAACAGTGACTAGCTTCCATCT 60.056 47.826 0.00 0.00 0.00 2.90
6229 10193 3.324556 CCAACAATCCCAACTTTCACCAT 59.675 43.478 0.00 0.00 0.00 3.55
6362 10326 8.916654 GTGATGTGTAGTATCTAATGTGTATGC 58.083 37.037 0.00 0.00 0.00 3.14
6364 10328 6.443792 TGTGTAGTATCTAATGTGTATGCCG 58.556 40.000 0.00 0.00 0.00 5.69
6438 10402 3.365767 GCTGATTCTTGTTCTGAGTTGGC 60.366 47.826 0.00 0.00 0.00 4.52
6549 10513 5.106157 GCAATAAAGCTAAGACTGCCTTTGA 60.106 40.000 0.00 0.00 36.34 2.69
6552 10516 1.981495 AGCTAAGACTGCCTTTGAGGT 59.019 47.619 0.00 0.00 37.80 3.85
6612 10611 1.198713 CACCTAGTGCCCTGAGATGT 58.801 55.000 0.00 0.00 0.00 3.06
6661 10660 1.001641 GGCCTTCATGCACACCTCT 60.002 57.895 0.00 0.00 0.00 3.69
6662 10661 0.610232 GGCCTTCATGCACACCTCTT 60.610 55.000 0.00 0.00 0.00 2.85
6663 10662 0.524862 GCCTTCATGCACACCTCTTG 59.475 55.000 0.00 0.00 0.00 3.02
6664 10663 1.883638 GCCTTCATGCACACCTCTTGA 60.884 52.381 0.00 0.00 0.00 3.02
6665 10664 1.808945 CCTTCATGCACACCTCTTGAC 59.191 52.381 0.00 0.00 0.00 3.18
6666 10665 1.462283 CTTCATGCACACCTCTTGACG 59.538 52.381 0.00 0.00 0.00 4.35
6667 10666 0.678950 TCATGCACACCTCTTGACGA 59.321 50.000 0.00 0.00 0.00 4.20
6668 10667 1.276138 TCATGCACACCTCTTGACGAT 59.724 47.619 0.00 0.00 0.00 3.73
6669 10668 1.395954 CATGCACACCTCTTGACGATG 59.604 52.381 0.00 0.00 0.00 3.84
6670 10669 0.950555 TGCACACCTCTTGACGATGC 60.951 55.000 0.00 0.00 0.00 3.91
6671 10670 0.671781 GCACACCTCTTGACGATGCT 60.672 55.000 0.00 0.00 0.00 3.79
6672 10671 1.404181 GCACACCTCTTGACGATGCTA 60.404 52.381 0.00 0.00 0.00 3.49
6673 10672 2.739932 GCACACCTCTTGACGATGCTAT 60.740 50.000 0.00 0.00 0.00 2.97
6674 10673 2.862536 CACACCTCTTGACGATGCTATG 59.137 50.000 0.00 0.00 0.00 2.23
6675 10674 2.159043 ACACCTCTTGACGATGCTATGG 60.159 50.000 0.00 0.00 0.00 2.74
6676 10675 2.101415 CACCTCTTGACGATGCTATGGA 59.899 50.000 0.00 0.00 0.00 3.41
6677 10676 2.101582 ACCTCTTGACGATGCTATGGAC 59.898 50.000 0.00 0.00 0.00 4.02
6678 10677 2.546795 CCTCTTGACGATGCTATGGACC 60.547 54.545 0.00 0.00 0.00 4.46
6679 10678 2.363680 CTCTTGACGATGCTATGGACCT 59.636 50.000 0.00 0.00 0.00 3.85
6680 10679 3.562182 TCTTGACGATGCTATGGACCTA 58.438 45.455 0.00 0.00 0.00 3.08
6681 10680 3.570125 TCTTGACGATGCTATGGACCTAG 59.430 47.826 0.00 0.00 0.00 3.02
6682 10681 2.239400 TGACGATGCTATGGACCTAGG 58.761 52.381 7.41 7.41 0.00 3.02
6683 10682 2.158519 TGACGATGCTATGGACCTAGGA 60.159 50.000 17.98 0.00 0.00 2.94
6684 10683 2.229302 GACGATGCTATGGACCTAGGAC 59.771 54.545 17.98 9.70 0.00 3.85
6685 10684 2.239400 CGATGCTATGGACCTAGGACA 58.761 52.381 17.98 14.48 0.00 4.02
6686 10685 2.230025 CGATGCTATGGACCTAGGACAG 59.770 54.545 17.98 4.17 0.00 3.51
6697 10696 1.343069 CTAGGACAGGGTCATAGGCC 58.657 60.000 9.52 0.00 41.41 5.19
6698 10697 0.941963 TAGGACAGGGTCATAGGCCT 59.058 55.000 11.78 11.78 33.68 5.19
6699 10698 0.692419 AGGACAGGGTCATAGGCCTG 60.692 60.000 17.99 0.00 33.68 4.85
6700 10699 0.691078 GGACAGGGTCATAGGCCTGA 60.691 60.000 17.99 2.17 33.68 3.86
6701 10700 0.466124 GACAGGGTCATAGGCCTGAC 59.534 60.000 17.99 16.31 43.90 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 6.042666 GGGCAGAGAGATTAGTTAGAAGGATT 59.957 42.308 0.00 0.00 0.00 3.01
5 6 5.542251 GGGCAGAGAGATTAGTTAGAAGGAT 59.458 44.000 0.00 0.00 0.00 3.24
6 7 4.896482 GGGCAGAGAGATTAGTTAGAAGGA 59.104 45.833 0.00 0.00 0.00 3.36
7 8 4.039852 GGGGCAGAGAGATTAGTTAGAAGG 59.960 50.000 0.00 0.00 0.00 3.46
8 9 4.039852 GGGGGCAGAGAGATTAGTTAGAAG 59.960 50.000 0.00 0.00 0.00 2.85
9 10 3.967987 GGGGGCAGAGAGATTAGTTAGAA 59.032 47.826 0.00 0.00 0.00 2.10
10 11 3.577919 GGGGGCAGAGAGATTAGTTAGA 58.422 50.000 0.00 0.00 0.00 2.10
28 29 3.305181 CCCCTGAAAATCAAGGGGG 57.695 57.895 17.70 11.84 43.09 5.40
30 31 1.203174 ACACCCCCTGAAAATCAAGGG 60.203 52.381 7.01 7.01 45.76 3.95
31 32 1.895131 CACACCCCCTGAAAATCAAGG 59.105 52.381 0.00 0.00 0.00 3.61
32 33 1.895131 CCACACCCCCTGAAAATCAAG 59.105 52.381 0.00 0.00 0.00 3.02
33 34 1.482177 CCCACACCCCCTGAAAATCAA 60.482 52.381 0.00 0.00 0.00 2.57
34 35 0.114168 CCCACACCCCCTGAAAATCA 59.886 55.000 0.00 0.00 0.00 2.57
35 36 1.257750 GCCCACACCCCCTGAAAATC 61.258 60.000 0.00 0.00 0.00 2.17
36 37 1.229177 GCCCACACCCCCTGAAAAT 60.229 57.895 0.00 0.00 0.00 1.82
37 38 2.200092 GCCCACACCCCCTGAAAA 59.800 61.111 0.00 0.00 0.00 2.29
38 39 3.909651 GGCCCACACCCCCTGAAA 61.910 66.667 0.00 0.00 0.00 2.69
46 47 4.048470 GGAGGAAGGGCCCACACC 62.048 72.222 27.56 22.94 37.37 4.16
47 48 4.048470 GGGAGGAAGGGCCCACAC 62.048 72.222 27.56 13.42 44.07 3.82
71 72 2.017049 CAAACGAGGCCTAAGGATTGG 58.983 52.381 4.42 0.00 0.00 3.16
72 73 2.017049 CCAAACGAGGCCTAAGGATTG 58.983 52.381 4.42 12.50 0.00 2.67
73 74 1.633945 ACCAAACGAGGCCTAAGGATT 59.366 47.619 4.42 0.00 0.00 3.01
74 75 1.286248 ACCAAACGAGGCCTAAGGAT 58.714 50.000 4.42 0.00 0.00 3.24
75 76 1.551883 GTACCAAACGAGGCCTAAGGA 59.448 52.381 4.42 0.00 0.00 3.36
112 113 2.040412 AGGAATATCGGCTTGAATCCCC 59.960 50.000 0.00 0.00 31.60 4.81
113 114 3.339141 GAGGAATATCGGCTTGAATCCC 58.661 50.000 0.00 0.00 31.60 3.85
114 115 2.996621 CGAGGAATATCGGCTTGAATCC 59.003 50.000 0.00 0.00 39.04 3.01
115 116 2.413453 GCGAGGAATATCGGCTTGAATC 59.587 50.000 0.00 0.00 42.94 2.52
124 125 2.022129 GGCCACGCGAGGAATATCG 61.022 63.158 27.39 0.00 45.48 2.92
167 168 1.887707 CCTCGCCTATCAAACGGGC 60.888 63.158 0.00 0.00 42.18 6.13
179 180 2.516225 GGCCCATGTAACCTCGCC 60.516 66.667 0.00 0.00 0.00 5.54
230 231 3.423154 GGTTCTGAAGCGCGTGGG 61.423 66.667 8.43 0.00 0.00 4.61
234 235 3.181967 CGAGGGTTCTGAAGCGCG 61.182 66.667 12.87 14.25 0.00 6.86
257 258 1.144057 CGACCAAATCCTCGAGGGG 59.856 63.158 30.80 24.64 35.41 4.79
260 261 0.867753 CGAGCGACCAAATCCTCGAG 60.868 60.000 5.13 5.13 44.41 4.04
345 591 3.531207 CGGAGGAGATCGCCAGCA 61.531 66.667 18.44 0.00 34.79 4.41
385 631 4.371231 ACTTGGGGGAGGGGAGGG 62.371 72.222 0.00 0.00 0.00 4.30
386 632 2.692741 GACTTGGGGGAGGGGAGG 60.693 72.222 0.00 0.00 0.00 4.30
387 633 1.308216 ATGACTTGGGGGAGGGGAG 60.308 63.158 0.00 0.00 0.00 4.30
388 634 1.619363 CATGACTTGGGGGAGGGGA 60.619 63.158 0.00 0.00 0.00 4.81
389 635 3.010144 CATGACTTGGGGGAGGGG 58.990 66.667 0.00 0.00 0.00 4.79
390 636 2.276740 GCATGACTTGGGGGAGGG 59.723 66.667 0.00 0.00 0.00 4.30
391 637 1.077212 CAGCATGACTTGGGGGAGG 60.077 63.158 0.00 0.00 39.69 4.30
392 638 0.038744 AACAGCATGACTTGGGGGAG 59.961 55.000 0.00 0.00 39.69 4.30
393 639 0.038166 GAACAGCATGACTTGGGGGA 59.962 55.000 0.00 0.00 39.69 4.81
394 640 0.038744 AGAACAGCATGACTTGGGGG 59.961 55.000 0.00 0.00 39.69 5.40
395 641 1.171308 CAGAACAGCATGACTTGGGG 58.829 55.000 0.00 0.00 39.69 4.96
396 642 2.082231 CTCAGAACAGCATGACTTGGG 58.918 52.381 0.00 0.00 39.69 4.12
397 643 3.049708 TCTCAGAACAGCATGACTTGG 57.950 47.619 0.00 0.00 39.69 3.61
398 644 5.180680 TGATTTCTCAGAACAGCATGACTTG 59.819 40.000 0.00 0.00 39.69 3.16
399 645 5.311265 TGATTTCTCAGAACAGCATGACTT 58.689 37.500 0.00 0.00 39.69 3.01
400 646 4.903054 TGATTTCTCAGAACAGCATGACT 58.097 39.130 0.00 0.00 39.69 3.41
401 647 5.123502 ACATGATTTCTCAGAACAGCATGAC 59.876 40.000 23.20 0.00 35.19 3.06
402 648 5.250982 ACATGATTTCTCAGAACAGCATGA 58.749 37.500 23.20 0.00 35.19 3.07
403 649 5.562506 ACATGATTTCTCAGAACAGCATG 57.437 39.130 18.40 18.40 37.09 4.06
404 650 5.475909 ACAACATGATTTCTCAGAACAGCAT 59.524 36.000 0.00 0.00 34.12 3.79
405 651 4.823442 ACAACATGATTTCTCAGAACAGCA 59.177 37.500 0.00 0.00 34.12 4.41
406 652 5.368256 ACAACATGATTTCTCAGAACAGC 57.632 39.130 0.00 0.00 34.12 4.40
407 653 8.013947 CAGTAACAACATGATTTCTCAGAACAG 58.986 37.037 0.00 0.00 34.12 3.16
408 654 7.498900 ACAGTAACAACATGATTTCTCAGAACA 59.501 33.333 0.00 0.00 34.12 3.18
409 655 7.800380 CACAGTAACAACATGATTTCTCAGAAC 59.200 37.037 0.00 0.00 34.12 3.01
410 656 7.714813 TCACAGTAACAACATGATTTCTCAGAA 59.285 33.333 0.00 0.00 34.12 3.02
411 657 7.216494 TCACAGTAACAACATGATTTCTCAGA 58.784 34.615 0.00 0.00 34.12 3.27
412 658 7.425577 TCACAGTAACAACATGATTTCTCAG 57.574 36.000 0.00 0.00 34.12 3.35
413 659 7.984422 ATCACAGTAACAACATGATTTCTCA 57.016 32.000 0.00 0.00 35.41 3.27
417 663 9.905713 AGGTATATCACAGTAACAACATGATTT 57.094 29.630 0.00 0.00 32.42 2.17
418 664 9.905713 AAGGTATATCACAGTAACAACATGATT 57.094 29.630 0.00 0.00 32.42 2.57
419 665 9.905713 AAAGGTATATCACAGTAACAACATGAT 57.094 29.630 0.00 0.00 34.48 2.45
420 666 9.378551 GAAAGGTATATCACAGTAACAACATGA 57.621 33.333 0.00 0.00 0.00 3.07
421 667 9.383519 AGAAAGGTATATCACAGTAACAACATG 57.616 33.333 0.00 0.00 0.00 3.21
431 677 9.632807 GCTACAGAATAGAAAGGTATATCACAG 57.367 37.037 0.00 0.00 0.00 3.66
432 678 9.143155 TGCTACAGAATAGAAAGGTATATCACA 57.857 33.333 0.00 0.00 0.00 3.58
433 679 9.982651 TTGCTACAGAATAGAAAGGTATATCAC 57.017 33.333 0.00 0.00 0.00 3.06
438 684 9.153479 AGATCTTGCTACAGAATAGAAAGGTAT 57.847 33.333 2.51 0.00 32.32 2.73
439 685 8.540507 AGATCTTGCTACAGAATAGAAAGGTA 57.459 34.615 2.51 0.00 32.32 3.08
440 686 7.430760 AGATCTTGCTACAGAATAGAAAGGT 57.569 36.000 2.51 0.00 32.32 3.50
441 687 9.823647 TTAAGATCTTGCTACAGAATAGAAAGG 57.176 33.333 18.47 0.00 32.32 3.11
449 695 9.890629 ACATTGTATTAAGATCTTGCTACAGAA 57.109 29.630 18.47 10.85 0.00 3.02
450 696 9.890629 AACATTGTATTAAGATCTTGCTACAGA 57.109 29.630 18.47 13.93 0.00 3.41
484 730 9.143631 GTGCAAACATCTAAAAATGCTATCTTT 57.856 29.630 0.00 0.00 34.97 2.52
485 731 8.526147 AGTGCAAACATCTAAAAATGCTATCTT 58.474 29.630 0.00 0.00 34.97 2.40
486 732 8.059798 AGTGCAAACATCTAAAAATGCTATCT 57.940 30.769 0.00 0.00 34.97 1.98
487 733 9.956720 ATAGTGCAAACATCTAAAAATGCTATC 57.043 29.630 0.00 0.00 34.97 2.08
488 734 9.956720 GATAGTGCAAACATCTAAAAATGCTAT 57.043 29.630 0.00 0.00 34.97 2.97
489 735 9.177608 AGATAGTGCAAACATCTAAAAATGCTA 57.822 29.630 4.57 0.00 34.97 3.49
490 736 8.059798 AGATAGTGCAAACATCTAAAAATGCT 57.940 30.769 4.57 0.00 34.97 3.79
491 737 8.693542 AAGATAGTGCAAACATCTAAAAATGC 57.306 30.769 6.43 0.00 0.00 3.56
503 749 9.237846 GCCAAATTTAGATAAGATAGTGCAAAC 57.762 33.333 0.00 0.00 0.00 2.93
504 750 8.965819 TGCCAAATTTAGATAAGATAGTGCAAA 58.034 29.630 0.00 0.00 0.00 3.68
505 751 8.518430 TGCCAAATTTAGATAAGATAGTGCAA 57.482 30.769 0.00 0.00 0.00 4.08
506 752 8.518430 TTGCCAAATTTAGATAAGATAGTGCA 57.482 30.769 0.00 0.00 0.00 4.57
507 753 9.617975 GATTGCCAAATTTAGATAAGATAGTGC 57.382 33.333 0.00 0.00 0.00 4.40
509 755 9.301897 GGGATTGCCAAATTTAGATAAGATAGT 57.698 33.333 0.00 0.00 35.15 2.12
510 756 9.525826 AGGGATTGCCAAATTTAGATAAGATAG 57.474 33.333 0.00 0.00 35.15 2.08
511 757 9.300681 CAGGGATTGCCAAATTTAGATAAGATA 57.699 33.333 0.00 0.00 35.15 1.98
512 758 8.186709 CAGGGATTGCCAAATTTAGATAAGAT 57.813 34.615 0.00 0.00 35.15 2.40
513 759 7.587037 CAGGGATTGCCAAATTTAGATAAGA 57.413 36.000 0.00 0.00 35.15 2.10
529 775 4.536765 ACTTATTTGGTAGGCAGGGATTG 58.463 43.478 0.00 0.00 0.00 2.67
530 776 4.881157 ACTTATTTGGTAGGCAGGGATT 57.119 40.909 0.00 0.00 0.00 3.01
531 777 4.881157 AACTTATTTGGTAGGCAGGGAT 57.119 40.909 0.00 0.00 0.00 3.85
532 778 4.668138 AAACTTATTTGGTAGGCAGGGA 57.332 40.909 0.00 0.00 0.00 4.20
533 779 5.245075 TGAAAAACTTATTTGGTAGGCAGGG 59.755 40.000 0.00 0.00 0.00 4.45
534 780 6.339587 TGAAAAACTTATTTGGTAGGCAGG 57.660 37.500 0.00 0.00 0.00 4.85
535 781 9.520204 CATATGAAAAACTTATTTGGTAGGCAG 57.480 33.333 0.00 0.00 0.00 4.85
536 782 9.249053 TCATATGAAAAACTTATTTGGTAGGCA 57.751 29.630 1.98 0.00 0.00 4.75
541 787 9.320295 TCCCTTCATATGAAAAACTTATTTGGT 57.680 29.630 18.47 0.00 33.07 3.67
549 795 9.533831 ACTACAATTCCCTTCATATGAAAAACT 57.466 29.630 18.47 2.05 33.07 2.66
553 799 9.967451 TGTAACTACAATTCCCTTCATATGAAA 57.033 29.630 18.47 4.91 31.26 2.69
554 800 9.613428 CTGTAACTACAATTCCCTTCATATGAA 57.387 33.333 17.07 17.07 35.50 2.57
555 801 8.988060 TCTGTAACTACAATTCCCTTCATATGA 58.012 33.333 0.00 0.00 35.50 2.15
556 802 9.265901 CTCTGTAACTACAATTCCCTTCATATG 57.734 37.037 0.00 0.00 35.50 1.78
557 803 8.432805 CCTCTGTAACTACAATTCCCTTCATAT 58.567 37.037 0.00 0.00 35.50 1.78
558 804 7.402071 ACCTCTGTAACTACAATTCCCTTCATA 59.598 37.037 0.00 0.00 35.50 2.15
559 805 6.215636 ACCTCTGTAACTACAATTCCCTTCAT 59.784 38.462 0.00 0.00 35.50 2.57
560 806 5.546499 ACCTCTGTAACTACAATTCCCTTCA 59.454 40.000 0.00 0.00 35.50 3.02
561 807 6.051179 ACCTCTGTAACTACAATTCCCTTC 57.949 41.667 0.00 0.00 35.50 3.46
562 808 6.449830 AACCTCTGTAACTACAATTCCCTT 57.550 37.500 0.00 0.00 35.50 3.95
563 809 6.238648 CAAACCTCTGTAACTACAATTCCCT 58.761 40.000 0.00 0.00 35.50 4.20
564 810 5.414765 CCAAACCTCTGTAACTACAATTCCC 59.585 44.000 0.00 0.00 35.50 3.97
565 811 5.414765 CCCAAACCTCTGTAACTACAATTCC 59.585 44.000 0.00 0.00 35.50 3.01
566 812 5.414765 CCCCAAACCTCTGTAACTACAATTC 59.585 44.000 0.00 0.00 35.50 2.17
567 813 5.321927 CCCCAAACCTCTGTAACTACAATT 58.678 41.667 0.00 0.00 35.50 2.32
568 814 4.263771 CCCCCAAACCTCTGTAACTACAAT 60.264 45.833 0.00 0.00 35.50 2.71
569 815 3.073356 CCCCCAAACCTCTGTAACTACAA 59.927 47.826 0.00 0.00 35.50 2.41
570 816 2.640826 CCCCCAAACCTCTGTAACTACA 59.359 50.000 0.00 0.00 34.56 2.74
571 817 2.641321 ACCCCCAAACCTCTGTAACTAC 59.359 50.000 0.00 0.00 0.00 2.73
572 818 2.994355 ACCCCCAAACCTCTGTAACTA 58.006 47.619 0.00 0.00 0.00 2.24
573 819 1.829138 ACCCCCAAACCTCTGTAACT 58.171 50.000 0.00 0.00 0.00 2.24
574 820 2.670019 AACCCCCAAACCTCTGTAAC 57.330 50.000 0.00 0.00 0.00 2.50
575 821 2.514582 TGAAACCCCCAAACCTCTGTAA 59.485 45.455 0.00 0.00 0.00 2.41
576 822 2.136863 TGAAACCCCCAAACCTCTGTA 58.863 47.619 0.00 0.00 0.00 2.74
577 823 0.930726 TGAAACCCCCAAACCTCTGT 59.069 50.000 0.00 0.00 0.00 3.41
578 824 2.080654 TTGAAACCCCCAAACCTCTG 57.919 50.000 0.00 0.00 0.00 3.35
579 825 2.677914 CTTTGAAACCCCCAAACCTCT 58.322 47.619 0.00 0.00 31.13 3.69
580 826 1.691976 CCTTTGAAACCCCCAAACCTC 59.308 52.381 0.00 0.00 31.13 3.85
581 827 1.694370 CCCTTTGAAACCCCCAAACCT 60.694 52.381 0.00 0.00 31.13 3.50
582 828 0.762418 CCCTTTGAAACCCCCAAACC 59.238 55.000 0.00 0.00 31.13 3.27
583 829 1.796017 TCCCTTTGAAACCCCCAAAC 58.204 50.000 0.00 0.00 31.13 2.93
584 830 2.805290 ATCCCTTTGAAACCCCCAAA 57.195 45.000 0.00 0.00 33.12 3.28
585 831 2.708325 CAAATCCCTTTGAAACCCCCAA 59.292 45.455 0.00 0.00 43.71 4.12
586 832 2.334023 CAAATCCCTTTGAAACCCCCA 58.666 47.619 0.00 0.00 43.71 4.96
587 833 1.628340 CCAAATCCCTTTGAAACCCCC 59.372 52.381 0.00 0.00 43.71 5.40
588 834 1.628340 CCCAAATCCCTTTGAAACCCC 59.372 52.381 0.00 0.00 43.71 4.95
589 835 2.567169 CTCCCAAATCCCTTTGAAACCC 59.433 50.000 0.00 0.00 43.71 4.11
590 836 2.567169 CCTCCCAAATCCCTTTGAAACC 59.433 50.000 0.00 0.00 43.71 3.27
591 837 3.506398 TCCTCCCAAATCCCTTTGAAAC 58.494 45.455 0.00 0.00 43.71 2.78
592 838 3.913370 TCCTCCCAAATCCCTTTGAAA 57.087 42.857 0.00 0.00 43.71 2.69
593 839 4.095946 CAATCCTCCCAAATCCCTTTGAA 58.904 43.478 0.00 0.00 43.71 2.69
594 840 3.336391 TCAATCCTCCCAAATCCCTTTGA 59.664 43.478 0.00 0.00 43.71 2.69
595 841 3.703052 CTCAATCCTCCCAAATCCCTTTG 59.297 47.826 0.00 0.00 41.22 2.77
596 842 3.337909 ACTCAATCCTCCCAAATCCCTTT 59.662 43.478 0.00 0.00 0.00 3.11
597 843 2.929043 ACTCAATCCTCCCAAATCCCTT 59.071 45.455 0.00 0.00 0.00 3.95
598 844 2.243221 CACTCAATCCTCCCAAATCCCT 59.757 50.000 0.00 0.00 0.00 4.20
599 845 2.659428 CACTCAATCCTCCCAAATCCC 58.341 52.381 0.00 0.00 0.00 3.85
600 846 2.242196 TCCACTCAATCCTCCCAAATCC 59.758 50.000 0.00 0.00 0.00 3.01
601 847 3.652057 TCCACTCAATCCTCCCAAATC 57.348 47.619 0.00 0.00 0.00 2.17
602 848 3.309410 CCTTCCACTCAATCCTCCCAAAT 60.309 47.826 0.00 0.00 0.00 2.32
603 849 2.041620 CCTTCCACTCAATCCTCCCAAA 59.958 50.000 0.00 0.00 0.00 3.28
604 850 1.635487 CCTTCCACTCAATCCTCCCAA 59.365 52.381 0.00 0.00 0.00 4.12
605 851 1.203428 TCCTTCCACTCAATCCTCCCA 60.203 52.381 0.00 0.00 0.00 4.37
606 852 1.488393 CTCCTTCCACTCAATCCTCCC 59.512 57.143 0.00 0.00 0.00 4.30
607 853 2.433970 CTCTCCTTCCACTCAATCCTCC 59.566 54.545 0.00 0.00 0.00 4.30
608 854 2.433970 CCTCTCCTTCCACTCAATCCTC 59.566 54.545 0.00 0.00 0.00 3.71
609 855 2.045047 TCCTCTCCTTCCACTCAATCCT 59.955 50.000 0.00 0.00 0.00 3.24
610 856 2.472029 TCCTCTCCTTCCACTCAATCC 58.528 52.381 0.00 0.00 0.00 3.01
611 857 4.163078 TGAATCCTCTCCTTCCACTCAATC 59.837 45.833 0.00 0.00 0.00 2.67
612 858 4.080638 GTGAATCCTCTCCTTCCACTCAAT 60.081 45.833 0.00 0.00 0.00 2.57
613 859 3.261897 GTGAATCCTCTCCTTCCACTCAA 59.738 47.826 0.00 0.00 0.00 3.02
614 860 2.834549 GTGAATCCTCTCCTTCCACTCA 59.165 50.000 0.00 0.00 0.00 3.41
615 861 2.169561 GGTGAATCCTCTCCTTCCACTC 59.830 54.545 0.00 0.00 33.21 3.51
616 862 2.192263 GGTGAATCCTCTCCTTCCACT 58.808 52.381 0.00 0.00 33.21 4.00
617 863 1.909302 TGGTGAATCCTCTCCTTCCAC 59.091 52.381 0.00 0.00 36.37 4.02
618 864 2.342406 TGGTGAATCCTCTCCTTCCA 57.658 50.000 0.00 0.00 36.37 3.53
619 865 3.721087 TTTGGTGAATCCTCTCCTTCC 57.279 47.619 0.00 0.00 36.37 3.46
629 875 4.100035 GGATTTGAGGGGATTTGGTGAATC 59.900 45.833 0.00 0.00 42.84 2.52
630 876 4.033009 GGATTTGAGGGGATTTGGTGAAT 58.967 43.478 0.00 0.00 0.00 2.57
631 877 3.440127 GGATTTGAGGGGATTTGGTGAA 58.560 45.455 0.00 0.00 0.00 3.18
632 878 2.292192 GGGATTTGAGGGGATTTGGTGA 60.292 50.000 0.00 0.00 0.00 4.02
633 879 2.110578 GGGATTTGAGGGGATTTGGTG 58.889 52.381 0.00 0.00 0.00 4.17
634 880 1.008327 GGGGATTTGAGGGGATTTGGT 59.992 52.381 0.00 0.00 0.00 3.67
635 881 1.008206 TGGGGATTTGAGGGGATTTGG 59.992 52.381 0.00 0.00 0.00 3.28
636 882 2.110578 GTGGGGATTTGAGGGGATTTG 58.889 52.381 0.00 0.00 0.00 2.32
637 883 1.008327 GGTGGGGATTTGAGGGGATTT 59.992 52.381 0.00 0.00 0.00 2.17
638 884 0.636647 GGTGGGGATTTGAGGGGATT 59.363 55.000 0.00 0.00 0.00 3.01
639 885 0.554865 TGGTGGGGATTTGAGGGGAT 60.555 55.000 0.00 0.00 0.00 3.85
640 886 1.151474 TGGTGGGGATTTGAGGGGA 60.151 57.895 0.00 0.00 0.00 4.81
641 887 1.000359 GTGGTGGGGATTTGAGGGG 60.000 63.158 0.00 0.00 0.00 4.79
642 888 1.000359 GGTGGTGGGGATTTGAGGG 60.000 63.158 0.00 0.00 0.00 4.30
643 889 1.000359 GGGTGGTGGGGATTTGAGG 60.000 63.158 0.00 0.00 0.00 3.86
644 890 1.000359 GGGGTGGTGGGGATTTGAG 60.000 63.158 0.00 0.00 0.00 3.02
645 891 1.372245 TTGGGGTGGTGGGGATTTGA 61.372 55.000 0.00 0.00 0.00 2.69
646 892 0.252650 ATTGGGGTGGTGGGGATTTG 60.253 55.000 0.00 0.00 0.00 2.32
647 893 0.042581 GATTGGGGTGGTGGGGATTT 59.957 55.000 0.00 0.00 0.00 2.17
648 894 1.703461 GATTGGGGTGGTGGGGATT 59.297 57.895 0.00 0.00 0.00 3.01
649 895 2.324560 GGATTGGGGTGGTGGGGAT 61.325 63.158 0.00 0.00 0.00 3.85
650 896 2.944390 GGATTGGGGTGGTGGGGA 60.944 66.667 0.00 0.00 0.00 4.81
651 897 2.946650 AGGATTGGGGTGGTGGGG 60.947 66.667 0.00 0.00 0.00 4.96
652 898 1.926426 GAGAGGATTGGGGTGGTGGG 61.926 65.000 0.00 0.00 0.00 4.61
653 899 1.207488 TGAGAGGATTGGGGTGGTGG 61.207 60.000 0.00 0.00 0.00 4.61
654 900 0.698238 TTGAGAGGATTGGGGTGGTG 59.302 55.000 0.00 0.00 0.00 4.17
655 901 1.455822 TTTGAGAGGATTGGGGTGGT 58.544 50.000 0.00 0.00 0.00 4.16
656 902 2.834638 ATTTGAGAGGATTGGGGTGG 57.165 50.000 0.00 0.00 0.00 4.61
657 903 3.947834 GTGTATTTGAGAGGATTGGGGTG 59.052 47.826 0.00 0.00 0.00 4.61
658 904 3.852578 AGTGTATTTGAGAGGATTGGGGT 59.147 43.478 0.00 0.00 0.00 4.95
659 905 4.510167 AGTGTATTTGAGAGGATTGGGG 57.490 45.455 0.00 0.00 0.00 4.96
660 906 5.749462 AGAAGTGTATTTGAGAGGATTGGG 58.251 41.667 0.00 0.00 0.00 4.12
661 907 6.763610 GGTAGAAGTGTATTTGAGAGGATTGG 59.236 42.308 0.00 0.00 0.00 3.16
662 908 7.331026 TGGTAGAAGTGTATTTGAGAGGATTG 58.669 38.462 0.00 0.00 0.00 2.67
663 909 7.496346 TGGTAGAAGTGTATTTGAGAGGATT 57.504 36.000 0.00 0.00 0.00 3.01
664 910 7.496346 TTGGTAGAAGTGTATTTGAGAGGAT 57.504 36.000 0.00 0.00 0.00 3.24
665 911 6.928348 TTGGTAGAAGTGTATTTGAGAGGA 57.072 37.500 0.00 0.00 0.00 3.71
666 912 7.824289 TCATTTGGTAGAAGTGTATTTGAGAGG 59.176 37.037 0.00 0.00 0.00 3.69
667 913 8.777865 TCATTTGGTAGAAGTGTATTTGAGAG 57.222 34.615 0.00 0.00 0.00 3.20
668 914 7.824289 CCTCATTTGGTAGAAGTGTATTTGAGA 59.176 37.037 0.00 0.00 0.00 3.27
669 915 7.414540 GCCTCATTTGGTAGAAGTGTATTTGAG 60.415 40.741 0.00 0.00 0.00 3.02
670 916 6.374333 GCCTCATTTGGTAGAAGTGTATTTGA 59.626 38.462 0.00 0.00 0.00 2.69
671 917 6.404734 GGCCTCATTTGGTAGAAGTGTATTTG 60.405 42.308 0.00 0.00 0.00 2.32
672 918 5.652452 GGCCTCATTTGGTAGAAGTGTATTT 59.348 40.000 0.00 0.00 0.00 1.40
673 919 5.044846 AGGCCTCATTTGGTAGAAGTGTATT 60.045 40.000 0.00 0.00 0.00 1.89
674 920 4.475016 AGGCCTCATTTGGTAGAAGTGTAT 59.525 41.667 0.00 0.00 0.00 2.29
675 921 3.844211 AGGCCTCATTTGGTAGAAGTGTA 59.156 43.478 0.00 0.00 0.00 2.90
676 922 2.644798 AGGCCTCATTTGGTAGAAGTGT 59.355 45.455 0.00 0.00 0.00 3.55
677 923 3.356529 AGGCCTCATTTGGTAGAAGTG 57.643 47.619 0.00 0.00 0.00 3.16
678 924 5.514500 TTAAGGCCTCATTTGGTAGAAGT 57.486 39.130 5.23 0.00 0.00 3.01
679 925 7.283329 AGTATTAAGGCCTCATTTGGTAGAAG 58.717 38.462 5.23 0.00 0.00 2.85
680 926 7.208064 AGTATTAAGGCCTCATTTGGTAGAA 57.792 36.000 5.23 0.00 0.00 2.10
681 927 6.824958 AGTATTAAGGCCTCATTTGGTAGA 57.175 37.500 5.23 0.00 0.00 2.59
682 928 9.003658 CATTAGTATTAAGGCCTCATTTGGTAG 57.996 37.037 5.23 0.00 0.00 3.18
683 929 7.942341 CCATTAGTATTAAGGCCTCATTTGGTA 59.058 37.037 5.23 0.00 0.00 3.25
684 930 6.777580 CCATTAGTATTAAGGCCTCATTTGGT 59.222 38.462 5.23 0.00 0.00 3.67
685 931 6.777580 ACCATTAGTATTAAGGCCTCATTTGG 59.222 38.462 5.23 6.73 0.00 3.28
686 932 7.823745 ACCATTAGTATTAAGGCCTCATTTG 57.176 36.000 5.23 0.00 0.00 2.32
687 933 8.058847 TGAACCATTAGTATTAAGGCCTCATTT 58.941 33.333 5.23 0.00 0.00 2.32
688 934 7.502561 GTGAACCATTAGTATTAAGGCCTCATT 59.497 37.037 5.23 0.00 0.00 2.57
689 935 6.998673 GTGAACCATTAGTATTAAGGCCTCAT 59.001 38.462 5.23 3.82 0.00 2.90
690 936 6.354130 GTGAACCATTAGTATTAAGGCCTCA 58.646 40.000 5.23 0.00 0.00 3.86
691 937 5.465724 CGTGAACCATTAGTATTAAGGCCTC 59.534 44.000 5.23 0.00 0.00 4.70
692 938 5.104652 ACGTGAACCATTAGTATTAAGGCCT 60.105 40.000 0.00 0.00 0.00 5.19
693 939 5.121105 ACGTGAACCATTAGTATTAAGGCC 58.879 41.667 0.00 0.00 0.00 5.19
694 940 5.813672 TGACGTGAACCATTAGTATTAAGGC 59.186 40.000 0.00 0.00 0.00 4.35
695 941 7.201582 GGTTGACGTGAACCATTAGTATTAAGG 60.202 40.741 28.95 0.00 44.34 2.69
696 942 7.681903 GGTTGACGTGAACCATTAGTATTAAG 58.318 38.462 28.95 0.00 44.34 1.85
697 943 7.599630 GGTTGACGTGAACCATTAGTATTAA 57.400 36.000 28.95 0.00 44.34 1.40
708 954 1.219522 CGGACTGGTTGACGTGAACC 61.220 60.000 27.55 27.55 45.06 3.62
709 955 0.529119 ACGGACTGGTTGACGTGAAC 60.529 55.000 9.59 9.59 38.24 3.18
710 956 1.817881 ACGGACTGGTTGACGTGAA 59.182 52.632 0.00 0.00 38.24 3.18
711 957 3.528853 ACGGACTGGTTGACGTGA 58.471 55.556 0.00 0.00 38.24 4.35
713 959 0.176219 TTTCACGGACTGGTTGACGT 59.824 50.000 0.00 0.00 40.60 4.34
714 960 0.580104 GTTTCACGGACTGGTTGACG 59.420 55.000 0.00 0.00 0.00 4.35
715 961 0.942252 GGTTTCACGGACTGGTTGAC 59.058 55.000 0.00 0.00 0.00 3.18
716 962 0.179040 GGGTTTCACGGACTGGTTGA 60.179 55.000 0.00 0.00 0.00 3.18
717 963 1.170290 GGGGTTTCACGGACTGGTTG 61.170 60.000 0.00 0.00 0.00 3.77
718 964 1.149854 GGGGTTTCACGGACTGGTT 59.850 57.895 0.00 0.00 0.00 3.67
719 965 2.833957 GGGGTTTCACGGACTGGT 59.166 61.111 0.00 0.00 0.00 4.00
720 966 1.818959 TACGGGGTTTCACGGACTGG 61.819 60.000 0.00 0.00 0.00 4.00
721 967 0.033781 TTACGGGGTTTCACGGACTG 59.966 55.000 0.00 0.00 0.00 3.51
722 968 0.758123 TTTACGGGGTTTCACGGACT 59.242 50.000 0.00 0.00 0.00 3.85
723 969 1.592064 TTTTACGGGGTTTCACGGAC 58.408 50.000 0.00 0.00 0.00 4.79
724 970 2.338577 TTTTTACGGGGTTTCACGGA 57.661 45.000 0.00 0.00 0.00 4.69
725 971 4.762956 TTATTTTTACGGGGTTTCACGG 57.237 40.909 0.00 0.00 0.00 4.94
726 972 5.334319 GGATTATTTTTACGGGGTTTCACG 58.666 41.667 0.00 0.00 0.00 4.35
727 973 5.106197 ACGGATTATTTTTACGGGGTTTCAC 60.106 40.000 0.00 0.00 0.00 3.18
728 974 5.008980 ACGGATTATTTTTACGGGGTTTCA 58.991 37.500 0.00 0.00 0.00 2.69
729 975 5.565592 ACGGATTATTTTTACGGGGTTTC 57.434 39.130 0.00 0.00 0.00 2.78
730 976 5.981088 AACGGATTATTTTTACGGGGTTT 57.019 34.783 0.00 0.00 0.00 3.27
731 977 6.602803 ACATAACGGATTATTTTTACGGGGTT 59.397 34.615 0.00 0.00 0.00 4.11
732 978 6.121590 ACATAACGGATTATTTTTACGGGGT 58.878 36.000 0.00 0.00 0.00 4.95
733 979 6.622833 ACATAACGGATTATTTTTACGGGG 57.377 37.500 0.00 0.00 0.00 5.73
734 980 7.172019 AGCTACATAACGGATTATTTTTACGGG 59.828 37.037 0.00 0.00 0.00 5.28
735 981 8.080083 AGCTACATAACGGATTATTTTTACGG 57.920 34.615 0.00 0.00 0.00 4.02
736 982 7.943065 CGAGCTACATAACGGATTATTTTTACG 59.057 37.037 0.00 0.00 0.00 3.18
737 983 8.758715 ACGAGCTACATAACGGATTATTTTTAC 58.241 33.333 0.00 0.00 0.00 2.01
738 984 8.757789 CACGAGCTACATAACGGATTATTTTTA 58.242 33.333 0.00 0.00 0.00 1.52
739 985 7.493320 TCACGAGCTACATAACGGATTATTTTT 59.507 33.333 0.00 0.00 0.00 1.94
740 986 6.982141 TCACGAGCTACATAACGGATTATTTT 59.018 34.615 0.00 0.00 0.00 1.82
741 987 6.509656 TCACGAGCTACATAACGGATTATTT 58.490 36.000 0.00 0.00 0.00 1.40
742 988 6.080648 TCACGAGCTACATAACGGATTATT 57.919 37.500 0.00 0.00 0.00 1.40
743 989 5.700722 TCACGAGCTACATAACGGATTAT 57.299 39.130 0.00 0.00 0.00 1.28
744 990 5.066893 ACTTCACGAGCTACATAACGGATTA 59.933 40.000 0.00 0.00 0.00 1.75
745 991 4.142227 ACTTCACGAGCTACATAACGGATT 60.142 41.667 0.00 0.00 0.00 3.01
746 992 3.380637 ACTTCACGAGCTACATAACGGAT 59.619 43.478 0.00 0.00 0.00 4.18
747 993 2.751259 ACTTCACGAGCTACATAACGGA 59.249 45.455 0.00 0.00 0.00 4.69
748 994 2.852413 CACTTCACGAGCTACATAACGG 59.148 50.000 0.00 0.00 0.00 4.44
749 995 2.852413 CCACTTCACGAGCTACATAACG 59.148 50.000 0.00 0.00 0.00 3.18
750 996 3.187700 CCCACTTCACGAGCTACATAAC 58.812 50.000 0.00 0.00 0.00 1.89
751 997 2.167693 CCCCACTTCACGAGCTACATAA 59.832 50.000 0.00 0.00 0.00 1.90
752 998 1.754803 CCCCACTTCACGAGCTACATA 59.245 52.381 0.00 0.00 0.00 2.29
753 999 0.537188 CCCCACTTCACGAGCTACAT 59.463 55.000 0.00 0.00 0.00 2.29
754 1000 1.541310 CCCCCACTTCACGAGCTACA 61.541 60.000 0.00 0.00 0.00 2.74
755 1001 1.218316 CCCCCACTTCACGAGCTAC 59.782 63.158 0.00 0.00 0.00 3.58
756 1002 2.656069 GCCCCCACTTCACGAGCTA 61.656 63.158 0.00 0.00 0.00 3.32
757 1003 4.021925 GCCCCCACTTCACGAGCT 62.022 66.667 0.00 0.00 0.00 4.09
758 1004 3.628646 ATGCCCCCACTTCACGAGC 62.629 63.158 0.00 0.00 0.00 5.03
759 1005 0.251916 TAATGCCCCCACTTCACGAG 59.748 55.000 0.00 0.00 0.00 4.18
760 1006 0.035820 GTAATGCCCCCACTTCACGA 60.036 55.000 0.00 0.00 0.00 4.35
761 1007 1.366111 CGTAATGCCCCCACTTCACG 61.366 60.000 0.00 0.00 0.00 4.35
793 1039 2.418976 GGCGGGTAGATCACTGTTTTTC 59.581 50.000 0.00 0.00 0.00 2.29
828 1074 1.474879 GACACGGGAGAGGAAGAGAAG 59.525 57.143 0.00 0.00 0.00 2.85
944 1191 2.203773 AAATGGTGGTGGTGGGGC 60.204 61.111 0.00 0.00 0.00 5.80
960 1207 1.305046 GGGGACTCGAGGTGGAGAA 60.305 63.158 18.41 0.00 37.49 2.87
963 1210 1.911766 GTTGGGGACTCGAGGTGGA 60.912 63.158 18.41 0.00 0.00 4.02
1011 1258 4.150454 AGGAGGAGGAGGAGGCGG 62.150 72.222 0.00 0.00 0.00 6.13
1016 1263 4.095400 GGGCCAGGAGGAGGAGGA 62.095 72.222 4.39 0.00 36.89 3.71
1100 1356 4.828925 GGGACAGCTCGGAGCAGC 62.829 72.222 29.88 18.06 45.56 5.25
1464 1720 2.353406 GCCAACGTAGCTGAGAAGGTAA 60.353 50.000 0.00 0.00 0.00 2.85
1675 1952 3.362693 GCTTGCAACTACTACACGACAAC 60.363 47.826 0.00 0.00 0.00 3.32
1779 2056 2.105006 ATTCAGCGCAGACACAAGAT 57.895 45.000 11.47 0.00 0.00 2.40
1966 2243 5.185442 CGTTCCTAGACCTTCTTAAGTTCCT 59.815 44.000 1.63 0.00 0.00 3.36
1989 2266 2.095768 ACAATTCAAGGTCAACATCGCG 60.096 45.455 0.00 0.00 0.00 5.87
2045 2744 8.026607 CGCAAAATTAGAAAAATAAGTGGGAGA 58.973 33.333 0.00 0.00 0.00 3.71
2137 2844 9.125026 AGAAAGTTGATGATACCAAATATGACC 57.875 33.333 0.00 0.00 0.00 4.02
2345 3083 6.616947 TGTAAAAGTTGTTTCCACTGAACAG 58.383 36.000 0.00 0.00 38.17 3.16
2364 3102 9.290988 TGTAATCTGATACTTGCCTTTTGTAAA 57.709 29.630 0.00 0.00 0.00 2.01
2498 6412 9.467258 GGAACTGCACGTTATATACACTAATAA 57.533 33.333 2.17 0.00 35.56 1.40
2499 6413 8.853126 AGGAACTGCACGTTATATACACTAATA 58.147 33.333 2.17 0.00 37.18 0.98
2684 6598 6.252599 AGATCAACTATATGAGGGCACAAA 57.747 37.500 0.00 0.00 31.76 2.83
2742 6664 9.854668 TCAATACTAGAAGAGAACTATAGCAGT 57.145 33.333 0.00 0.00 40.05 4.40
2997 6929 4.657814 ACCTTGGTGATTGTAGTGGAAT 57.342 40.909 0.00 0.00 0.00 3.01
3141 7073 1.982958 TCCCCACTACCCTTTCTTGAC 59.017 52.381 0.00 0.00 0.00 3.18
3154 7086 7.177878 GGAACATTGATATGATTATCCCCACT 58.822 38.462 0.00 0.00 34.45 4.00
3163 7095 8.365060 TGACCTTTTGGAACATTGATATGATT 57.635 30.769 0.00 0.00 44.07 2.57
3242 7174 6.882140 ACGATATGAACTTTGTGAAACCCATA 59.118 34.615 0.00 0.00 34.36 2.74
3363 7295 0.898320 ACGACTCCATCAGGGACTTG 59.102 55.000 0.00 0.00 42.15 3.16
3390 7322 2.683867 AGATGTTCTACGAAGTCCCTCG 59.316 50.000 0.00 0.00 43.93 4.63
3401 7333 3.963428 ACCCTGACACAGATGTTCTAC 57.037 47.619 0.00 0.00 39.95 2.59
3437 7369 4.891566 CTGTAGGACAGGTCGCAC 57.108 61.111 0.00 0.00 42.35 5.34
3456 7388 2.348411 AGTTGTGTGCTTGCCTAACT 57.652 45.000 0.00 0.00 0.00 2.24
3461 7393 2.514205 ATGAAAGTTGTGTGCTTGCC 57.486 45.000 0.00 0.00 0.00 4.52
3674 7606 8.585881 GTCAGAATAGCTTATGTATGGTAGGAA 58.414 37.037 0.00 0.00 0.00 3.36
3702 7635 6.412362 ACCTGCGATAGAGATAAACTGATT 57.588 37.500 0.00 0.00 39.76 2.57
3704 7637 6.071896 CCATACCTGCGATAGAGATAAACTGA 60.072 42.308 0.00 0.00 39.76 3.41
3705 7638 6.096036 CCATACCTGCGATAGAGATAAACTG 58.904 44.000 0.00 0.00 39.76 3.16
3719 7652 1.945394 ACGTCTACTACCATACCTGCG 59.055 52.381 0.00 0.00 0.00 5.18
3943 7876 3.572682 TCGCGACCTCCTGTAAATATCAT 59.427 43.478 3.71 0.00 0.00 2.45
4109 8043 9.320352 ACATGGGTCACAAATTAAAGTTAAAAC 57.680 29.630 0.00 0.00 0.00 2.43
4113 8047 9.319143 CAAAACATGGGTCACAAATTAAAGTTA 57.681 29.630 0.00 0.00 0.00 2.24
4172 8106 0.671781 CCAGGAACAGCTCGTCCTTG 60.672 60.000 11.40 5.61 0.00 3.61
4337 8271 3.761752 CCAAAGGTAGGGGTTACACATTG 59.238 47.826 0.00 0.00 33.73 2.82
4454 8394 6.152379 AGCAGTAAAAATCAAGCTAAACAGC 58.848 36.000 0.00 0.00 0.00 4.40
4538 8491 8.456471 GGTGTGTAACCTGGAAGATTAAATAAC 58.544 37.037 0.00 0.00 46.55 1.89
4745 8699 9.023962 TGATGCAAGAAAAATCTATAAACTGGT 57.976 29.630 0.00 0.00 0.00 4.00
4746 8700 9.512435 CTGATGCAAGAAAAATCTATAAACTGG 57.488 33.333 0.00 0.00 0.00 4.00
4754 8708 9.679661 TGGTATAACTGATGCAAGAAAAATCTA 57.320 29.630 0.00 0.00 0.00 1.98
4755 8709 8.579850 TGGTATAACTGATGCAAGAAAAATCT 57.420 30.769 0.00 0.00 0.00 2.40
4756 8710 8.462016 ACTGGTATAACTGATGCAAGAAAAATC 58.538 33.333 1.13 0.00 0.00 2.17
4757 8711 8.353423 ACTGGTATAACTGATGCAAGAAAAAT 57.647 30.769 1.13 0.00 0.00 1.82
4758 8712 7.759489 ACTGGTATAACTGATGCAAGAAAAA 57.241 32.000 1.13 0.00 0.00 1.94
4759 8713 7.759489 AACTGGTATAACTGATGCAAGAAAA 57.241 32.000 1.13 0.00 0.00 2.29
4760 8714 7.759489 AAACTGGTATAACTGATGCAAGAAA 57.241 32.000 1.13 0.00 0.00 2.52
4762 8716 9.764363 CTATAAACTGGTATAACTGATGCAAGA 57.236 33.333 1.13 0.00 0.00 3.02
4763 8717 9.764363 TCTATAAACTGGTATAACTGATGCAAG 57.236 33.333 1.13 0.00 0.00 4.01
4764 8718 9.542462 GTCTATAAACTGGTATAACTGATGCAA 57.458 33.333 1.13 0.00 0.00 4.08
4765 8719 8.924303 AGTCTATAAACTGGTATAACTGATGCA 58.076 33.333 1.13 0.00 0.00 3.96
4766 8720 9.197694 CAGTCTATAAACTGGTATAACTGATGC 57.802 37.037 1.13 0.00 42.42 3.91
4802 8756 7.093354 TGAAATCTACAGACACAGAGAATGTC 58.907 38.462 0.00 0.00 45.70 3.06
4808 8762 8.441608 CAAAATCTGAAATCTACAGACACAGAG 58.558 37.037 0.00 0.00 45.19 3.35
4878 8832 3.469739 AGTACCCACAACTTTGGTAACG 58.530 45.455 0.00 0.00 36.44 3.18
5225 9182 5.183228 ACCATGTAAACCTTGGATAACGAG 58.817 41.667 6.27 0.00 40.10 4.18
5226 9183 5.168647 ACCATGTAAACCTTGGATAACGA 57.831 39.130 6.27 0.00 40.10 3.85
5227 9184 7.562454 AATACCATGTAAACCTTGGATAACG 57.438 36.000 6.27 0.00 40.10 3.18
5228 9185 8.126700 CGAAATACCATGTAAACCTTGGATAAC 58.873 37.037 6.27 0.00 40.10 1.89
5229 9186 7.830201 ACGAAATACCATGTAAACCTTGGATAA 59.170 33.333 6.27 0.00 40.10 1.75
5277 9235 3.648507 AGCAGCTCAGATCTTTTGGAT 57.351 42.857 0.00 0.00 37.37 3.41
5294 9252 0.685785 TGCCCAGTCAAACCAAAGCA 60.686 50.000 0.00 0.00 0.00 3.91
5298 9256 1.133513 ACATCTGCCCAGTCAAACCAA 60.134 47.619 0.00 0.00 0.00 3.67
5338 9296 0.391528 CCACACATGCTGGATCGTGA 60.392 55.000 14.80 0.00 33.56 4.35
5348 9306 0.895100 TTCAAGCTCCCCACACATGC 60.895 55.000 0.00 0.00 0.00 4.06
5435 9393 5.420409 GCTATCTAGTGTTGTTTAGTGGCT 58.580 41.667 0.00 0.00 0.00 4.75
5496 9454 3.428746 GCTGAGAGCGACAGATTTAGA 57.571 47.619 10.90 0.00 37.54 2.10
5570 9528 3.181475 GCCGTAGAACAGGATCTTCATCA 60.181 47.826 0.00 0.00 0.00 3.07
5678 9636 1.747206 GCCACAAGACCACTGAACACT 60.747 52.381 0.00 0.00 0.00 3.55
5723 9681 3.359523 CAGCGAGCAAGCAAGCCA 61.360 61.111 6.21 0.00 40.15 4.75
5724 9682 4.773117 GCAGCGAGCAAGCAAGCC 62.773 66.667 6.21 0.00 44.79 4.35
5876 9839 2.736144 TCTGTATGACCAACCACGAC 57.264 50.000 0.00 0.00 0.00 4.34
5966 9929 6.793492 ATGAGAGAAAAGACAAGCAGTAAC 57.207 37.500 0.00 0.00 0.00 2.50
5988 9951 9.573133 GAATCAATAGACGACATTTTCCAAAAT 57.427 29.630 0.00 0.00 39.07 1.82
5992 9955 7.680442 TTGAATCAATAGACGACATTTTCCA 57.320 32.000 0.00 0.00 0.00 3.53
6073 10037 9.521841 AGATGTATCTCGATATTCACTTCCTTA 57.478 33.333 0.00 0.00 29.30 2.69
6208 10172 4.605640 ATGGTGAAAGTTGGGATTGTTG 57.394 40.909 0.00 0.00 0.00 3.33
6229 10193 1.067142 ACCGTTGCATAGCTTCTCGAA 60.067 47.619 0.00 0.00 0.00 3.71
6362 10326 0.730840 GGGGCTGATTTTACGAACGG 59.269 55.000 0.00 0.00 0.00 4.44
6364 10328 1.743394 CAGGGGGCTGATTTTACGAAC 59.257 52.381 0.00 0.00 0.00 3.95
6465 10429 7.378181 TCCTTTCCTTCAAAAATCATTACAGC 58.622 34.615 0.00 0.00 0.00 4.40
6466 10430 9.933723 ATTCCTTTCCTTCAAAAATCATTACAG 57.066 29.630 0.00 0.00 0.00 2.74
6549 10513 4.029809 GTACGCAGCCCCCAACCT 62.030 66.667 0.00 0.00 0.00 3.50
6552 10516 3.479127 AAACGTACGCAGCCCCCAA 62.479 57.895 16.72 0.00 0.00 4.12
6661 10660 2.628178 CCTAGGTCCATAGCATCGTCAA 59.372 50.000 0.00 0.00 0.00 3.18
6662 10661 2.158519 TCCTAGGTCCATAGCATCGTCA 60.159 50.000 9.08 0.00 0.00 4.35
6663 10662 2.229302 GTCCTAGGTCCATAGCATCGTC 59.771 54.545 9.08 0.00 0.00 4.20
6664 10663 2.240279 GTCCTAGGTCCATAGCATCGT 58.760 52.381 9.08 0.00 0.00 3.73
6665 10664 2.230025 CTGTCCTAGGTCCATAGCATCG 59.770 54.545 9.08 0.00 0.00 3.84
6666 10665 2.564947 CCTGTCCTAGGTCCATAGCATC 59.435 54.545 9.08 0.00 42.00 3.91
6667 10666 2.614259 CCTGTCCTAGGTCCATAGCAT 58.386 52.381 9.08 0.00 42.00 3.79
6668 10667 1.413082 CCCTGTCCTAGGTCCATAGCA 60.413 57.143 9.08 0.00 45.80 3.49
6669 10668 1.343069 CCCTGTCCTAGGTCCATAGC 58.657 60.000 9.08 0.00 45.80 2.97
6670 10669 2.599677 GACCCTGTCCTAGGTCCATAG 58.400 57.143 9.08 0.00 45.76 2.23
6671 10670 2.769602 GACCCTGTCCTAGGTCCATA 57.230 55.000 9.08 0.00 45.76 2.74
6672 10671 3.637065 GACCCTGTCCTAGGTCCAT 57.363 57.895 9.08 0.00 45.76 3.41
6676 10675 1.413227 GCCTATGACCCTGTCCTAGGT 60.413 57.143 19.91 0.00 45.91 3.08
6677 10676 1.343069 GCCTATGACCCTGTCCTAGG 58.657 60.000 16.64 16.64 46.48 3.02
6678 10677 1.133009 AGGCCTATGACCCTGTCCTAG 60.133 57.143 1.29 0.00 32.95 3.02
6679 10678 0.941963 AGGCCTATGACCCTGTCCTA 59.058 55.000 1.29 0.00 0.00 2.94
6680 10679 0.692419 CAGGCCTATGACCCTGTCCT 60.692 60.000 3.98 0.00 42.87 3.85
6681 10680 0.691078 TCAGGCCTATGACCCTGTCC 60.691 60.000 3.98 0.00 46.83 4.02
6682 10681 0.466124 GTCAGGCCTATGACCCTGTC 59.534 60.000 3.98 0.00 46.83 3.51
6683 10682 2.609046 GTCAGGCCTATGACCCTGT 58.391 57.895 3.98 0.00 46.83 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.