Multiple sequence alignment - TraesCS3B01G310400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G310400 chr3B 100.000 5616 0 0 1 5616 499163658 499169273 0.000000e+00 10371.0
1 TraesCS3B01G310400 chr3B 97.222 180 5 0 1589 1768 499165192 499165371 7.070000e-79 305.0
2 TraesCS3B01G310400 chr3B 97.222 180 5 0 1535 1714 499165246 499165425 7.070000e-79 305.0
3 TraesCS3B01G310400 chr3B 94.857 175 9 0 3974 4148 257839274 257839100 1.990000e-69 274.0
4 TraesCS3B01G310400 chr3B 96.825 126 4 0 1643 1768 499165192 499165317 1.590000e-50 211.0
5 TraesCS3B01G310400 chr3B 96.825 126 4 0 1535 1660 499165300 499165425 1.590000e-50 211.0
6 TraesCS3B01G310400 chr3B 97.222 72 2 0 1697 1768 499165192 499165263 7.640000e-24 122.0
7 TraesCS3B01G310400 chr3B 97.222 72 2 0 1535 1606 499165354 499165425 7.640000e-24 122.0
8 TraesCS3B01G310400 chr3A 97.098 1895 33 3 1703 3593 506433855 506435731 0.000000e+00 3175.0
9 TraesCS3B01G310400 chr3A 96.703 910 28 2 768 1675 506432645 506433554 0.000000e+00 1513.0
10 TraesCS3B01G310400 chr3A 94.726 929 30 5 4143 5052 506435900 506436828 0.000000e+00 1426.0
11 TraesCS3B01G310400 chr3A 91.078 538 18 10 5103 5616 506436823 506437354 0.000000e+00 701.0
12 TraesCS3B01G310400 chr3A 88.100 521 50 5 1 510 506431742 506432261 4.810000e-170 608.0
13 TraesCS3B01G310400 chr3A 95.676 185 8 0 3796 3980 506435721 506435905 1.180000e-76 298.0
14 TraesCS3B01G310400 chr3A 94.505 182 9 1 3973 4153 518897171 518897352 4.280000e-71 279.0
15 TraesCS3B01G310400 chr3A 95.745 141 6 0 1589 1729 506433414 506433554 1.570000e-55 228.0
16 TraesCS3B01G310400 chr3A 96.032 126 5 0 1643 1768 506433414 506433539 7.380000e-49 206.0
17 TraesCS3B01G310400 chr3A 96.552 87 3 0 1535 1621 506433468 506433554 1.630000e-30 145.0
18 TraesCS3B01G310400 chr3A 100.000 66 0 0 1649 1714 506433855 506433920 7.640000e-24 122.0
19 TraesCS3B01G310400 chr3A 98.485 66 1 0 1541 1606 506433855 506433920 3.550000e-22 117.0
20 TraesCS3B01G310400 chr3A 98.485 66 1 0 1595 1660 506433855 506433920 3.550000e-22 117.0
21 TraesCS3B01G310400 chr3A 95.775 71 3 0 1697 1767 506433414 506433484 1.280000e-21 115.0
22 TraesCS3B01G310400 chr3D 96.632 1811 49 2 1784 3593 383535173 383536972 0.000000e+00 2996.0
23 TraesCS3B01G310400 chr3D 91.320 1417 57 16 4246 5616 383539982 383541378 0.000000e+00 1875.0
24 TraesCS3B01G310400 chr3D 94.782 1054 43 7 634 1675 383533878 383534931 0.000000e+00 1631.0
25 TraesCS3B01G310400 chr3D 94.709 189 8 1 3796 3982 383536962 383537150 5.500000e-75 292.0
26 TraesCS3B01G310400 chr3D 94.118 170 7 1 4144 4313 383537149 383537315 7.220000e-64 255.0
27 TraesCS3B01G310400 chr3D 95.035 141 7 0 1589 1729 383534791 383534931 7.320000e-54 222.0
28 TraesCS3B01G310400 chr3D 94.444 126 7 0 1643 1768 383534791 383534916 1.600000e-45 195.0
29 TraesCS3B01G310400 chr3D 80.672 238 27 6 3588 3806 392686434 392686197 3.480000e-37 167.0
30 TraesCS3B01G310400 chr3D 89.844 128 12 1 3587 3713 104811449 104811322 4.500000e-36 163.0
31 TraesCS3B01G310400 chr3D 96.552 87 3 0 1535 1621 383534845 383534931 1.630000e-30 145.0
32 TraesCS3B01G310400 chr3D 94.444 72 4 0 1697 1768 383534791 383534862 1.650000e-20 111.0
33 TraesCS3B01G310400 chr5D 97.590 166 4 0 3980 4145 386859457 386859292 9.210000e-73 285.0
34 TraesCS3B01G310400 chr5D 96.471 170 6 0 3980 4149 48669131 48668962 1.190000e-71 281.0
35 TraesCS3B01G310400 chr5D 80.816 245 23 5 3588 3808 7947092 7946848 2.690000e-38 171.0
36 TraesCS3B01G310400 chr5A 95.954 173 6 1 3977 4148 389723267 389723439 4.280000e-71 279.0
37 TraesCS3B01G310400 chr5A 95.429 175 7 1 3981 4154 630923893 630923719 1.540000e-70 278.0
38 TraesCS3B01G310400 chr4D 95.930 172 7 0 3981 4152 23005394 23005223 4.280000e-71 279.0
39 TraesCS3B01G310400 chr6D 93.956 182 9 2 3965 4146 289352879 289352700 1.990000e-69 274.0
40 TraesCS3B01G310400 chr2B 94.382 178 8 2 3968 4145 134045736 134045911 7.170000e-69 272.0
41 TraesCS3B01G310400 chr2B 87.591 137 17 0 3581 3717 374677153 374677017 5.820000e-35 159.0
42 TraesCS3B01G310400 chr2B 84.967 153 18 3 3588 3736 596013622 596013773 3.500000e-32 150.0
43 TraesCS3B01G310400 chr2B 85.593 118 14 3 3718 3833 789508505 789508389 2.750000e-23 121.0
44 TraesCS3B01G310400 chr7D 84.821 224 25 9 3585 3803 620000033 620000252 3.410000e-52 217.0
45 TraesCS3B01G310400 chr7D 87.324 142 16 2 3573 3713 418139095 418139235 1.620000e-35 161.0
46 TraesCS3B01G310400 chr7B 80.455 220 37 3 3589 3804 188593944 188594161 4.500000e-36 163.0
47 TraesCS3B01G310400 chr2D 80.328 244 23 6 3585 3803 647839450 647839693 1.620000e-35 161.0
48 TraesCS3B01G310400 chr2D 84.277 159 19 6 3586 3741 549879856 549880011 3.500000e-32 150.0
49 TraesCS3B01G310400 chr6B 80.408 245 19 11 3589 3806 356117450 356117208 5.820000e-35 159.0
50 TraesCS3B01G310400 chr4B 82.558 172 21 8 3633 3803 1087144 1087307 5.860000e-30 143.0
51 TraesCS3B01G310400 chr4B 75.333 150 33 4 5457 5604 85235050 85235197 1.010000e-07 69.4
52 TraesCS3B01G310400 chr5B 94.444 90 5 0 3716 3805 308637426 308637515 7.590000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G310400 chr3B 499163658 499169273 5615 False 10371.000000 10371 100.000000 1 5616 1 chr3B.!!$F1 5615
1 TraesCS3B01G310400 chr3A 506431742 506437354 5612 False 674.692308 3175 95.727308 1 5616 13 chr3A.!!$F2 5615
2 TraesCS3B01G310400 chr3D 383533878 383541378 7500 False 858.000000 2996 94.670667 634 5616 9 chr3D.!!$F1 4982

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
119 122 0.531974 TGTCACTTGTCTTGCGACCC 60.532 55.000 0.00 0.0 39.47 4.46 F
1677 1818 0.321564 TTGACAAGCCGGATGTGAGG 60.322 55.000 16.92 0.0 0.00 3.86 F
1697 1838 0.250295 CGGTGGAACAAGCAAGAGGA 60.250 55.000 0.00 0.0 44.16 3.71 F
1701 1842 0.250338 GGAACAAGCAAGAGGACCGT 60.250 55.000 0.00 0.0 0.00 4.83 F
1716 2130 1.002087 GACCGTGGTGAGAGGTTTGAT 59.998 52.381 0.00 0.0 38.57 2.57 F
1822 2477 1.239347 GTGGAACAAGCAAGAGGACC 58.761 55.000 0.00 0.0 44.16 4.46 F
3605 4264 0.998145 AGTACTACCTCCGTCCTGGT 59.002 55.000 0.00 0.0 39.52 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1690 1831 0.244994 CTCTCACCACGGTCCTCTTG 59.755 60.000 0.0 0.0 0.00 3.02 R
3188 3843 0.104487 CCTGCACACAATTTGCCACA 59.896 50.000 0.0 0.0 39.39 4.17 R
3595 4254 1.279846 GGACCAATAAACCAGGACGGA 59.720 52.381 0.0 0.0 38.63 4.69 R
3596 4255 1.680860 GGGACCAATAAACCAGGACGG 60.681 57.143 0.0 0.0 42.50 4.79 R
3597 4256 1.746470 GGGACCAATAAACCAGGACG 58.254 55.000 0.0 0.0 0.00 4.79 R
3785 4444 0.998145 AGTACTACCTCCGTCCTGGT 59.002 55.000 0.0 0.0 39.52 4.00 R
5419 8926 0.034670 CCCTGAGCCAGAAAGGAAGG 60.035 60.000 4.0 0.0 41.22 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 71 6.252655 GCAAATGTATTTATCCGTTGTTGTCC 59.747 38.462 0.00 0.00 0.00 4.02
69 72 7.309177 CAAATGTATTTATCCGTTGTTGTCCA 58.691 34.615 0.00 0.00 0.00 4.02
100 103 1.308047 TGCACGTGCTTGTCTTTCAT 58.692 45.000 37.59 0.00 42.66 2.57
103 106 2.908634 CACGTGCTTGTCTTTCATGTC 58.091 47.619 0.82 0.00 0.00 3.06
114 117 4.035558 TGTCTTTCATGTCACTTGTCTTGC 59.964 41.667 0.00 0.00 0.00 4.01
119 122 0.531974 TGTCACTTGTCTTGCGACCC 60.532 55.000 0.00 0.00 39.47 4.46
120 123 1.300620 TCACTTGTCTTGCGACCCG 60.301 57.895 0.00 0.00 39.47 5.28
155 158 3.447752 TGCGACGAATGTGTATTTGTG 57.552 42.857 0.00 0.00 40.27 3.33
157 160 2.769376 CGACGAATGTGTATTTGTGGC 58.231 47.619 0.00 0.00 40.27 5.01
163 166 1.154301 GTGTATTTGTGGCGTGCCG 60.154 57.895 6.37 0.00 39.42 5.69
177 181 1.000717 CGTGCCGAGGATTTTGGTTTT 60.001 47.619 0.00 0.00 32.26 2.43
178 182 2.403259 GTGCCGAGGATTTTGGTTTTG 58.597 47.619 0.00 0.00 32.26 2.44
184 188 3.181480 CGAGGATTTTGGTTTTGTGTGGT 60.181 43.478 0.00 0.00 0.00 4.16
195 199 6.045318 TGGTTTTGTGTGGTATGTTCAAATG 58.955 36.000 0.00 0.00 0.00 2.32
197 201 6.200097 GGTTTTGTGTGGTATGTTCAAATGTC 59.800 38.462 0.00 0.00 0.00 3.06
198 202 6.456795 TTTGTGTGGTATGTTCAAATGTCA 57.543 33.333 0.00 0.00 0.00 3.58
200 204 4.277174 TGTGTGGTATGTTCAAATGTCACC 59.723 41.667 0.00 0.00 0.00 4.02
201 205 3.500299 TGTGGTATGTTCAAATGTCACCG 59.500 43.478 0.00 0.00 0.00 4.94
202 206 3.078097 TGGTATGTTCAAATGTCACCGG 58.922 45.455 0.00 0.00 0.00 5.28
222 228 2.178580 GGATTTTTGGCAGGGTCATGA 58.821 47.619 0.00 0.00 0.00 3.07
231 237 3.523157 TGGCAGGGTCATGAGAGAAAATA 59.477 43.478 0.00 0.00 0.00 1.40
236 242 5.591472 CAGGGTCATGAGAGAAAATATTGCA 59.409 40.000 0.00 0.00 0.00 4.08
254 260 6.573664 ATTGCAACAATACCGCATACATAT 57.426 33.333 0.00 0.00 35.19 1.78
262 268 8.851960 ACAATACCGCATACATATAACGATAG 57.148 34.615 0.00 0.00 46.19 2.08
304 316 7.213178 ACATTGGGAATCTATGGACTTAAGT 57.787 36.000 8.13 8.13 33.82 2.24
315 327 4.967084 TGGACTTAAGTAAGAGTTGGCA 57.033 40.909 8.42 0.00 37.08 4.92
333 345 2.275318 GCATGTGGAGTTGTCTAGAGC 58.725 52.381 0.00 0.00 0.00 4.09
353 365 7.704578 AGAGCTGTAGAGTTGATTGTAGTTA 57.295 36.000 0.00 0.00 0.00 2.24
363 375 9.429359 AGAGTTGATTGTAGTTACTTGAAGATG 57.571 33.333 0.00 0.00 0.00 2.90
398 410 2.844946 TGAATTTCAGGACTTGCACGA 58.155 42.857 0.00 0.00 0.00 4.35
405 417 1.939934 CAGGACTTGCACGAAGTTGAA 59.060 47.619 0.00 0.00 45.48 2.69
432 444 6.479001 GCAATTGCTTGAAGCTATCATTTCAT 59.521 34.615 23.21 0.00 42.97 2.57
433 445 7.516785 GCAATTGCTTGAAGCTATCATTTCATG 60.517 37.037 23.21 10.15 42.97 3.07
459 471 4.518249 TGAGTGTATTCACAACAACCACA 58.482 39.130 5.21 0.00 46.01 4.17
460 472 4.944317 TGAGTGTATTCACAACAACCACAA 59.056 37.500 5.21 0.00 46.01 3.33
484 496 1.076485 GTGGGCTCCATCCTTGCAT 60.076 57.895 0.00 0.00 35.28 3.96
494 506 5.643379 TCCATCCTTGCATGAAAAGTAAC 57.357 39.130 0.00 0.00 0.00 2.50
500 512 5.774690 TCCTTGCATGAAAAGTAACTCCAAT 59.225 36.000 0.00 0.00 0.00 3.16
510 522 9.747898 TGAAAAGTAACTCCAATACCAACATAT 57.252 29.630 0.00 0.00 0.00 1.78
512 524 9.975218 AAAAGTAACTCCAATACCAACATATCT 57.025 29.630 0.00 0.00 0.00 1.98
513 525 9.975218 AAAGTAACTCCAATACCAACATATCTT 57.025 29.630 0.00 0.00 0.00 2.40
514 526 8.964476 AGTAACTCCAATACCAACATATCTTG 57.036 34.615 0.00 0.00 0.00 3.02
515 527 6.699575 AACTCCAATACCAACATATCTTGC 57.300 37.500 0.00 0.00 0.00 4.01
516 528 5.754782 ACTCCAATACCAACATATCTTGCA 58.245 37.500 0.00 0.00 0.00 4.08
517 529 6.186957 ACTCCAATACCAACATATCTTGCAA 58.813 36.000 0.00 0.00 0.00 4.08
518 530 6.095440 ACTCCAATACCAACATATCTTGCAAC 59.905 38.462 0.00 0.00 0.00 4.17
521 585 6.183360 CCAATACCAACATATCTTGCAACCAT 60.183 38.462 0.00 0.00 0.00 3.55
544 608 1.721664 TTGTCGAGTAGGCCGATCCG 61.722 60.000 0.00 0.00 40.77 4.18
558 622 2.061773 CGATCCGCGCTCAAGAAATAT 58.938 47.619 5.56 0.00 0.00 1.28
559 623 2.476619 CGATCCGCGCTCAAGAAATATT 59.523 45.455 5.56 0.00 0.00 1.28
560 624 3.662713 CGATCCGCGCTCAAGAAATATTG 60.663 47.826 5.56 0.00 0.00 1.90
564 628 2.351418 CGCGCTCAAGAAATATTGTGGA 59.649 45.455 5.56 0.00 0.00 4.02
568 632 6.310197 GCGCTCAAGAAATATTGTGGATATC 58.690 40.000 0.00 0.00 30.50 1.63
597 663 6.012858 TCCTCTAAATGACCCTTTTCTAAGCA 60.013 38.462 0.00 0.00 0.00 3.91
627 694 5.118729 TCACCAACCTCTCCAAAAACTTA 57.881 39.130 0.00 0.00 0.00 2.24
637 704 7.037153 ACCTCTCCAAAAACTTATACCCACATA 60.037 37.037 0.00 0.00 0.00 2.29
662 729 7.913674 TGGCTTTTTAAAATTGTGTCAAACT 57.086 28.000 0.55 0.00 0.00 2.66
683 750 5.804639 ACTGTTTGGCATGTCTAATACAGA 58.195 37.500 16.88 0.00 42.70 3.41
684 751 6.418101 ACTGTTTGGCATGTCTAATACAGAT 58.582 36.000 16.88 3.11 42.70 2.90
692 760 6.294010 GGCATGTCTAATACAGATAGTGACGA 60.294 42.308 0.00 0.00 42.70 4.20
713 781 0.909610 TCGGCATCTCTTTGAGGGGT 60.910 55.000 0.00 0.00 0.00 4.95
728 797 2.238898 GAGGGGTAAGTGGTGTGCTTAT 59.761 50.000 0.00 0.00 32.01 1.73
729 798 3.453353 GAGGGGTAAGTGGTGTGCTTATA 59.547 47.826 0.00 0.00 32.01 0.98
731 800 4.477213 AGGGGTAAGTGGTGTGCTTATAAT 59.523 41.667 0.00 0.00 32.01 1.28
732 801 5.668535 AGGGGTAAGTGGTGTGCTTATAATA 59.331 40.000 0.00 0.00 32.01 0.98
733 802 5.761726 GGGGTAAGTGGTGTGCTTATAATAC 59.238 44.000 0.00 0.00 32.01 1.89
773 904 7.689299 TCAGGGATAAGAATACATATTGTGGG 58.311 38.462 0.00 0.00 0.00 4.61
774 905 6.886459 CAGGGATAAGAATACATATTGTGGGG 59.114 42.308 0.00 0.00 0.00 4.96
775 906 6.011628 AGGGATAAGAATACATATTGTGGGGG 60.012 42.308 0.00 0.00 0.00 5.40
799 939 3.076621 TCCTGAGACATGTGACAAATGC 58.923 45.455 1.15 0.00 0.00 3.56
916 1057 1.387295 ATCTCAGCGCGTCATCCTCA 61.387 55.000 8.43 0.00 0.00 3.86
965 1106 3.611674 CCGCCCAAAACCCCACAC 61.612 66.667 0.00 0.00 0.00 3.82
1033 1174 1.920325 CTCTCCAAGTCCCAGCCCA 60.920 63.158 0.00 0.00 0.00 5.36
1224 1365 2.376109 GGACATAGGGTCTCGTTCTCA 58.624 52.381 0.00 0.00 46.16 3.27
1284 1425 2.683572 TCGCTCCCTTGGCTAGCA 60.684 61.111 18.24 0.00 35.98 3.49
1287 1428 2.202987 CTCCCTTGGCTAGCAGCG 60.203 66.667 18.24 3.17 43.62 5.18
1509 1650 2.702847 GGATAAGTTCCGGCGCAAT 58.297 52.632 10.83 0.00 33.93 3.56
1557 1698 2.290641 CCGTGGTGAGAGGTTTGAAAAG 59.709 50.000 0.00 0.00 0.00 2.27
1605 1746 0.763223 AGGACCGTGGTGAGAGGTTT 60.763 55.000 0.00 0.00 38.57 3.27
1631 1772 2.187946 GGATGTGAGGCGGTGGAG 59.812 66.667 0.00 0.00 0.00 3.86
1665 1806 1.867233 CGTGGTGAGAGGTTTGACAAG 59.133 52.381 0.00 0.00 0.00 3.16
1675 1816 1.234821 GTTTGACAAGCCGGATGTGA 58.765 50.000 16.92 6.94 0.00 3.58
1676 1817 1.197721 GTTTGACAAGCCGGATGTGAG 59.802 52.381 16.92 0.00 0.00 3.51
1677 1818 0.321564 TTGACAAGCCGGATGTGAGG 60.322 55.000 16.92 0.00 0.00 3.86
1683 1824 4.838152 CCGGATGTGAGGCGGTGG 62.838 72.222 0.00 0.00 0.00 4.61
1684 1825 3.770040 CGGATGTGAGGCGGTGGA 61.770 66.667 0.00 0.00 0.00 4.02
1685 1826 2.668632 GGATGTGAGGCGGTGGAA 59.331 61.111 0.00 0.00 0.00 3.53
1686 1827 1.745489 GGATGTGAGGCGGTGGAAC 60.745 63.158 0.00 0.00 0.00 3.62
1687 1828 1.003839 GATGTGAGGCGGTGGAACA 60.004 57.895 0.00 0.00 39.98 3.18
1688 1829 0.605319 GATGTGAGGCGGTGGAACAA 60.605 55.000 0.00 0.00 44.16 2.83
1689 1830 0.606401 ATGTGAGGCGGTGGAACAAG 60.606 55.000 0.00 0.00 44.16 3.16
1690 1831 2.281484 TGAGGCGGTGGAACAAGC 60.281 61.111 0.00 0.00 44.16 4.01
1691 1832 2.281484 GAGGCGGTGGAACAAGCA 60.281 61.111 0.00 0.00 44.16 3.91
1692 1833 1.896660 GAGGCGGTGGAACAAGCAA 60.897 57.895 0.00 0.00 44.16 3.91
1693 1834 1.856265 GAGGCGGTGGAACAAGCAAG 61.856 60.000 0.00 0.00 44.16 4.01
1694 1835 1.896660 GGCGGTGGAACAAGCAAGA 60.897 57.895 0.00 0.00 44.16 3.02
1695 1836 1.576421 GCGGTGGAACAAGCAAGAG 59.424 57.895 0.00 0.00 44.16 2.85
1696 1837 1.856265 GCGGTGGAACAAGCAAGAGG 61.856 60.000 0.00 0.00 44.16 3.69
1697 1838 0.250295 CGGTGGAACAAGCAAGAGGA 60.250 55.000 0.00 0.00 44.16 3.71
1698 1839 1.239347 GGTGGAACAAGCAAGAGGAC 58.761 55.000 0.00 0.00 44.16 3.85
1699 1840 1.239347 GTGGAACAAGCAAGAGGACC 58.761 55.000 0.00 0.00 44.16 4.46
1700 1841 0.250295 TGGAACAAGCAAGAGGACCG 60.250 55.000 0.00 0.00 31.92 4.79
1701 1842 0.250338 GGAACAAGCAAGAGGACCGT 60.250 55.000 0.00 0.00 0.00 4.83
1716 2130 1.002087 GACCGTGGTGAGAGGTTTGAT 59.998 52.381 0.00 0.00 38.57 2.57
1752 2166 1.611673 CGGTGGAACAAGCAAGAGGAT 60.612 52.381 0.00 0.00 44.16 3.24
1822 2477 1.239347 GTGGAACAAGCAAGAGGACC 58.761 55.000 0.00 0.00 44.16 4.46
2307 2962 2.606725 CGCTAAGAACTCTGCTCCATTG 59.393 50.000 0.00 0.00 0.00 2.82
2645 3300 9.847224 GGAAGAAGGTGATAATTATTCAGGTAA 57.153 33.333 0.00 0.00 30.17 2.85
3075 3730 3.616956 ATGTCTATGATGTATGGGCCG 57.383 47.619 0.00 0.00 0.00 6.13
3118 3773 5.482908 CAAGTCACAGTAGCTAGGAATGTT 58.517 41.667 0.00 0.00 0.00 2.71
3252 3907 5.300034 TGTCAATTGCAGATACATGATTCCC 59.700 40.000 0.00 0.00 0.00 3.97
3324 3982 5.476599 TGGAACACACATTAAAAGAGGATGG 59.523 40.000 0.00 0.00 0.00 3.51
3355 4013 6.481134 CAAGACCATCATTCTGTTGTTATCG 58.519 40.000 0.00 0.00 0.00 2.92
3446 4105 8.579850 AGGTGAAATATTCTGCTTGATTGTTA 57.420 30.769 0.00 0.00 0.00 2.41
3500 4159 2.428890 AGACTTGATCACCGATCCTGTC 59.571 50.000 0.00 13.74 38.20 3.51
3524 4183 5.233902 CGAGTGTTGAAAATTCCAATTGCAA 59.766 36.000 0.00 0.00 0.00 4.08
3604 4263 2.570135 GTAGTACTACCTCCGTCCTGG 58.430 57.143 20.47 0.00 40.09 4.45
3605 4264 0.998145 AGTACTACCTCCGTCCTGGT 59.002 55.000 0.00 0.00 39.52 4.00
3606 4265 1.357079 AGTACTACCTCCGTCCTGGTT 59.643 52.381 0.00 0.00 39.52 3.67
3607 4266 2.174360 GTACTACCTCCGTCCTGGTTT 58.826 52.381 0.00 0.00 39.52 3.27
3608 4267 2.610438 ACTACCTCCGTCCTGGTTTA 57.390 50.000 0.00 0.00 39.52 2.01
3609 4268 3.111741 ACTACCTCCGTCCTGGTTTAT 57.888 47.619 0.00 0.00 39.52 1.40
3610 4269 3.447950 ACTACCTCCGTCCTGGTTTATT 58.552 45.455 0.00 0.00 39.52 1.40
3611 4270 2.781681 ACCTCCGTCCTGGTTTATTG 57.218 50.000 0.00 0.00 39.52 1.90
3612 4271 1.280998 ACCTCCGTCCTGGTTTATTGG 59.719 52.381 0.00 0.00 39.52 3.16
3613 4272 1.280998 CCTCCGTCCTGGTTTATTGGT 59.719 52.381 0.00 0.00 39.52 3.67
3614 4273 2.629051 CTCCGTCCTGGTTTATTGGTC 58.371 52.381 0.00 0.00 39.52 4.02
3615 4274 1.279846 TCCGTCCTGGTTTATTGGTCC 59.720 52.381 0.00 0.00 39.52 4.46
3616 4275 1.680860 CCGTCCTGGTTTATTGGTCCC 60.681 57.143 0.00 0.00 0.00 4.46
3617 4276 1.680860 CGTCCTGGTTTATTGGTCCCC 60.681 57.143 0.00 0.00 0.00 4.81
3618 4277 1.639108 GTCCTGGTTTATTGGTCCCCT 59.361 52.381 0.00 0.00 0.00 4.79
3619 4278 2.042569 GTCCTGGTTTATTGGTCCCCTT 59.957 50.000 0.00 0.00 0.00 3.95
3620 4279 2.310647 TCCTGGTTTATTGGTCCCCTTC 59.689 50.000 0.00 0.00 0.00 3.46
3621 4280 2.365582 CTGGTTTATTGGTCCCCTTCG 58.634 52.381 0.00 0.00 0.00 3.79
3622 4281 1.706305 TGGTTTATTGGTCCCCTTCGT 59.294 47.619 0.00 0.00 0.00 3.85
3623 4282 2.911636 TGGTTTATTGGTCCCCTTCGTA 59.088 45.455 0.00 0.00 0.00 3.43
3624 4283 3.524380 TGGTTTATTGGTCCCCTTCGTAT 59.476 43.478 0.00 0.00 0.00 3.06
3625 4284 4.018233 TGGTTTATTGGTCCCCTTCGTATT 60.018 41.667 0.00 0.00 0.00 1.89
3626 4285 4.951715 GGTTTATTGGTCCCCTTCGTATTT 59.048 41.667 0.00 0.00 0.00 1.40
3627 4286 5.419788 GGTTTATTGGTCCCCTTCGTATTTT 59.580 40.000 0.00 0.00 0.00 1.82
3628 4287 6.071221 GGTTTATTGGTCCCCTTCGTATTTTT 60.071 38.462 0.00 0.00 0.00 1.94
3655 4314 7.587037 TCAAATTTTGACCTCAGATTTCACT 57.413 32.000 7.74 0.00 34.08 3.41
3656 4315 8.690203 TCAAATTTTGACCTCAGATTTCACTA 57.310 30.769 7.74 0.00 34.08 2.74
3657 4316 9.130661 TCAAATTTTGACCTCAGATTTCACTAA 57.869 29.630 7.74 0.00 34.08 2.24
3658 4317 9.185192 CAAATTTTGACCTCAGATTTCACTAAC 57.815 33.333 2.88 0.00 0.00 2.34
3659 4318 8.463930 AATTTTGACCTCAGATTTCACTAACA 57.536 30.769 0.00 0.00 0.00 2.41
3660 4319 7.873719 TTTTGACCTCAGATTTCACTAACAA 57.126 32.000 0.00 0.00 0.00 2.83
3661 4320 7.873719 TTTGACCTCAGATTTCACTAACAAA 57.126 32.000 0.00 0.00 0.00 2.83
3662 4321 7.873719 TTGACCTCAGATTTCACTAACAAAA 57.126 32.000 0.00 0.00 0.00 2.44
3663 4322 8.463930 TTGACCTCAGATTTCACTAACAAAAT 57.536 30.769 0.00 0.00 0.00 1.82
3664 4323 9.567776 TTGACCTCAGATTTCACTAACAAAATA 57.432 29.630 0.00 0.00 0.00 1.40
3665 4324 9.567776 TGACCTCAGATTTCACTAACAAAATAA 57.432 29.630 0.00 0.00 0.00 1.40
3776 4435 1.540267 TGGCACAAAATACGAAGGGG 58.460 50.000 0.00 0.00 31.92 4.79
3777 4436 1.074084 TGGCACAAAATACGAAGGGGA 59.926 47.619 0.00 0.00 31.92 4.81
3778 4437 1.471287 GGCACAAAATACGAAGGGGAC 59.529 52.381 0.00 0.00 0.00 4.46
3793 4452 1.746470 GGGACCAATAAACCAGGACG 58.254 55.000 0.00 0.00 0.00 4.79
3794 4453 1.680860 GGGACCAATAAACCAGGACGG 60.681 57.143 0.00 0.00 42.50 4.79
3795 4454 1.279846 GGACCAATAAACCAGGACGGA 59.720 52.381 0.00 0.00 38.63 4.69
3796 4455 2.629051 GACCAATAAACCAGGACGGAG 58.371 52.381 0.00 0.00 38.63 4.63
3797 4456 1.280998 ACCAATAAACCAGGACGGAGG 59.719 52.381 0.00 0.00 38.63 4.30
3798 4457 1.280998 CCAATAAACCAGGACGGAGGT 59.719 52.381 0.00 0.00 40.61 3.85
3799 4458 2.502538 CCAATAAACCAGGACGGAGGTA 59.497 50.000 0.00 0.00 37.07 3.08
3800 4459 3.431766 CCAATAAACCAGGACGGAGGTAG 60.432 52.174 0.00 0.00 37.07 3.18
3801 4460 2.610438 TAAACCAGGACGGAGGTAGT 57.390 50.000 0.00 0.00 37.07 2.73
3802 4461 2.610438 AAACCAGGACGGAGGTAGTA 57.390 50.000 0.00 0.00 37.07 1.82
3803 4462 1.844687 AACCAGGACGGAGGTAGTAC 58.155 55.000 0.00 0.00 37.07 2.73
3804 4463 0.998145 ACCAGGACGGAGGTAGTACT 59.002 55.000 0.00 0.00 36.07 2.73
3805 4464 2.200081 ACCAGGACGGAGGTAGTACTA 58.800 52.381 0.00 0.00 36.07 1.82
3825 4484 5.292765 ACTAGTCAACTGAGACAACACATG 58.707 41.667 0.00 0.00 40.98 3.21
3923 4582 6.096846 ACTTAATTGAACACTTCCAGCTGTTT 59.903 34.615 13.81 0.00 30.59 2.83
3986 4647 7.607615 TCCCAGTTTATTGTAGTATACTCCC 57.392 40.000 9.12 2.06 43.54 4.30
3987 4648 7.367828 TCCCAGTTTATTGTAGTATACTCCCT 58.632 38.462 9.12 0.00 43.54 4.20
3988 4649 7.508296 TCCCAGTTTATTGTAGTATACTCCCTC 59.492 40.741 9.12 0.00 43.54 4.30
3989 4650 7.256225 CCCAGTTTATTGTAGTATACTCCCTCC 60.256 44.444 9.12 0.00 43.54 4.30
3990 4651 7.368833 CAGTTTATTGTAGTATACTCCCTCCG 58.631 42.308 9.12 0.00 43.54 4.63
3991 4652 7.014038 CAGTTTATTGTAGTATACTCCCTCCGT 59.986 40.741 9.12 0.00 43.54 4.69
3992 4653 7.562821 AGTTTATTGTAGTATACTCCCTCCGTT 59.437 37.037 9.12 0.00 43.54 4.44
3993 4654 7.516198 TTATTGTAGTATACTCCCTCCGTTC 57.484 40.000 9.12 0.00 43.54 3.95
3994 4655 3.825328 TGTAGTATACTCCCTCCGTTCC 58.175 50.000 9.12 0.00 43.54 3.62
3995 4656 2.378378 AGTATACTCCCTCCGTTCCC 57.622 55.000 0.00 0.00 0.00 3.97
3996 4657 1.572415 AGTATACTCCCTCCGTTCCCA 59.428 52.381 0.00 0.00 0.00 4.37
3997 4658 2.023695 AGTATACTCCCTCCGTTCCCAA 60.024 50.000 0.00 0.00 0.00 4.12
3998 4659 1.961133 ATACTCCCTCCGTTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
3999 4660 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
4000 4661 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4001 4662 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
4002 4663 3.660959 ACTCCCTCCGTTCCCAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
4003 4664 4.042174 ACTCCCTCCGTTCCCAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
4004 4665 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
4005 4666 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
4006 4667 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
4007 4668 4.102681 CCCTCCGTTCCCAAATATAAGTCT 59.897 45.833 0.00 0.00 0.00 3.24
4008 4669 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
4009 4670 6.120220 CCTCCGTTCCCAAATATAAGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
4010 4671 6.602009 CCTCCGTTCCCAAATATAAGTCTTTT 59.398 38.462 0.00 0.00 0.00 2.27
4011 4672 7.122204 CCTCCGTTCCCAAATATAAGTCTTTTT 59.878 37.037 0.00 0.00 0.00 1.94
4012 4673 9.169592 CTCCGTTCCCAAATATAAGTCTTTTTA 57.830 33.333 0.00 0.00 0.00 1.52
4013 4674 9.169592 TCCGTTCCCAAATATAAGTCTTTTTAG 57.830 33.333 0.00 0.00 0.00 1.85
4014 4675 9.169592 CCGTTCCCAAATATAAGTCTTTTTAGA 57.830 33.333 0.00 0.00 0.00 2.10
4027 4688 8.753497 AAGTCTTTTTAGAGATTCCAACAAGT 57.247 30.769 0.00 0.00 0.00 3.16
4028 4689 8.159344 AGTCTTTTTAGAGATTCCAACAAGTG 57.841 34.615 0.00 0.00 0.00 3.16
4029 4690 7.993183 AGTCTTTTTAGAGATTCCAACAAGTGA 59.007 33.333 0.00 0.00 0.00 3.41
4030 4691 8.070769 GTCTTTTTAGAGATTCCAACAAGTGAC 58.929 37.037 0.00 0.00 0.00 3.67
4031 4692 7.993183 TCTTTTTAGAGATTCCAACAAGTGACT 59.007 33.333 0.00 0.00 0.00 3.41
4032 4693 9.273016 CTTTTTAGAGATTCCAACAAGTGACTA 57.727 33.333 0.00 0.00 0.00 2.59
4033 4694 8.603242 TTTTAGAGATTCCAACAAGTGACTAC 57.397 34.615 0.00 0.00 0.00 2.73
4034 4695 5.808366 AGAGATTCCAACAAGTGACTACA 57.192 39.130 0.00 0.00 0.00 2.74
4035 4696 6.365970 AGAGATTCCAACAAGTGACTACAT 57.634 37.500 0.00 0.00 0.00 2.29
4036 4697 7.482169 AGAGATTCCAACAAGTGACTACATA 57.518 36.000 0.00 0.00 0.00 2.29
4037 4698 8.083828 AGAGATTCCAACAAGTGACTACATAT 57.916 34.615 0.00 0.00 0.00 1.78
4038 4699 7.984050 AGAGATTCCAACAAGTGACTACATATG 59.016 37.037 0.00 0.00 0.00 1.78
4039 4700 7.851228 AGATTCCAACAAGTGACTACATATGA 58.149 34.615 10.38 0.00 0.00 2.15
4040 4701 8.321353 AGATTCCAACAAGTGACTACATATGAA 58.679 33.333 10.38 0.00 0.00 2.57
4041 4702 7.905604 TTCCAACAAGTGACTACATATGAAG 57.094 36.000 10.38 0.00 0.00 3.02
4042 4703 5.874810 TCCAACAAGTGACTACATATGAAGC 59.125 40.000 10.38 0.00 0.00 3.86
4043 4704 5.643348 CCAACAAGTGACTACATATGAAGCA 59.357 40.000 10.38 0.00 0.00 3.91
4044 4705 6.149308 CCAACAAGTGACTACATATGAAGCAA 59.851 38.462 10.38 0.00 0.00 3.91
4045 4706 7.308529 CCAACAAGTGACTACATATGAAGCAAA 60.309 37.037 10.38 0.00 0.00 3.68
4046 4707 7.744087 ACAAGTGACTACATATGAAGCAAAA 57.256 32.000 10.38 0.00 0.00 2.44
4047 4708 8.340618 ACAAGTGACTACATATGAAGCAAAAT 57.659 30.769 10.38 0.00 0.00 1.82
4048 4709 8.239314 ACAAGTGACTACATATGAAGCAAAATG 58.761 33.333 10.38 3.10 0.00 2.32
4049 4710 8.453320 CAAGTGACTACATATGAAGCAAAATGA 58.547 33.333 10.38 0.00 0.00 2.57
4050 4711 8.206325 AGTGACTACATATGAAGCAAAATGAG 57.794 34.615 10.38 0.00 0.00 2.90
4051 4712 7.826252 AGTGACTACATATGAAGCAAAATGAGT 59.174 33.333 10.38 0.00 0.00 3.41
4052 4713 7.907045 GTGACTACATATGAAGCAAAATGAGTG 59.093 37.037 10.38 0.00 0.00 3.51
4053 4714 7.823799 TGACTACATATGAAGCAAAATGAGTGA 59.176 33.333 10.38 0.00 0.00 3.41
4054 4715 8.565896 ACTACATATGAAGCAAAATGAGTGAA 57.434 30.769 10.38 0.00 0.00 3.18
4055 4716 9.182214 ACTACATATGAAGCAAAATGAGTGAAT 57.818 29.630 10.38 0.00 0.00 2.57
4056 4717 9.661187 CTACATATGAAGCAAAATGAGTGAATC 57.339 33.333 10.38 0.00 0.00 2.52
4057 4718 8.289939 ACATATGAAGCAAAATGAGTGAATCT 57.710 30.769 10.38 0.00 0.00 2.40
4058 4719 9.399797 ACATATGAAGCAAAATGAGTGAATCTA 57.600 29.630 10.38 0.00 0.00 1.98
4062 4723 9.624373 ATGAAGCAAAATGAGTGAATCTATACT 57.376 29.630 0.00 0.00 0.00 2.12
4063 4724 9.102757 TGAAGCAAAATGAGTGAATCTATACTC 57.897 33.333 0.00 0.00 42.77 2.59
4064 4725 9.323985 GAAGCAAAATGAGTGAATCTATACTCT 57.676 33.333 0.00 0.00 42.86 3.24
4099 4760 2.396590 ACATCCGTATGTTGTGGTCC 57.603 50.000 0.00 0.00 44.07 4.46
4100 4761 1.626321 ACATCCGTATGTTGTGGTCCA 59.374 47.619 0.00 0.00 44.07 4.02
4101 4762 2.238646 ACATCCGTATGTTGTGGTCCAT 59.761 45.455 0.00 0.00 44.07 3.41
4102 4763 3.278574 CATCCGTATGTTGTGGTCCATT 58.721 45.455 0.00 0.00 0.00 3.16
4103 4764 3.426787 TCCGTATGTTGTGGTCCATTT 57.573 42.857 0.00 0.00 0.00 2.32
4104 4765 3.078097 TCCGTATGTTGTGGTCCATTTG 58.922 45.455 0.00 0.00 0.00 2.32
4105 4766 3.078097 CCGTATGTTGTGGTCCATTTGA 58.922 45.455 0.00 0.00 0.00 2.69
4106 4767 3.504134 CCGTATGTTGTGGTCCATTTGAA 59.496 43.478 0.00 0.00 0.00 2.69
4107 4768 4.022762 CCGTATGTTGTGGTCCATTTGAAA 60.023 41.667 0.00 0.00 0.00 2.69
4108 4769 5.336372 CCGTATGTTGTGGTCCATTTGAAAT 60.336 40.000 0.00 0.00 0.00 2.17
4109 4770 5.572511 CGTATGTTGTGGTCCATTTGAAATG 59.427 40.000 10.84 10.84 0.00 2.32
4110 4771 5.549742 ATGTTGTGGTCCATTTGAAATGT 57.450 34.783 15.93 0.00 0.00 2.71
4111 4772 4.942852 TGTTGTGGTCCATTTGAAATGTC 58.057 39.130 15.93 8.91 0.00 3.06
4112 4773 4.648762 TGTTGTGGTCCATTTGAAATGTCT 59.351 37.500 15.93 0.00 0.00 3.41
4113 4774 5.830457 TGTTGTGGTCCATTTGAAATGTCTA 59.170 36.000 15.93 5.05 0.00 2.59
4114 4775 6.322456 TGTTGTGGTCCATTTGAAATGTCTAA 59.678 34.615 15.93 1.45 0.00 2.10
4115 4776 6.968263 TGTGGTCCATTTGAAATGTCTAAA 57.032 33.333 15.93 0.91 0.00 1.85
4116 4777 7.353414 TGTGGTCCATTTGAAATGTCTAAAA 57.647 32.000 15.93 0.00 0.00 1.52
4117 4778 7.786030 TGTGGTCCATTTGAAATGTCTAAAAA 58.214 30.769 15.93 0.00 0.00 1.94
4118 4779 7.925483 TGTGGTCCATTTGAAATGTCTAAAAAG 59.075 33.333 15.93 0.00 0.00 2.27
4119 4780 8.141268 GTGGTCCATTTGAAATGTCTAAAAAGA 58.859 33.333 15.93 1.84 0.00 2.52
4120 4781 8.141268 TGGTCCATTTGAAATGTCTAAAAAGAC 58.859 33.333 15.93 12.32 39.15 3.01
4121 4782 8.360390 GGTCCATTTGAAATGTCTAAAAAGACT 58.640 33.333 15.93 0.00 39.41 3.24
4122 4783 9.750125 GTCCATTTGAAATGTCTAAAAAGACTT 57.250 29.630 15.93 0.00 39.41 3.01
4139 4800 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
4140 4801 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
4141 4802 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
4142 4803 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
4143 4804 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
4216 4877 4.212214 GGATATCAATCTTCAACAGCGGAC 59.788 45.833 4.83 0.00 32.29 4.79
4253 4914 7.770897 GGGATGACTATAGTTCTTTGACATGTT 59.229 37.037 6.88 0.00 0.00 2.71
4297 7703 2.457366 ACTCTTGGTCTGTTTAGGCG 57.543 50.000 0.00 0.00 0.00 5.52
4344 7752 1.066605 GCATGGCTGTCCTTTGCATAG 59.933 52.381 0.00 0.00 39.99 2.23
4358 7766 8.783093 GTCCTTTGCATAGCATGTTGTATAATA 58.217 33.333 0.00 0.00 38.76 0.98
4600 8013 2.846206 TGGATACAGGACCAGCAAAGAT 59.154 45.455 0.00 0.00 46.17 2.40
4642 8055 1.453155 AAGCGGTCAATAGTTGGCTG 58.547 50.000 0.00 0.00 44.38 4.85
4725 8145 3.200605 TGCTGAAGGGCTCATGAAAGATA 59.799 43.478 0.00 0.00 32.14 1.98
4882 8305 7.762615 CCAACCTTTAGTGACATATTAGTTCGA 59.237 37.037 0.00 0.00 0.00 3.71
4925 8348 7.927048 TGAGAATCACAAGATTAGCATTGATG 58.073 34.615 0.00 0.00 42.56 3.07
4931 8354 8.070034 TCACAAGATTAGCATTGATGGAAAAT 57.930 30.769 0.00 0.00 0.00 1.82
5060 8483 9.924650 AGTTTATTACTACAGGAGTACAAGTTG 57.075 33.333 0.00 0.00 40.50 3.16
5061 8484 9.918630 GTTTATTACTACAGGAGTACAAGTTGA 57.081 33.333 10.54 0.00 40.50 3.18
5065 8488 5.298347 ACTACAGGAGTACAAGTTGAAAGC 58.702 41.667 10.54 0.00 36.27 3.51
5066 8489 4.423625 ACAGGAGTACAAGTTGAAAGCT 57.576 40.909 10.54 1.64 0.00 3.74
5067 8490 5.546621 ACAGGAGTACAAGTTGAAAGCTA 57.453 39.130 10.54 0.00 0.00 3.32
5068 8491 6.115448 ACAGGAGTACAAGTTGAAAGCTAT 57.885 37.500 10.54 0.00 0.00 2.97
5069 8492 5.934625 ACAGGAGTACAAGTTGAAAGCTATG 59.065 40.000 10.54 2.89 0.00 2.23
5070 8493 6.166279 CAGGAGTACAAGTTGAAAGCTATGA 58.834 40.000 10.54 0.00 0.00 2.15
5071 8494 6.650807 CAGGAGTACAAGTTGAAAGCTATGAA 59.349 38.462 10.54 0.00 0.00 2.57
5072 8495 6.651225 AGGAGTACAAGTTGAAAGCTATGAAC 59.349 38.462 10.54 0.00 0.00 3.18
5073 8496 6.651225 GGAGTACAAGTTGAAAGCTATGAACT 59.349 38.462 10.54 0.00 0.00 3.01
5074 8497 7.817962 GGAGTACAAGTTGAAAGCTATGAACTA 59.182 37.037 10.54 0.00 0.00 2.24
5075 8498 8.764524 AGTACAAGTTGAAAGCTATGAACTAG 57.235 34.615 10.54 0.00 0.00 2.57
5076 8499 8.585881 AGTACAAGTTGAAAGCTATGAACTAGA 58.414 33.333 10.54 0.00 0.00 2.43
5077 8500 7.897575 ACAAGTTGAAAGCTATGAACTAGAG 57.102 36.000 10.54 2.64 0.00 2.43
5078 8501 7.671302 ACAAGTTGAAAGCTATGAACTAGAGA 58.329 34.615 10.54 0.00 0.00 3.10
5079 8502 8.150945 ACAAGTTGAAAGCTATGAACTAGAGAA 58.849 33.333 10.54 0.00 0.00 2.87
5080 8503 8.993121 CAAGTTGAAAGCTATGAACTAGAGAAA 58.007 33.333 0.00 0.00 0.00 2.52
5081 8504 9.561069 AAGTTGAAAGCTATGAACTAGAGAAAA 57.439 29.630 0.00 0.00 0.00 2.29
5082 8505 9.561069 AGTTGAAAGCTATGAACTAGAGAAAAA 57.439 29.630 0.00 0.00 0.00 1.94
5085 8508 9.725019 TGAAAGCTATGAACTAGAGAAAAATGA 57.275 29.630 0.00 0.00 0.00 2.57
5087 8510 9.950496 AAAGCTATGAACTAGAGAAAAATGAGA 57.050 29.630 0.00 0.00 0.00 3.27
5089 8512 9.545105 AGCTATGAACTAGAGAAAAATGAGATG 57.455 33.333 0.00 0.00 0.00 2.90
5090 8513 9.539825 GCTATGAACTAGAGAAAAATGAGATGA 57.460 33.333 0.00 0.00 0.00 2.92
5094 8517 9.559732 TGAACTAGAGAAAAATGAGATGAAACA 57.440 29.630 0.00 0.00 0.00 2.83
5096 8519 9.784531 AACTAGAGAAAAATGAGATGAAACAGA 57.215 29.630 0.00 0.00 0.00 3.41
5097 8520 9.784531 ACTAGAGAAAAATGAGATGAAACAGAA 57.215 29.630 0.00 0.00 0.00 3.02
5168 8653 9.674824 CATGTTTTCTCTTTGGATATATGCTTC 57.325 33.333 5.77 0.00 0.00 3.86
5282 8767 5.859205 ATCTTCTTTGGTGCCCATAAATC 57.141 39.130 0.00 0.00 31.53 2.17
5309 8794 1.618837 AGTCAGAGGCTGCTCGTTTAA 59.381 47.619 0.00 0.00 0.00 1.52
5336 8821 1.490574 TTTTGGTTGTCAGTTGGGGG 58.509 50.000 0.00 0.00 0.00 5.40
5341 8826 2.325484 GGTTGTCAGTTGGGGGAAATT 58.675 47.619 0.00 0.00 0.00 1.82
5357 8842 6.154363 GGGGGAAATTCTGTTCACATATTTGA 59.846 38.462 0.00 0.00 32.15 2.69
5388 8873 2.025898 GAGTACTGCCAGACCTAGGAC 58.974 57.143 17.98 9.98 0.00 3.85
5402 8909 2.762887 CCTAGGACTGCTGATCTGAACA 59.237 50.000 1.05 0.00 0.00 3.18
5405 8912 5.069648 CCTAGGACTGCTGATCTGAACATAA 59.930 44.000 1.05 0.00 0.00 1.90
5532 9039 2.026822 TCCTGGGATCTTGAAACAGCTC 60.027 50.000 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.138596 AAAAAGTCAACCATGCGCAG 57.861 45.000 18.32 5.51 0.00 5.18
68 71 2.097299 GCACGTGCAACAAATCAACATG 60.097 45.455 34.52 0.00 41.59 3.21
69 72 2.126467 GCACGTGCAACAAATCAACAT 58.874 42.857 34.52 0.00 41.59 2.71
128 131 3.138205 ACACATTCGTCGCAACAAAAA 57.862 38.095 0.00 0.00 0.00 1.94
129 132 2.834574 ACACATTCGTCGCAACAAAA 57.165 40.000 0.00 0.00 0.00 2.44
130 133 4.475763 AATACACATTCGTCGCAACAAA 57.524 36.364 0.00 0.00 0.00 2.83
132 135 3.248841 ACAAATACACATTCGTCGCAACA 59.751 39.130 0.00 0.00 0.00 3.33
133 136 3.597825 CACAAATACACATTCGTCGCAAC 59.402 43.478 0.00 0.00 0.00 4.17
134 137 3.364465 CCACAAATACACATTCGTCGCAA 60.364 43.478 0.00 0.00 0.00 4.85
138 141 2.158841 ACGCCACAAATACACATTCGTC 59.841 45.455 0.00 0.00 0.00 4.20
140 143 2.504868 CACGCCACAAATACACATTCG 58.495 47.619 0.00 0.00 0.00 3.34
141 144 2.250188 GCACGCCACAAATACACATTC 58.750 47.619 0.00 0.00 0.00 2.67
163 166 4.400529 ACCACACAAAACCAAAATCCTC 57.599 40.909 0.00 0.00 0.00 3.71
177 181 4.277174 GGTGACATTTGAACATACCACACA 59.723 41.667 0.00 0.00 0.00 3.72
178 182 4.612712 CGGTGACATTTGAACATACCACAC 60.613 45.833 0.00 0.00 0.00 3.82
184 188 3.704800 TCCCGGTGACATTTGAACATA 57.295 42.857 0.00 0.00 0.00 2.29
195 199 0.243636 CTGCCAAAAATCCCGGTGAC 59.756 55.000 0.00 0.00 0.00 3.67
197 201 1.591183 CCTGCCAAAAATCCCGGTG 59.409 57.895 0.00 0.00 0.00 4.94
198 202 1.609210 CCCTGCCAAAAATCCCGGT 60.609 57.895 0.00 0.00 0.00 5.28
200 204 0.897863 TGACCCTGCCAAAAATCCCG 60.898 55.000 0.00 0.00 0.00 5.14
201 205 1.207811 CATGACCCTGCCAAAAATCCC 59.792 52.381 0.00 0.00 0.00 3.85
202 206 2.167075 CTCATGACCCTGCCAAAAATCC 59.833 50.000 0.00 0.00 0.00 3.01
222 228 6.127758 TGCGGTATTGTTGCAATATTTTCTCT 60.128 34.615 0.59 0.00 35.33 3.10
231 237 4.916983 ATGTATGCGGTATTGTTGCAAT 57.083 36.364 0.59 0.00 42.65 3.56
236 242 9.297586 CTATCGTTATATGTATGCGGTATTGTT 57.702 33.333 0.00 0.00 0.00 2.83
242 248 4.348656 CGCTATCGTTATATGTATGCGGT 58.651 43.478 0.00 0.00 37.68 5.68
262 268 2.833533 TTGCACCTGTCAGCAACGC 61.834 57.895 0.00 0.00 44.98 4.84
304 316 3.181445 ACAACTCCACATGCCAACTCTTA 60.181 43.478 0.00 0.00 0.00 2.10
315 327 3.169099 ACAGCTCTAGACAACTCCACAT 58.831 45.455 0.00 0.00 0.00 3.21
333 345 9.692749 TTCAAGTAACTACAATCAACTCTACAG 57.307 33.333 0.00 0.00 0.00 2.74
372 384 6.252015 CGTGCAAGTCCTGAAATTCATAAATG 59.748 38.462 0.00 0.00 0.00 2.32
375 387 5.000591 TCGTGCAAGTCCTGAAATTCATAA 58.999 37.500 0.00 0.00 0.00 1.90
398 410 4.212636 GCTTCAAGCAATTGCATTCAACTT 59.787 37.500 30.89 12.65 45.16 2.66
405 417 4.994907 TGATAGCTTCAAGCAATTGCAT 57.005 36.364 30.89 18.15 45.56 3.96
432 444 7.119116 GTGGTTGTTGTGAATACACTCATATCA 59.881 37.037 0.00 0.00 46.07 2.15
433 445 7.119116 TGTGGTTGTTGTGAATACACTCATATC 59.881 37.037 0.00 0.00 46.07 1.63
437 449 4.518249 TGTGGTTGTTGTGAATACACTCA 58.482 39.130 0.00 0.00 46.07 3.41
459 471 4.026052 CAAGGATGGAGCCCACTTAAATT 58.974 43.478 0.00 0.00 35.80 1.82
460 472 3.635591 CAAGGATGGAGCCCACTTAAAT 58.364 45.455 0.00 0.00 35.80 1.40
476 488 4.724399 TGGAGTTACTTTTCATGCAAGGA 58.276 39.130 0.00 0.00 0.00 3.36
484 496 9.747898 ATATGTTGGTATTGGAGTTACTTTTCA 57.252 29.630 0.00 0.00 0.00 2.69
494 506 6.460123 GGTTGCAAGATATGTTGGTATTGGAG 60.460 42.308 13.92 0.00 0.00 3.86
500 512 7.116075 ACTAATGGTTGCAAGATATGTTGGTA 58.884 34.615 13.92 0.00 0.00 3.25
516 528 3.369157 GGCCTACTCGACAACTAATGGTT 60.369 47.826 0.00 0.00 38.93 3.67
517 529 2.167900 GGCCTACTCGACAACTAATGGT 59.832 50.000 0.00 0.00 0.00 3.55
518 530 2.798499 CGGCCTACTCGACAACTAATGG 60.798 54.545 0.00 0.00 0.00 3.16
521 585 1.825090 TCGGCCTACTCGACAACTAA 58.175 50.000 0.00 0.00 0.00 2.24
544 608 4.558538 ATCCACAATATTTCTTGAGCGC 57.441 40.909 0.00 0.00 0.00 5.92
576 642 7.454260 ACTTGCTTAGAAAAGGGTCATTTAG 57.546 36.000 1.31 0.00 32.98 1.85
597 663 2.576615 GAGAGGTTGGTGAAGCAACTT 58.423 47.619 20.96 15.66 31.56 2.66
609 676 6.007703 TGGGTATAAGTTTTTGGAGAGGTTG 58.992 40.000 0.00 0.00 0.00 3.77
610 677 6.008331 GTGGGTATAAGTTTTTGGAGAGGTT 58.992 40.000 0.00 0.00 0.00 3.50
612 679 5.566469 TGTGGGTATAAGTTTTTGGAGAGG 58.434 41.667 0.00 0.00 0.00 3.69
637 704 8.397148 CAGTTTGACACAATTTTAAAAAGCCAT 58.603 29.630 4.44 0.00 0.00 4.40
652 719 2.495270 ACATGCCAAACAGTTTGACACA 59.505 40.909 25.08 19.21 43.26 3.72
662 729 7.495606 CACTATCTGTATTAGACATGCCAAACA 59.504 37.037 0.00 0.00 38.49 2.83
683 750 2.887783 AGAGATGCCGAATCGTCACTAT 59.112 45.455 0.82 0.00 40.54 2.12
684 751 2.298610 AGAGATGCCGAATCGTCACTA 58.701 47.619 0.82 0.00 40.54 2.74
692 760 1.133976 CCCCTCAAAGAGATGCCGAAT 60.134 52.381 0.00 0.00 0.00 3.34
700 768 2.637872 CACCACTTACCCCTCAAAGAGA 59.362 50.000 0.00 0.00 0.00 3.10
702 770 2.105821 CACACCACTTACCCCTCAAAGA 59.894 50.000 0.00 0.00 0.00 2.52
728 797 8.783903 TCCCTGAATAGCCCTTTTTAAGTATTA 58.216 33.333 0.00 0.00 0.00 0.98
729 798 7.648770 TCCCTGAATAGCCCTTTTTAAGTATT 58.351 34.615 0.00 0.00 0.00 1.89
731 800 6.645884 TCCCTGAATAGCCCTTTTTAAGTA 57.354 37.500 0.00 0.00 0.00 2.24
732 801 5.530176 TCCCTGAATAGCCCTTTTTAAGT 57.470 39.130 0.00 0.00 0.00 2.24
733 802 7.998964 TCTTATCCCTGAATAGCCCTTTTTAAG 59.001 37.037 0.00 0.00 0.00 1.85
773 904 0.984230 TCACATGTCTCAGGAACCCC 59.016 55.000 0.00 0.00 0.00 4.95
774 905 1.347707 TGTCACATGTCTCAGGAACCC 59.652 52.381 0.00 0.00 0.00 4.11
775 906 2.839486 TGTCACATGTCTCAGGAACC 57.161 50.000 0.00 0.00 0.00 3.62
776 907 4.614535 GCATTTGTCACATGTCTCAGGAAC 60.615 45.833 0.00 0.00 0.00 3.62
777 908 3.503363 GCATTTGTCACATGTCTCAGGAA 59.497 43.478 0.00 0.00 0.00 3.36
779 910 2.815503 TGCATTTGTCACATGTCTCAGG 59.184 45.455 0.00 0.00 0.00 3.86
780 911 3.251487 TGTGCATTTGTCACATGTCTCAG 59.749 43.478 0.00 0.00 39.29 3.35
799 939 5.220453 GGCCATCGAGCAAATTTATTTTGTG 60.220 40.000 0.00 0.00 45.41 3.33
883 1024 0.914644 TGAGATGAGAAAGGGGCAGG 59.085 55.000 0.00 0.00 0.00 4.85
965 1106 1.203758 GCGTAGGGTTTTGATTTGGGG 59.796 52.381 0.00 0.00 0.00 4.96
1224 1365 3.499202 AATCAGAACCATCTGGTGCAGTT 60.499 43.478 10.02 0.00 46.46 3.16
1284 1425 3.288290 CTATCGACGCTCCCCGCT 61.288 66.667 0.00 0.00 41.76 5.52
1287 1428 4.344474 CCGCTATCGACGCTCCCC 62.344 72.222 6.92 0.00 38.10 4.81
1506 1647 1.479323 CCTTCATCCCTTGCCACATTG 59.521 52.381 0.00 0.00 0.00 2.82
1509 1650 1.383799 CCCTTCATCCCTTGCCACA 59.616 57.895 0.00 0.00 0.00 4.17
1605 1746 1.296392 CCTCACATCCGGCTTGTCA 59.704 57.895 6.87 0.00 0.00 3.58
1631 1772 2.328099 CCACGGTCCTCTTGCTTGC 61.328 63.158 0.00 0.00 0.00 4.01
1675 1816 1.898574 CTTGCTTGTTCCACCGCCT 60.899 57.895 0.00 0.00 0.00 5.52
1676 1817 1.856265 CTCTTGCTTGTTCCACCGCC 61.856 60.000 0.00 0.00 0.00 6.13
1677 1818 1.576421 CTCTTGCTTGTTCCACCGC 59.424 57.895 0.00 0.00 0.00 5.68
1678 1819 0.250295 TCCTCTTGCTTGTTCCACCG 60.250 55.000 0.00 0.00 0.00 4.94
1679 1820 1.239347 GTCCTCTTGCTTGTTCCACC 58.761 55.000 0.00 0.00 0.00 4.61
1680 1821 1.239347 GGTCCTCTTGCTTGTTCCAC 58.761 55.000 0.00 0.00 0.00 4.02
1681 1822 0.250295 CGGTCCTCTTGCTTGTTCCA 60.250 55.000 0.00 0.00 0.00 3.53
1682 1823 0.250338 ACGGTCCTCTTGCTTGTTCC 60.250 55.000 0.00 0.00 0.00 3.62
1683 1824 0.868406 CACGGTCCTCTTGCTTGTTC 59.132 55.000 0.00 0.00 0.00 3.18
1684 1825 0.535102 CCACGGTCCTCTTGCTTGTT 60.535 55.000 0.00 0.00 0.00 2.83
1685 1826 1.071471 CCACGGTCCTCTTGCTTGT 59.929 57.895 0.00 0.00 0.00 3.16
1686 1827 1.071471 ACCACGGTCCTCTTGCTTG 59.929 57.895 0.00 0.00 0.00 4.01
1687 1828 1.071471 CACCACGGTCCTCTTGCTT 59.929 57.895 0.00 0.00 0.00 3.91
1688 1829 1.821061 CTCACCACGGTCCTCTTGCT 61.821 60.000 0.00 0.00 0.00 3.91
1689 1830 1.374758 CTCACCACGGTCCTCTTGC 60.375 63.158 0.00 0.00 0.00 4.01
1690 1831 0.244994 CTCTCACCACGGTCCTCTTG 59.755 60.000 0.00 0.00 0.00 3.02
1691 1832 0.900647 CCTCTCACCACGGTCCTCTT 60.901 60.000 0.00 0.00 0.00 2.85
1692 1833 1.304547 CCTCTCACCACGGTCCTCT 60.305 63.158 0.00 0.00 0.00 3.69
1693 1834 1.186267 AACCTCTCACCACGGTCCTC 61.186 60.000 0.00 0.00 0.00 3.71
1694 1835 0.763223 AAACCTCTCACCACGGTCCT 60.763 55.000 0.00 0.00 0.00 3.85
1695 1836 0.602905 CAAACCTCTCACCACGGTCC 60.603 60.000 0.00 0.00 0.00 4.46
1696 1837 0.391597 TCAAACCTCTCACCACGGTC 59.608 55.000 0.00 0.00 0.00 4.79
1697 1838 1.056660 ATCAAACCTCTCACCACGGT 58.943 50.000 0.00 0.00 0.00 4.83
1698 1839 3.262420 CTTATCAAACCTCTCACCACGG 58.738 50.000 0.00 0.00 0.00 4.94
1699 1840 2.673368 GCTTATCAAACCTCTCACCACG 59.327 50.000 0.00 0.00 0.00 4.94
1700 1841 3.010420 GGCTTATCAAACCTCTCACCAC 58.990 50.000 0.00 0.00 0.00 4.16
1701 1842 2.354704 CGGCTTATCAAACCTCTCACCA 60.355 50.000 0.00 0.00 0.00 4.17
1716 2130 2.499205 CGCCTCACATCCGGCTTA 59.501 61.111 0.00 0.00 44.11 3.09
1752 2166 2.168496 CCTCTAAACCTCTCACCACGA 58.832 52.381 0.00 0.00 0.00 4.35
1822 2477 2.124570 CCATGTCTTCCTGCCCCG 60.125 66.667 0.00 0.00 0.00 5.73
1911 2566 4.504916 CTCCCAGCCGTGAGAGCG 62.505 72.222 0.00 0.00 34.64 5.03
2040 2695 3.013921 CGCCTCAATAACTTTAAGCCCA 58.986 45.455 0.00 0.00 0.00 5.36
2307 2962 2.028567 AGCTTTGCTCACTACTCCACTC 60.029 50.000 0.00 0.00 30.62 3.51
2532 3187 1.608055 TGACCAAATGTGTGCAGGAG 58.392 50.000 0.00 0.00 0.00 3.69
2645 3300 8.473358 TGCAAGGAATGATTTCATATCTTGAT 57.527 30.769 24.42 1.04 42.45 2.57
2843 3498 4.114794 AGCATGCAACAGAAACAAAAGTC 58.885 39.130 21.98 0.00 0.00 3.01
2940 3595 3.069300 GCATAGAATCTGACTCAGCCTGA 59.931 47.826 0.62 0.00 0.00 3.86
3118 3773 9.826574 TCTAGCTACTGTGTTTTCTTCTAAAAA 57.173 29.630 0.00 0.00 0.00 1.94
3188 3843 0.104487 CCTGCACACAATTTGCCACA 59.896 50.000 0.00 0.00 39.39 4.17
3252 3907 7.707893 TGATATGATGGTGTCAATATATGCTCG 59.292 37.037 0.00 0.00 40.97 5.03
3324 3982 3.311871 CAGAATGATGGTCTTGCAGTAGC 59.688 47.826 0.00 0.00 39.69 3.58
3392 4051 5.545588 CAGAGAGATGTTTCAGACTTCCAA 58.454 41.667 0.00 0.00 33.96 3.53
3500 4159 4.744137 TGCAATTGGAATTTTCAACACTCG 59.256 37.500 7.72 0.00 0.00 4.18
3512 4171 7.422465 AGGTACATTACATTGCAATTGGAAT 57.578 32.000 18.40 18.40 36.49 3.01
3524 4183 5.372343 TGATGGCTCAAGGTACATTACAT 57.628 39.130 0.00 0.00 0.00 2.29
3593 4252 1.280998 ACCAATAAACCAGGACGGAGG 59.719 52.381 0.00 0.00 38.63 4.30
3594 4253 2.629051 GACCAATAAACCAGGACGGAG 58.371 52.381 0.00 0.00 38.63 4.63
3595 4254 1.279846 GGACCAATAAACCAGGACGGA 59.720 52.381 0.00 0.00 38.63 4.69
3596 4255 1.680860 GGGACCAATAAACCAGGACGG 60.681 57.143 0.00 0.00 42.50 4.79
3597 4256 1.746470 GGGACCAATAAACCAGGACG 58.254 55.000 0.00 0.00 0.00 4.79
3631 4290 7.587037 AGTGAAATCTGAGGTCAAAATTTGA 57.413 32.000 4.03 4.03 37.33 2.69
3632 4291 9.185192 GTTAGTGAAATCTGAGGTCAAAATTTG 57.815 33.333 0.00 0.00 0.00 2.32
3633 4292 8.912988 TGTTAGTGAAATCTGAGGTCAAAATTT 58.087 29.630 0.00 0.00 0.00 1.82
3634 4293 8.463930 TGTTAGTGAAATCTGAGGTCAAAATT 57.536 30.769 0.00 0.00 0.00 1.82
3635 4294 8.463930 TTGTTAGTGAAATCTGAGGTCAAAAT 57.536 30.769 0.00 0.00 0.00 1.82
3636 4295 7.873719 TTGTTAGTGAAATCTGAGGTCAAAA 57.126 32.000 0.00 0.00 0.00 2.44
3637 4296 7.873719 TTTGTTAGTGAAATCTGAGGTCAAA 57.126 32.000 0.00 0.00 0.00 2.69
3638 4297 7.873719 TTTTGTTAGTGAAATCTGAGGTCAA 57.126 32.000 0.00 0.00 0.00 3.18
3639 4298 9.567776 TTATTTTGTTAGTGAAATCTGAGGTCA 57.432 29.630 0.00 0.00 0.00 4.02
3744 4403 9.400638 CGTATTTTGTGCCAAATTTTTACTAGA 57.599 29.630 0.00 0.00 0.00 2.43
3745 4404 9.400638 TCGTATTTTGTGCCAAATTTTTACTAG 57.599 29.630 1.89 0.00 0.00 2.57
3746 4405 9.745880 TTCGTATTTTGTGCCAAATTTTTACTA 57.254 25.926 1.89 0.00 0.00 1.82
3747 4406 8.649973 TTCGTATTTTGTGCCAAATTTTTACT 57.350 26.923 1.89 0.00 0.00 2.24
3748 4407 8.007152 CCTTCGTATTTTGTGCCAAATTTTTAC 58.993 33.333 1.89 0.00 0.00 2.01
3749 4408 7.171678 CCCTTCGTATTTTGTGCCAAATTTTTA 59.828 33.333 1.89 0.00 0.00 1.52
3750 4409 6.017523 CCCTTCGTATTTTGTGCCAAATTTTT 60.018 34.615 1.89 0.00 0.00 1.94
3751 4410 5.468409 CCCTTCGTATTTTGTGCCAAATTTT 59.532 36.000 1.89 0.00 0.00 1.82
3752 4411 4.994217 CCCTTCGTATTTTGTGCCAAATTT 59.006 37.500 1.89 0.00 0.00 1.82
3753 4412 4.562552 CCCCTTCGTATTTTGTGCCAAATT 60.563 41.667 1.89 2.10 0.00 1.82
3754 4413 3.056179 CCCCTTCGTATTTTGTGCCAAAT 60.056 43.478 1.89 0.00 0.00 2.32
3755 4414 2.297597 CCCCTTCGTATTTTGTGCCAAA 59.702 45.455 0.00 0.00 0.00 3.28
3756 4415 1.889829 CCCCTTCGTATTTTGTGCCAA 59.110 47.619 0.00 0.00 0.00 4.52
3757 4416 1.074084 TCCCCTTCGTATTTTGTGCCA 59.926 47.619 0.00 0.00 0.00 4.92
3758 4417 1.471287 GTCCCCTTCGTATTTTGTGCC 59.529 52.381 0.00 0.00 0.00 5.01
3759 4418 1.471287 GGTCCCCTTCGTATTTTGTGC 59.529 52.381 0.00 0.00 0.00 4.57
3760 4419 2.785562 TGGTCCCCTTCGTATTTTGTG 58.214 47.619 0.00 0.00 0.00 3.33
3761 4420 3.512219 TTGGTCCCCTTCGTATTTTGT 57.488 42.857 0.00 0.00 0.00 2.83
3762 4421 6.327154 GTTTATTGGTCCCCTTCGTATTTTG 58.673 40.000 0.00 0.00 0.00 2.44
3763 4422 5.419788 GGTTTATTGGTCCCCTTCGTATTTT 59.580 40.000 0.00 0.00 0.00 1.82
3764 4423 4.951715 GGTTTATTGGTCCCCTTCGTATTT 59.048 41.667 0.00 0.00 0.00 1.40
3765 4424 4.018233 TGGTTTATTGGTCCCCTTCGTATT 60.018 41.667 0.00 0.00 0.00 1.89
3766 4425 3.524380 TGGTTTATTGGTCCCCTTCGTAT 59.476 43.478 0.00 0.00 0.00 3.06
3767 4426 2.911636 TGGTTTATTGGTCCCCTTCGTA 59.088 45.455 0.00 0.00 0.00 3.43
3768 4427 1.706305 TGGTTTATTGGTCCCCTTCGT 59.294 47.619 0.00 0.00 0.00 3.85
3769 4428 2.365582 CTGGTTTATTGGTCCCCTTCG 58.634 52.381 0.00 0.00 0.00 3.79
3770 4429 2.310647 TCCTGGTTTATTGGTCCCCTTC 59.689 50.000 0.00 0.00 0.00 3.46
3771 4430 2.042569 GTCCTGGTTTATTGGTCCCCTT 59.957 50.000 0.00 0.00 0.00 3.95
3772 4431 1.639108 GTCCTGGTTTATTGGTCCCCT 59.361 52.381 0.00 0.00 0.00 4.79
3773 4432 1.680860 CGTCCTGGTTTATTGGTCCCC 60.681 57.143 0.00 0.00 0.00 4.81
3774 4433 1.680860 CCGTCCTGGTTTATTGGTCCC 60.681 57.143 0.00 0.00 0.00 4.46
3775 4434 1.279846 TCCGTCCTGGTTTATTGGTCC 59.720 52.381 0.00 0.00 39.52 4.46
3776 4435 2.629051 CTCCGTCCTGGTTTATTGGTC 58.371 52.381 0.00 0.00 39.52 4.02
3777 4436 1.280998 CCTCCGTCCTGGTTTATTGGT 59.719 52.381 0.00 0.00 39.52 3.67
3778 4437 1.280998 ACCTCCGTCCTGGTTTATTGG 59.719 52.381 0.00 0.00 39.52 3.16
3779 4438 2.781681 ACCTCCGTCCTGGTTTATTG 57.218 50.000 0.00 0.00 39.52 1.90
3780 4439 3.447950 ACTACCTCCGTCCTGGTTTATT 58.552 45.455 0.00 0.00 39.52 1.40
3781 4440 3.111741 ACTACCTCCGTCCTGGTTTAT 57.888 47.619 0.00 0.00 39.52 1.40
3782 4441 2.610438 ACTACCTCCGTCCTGGTTTA 57.390 50.000 0.00 0.00 39.52 2.01
3783 4442 2.174360 GTACTACCTCCGTCCTGGTTT 58.826 52.381 0.00 0.00 39.52 3.27
3784 4443 1.357079 AGTACTACCTCCGTCCTGGTT 59.643 52.381 0.00 0.00 39.52 3.67
3785 4444 0.998145 AGTACTACCTCCGTCCTGGT 59.002 55.000 0.00 0.00 39.52 4.00
3786 4445 2.172293 ACTAGTACTACCTCCGTCCTGG 59.828 54.545 0.00 0.00 40.09 4.45
3787 4446 3.118482 TGACTAGTACTACCTCCGTCCTG 60.118 52.174 13.66 0.00 0.00 3.86
3788 4447 3.110705 TGACTAGTACTACCTCCGTCCT 58.889 50.000 13.66 0.00 0.00 3.85
3789 4448 3.550437 TGACTAGTACTACCTCCGTCC 57.450 52.381 13.66 1.59 0.00 4.79
3790 4449 4.332268 CAGTTGACTAGTACTACCTCCGTC 59.668 50.000 10.72 10.72 0.00 4.79
3791 4450 4.019860 TCAGTTGACTAGTACTACCTCCGT 60.020 45.833 0.00 0.00 0.00 4.69
3792 4451 4.511527 TCAGTTGACTAGTACTACCTCCG 58.488 47.826 0.00 0.00 0.00 4.63
3793 4452 5.585844 GTCTCAGTTGACTAGTACTACCTCC 59.414 48.000 0.00 0.00 34.39 4.30
3794 4453 6.171921 TGTCTCAGTTGACTAGTACTACCTC 58.828 44.000 0.00 0.00 37.79 3.85
3795 4454 6.124316 TGTCTCAGTTGACTAGTACTACCT 57.876 41.667 0.00 0.00 37.79 3.08
3796 4455 6.206243 TGTTGTCTCAGTTGACTAGTACTACC 59.794 42.308 0.00 0.00 37.79 3.18
3797 4456 7.076983 GTGTTGTCTCAGTTGACTAGTACTAC 58.923 42.308 0.00 0.00 37.79 2.73
3798 4457 6.769341 TGTGTTGTCTCAGTTGACTAGTACTA 59.231 38.462 1.89 1.89 37.79 1.82
3799 4458 5.593095 TGTGTTGTCTCAGTTGACTAGTACT 59.407 40.000 0.00 0.00 37.79 2.73
3800 4459 5.828747 TGTGTTGTCTCAGTTGACTAGTAC 58.171 41.667 0.00 0.00 37.79 2.73
3801 4460 6.040504 ACATGTGTTGTCTCAGTTGACTAGTA 59.959 38.462 0.00 0.00 37.79 1.82
3802 4461 5.163405 ACATGTGTTGTCTCAGTTGACTAGT 60.163 40.000 0.00 0.00 37.79 2.57
3803 4462 5.176406 CACATGTGTTGTCTCAGTTGACTAG 59.824 44.000 18.03 0.00 36.00 2.57
3804 4463 5.049828 CACATGTGTTGTCTCAGTTGACTA 58.950 41.667 18.03 0.00 36.00 2.59
3805 4464 3.873361 CACATGTGTTGTCTCAGTTGACT 59.127 43.478 18.03 0.00 36.00 3.41
3981 4642 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3982 4643 4.102681 ACTTATATTTGGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
3983 4644 4.042174 ACTTATATTTGGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
3984 4645 4.102681 AGACTTATATTTGGGAACGGAGGG 59.897 45.833 0.00 0.00 0.00 4.30
3985 4646 5.291905 AGACTTATATTTGGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
3986 4647 7.625828 AAAAGACTTATATTTGGGAACGGAG 57.374 36.000 0.00 0.00 0.00 4.63
3987 4648 9.169592 CTAAAAAGACTTATATTTGGGAACGGA 57.830 33.333 0.00 0.00 0.00 4.69
3988 4649 9.169592 TCTAAAAAGACTTATATTTGGGAACGG 57.830 33.333 0.00 0.00 0.00 4.44
4001 4662 9.847224 ACTTGTTGGAATCTCTAAAAAGACTTA 57.153 29.630 9.03 0.00 35.06 2.24
4002 4663 8.624776 CACTTGTTGGAATCTCTAAAAAGACTT 58.375 33.333 9.03 0.00 35.06 3.01
4003 4664 7.993183 TCACTTGTTGGAATCTCTAAAAAGACT 59.007 33.333 9.03 0.00 35.06 3.24
4004 4665 8.070769 GTCACTTGTTGGAATCTCTAAAAAGAC 58.929 37.037 9.03 0.00 35.06 3.01
4005 4666 7.993183 AGTCACTTGTTGGAATCTCTAAAAAGA 59.007 33.333 9.03 0.00 35.06 2.52
4006 4667 8.159344 AGTCACTTGTTGGAATCTCTAAAAAG 57.841 34.615 2.17 2.17 37.94 2.27
4007 4668 9.052759 GTAGTCACTTGTTGGAATCTCTAAAAA 57.947 33.333 0.00 0.00 0.00 1.94
4008 4669 8.208224 TGTAGTCACTTGTTGGAATCTCTAAAA 58.792 33.333 0.00 0.00 0.00 1.52
4009 4670 7.732025 TGTAGTCACTTGTTGGAATCTCTAAA 58.268 34.615 0.00 0.00 0.00 1.85
4010 4671 7.297936 TGTAGTCACTTGTTGGAATCTCTAA 57.702 36.000 0.00 0.00 0.00 2.10
4011 4672 6.911250 TGTAGTCACTTGTTGGAATCTCTA 57.089 37.500 0.00 0.00 0.00 2.43
4012 4673 5.808366 TGTAGTCACTTGTTGGAATCTCT 57.192 39.130 0.00 0.00 0.00 3.10
4013 4674 7.981789 TCATATGTAGTCACTTGTTGGAATCTC 59.018 37.037 1.90 0.00 0.00 2.75
4014 4675 7.851228 TCATATGTAGTCACTTGTTGGAATCT 58.149 34.615 1.90 0.00 0.00 2.40
4015 4676 8.492673 TTCATATGTAGTCACTTGTTGGAATC 57.507 34.615 1.90 0.00 0.00 2.52
4016 4677 7.066284 GCTTCATATGTAGTCACTTGTTGGAAT 59.934 37.037 10.61 0.00 0.00 3.01
4017 4678 6.371548 GCTTCATATGTAGTCACTTGTTGGAA 59.628 38.462 10.61 0.00 0.00 3.53
4018 4679 5.874810 GCTTCATATGTAGTCACTTGTTGGA 59.125 40.000 10.61 0.00 0.00 3.53
4019 4680 5.643348 TGCTTCATATGTAGTCACTTGTTGG 59.357 40.000 10.61 0.00 0.00 3.77
4020 4681 6.726258 TGCTTCATATGTAGTCACTTGTTG 57.274 37.500 10.61 0.00 0.00 3.33
4021 4682 7.744087 TTTGCTTCATATGTAGTCACTTGTT 57.256 32.000 10.61 0.00 0.00 2.83
4022 4683 7.744087 TTTTGCTTCATATGTAGTCACTTGT 57.256 32.000 10.61 0.00 0.00 3.16
4023 4684 8.453320 TCATTTTGCTTCATATGTAGTCACTTG 58.547 33.333 10.61 4.90 0.00 3.16
4024 4685 8.565896 TCATTTTGCTTCATATGTAGTCACTT 57.434 30.769 10.61 0.00 0.00 3.16
4025 4686 7.826252 ACTCATTTTGCTTCATATGTAGTCACT 59.174 33.333 10.61 0.00 0.00 3.41
4026 4687 7.907045 CACTCATTTTGCTTCATATGTAGTCAC 59.093 37.037 10.61 0.00 0.00 3.67
4027 4688 7.823799 TCACTCATTTTGCTTCATATGTAGTCA 59.176 33.333 10.61 6.75 0.00 3.41
4028 4689 8.201554 TCACTCATTTTGCTTCATATGTAGTC 57.798 34.615 10.61 4.54 0.00 2.59
4029 4690 8.565896 TTCACTCATTTTGCTTCATATGTAGT 57.434 30.769 10.61 0.00 0.00 2.73
4030 4691 9.661187 GATTCACTCATTTTGCTTCATATGTAG 57.339 33.333 5.04 5.04 0.00 2.74
4031 4692 9.399797 AGATTCACTCATTTTGCTTCATATGTA 57.600 29.630 1.90 0.00 0.00 2.29
4032 4693 8.289939 AGATTCACTCATTTTGCTTCATATGT 57.710 30.769 1.90 0.00 0.00 2.29
4036 4697 9.624373 AGTATAGATTCACTCATTTTGCTTCAT 57.376 29.630 0.00 0.00 0.00 2.57
4037 4698 9.102757 GAGTATAGATTCACTCATTTTGCTTCA 57.897 33.333 0.00 0.00 40.74 3.02
4038 4699 9.323985 AGAGTATAGATTCACTCATTTTGCTTC 57.676 33.333 4.70 0.00 42.99 3.86
4078 4739 3.452990 TGGACCACAACATACGGATGTAT 59.547 43.478 15.10 2.23 45.93 2.29
4079 4740 2.832733 TGGACCACAACATACGGATGTA 59.167 45.455 15.10 0.00 45.93 2.29
4081 4742 2.394930 TGGACCACAACATACGGATG 57.605 50.000 5.94 5.94 39.16 3.51
4082 4743 3.644966 AATGGACCACAACATACGGAT 57.355 42.857 0.00 0.00 0.00 4.18
4083 4744 3.078097 CAAATGGACCACAACATACGGA 58.922 45.455 0.00 0.00 0.00 4.69
4084 4745 3.078097 TCAAATGGACCACAACATACGG 58.922 45.455 0.00 0.00 0.00 4.02
4085 4746 4.757799 TTCAAATGGACCACAACATACG 57.242 40.909 0.00 0.00 0.00 3.06
4086 4747 6.454795 ACATTTCAAATGGACCACAACATAC 58.545 36.000 14.70 0.00 0.00 2.39
4087 4748 6.493115 AGACATTTCAAATGGACCACAACATA 59.507 34.615 14.70 0.00 0.00 2.29
4088 4749 5.305128 AGACATTTCAAATGGACCACAACAT 59.695 36.000 14.70 0.00 0.00 2.71
4089 4750 4.648762 AGACATTTCAAATGGACCACAACA 59.351 37.500 14.70 0.00 0.00 3.33
4090 4751 5.200368 AGACATTTCAAATGGACCACAAC 57.800 39.130 14.70 0.00 0.00 3.32
4091 4752 6.968263 TTAGACATTTCAAATGGACCACAA 57.032 33.333 14.70 0.00 0.00 3.33
4092 4753 6.968263 TTTAGACATTTCAAATGGACCACA 57.032 33.333 14.70 0.00 0.00 4.17
4093 4754 8.141268 TCTTTTTAGACATTTCAAATGGACCAC 58.859 33.333 14.70 1.26 0.00 4.16
4094 4755 8.141268 GTCTTTTTAGACATTTCAAATGGACCA 58.859 33.333 14.70 0.00 38.59 4.02
4095 4756 8.360390 AGTCTTTTTAGACATTTCAAATGGACC 58.640 33.333 14.70 3.60 41.02 4.46
4096 4757 9.750125 AAGTCTTTTTAGACATTTCAAATGGAC 57.250 29.630 14.70 8.92 41.02 4.02
4113 4774 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
4114 4775 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
4115 4776 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
4116 4777 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
4117 4778 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
4118 4779 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
4119 4780 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
4120 4781 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
4121 4782 8.731591 AATACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
4122 4783 8.731591 AAATACTCCCTCCGTTCCTAAATATA 57.268 34.615 0.00 0.00 0.00 0.86
4123 4784 7.628501 AAATACTCCCTCCGTTCCTAAATAT 57.371 36.000 0.00 0.00 0.00 1.28
4124 4785 7.786464 ACTAAATACTCCCTCCGTTCCTAAATA 59.214 37.037 0.00 0.00 0.00 1.40
4125 4786 5.970501 AAATACTCCCTCCGTTCCTAAAT 57.029 39.130 0.00 0.00 0.00 1.40
4126 4787 5.960202 ACTAAATACTCCCTCCGTTCCTAAA 59.040 40.000 0.00 0.00 0.00 1.85
4127 4788 5.522641 ACTAAATACTCCCTCCGTTCCTAA 58.477 41.667 0.00 0.00 0.00 2.69
4128 4789 5.134725 ACTAAATACTCCCTCCGTTCCTA 57.865 43.478 0.00 0.00 0.00 2.94
4129 4790 3.991683 ACTAAATACTCCCTCCGTTCCT 58.008 45.455 0.00 0.00 0.00 3.36
4130 4791 5.859205 TTACTAAATACTCCCTCCGTTCC 57.141 43.478 0.00 0.00 0.00 3.62
4131 4792 6.871844 AGTTTACTAAATACTCCCTCCGTTC 58.128 40.000 0.00 0.00 0.00 3.95
4132 4793 6.864151 AGTTTACTAAATACTCCCTCCGTT 57.136 37.500 0.00 0.00 0.00 4.44
4133 4794 7.961326 TTAGTTTACTAAATACTCCCTCCGT 57.039 36.000 0.00 0.00 35.67 4.69
4134 4795 8.473219 AGTTTAGTTTACTAAATACTCCCTCCG 58.527 37.037 15.80 0.00 46.37 4.63
4135 4796 9.597170 CAGTTTAGTTTACTAAATACTCCCTCC 57.403 37.037 15.80 3.20 46.37 4.30
4138 4799 9.376075 GGTCAGTTTAGTTTACTAAATACTCCC 57.624 37.037 15.80 9.60 46.37 4.30
4139 4800 9.080915 CGGTCAGTTTAGTTTACTAAATACTCC 57.919 37.037 15.80 14.31 46.37 3.85
4140 4801 9.846248 TCGGTCAGTTTAGTTTACTAAATACTC 57.154 33.333 15.80 5.76 46.37 2.59
4141 4802 9.631452 GTCGGTCAGTTTAGTTTACTAAATACT 57.369 33.333 15.80 9.01 46.37 2.12
4142 4803 9.631452 AGTCGGTCAGTTTAGTTTACTAAATAC 57.369 33.333 15.80 13.78 46.37 1.89
4143 4804 9.630098 CAGTCGGTCAGTTTAGTTTACTAAATA 57.370 33.333 15.80 5.18 46.37 1.40
4329 7737 1.747355 ACATGCTATGCAAAGGACAGC 59.253 47.619 0.00 0.00 43.62 4.40
4358 7766 5.163374 GCTGGAAATGGAGGCTTAATTCAAT 60.163 40.000 0.00 0.00 0.00 2.57
4374 7782 4.015084 CTGAATGAACCTGAGCTGGAAAT 58.985 43.478 0.00 0.00 0.00 2.17
4471 7880 3.893813 AGGAGCTGAATTATCCCATTTGC 59.106 43.478 0.00 0.00 33.30 3.68
4600 8013 7.531857 TTTGGATATTTAGGTTTGCACTGAA 57.468 32.000 0.00 0.00 0.00 3.02
4725 8145 8.455903 TGAAGAAACTGAAGATGACTTTGAAT 57.544 30.769 0.00 0.00 36.39 2.57
4925 8348 5.793817 AGACTGGTTAATGCCAAATTTTCC 58.206 37.500 0.00 0.00 38.18 3.13
4931 8354 5.222048 ACCTAGAAGACTGGTTAATGCCAAA 60.222 40.000 0.00 0.00 38.18 3.28
5002 8425 6.923199 AATCCACAGTTCTTCCAAAATGAT 57.077 33.333 0.00 0.00 0.00 2.45
5004 8427 9.492973 AAATAAATCCACAGTTCTTCCAAAATG 57.507 29.630 0.00 0.00 0.00 2.32
5052 8475 8.803235 TCTCTAGTTCATAGCTTTCAACTTGTA 58.197 33.333 0.00 0.00 31.52 2.41
5053 8476 7.671302 TCTCTAGTTCATAGCTTTCAACTTGT 58.329 34.615 0.00 0.00 31.52 3.16
5054 8477 8.539770 TTCTCTAGTTCATAGCTTTCAACTTG 57.460 34.615 0.00 0.00 31.52 3.16
5055 8478 9.561069 TTTTCTCTAGTTCATAGCTTTCAACTT 57.439 29.630 0.00 0.00 31.52 2.66
5056 8479 9.561069 TTTTTCTCTAGTTCATAGCTTTCAACT 57.439 29.630 0.00 0.00 33.63 3.16
5059 8482 9.725019 TCATTTTTCTCTAGTTCATAGCTTTCA 57.275 29.630 0.00 0.00 0.00 2.69
5061 8484 9.950496 TCTCATTTTTCTCTAGTTCATAGCTTT 57.050 29.630 0.00 0.00 0.00 3.51
5063 8486 9.545105 CATCTCATTTTTCTCTAGTTCATAGCT 57.455 33.333 0.00 0.00 0.00 3.32
5064 8487 9.539825 TCATCTCATTTTTCTCTAGTTCATAGC 57.460 33.333 0.00 0.00 0.00 2.97
5068 8491 9.559732 TGTTTCATCTCATTTTTCTCTAGTTCA 57.440 29.630 0.00 0.00 0.00 3.18
5070 8493 9.784531 TCTGTTTCATCTCATTTTTCTCTAGTT 57.215 29.630 0.00 0.00 0.00 2.24
5071 8494 9.784531 TTCTGTTTCATCTCATTTTTCTCTAGT 57.215 29.630 0.00 0.00 0.00 2.57
5074 8497 9.075678 ACATTCTGTTTCATCTCATTTTTCTCT 57.924 29.630 0.00 0.00 0.00 3.10
5075 8498 9.688592 AACATTCTGTTTCATCTCATTTTTCTC 57.311 29.630 0.00 0.00 37.26 2.87
5076 8499 9.688592 GAACATTCTGTTTCATCTCATTTTTCT 57.311 29.630 0.00 0.00 41.28 2.52
5077 8500 9.467258 TGAACATTCTGTTTCATCTCATTTTTC 57.533 29.630 0.00 0.00 41.28 2.29
5078 8501 9.472361 CTGAACATTCTGTTTCATCTCATTTTT 57.528 29.630 0.00 0.00 41.28 1.94
5079 8502 7.597743 GCTGAACATTCTGTTTCATCTCATTTT 59.402 33.333 0.00 0.00 41.28 1.82
5080 8503 7.088905 GCTGAACATTCTGTTTCATCTCATTT 58.911 34.615 0.00 0.00 41.28 2.32
5081 8504 6.208007 TGCTGAACATTCTGTTTCATCTCATT 59.792 34.615 0.00 0.00 41.28 2.57
5082 8505 5.708697 TGCTGAACATTCTGTTTCATCTCAT 59.291 36.000 0.00 0.00 41.28 2.90
5083 8506 5.065235 TGCTGAACATTCTGTTTCATCTCA 58.935 37.500 0.00 0.00 41.28 3.27
5084 8507 5.410746 TCTGCTGAACATTCTGTTTCATCTC 59.589 40.000 0.00 0.00 41.28 2.75
5085 8508 5.311265 TCTGCTGAACATTCTGTTTCATCT 58.689 37.500 0.00 0.00 41.28 2.90
5086 8509 5.618056 TCTGCTGAACATTCTGTTTCATC 57.382 39.130 0.00 0.00 41.28 2.92
5100 8523 1.488705 ATCCCGGTGGTTCTGCTGAA 61.489 55.000 0.00 1.33 0.00 3.02
5101 8524 1.488705 AATCCCGGTGGTTCTGCTGA 61.489 55.000 0.00 0.00 0.00 4.26
5102 8525 1.002134 AATCCCGGTGGTTCTGCTG 60.002 57.895 0.00 0.00 0.00 4.41
5103 8526 1.299976 GAATCCCGGTGGTTCTGCT 59.700 57.895 0.00 0.00 0.00 4.24
5104 8527 1.002624 TGAATCCCGGTGGTTCTGC 60.003 57.895 14.54 0.00 0.00 4.26
5105 8528 0.324943 ACTGAATCCCGGTGGTTCTG 59.675 55.000 16.09 16.09 31.94 3.02
5106 8529 1.064825 AACTGAATCCCGGTGGTTCT 58.935 50.000 14.54 0.00 33.87 3.01
5107 8530 1.539827 CAAACTGAATCCCGGTGGTTC 59.460 52.381 0.00 4.78 33.87 3.62
5168 8653 2.148916 TAGACAGCAACAAGGACACG 57.851 50.000 0.00 0.00 0.00 4.49
5282 8767 1.761784 AGCAGCCTCTGACTAATCCAG 59.238 52.381 0.00 0.00 32.44 3.86
5309 8794 5.410067 CAACTGACAACCAAAAACATCTGT 58.590 37.500 0.00 0.00 0.00 3.41
5336 8821 9.552114 CAGACTCAAATATGTGAACAGAATTTC 57.448 33.333 0.00 0.00 0.00 2.17
5341 8826 4.937620 GGCAGACTCAAATATGTGAACAGA 59.062 41.667 0.00 0.00 0.00 3.41
5375 8860 0.972983 TCAGCAGTCCTAGGTCTGGC 60.973 60.000 29.61 22.72 33.17 4.85
5388 8873 4.439968 TGAGCTTATGTTCAGATCAGCAG 58.560 43.478 0.00 0.00 31.73 4.24
5419 8926 0.034670 CCCTGAGCCAGAAAGGAAGG 60.035 60.000 4.00 0.00 41.22 3.46
5532 9039 3.178267 GCACTGTCTCTGAATTCTCTCG 58.822 50.000 7.05 0.00 0.00 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.