Multiple sequence alignment - TraesCS3B01G310300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G310300 chr3B 100.000 3029 0 0 1 3029 499083876 499086904 0.000000e+00 5594.0
1 TraesCS3B01G310300 chr3B 93.370 543 31 4 2344 2884 499092782 499093321 0.000000e+00 798.0
2 TraesCS3B01G310300 chr3D 95.498 1577 45 10 784 2345 383531092 383532657 0.000000e+00 2495.0
3 TraesCS3B01G310300 chr3D 92.216 167 11 2 589 753 383530833 383530999 5.050000e-58 235.0
4 TraesCS3B01G310300 chr3A 94.733 1519 51 9 829 2345 506420945 506422436 0.000000e+00 2335.0
5 TraesCS3B01G310300 chr2B 90.157 701 51 10 2346 3029 30638364 30639063 0.000000e+00 896.0
6 TraesCS3B01G310300 chr2B 86.511 556 48 20 2344 2884 655784407 655784950 1.210000e-163 586.0
7 TraesCS3B01G310300 chr2B 85.300 483 46 18 2344 2811 16221625 16222097 2.730000e-130 475.0
8 TraesCS3B01G310300 chr2B 85.538 325 33 9 2356 2668 655765803 655766125 8.100000e-86 327.0
9 TraesCS3B01G310300 chr7D 88.244 689 58 17 2356 3029 11328337 11329017 0.000000e+00 802.0
10 TraesCS3B01G310300 chr7D 100.000 28 0 0 1699 1726 364361133 364361106 5.000000e-03 52.8
11 TraesCS3B01G310300 chr7A 88.262 673 67 9 2346 3013 86112781 86113446 0.000000e+00 795.0
12 TraesCS3B01G310300 chr7A 86.706 677 68 16 2357 3017 735831055 735831725 0.000000e+00 732.0
13 TraesCS3B01G310300 chr7A 87.751 547 53 12 2344 2884 86136541 86137079 7.130000e-176 627.0
14 TraesCS3B01G310300 chr7A 86.257 342 29 12 2346 2672 30538233 30537895 3.710000e-94 355.0
15 TraesCS3B01G310300 chr5B 87.032 694 65 19 2346 3023 507627763 507628447 0.000000e+00 760.0
16 TraesCS3B01G310300 chr5B 100.000 52 0 0 2027 2078 15024671 15024620 2.490000e-16 97.1
17 TraesCS3B01G310300 chr4B 86.773 688 70 15 2356 3028 658530577 658529896 0.000000e+00 747.0
18 TraesCS3B01G310300 chr6A 86.475 695 74 13 2346 3028 581721745 581721059 0.000000e+00 745.0
19 TraesCS3B01G310300 chr6A 97.727 44 1 0 759 802 617688313 617688356 3.240000e-10 76.8
20 TraesCS3B01G310300 chr5D 92.810 459 32 1 5 462 505927143 505926685 0.000000e+00 664.0
21 TraesCS3B01G310300 chr5D 92.593 54 4 0 462 515 505926655 505926602 9.000000e-11 78.7
22 TraesCS3B01G310300 chr2A 83.257 651 81 14 2399 3028 714003359 714004002 9.420000e-160 573.0
23 TraesCS3B01G310300 chr2A 83.333 246 28 8 2788 3023 762245941 762246183 6.580000e-52 215.0
24 TraesCS3B01G310300 chr4A 88.478 460 51 2 3 460 420553195 420552736 3.410000e-154 555.0
25 TraesCS3B01G310300 chr4A 97.619 42 0 1 759 800 732973510 732973550 1.510000e-08 71.3
26 TraesCS3B01G310300 chr1B 97.619 42 1 0 759 800 623397526 623397567 4.190000e-09 73.1
27 TraesCS3B01G310300 chrUn 97.561 41 1 0 759 799 239294899 239294859 1.510000e-08 71.3
28 TraesCS3B01G310300 chrUn 97.561 41 1 0 759 799 251102673 251102633 1.510000e-08 71.3
29 TraesCS3B01G310300 chrUn 97.561 41 1 0 759 799 263543426 263543466 1.510000e-08 71.3
30 TraesCS3B01G310300 chrUn 97.561 41 1 0 759 799 266571446 266571486 1.510000e-08 71.3
31 TraesCS3B01G310300 chr1A 97.561 41 1 0 759 799 3261628 3261588 1.510000e-08 71.3
32 TraesCS3B01G310300 chr1A 97.561 41 1 0 759 799 552145889 552145929 1.510000e-08 71.3
33 TraesCS3B01G310300 chr2D 100.000 28 0 0 1699 1726 63374494 63374521 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G310300 chr3B 499083876 499086904 3028 False 5594.00 5594 100.0000 1 3029 1 chr3B.!!$F1 3028
1 TraesCS3B01G310300 chr3B 499092782 499093321 539 False 798.00 798 93.3700 2344 2884 1 chr3B.!!$F2 540
2 TraesCS3B01G310300 chr3D 383530833 383532657 1824 False 1365.00 2495 93.8570 589 2345 2 chr3D.!!$F1 1756
3 TraesCS3B01G310300 chr3A 506420945 506422436 1491 False 2335.00 2335 94.7330 829 2345 1 chr3A.!!$F1 1516
4 TraesCS3B01G310300 chr2B 30638364 30639063 699 False 896.00 896 90.1570 2346 3029 1 chr2B.!!$F2 683
5 TraesCS3B01G310300 chr2B 655784407 655784950 543 False 586.00 586 86.5110 2344 2884 1 chr2B.!!$F4 540
6 TraesCS3B01G310300 chr7D 11328337 11329017 680 False 802.00 802 88.2440 2356 3029 1 chr7D.!!$F1 673
7 TraesCS3B01G310300 chr7A 86112781 86113446 665 False 795.00 795 88.2620 2346 3013 1 chr7A.!!$F1 667
8 TraesCS3B01G310300 chr7A 735831055 735831725 670 False 732.00 732 86.7060 2357 3017 1 chr7A.!!$F3 660
9 TraesCS3B01G310300 chr7A 86136541 86137079 538 False 627.00 627 87.7510 2344 2884 1 chr7A.!!$F2 540
10 TraesCS3B01G310300 chr5B 507627763 507628447 684 False 760.00 760 87.0320 2346 3023 1 chr5B.!!$F1 677
11 TraesCS3B01G310300 chr4B 658529896 658530577 681 True 747.00 747 86.7730 2356 3028 1 chr4B.!!$R1 672
12 TraesCS3B01G310300 chr6A 581721059 581721745 686 True 745.00 745 86.4750 2346 3028 1 chr6A.!!$R1 682
13 TraesCS3B01G310300 chr5D 505926602 505927143 541 True 371.35 664 92.7015 5 515 2 chr5D.!!$R1 510
14 TraesCS3B01G310300 chr2A 714003359 714004002 643 False 573.00 573 83.2570 2399 3028 1 chr2A.!!$F1 629

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
540 541 0.031585 GGCACCAAACGTTTCCCTTC 59.968 55.0 11.37 0.0 0.0 3.46 F
769 770 0.035915 TCCGTCCGCCATTTTGATGA 60.036 50.0 0.00 0.0 0.0 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1782 1916 1.227263 CATCCGCTTCCCGTACAGG 60.227 63.158 0.00 0.0 40.63 4.00 R
2287 2427 1.274167 CCGTTAACACAGGGTGAGCTA 59.726 52.381 6.39 0.0 36.96 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 1.946768 CTCTGGTTCCAGCAAAACGAA 59.053 47.619 13.44 0.00 34.33 3.85
34 35 1.686052 TCCAGCAAAACGAAAAGCCAT 59.314 42.857 0.00 0.00 0.00 4.40
41 42 4.024977 GCAAAACGAAAAGCCATTCACAAT 60.025 37.500 0.00 0.00 0.00 2.71
47 48 7.350110 ACGAAAAGCCATTCACAATATTTTG 57.650 32.000 0.00 0.00 38.86 2.44
76 77 0.461548 TTGCATCTCCTTCGATCGCT 59.538 50.000 11.09 0.00 0.00 4.93
79 80 0.319383 CATCTCCTTCGATCGCTGGG 60.319 60.000 20.53 16.56 0.00 4.45
114 115 2.260869 CCAGGCGTGTTGGTTCCAG 61.261 63.158 5.57 0.00 0.00 3.86
117 118 2.268076 GGCGTGTTGGTTCCAGCAT 61.268 57.895 11.19 0.00 30.52 3.79
118 119 1.210155 GCGTGTTGGTTCCAGCATC 59.790 57.895 11.19 4.02 30.52 3.91
119 120 1.237285 GCGTGTTGGTTCCAGCATCT 61.237 55.000 11.19 0.00 30.52 2.90
120 121 0.798776 CGTGTTGGTTCCAGCATCTC 59.201 55.000 11.19 0.00 30.52 2.75
121 122 1.168714 GTGTTGGTTCCAGCATCTCC 58.831 55.000 11.19 0.00 30.52 3.71
122 123 0.321564 TGTTGGTTCCAGCATCTCCG 60.322 55.000 4.34 0.00 0.00 4.63
123 124 0.036388 GTTGGTTCCAGCATCTCCGA 60.036 55.000 0.95 0.00 0.00 4.55
124 125 0.911769 TTGGTTCCAGCATCTCCGAT 59.088 50.000 0.00 0.00 0.00 4.18
125 126 0.178767 TGGTTCCAGCATCTCCGATG 59.821 55.000 0.00 0.00 0.00 3.84
126 127 0.465705 GGTTCCAGCATCTCCGATGA 59.534 55.000 7.96 0.00 0.00 2.92
127 128 1.071385 GGTTCCAGCATCTCCGATGAT 59.929 52.381 7.96 0.00 0.00 2.45
128 129 2.141517 GTTCCAGCATCTCCGATGATG 58.858 52.381 13.48 13.48 44.72 3.07
133 134 0.590195 GCATCTCCGATGATGGTTGC 59.410 55.000 15.71 3.51 42.82 4.17
134 135 1.957668 CATCTCCGATGATGGTTGCA 58.042 50.000 8.95 0.00 39.91 4.08
135 136 1.871676 CATCTCCGATGATGGTTGCAG 59.128 52.381 8.95 0.00 39.91 4.41
136 137 0.462581 TCTCCGATGATGGTTGCAGC 60.463 55.000 0.00 0.00 0.00 5.25
137 138 0.463295 CTCCGATGATGGTTGCAGCT 60.463 55.000 0.00 0.00 0.00 4.24
138 139 0.035152 TCCGATGATGGTTGCAGCTT 60.035 50.000 0.00 0.00 0.00 3.74
139 140 0.813184 CCGATGATGGTTGCAGCTTT 59.187 50.000 0.00 0.00 0.00 3.51
140 141 1.203052 CCGATGATGGTTGCAGCTTTT 59.797 47.619 0.00 0.00 0.00 2.27
141 142 2.256174 CGATGATGGTTGCAGCTTTTG 58.744 47.619 0.00 0.00 0.00 2.44
142 143 2.613691 GATGATGGTTGCAGCTTTTGG 58.386 47.619 0.00 0.00 0.00 3.28
143 144 0.033781 TGATGGTTGCAGCTTTTGGC 59.966 50.000 0.00 0.00 42.19 4.52
166 167 3.827784 CGTCGTAGCTGCGTGCAC 61.828 66.667 23.58 13.62 45.94 4.57
167 168 3.827784 GTCGTAGCTGCGTGCACG 61.828 66.667 34.01 34.01 45.94 5.34
182 183 4.344865 ACGGCCGGTTCCAGCAAT 62.345 61.111 31.76 0.00 0.00 3.56
183 184 3.508840 CGGCCGGTTCCAGCAATC 61.509 66.667 20.10 0.00 0.00 2.67
184 185 2.044946 GGCCGGTTCCAGCAATCT 60.045 61.111 1.90 0.00 0.00 2.40
185 186 2.115291 GGCCGGTTCCAGCAATCTC 61.115 63.158 1.90 0.00 0.00 2.75
186 187 2.115291 GCCGGTTCCAGCAATCTCC 61.115 63.158 1.90 0.00 0.00 3.71
187 188 1.299648 CCGGTTCCAGCAATCTCCA 59.700 57.895 0.00 0.00 0.00 3.86
188 189 0.322456 CCGGTTCCAGCAATCTCCAA 60.322 55.000 0.00 0.00 0.00 3.53
189 190 0.804989 CGGTTCCAGCAATCTCCAAC 59.195 55.000 0.00 0.00 0.00 3.77
190 191 1.881925 CGGTTCCAGCAATCTCCAACA 60.882 52.381 0.00 0.00 0.00 3.33
191 192 2.238521 GGTTCCAGCAATCTCCAACAA 58.761 47.619 0.00 0.00 0.00 2.83
192 193 2.029918 GGTTCCAGCAATCTCCAACAAC 60.030 50.000 0.00 0.00 0.00 3.32
193 194 1.909700 TCCAGCAATCTCCAACAACC 58.090 50.000 0.00 0.00 0.00 3.77
194 195 1.144708 TCCAGCAATCTCCAACAACCA 59.855 47.619 0.00 0.00 0.00 3.67
195 196 2.173519 CCAGCAATCTCCAACAACCAT 58.826 47.619 0.00 0.00 0.00 3.55
196 197 2.564062 CCAGCAATCTCCAACAACCATT 59.436 45.455 0.00 0.00 0.00 3.16
197 198 3.581755 CAGCAATCTCCAACAACCATTG 58.418 45.455 0.00 0.00 0.00 2.82
199 200 4.218200 CAGCAATCTCCAACAACCATTGTA 59.782 41.667 0.00 0.00 44.59 2.41
200 201 4.460382 AGCAATCTCCAACAACCATTGTAG 59.540 41.667 0.00 0.00 44.59 2.74
201 202 4.737054 CAATCTCCAACAACCATTGTAGC 58.263 43.478 0.00 0.00 44.59 3.58
202 203 3.788227 TCTCCAACAACCATTGTAGCT 57.212 42.857 0.00 0.00 44.59 3.32
203 204 4.098914 TCTCCAACAACCATTGTAGCTT 57.901 40.909 0.00 0.00 44.59 3.74
204 205 4.469657 TCTCCAACAACCATTGTAGCTTT 58.530 39.130 0.00 0.00 44.59 3.51
205 206 4.892934 TCTCCAACAACCATTGTAGCTTTT 59.107 37.500 0.00 0.00 44.59 2.27
206 207 5.362430 TCTCCAACAACCATTGTAGCTTTTT 59.638 36.000 0.00 0.00 44.59 1.94
227 228 5.422214 TTTCACTAGTTCCAGAATCTCCC 57.578 43.478 0.00 0.00 0.00 4.30
228 229 4.061131 TCACTAGTTCCAGAATCTCCCA 57.939 45.455 0.00 0.00 0.00 4.37
229 230 4.026744 TCACTAGTTCCAGAATCTCCCAG 58.973 47.826 0.00 0.00 0.00 4.45
230 231 4.026744 CACTAGTTCCAGAATCTCCCAGA 58.973 47.826 0.00 0.00 0.00 3.86
231 232 4.467795 CACTAGTTCCAGAATCTCCCAGAA 59.532 45.833 0.00 0.00 0.00 3.02
232 233 5.046304 CACTAGTTCCAGAATCTCCCAGAAA 60.046 44.000 0.00 0.00 0.00 2.52
233 234 4.293662 AGTTCCAGAATCTCCCAGAAAC 57.706 45.455 0.00 0.00 0.00 2.78
234 235 3.652869 AGTTCCAGAATCTCCCAGAAACA 59.347 43.478 0.00 0.00 0.00 2.83
235 236 3.988976 TCCAGAATCTCCCAGAAACAG 57.011 47.619 0.00 0.00 0.00 3.16
236 237 3.251484 TCCAGAATCTCCCAGAAACAGT 58.749 45.455 0.00 0.00 0.00 3.55
237 238 3.652869 TCCAGAATCTCCCAGAAACAGTT 59.347 43.478 0.00 0.00 0.00 3.16
238 239 3.755378 CCAGAATCTCCCAGAAACAGTTG 59.245 47.826 0.00 0.00 0.00 3.16
239 240 3.190118 CAGAATCTCCCAGAAACAGTTGC 59.810 47.826 0.00 0.00 0.00 4.17
240 241 2.957402 ATCTCCCAGAAACAGTTGCA 57.043 45.000 0.00 0.00 0.00 4.08
241 242 2.727123 TCTCCCAGAAACAGTTGCAA 57.273 45.000 0.00 0.00 0.00 4.08
242 243 2.297701 TCTCCCAGAAACAGTTGCAAC 58.702 47.619 22.17 22.17 0.00 4.17
243 244 2.092429 TCTCCCAGAAACAGTTGCAACT 60.092 45.455 26.36 26.36 40.60 3.16
244 245 2.689983 CTCCCAGAAACAGTTGCAACTT 59.310 45.455 29.23 15.72 37.08 2.66
245 246 2.687935 TCCCAGAAACAGTTGCAACTTC 59.312 45.455 29.23 22.96 37.08 3.01
246 247 2.223805 CCCAGAAACAGTTGCAACTTCC 60.224 50.000 29.23 17.09 37.08 3.46
247 248 2.541588 CCAGAAACAGTTGCAACTTCCG 60.542 50.000 29.23 20.02 37.08 4.30
248 249 1.676006 AGAAACAGTTGCAACTTCCGG 59.324 47.619 29.23 19.67 37.08 5.14
249 250 0.102300 AAACAGTTGCAACTTCCGGC 59.898 50.000 29.23 0.54 37.08 6.13
250 251 1.034838 AACAGTTGCAACTTCCGGCA 61.035 50.000 29.23 0.00 37.08 5.69
251 252 0.823356 ACAGTTGCAACTTCCGGCAT 60.823 50.000 29.23 3.42 40.17 4.40
252 253 0.109597 CAGTTGCAACTTCCGGCATC 60.110 55.000 29.23 0.00 40.17 3.91
253 254 1.154225 GTTGCAACTTCCGGCATCG 60.154 57.895 22.36 0.00 40.17 3.84
254 255 1.599518 TTGCAACTTCCGGCATCGT 60.600 52.632 0.00 0.00 40.17 3.73
255 256 1.573829 TTGCAACTTCCGGCATCGTC 61.574 55.000 0.00 0.00 40.17 4.20
256 257 3.081133 CAACTTCCGGCATCGTCG 58.919 61.111 0.00 0.00 33.95 5.12
257 258 1.736645 CAACTTCCGGCATCGTCGT 60.737 57.895 0.00 0.00 33.95 4.34
258 259 1.445582 AACTTCCGGCATCGTCGTC 60.446 57.895 0.00 0.00 33.95 4.20
259 260 2.949678 CTTCCGGCATCGTCGTCG 60.950 66.667 0.00 0.00 38.55 5.12
265 266 3.906649 GCATCGTCGTCGCAGCTG 61.907 66.667 10.11 10.11 36.96 4.24
266 267 3.906649 CATCGTCGTCGCAGCTGC 61.907 66.667 29.12 29.12 36.96 5.25
267 268 4.419939 ATCGTCGTCGCAGCTGCA 62.420 61.111 36.03 21.33 42.21 4.41
268 269 3.706563 ATCGTCGTCGCAGCTGCAT 62.707 57.895 36.03 18.58 42.21 3.96
269 270 4.200851 CGTCGTCGCAGCTGCATG 62.201 66.667 36.03 26.18 42.21 4.06
270 271 4.511443 GTCGTCGCAGCTGCATGC 62.511 66.667 36.03 23.39 42.21 4.06
272 273 4.516135 CGTCGCAGCTGCATGCAG 62.516 66.667 37.81 37.81 46.87 4.41
273 274 4.175489 GTCGCAGCTGCATGCAGG 62.175 66.667 40.59 28.79 46.87 4.85
283 284 4.738998 CATGCAGGGCCGGTTCCA 62.739 66.667 16.39 0.00 0.00 3.53
284 285 4.431131 ATGCAGGGCCGGTTCCAG 62.431 66.667 16.39 10.50 0.00 3.86
287 288 4.659172 CAGGGCCGGTTCCAGCAA 62.659 66.667 16.39 0.00 0.00 3.91
288 289 3.897122 AGGGCCGGTTCCAGCAAA 61.897 61.111 16.39 0.00 0.00 3.68
289 290 2.915137 GGGCCGGTTCCAGCAAAA 60.915 61.111 1.90 0.00 0.00 2.44
290 291 2.503382 GGGCCGGTTCCAGCAAAAA 61.503 57.895 1.90 0.00 0.00 1.94
307 308 2.693267 AAAATGGGGACGACTAGCTC 57.307 50.000 0.00 0.00 0.00 4.09
313 314 2.100603 GACGACTAGCTCGCGCTT 59.899 61.111 4.69 0.00 46.47 4.68
314 315 2.202492 ACGACTAGCTCGCGCTTG 60.202 61.111 4.69 6.20 46.47 4.01
315 316 2.100410 CGACTAGCTCGCGCTTGA 59.900 61.111 15.55 0.00 46.47 3.02
316 317 1.298713 CGACTAGCTCGCGCTTGAT 60.299 57.895 15.55 0.00 46.47 2.57
317 318 0.867753 CGACTAGCTCGCGCTTGATT 60.868 55.000 15.55 0.00 46.47 2.57
318 319 1.597199 CGACTAGCTCGCGCTTGATTA 60.597 52.381 15.55 0.00 46.47 1.75
319 320 2.047769 GACTAGCTCGCGCTTGATTAG 58.952 52.381 15.55 4.26 46.47 1.73
320 321 1.676529 ACTAGCTCGCGCTTGATTAGA 59.323 47.619 15.55 0.00 46.47 2.10
321 322 2.287308 ACTAGCTCGCGCTTGATTAGAG 60.287 50.000 15.55 3.61 46.47 2.43
322 323 0.741326 AGCTCGCGCTTGATTAGAGA 59.259 50.000 5.56 0.00 46.47 3.10
323 324 1.339610 AGCTCGCGCTTGATTAGAGAT 59.660 47.619 5.56 0.00 46.47 2.75
324 325 1.455030 GCTCGCGCTTGATTAGAGATG 59.545 52.381 5.56 0.00 0.00 2.90
325 326 2.736978 CTCGCGCTTGATTAGAGATGT 58.263 47.619 5.56 0.00 0.00 3.06
326 327 2.463876 TCGCGCTTGATTAGAGATGTG 58.536 47.619 5.56 0.00 0.00 3.21
327 328 1.524355 CGCGCTTGATTAGAGATGTGG 59.476 52.381 5.56 0.00 0.00 4.17
328 329 2.799562 CGCGCTTGATTAGAGATGTGGA 60.800 50.000 5.56 0.00 0.00 4.02
329 330 3.198068 GCGCTTGATTAGAGATGTGGAA 58.802 45.455 0.00 0.00 0.00 3.53
330 331 3.247173 GCGCTTGATTAGAGATGTGGAAG 59.753 47.826 0.00 0.00 0.00 3.46
331 332 4.437239 CGCTTGATTAGAGATGTGGAAGT 58.563 43.478 0.00 0.00 0.00 3.01
332 333 4.505922 CGCTTGATTAGAGATGTGGAAGTC 59.494 45.833 0.00 0.00 0.00 3.01
333 334 5.669477 GCTTGATTAGAGATGTGGAAGTCT 58.331 41.667 0.00 0.00 0.00 3.24
334 335 6.460261 CGCTTGATTAGAGATGTGGAAGTCTA 60.460 42.308 0.00 0.00 0.00 2.59
335 336 7.268586 GCTTGATTAGAGATGTGGAAGTCTAA 58.731 38.462 0.00 0.00 36.27 2.10
336 337 7.766278 GCTTGATTAGAGATGTGGAAGTCTAAA 59.234 37.037 0.00 0.00 35.64 1.85
337 338 9.092876 CTTGATTAGAGATGTGGAAGTCTAAAC 57.907 37.037 0.00 0.00 35.64 2.01
338 339 8.367660 TGATTAGAGATGTGGAAGTCTAAACT 57.632 34.615 0.00 0.00 35.64 2.66
339 340 9.475620 TGATTAGAGATGTGGAAGTCTAAACTA 57.524 33.333 0.00 0.00 35.64 2.24
343 344 8.367660 AGAGATGTGGAAGTCTAAACTAATCA 57.632 34.615 0.00 0.00 33.48 2.57
344 345 8.816894 AGAGATGTGGAAGTCTAAACTAATCAA 58.183 33.333 0.00 0.00 33.48 2.57
345 346 9.606631 GAGATGTGGAAGTCTAAACTAATCAAT 57.393 33.333 0.00 0.00 33.48 2.57
346 347 9.388506 AGATGTGGAAGTCTAAACTAATCAATG 57.611 33.333 0.00 0.00 33.48 2.82
347 348 7.921786 TGTGGAAGTCTAAACTAATCAATGG 57.078 36.000 0.00 0.00 33.48 3.16
348 349 6.374333 TGTGGAAGTCTAAACTAATCAATGGC 59.626 38.462 0.00 0.00 33.48 4.40
349 350 5.584649 TGGAAGTCTAAACTAATCAATGGCG 59.415 40.000 0.00 0.00 33.48 5.69
350 351 5.007724 GGAAGTCTAAACTAATCAATGGCGG 59.992 44.000 0.00 0.00 33.48 6.13
351 352 4.451900 AGTCTAAACTAATCAATGGCGGG 58.548 43.478 0.00 0.00 32.59 6.13
352 353 4.163458 AGTCTAAACTAATCAATGGCGGGA 59.837 41.667 0.00 0.00 32.59 5.14
353 354 4.511826 GTCTAAACTAATCAATGGCGGGAG 59.488 45.833 0.00 0.00 0.00 4.30
354 355 2.348411 AACTAATCAATGGCGGGAGG 57.652 50.000 0.00 0.00 0.00 4.30
355 356 0.474184 ACTAATCAATGGCGGGAGGG 59.526 55.000 0.00 0.00 0.00 4.30
356 357 0.250901 CTAATCAATGGCGGGAGGGG 60.251 60.000 0.00 0.00 0.00 4.79
357 358 0.696143 TAATCAATGGCGGGAGGGGA 60.696 55.000 0.00 0.00 0.00 4.81
358 359 1.363530 AATCAATGGCGGGAGGGGAT 61.364 55.000 0.00 0.00 0.00 3.85
359 360 2.072874 ATCAATGGCGGGAGGGGATG 62.073 60.000 0.00 0.00 0.00 3.51
360 361 3.501911 AATGGCGGGAGGGGATGG 61.502 66.667 0.00 0.00 0.00 3.51
366 367 4.201122 GGGAGGGGATGGCAGCAG 62.201 72.222 4.64 0.00 0.00 4.24
367 368 3.092511 GGAGGGGATGGCAGCAGA 61.093 66.667 4.64 0.00 0.00 4.26
368 369 2.509916 GAGGGGATGGCAGCAGAG 59.490 66.667 4.64 0.00 0.00 3.35
369 370 3.095163 AGGGGATGGCAGCAGAGG 61.095 66.667 4.64 0.00 0.00 3.69
370 371 3.415087 GGGGATGGCAGCAGAGGT 61.415 66.667 4.64 0.00 0.00 3.85
371 372 2.072487 GGGGATGGCAGCAGAGGTA 61.072 63.158 4.64 0.00 0.00 3.08
372 373 1.449353 GGGATGGCAGCAGAGGTAG 59.551 63.158 4.64 0.00 0.00 3.18
373 374 1.449353 GGATGGCAGCAGAGGTAGG 59.551 63.158 4.64 0.00 0.00 3.18
374 375 1.341156 GGATGGCAGCAGAGGTAGGT 61.341 60.000 4.64 0.00 0.00 3.08
375 376 0.179062 GATGGCAGCAGAGGTAGGTG 60.179 60.000 0.00 0.00 37.53 4.00
376 377 0.618680 ATGGCAGCAGAGGTAGGTGA 60.619 55.000 0.00 0.00 36.64 4.02
377 378 1.219393 GGCAGCAGAGGTAGGTGAC 59.781 63.158 0.00 0.00 36.64 3.67
378 379 1.153745 GCAGCAGAGGTAGGTGACG 60.154 63.158 0.00 0.00 36.64 4.35
379 380 1.595993 GCAGCAGAGGTAGGTGACGA 61.596 60.000 0.00 0.00 36.64 4.20
380 381 1.107114 CAGCAGAGGTAGGTGACGAT 58.893 55.000 0.00 0.00 36.64 3.73
381 382 1.107114 AGCAGAGGTAGGTGACGATG 58.893 55.000 0.00 0.00 0.00 3.84
382 383 0.103208 GCAGAGGTAGGTGACGATGG 59.897 60.000 0.00 0.00 0.00 3.51
383 384 0.747255 CAGAGGTAGGTGACGATGGG 59.253 60.000 0.00 0.00 0.00 4.00
384 385 0.397254 AGAGGTAGGTGACGATGGGG 60.397 60.000 0.00 0.00 0.00 4.96
385 386 0.396695 GAGGTAGGTGACGATGGGGA 60.397 60.000 0.00 0.00 0.00 4.81
386 387 0.042131 AGGTAGGTGACGATGGGGAA 59.958 55.000 0.00 0.00 0.00 3.97
387 388 0.464452 GGTAGGTGACGATGGGGAAG 59.536 60.000 0.00 0.00 0.00 3.46
388 389 1.481871 GTAGGTGACGATGGGGAAGA 58.518 55.000 0.00 0.00 0.00 2.87
389 390 1.829222 GTAGGTGACGATGGGGAAGAA 59.171 52.381 0.00 0.00 0.00 2.52
390 391 1.584724 AGGTGACGATGGGGAAGAAT 58.415 50.000 0.00 0.00 0.00 2.40
391 392 1.210478 AGGTGACGATGGGGAAGAATG 59.790 52.381 0.00 0.00 0.00 2.67
392 393 1.668419 GTGACGATGGGGAAGAATGG 58.332 55.000 0.00 0.00 0.00 3.16
393 394 1.209504 GTGACGATGGGGAAGAATGGA 59.790 52.381 0.00 0.00 0.00 3.41
394 395 2.126882 TGACGATGGGGAAGAATGGAT 58.873 47.619 0.00 0.00 0.00 3.41
395 396 3.071023 GTGACGATGGGGAAGAATGGATA 59.929 47.826 0.00 0.00 0.00 2.59
396 397 3.714280 TGACGATGGGGAAGAATGGATAA 59.286 43.478 0.00 0.00 0.00 1.75
397 398 4.202357 TGACGATGGGGAAGAATGGATAAG 60.202 45.833 0.00 0.00 0.00 1.73
398 399 3.073062 ACGATGGGGAAGAATGGATAAGG 59.927 47.826 0.00 0.00 0.00 2.69
399 400 3.073062 CGATGGGGAAGAATGGATAAGGT 59.927 47.826 0.00 0.00 0.00 3.50
400 401 3.951563 TGGGGAAGAATGGATAAGGTG 57.048 47.619 0.00 0.00 0.00 4.00
401 402 2.513738 TGGGGAAGAATGGATAAGGTGG 59.486 50.000 0.00 0.00 0.00 4.61
402 403 2.783510 GGGGAAGAATGGATAAGGTGGA 59.216 50.000 0.00 0.00 0.00 4.02
403 404 3.204382 GGGGAAGAATGGATAAGGTGGAA 59.796 47.826 0.00 0.00 0.00 3.53
404 405 4.140924 GGGGAAGAATGGATAAGGTGGAAT 60.141 45.833 0.00 0.00 0.00 3.01
405 406 4.829492 GGGAAGAATGGATAAGGTGGAATG 59.171 45.833 0.00 0.00 0.00 2.67
406 407 5.399038 GGGAAGAATGGATAAGGTGGAATGA 60.399 44.000 0.00 0.00 0.00 2.57
407 408 5.767168 GGAAGAATGGATAAGGTGGAATGAG 59.233 44.000 0.00 0.00 0.00 2.90
408 409 5.983333 AGAATGGATAAGGTGGAATGAGT 57.017 39.130 0.00 0.00 0.00 3.41
409 410 5.688807 AGAATGGATAAGGTGGAATGAGTG 58.311 41.667 0.00 0.00 0.00 3.51
410 411 3.931907 TGGATAAGGTGGAATGAGTGG 57.068 47.619 0.00 0.00 0.00 4.00
411 412 2.092429 TGGATAAGGTGGAATGAGTGGC 60.092 50.000 0.00 0.00 0.00 5.01
412 413 2.173569 GGATAAGGTGGAATGAGTGGCT 59.826 50.000 0.00 0.00 0.00 4.75
413 414 2.787473 TAAGGTGGAATGAGTGGCTG 57.213 50.000 0.00 0.00 0.00 4.85
414 415 0.773644 AAGGTGGAATGAGTGGCTGT 59.226 50.000 0.00 0.00 0.00 4.40
415 416 0.773644 AGGTGGAATGAGTGGCTGTT 59.226 50.000 0.00 0.00 0.00 3.16
416 417 0.883833 GGTGGAATGAGTGGCTGTTG 59.116 55.000 0.00 0.00 0.00 3.33
417 418 1.609208 GTGGAATGAGTGGCTGTTGT 58.391 50.000 0.00 0.00 0.00 3.32
418 419 1.956477 GTGGAATGAGTGGCTGTTGTT 59.044 47.619 0.00 0.00 0.00 2.83
419 420 3.146066 GTGGAATGAGTGGCTGTTGTTA 58.854 45.455 0.00 0.00 0.00 2.41
420 421 3.568007 GTGGAATGAGTGGCTGTTGTTAA 59.432 43.478 0.00 0.00 0.00 2.01
421 422 3.820467 TGGAATGAGTGGCTGTTGTTAAG 59.180 43.478 0.00 0.00 0.00 1.85
422 423 4.072131 GGAATGAGTGGCTGTTGTTAAGA 58.928 43.478 0.00 0.00 0.00 2.10
423 424 4.154918 GGAATGAGTGGCTGTTGTTAAGAG 59.845 45.833 0.00 0.00 0.00 2.85
424 425 4.623932 ATGAGTGGCTGTTGTTAAGAGA 57.376 40.909 0.00 0.00 0.00 3.10
425 426 3.995199 TGAGTGGCTGTTGTTAAGAGAG 58.005 45.455 0.00 0.00 0.00 3.20
426 427 3.641436 TGAGTGGCTGTTGTTAAGAGAGA 59.359 43.478 0.00 0.00 0.00 3.10
427 428 4.284490 TGAGTGGCTGTTGTTAAGAGAGAT 59.716 41.667 0.00 0.00 0.00 2.75
428 429 5.480422 TGAGTGGCTGTTGTTAAGAGAGATA 59.520 40.000 0.00 0.00 0.00 1.98
429 430 6.014584 TGAGTGGCTGTTGTTAAGAGAGATAA 60.015 38.462 0.00 0.00 0.00 1.75
430 431 6.402222 AGTGGCTGTTGTTAAGAGAGATAAG 58.598 40.000 0.00 0.00 0.00 1.73
431 432 6.211584 AGTGGCTGTTGTTAAGAGAGATAAGA 59.788 38.462 0.00 0.00 0.00 2.10
432 433 6.533367 GTGGCTGTTGTTAAGAGAGATAAGAG 59.467 42.308 0.00 0.00 0.00 2.85
433 434 5.522097 GGCTGTTGTTAAGAGAGATAAGAGC 59.478 44.000 0.00 0.00 34.77 4.09
434 435 5.522097 GCTGTTGTTAAGAGAGATAAGAGCC 59.478 44.000 0.00 0.00 30.89 4.70
435 436 5.978814 TGTTGTTAAGAGAGATAAGAGCCC 58.021 41.667 0.00 0.00 0.00 5.19
436 437 4.920640 TGTTAAGAGAGATAAGAGCCCG 57.079 45.455 0.00 0.00 0.00 6.13
437 438 4.279145 TGTTAAGAGAGATAAGAGCCCGT 58.721 43.478 0.00 0.00 0.00 5.28
438 439 4.098044 TGTTAAGAGAGATAAGAGCCCGTG 59.902 45.833 0.00 0.00 0.00 4.94
439 440 1.698506 AGAGAGATAAGAGCCCGTGG 58.301 55.000 0.00 0.00 0.00 4.94
440 441 0.676736 GAGAGATAAGAGCCCGTGGG 59.323 60.000 0.00 0.00 38.57 4.61
452 453 1.933021 CCCGTGGGCCTATATACAGA 58.067 55.000 4.53 0.00 0.00 3.41
453 454 1.825474 CCCGTGGGCCTATATACAGAG 59.175 57.143 4.53 0.00 0.00 3.35
454 455 1.825474 CCGTGGGCCTATATACAGAGG 59.175 57.143 4.53 0.00 36.14 3.69
455 456 2.556782 CCGTGGGCCTATATACAGAGGA 60.557 54.545 4.53 0.00 34.88 3.71
456 457 2.492484 CGTGGGCCTATATACAGAGGAC 59.508 54.545 4.53 0.00 40.87 3.85
457 458 2.492484 GTGGGCCTATATACAGAGGACG 59.508 54.545 4.53 0.00 42.75 4.79
458 459 2.109480 TGGGCCTATATACAGAGGACGT 59.891 50.000 4.53 0.00 42.75 4.34
459 460 2.492484 GGGCCTATATACAGAGGACGTG 59.508 54.545 0.84 0.00 42.75 4.49
460 461 2.492484 GGCCTATATACAGAGGACGTGG 59.508 54.545 0.00 0.00 34.88 4.94
461 462 2.094649 GCCTATATACAGAGGACGTGGC 60.095 54.545 0.00 0.00 34.88 5.01
462 463 2.161808 CCTATATACAGAGGACGTGGCG 59.838 54.545 0.00 0.00 34.88 5.69
463 464 0.959553 ATATACAGAGGACGTGGCGG 59.040 55.000 0.00 0.00 0.00 6.13
464 465 1.105167 TATACAGAGGACGTGGCGGG 61.105 60.000 0.00 0.00 0.00 6.13
465 466 3.750679 TATACAGAGGACGTGGCGGGT 62.751 57.143 0.00 0.00 0.00 5.28
466 467 4.436998 CAGAGGACGTGGCGGGTC 62.437 72.222 0.00 0.00 0.00 4.46
506 507 3.785499 GCTCGACCGGCGGAAAAC 61.785 66.667 35.78 18.54 41.33 2.43
507 508 2.048503 CTCGACCGGCGGAAAACT 60.049 61.111 35.78 9.95 41.33 2.66
508 509 2.048877 TCGACCGGCGGAAAACTC 60.049 61.111 35.78 18.42 41.33 3.01
509 510 3.475774 CGACCGGCGGAAAACTCG 61.476 66.667 35.78 26.29 36.03 4.18
510 511 2.356673 GACCGGCGGAAAACTCGT 60.357 61.111 35.78 7.12 0.00 4.18
511 512 1.080569 GACCGGCGGAAAACTCGTA 60.081 57.895 35.78 0.00 0.00 3.43
512 513 1.347097 GACCGGCGGAAAACTCGTAC 61.347 60.000 35.78 6.34 0.00 3.67
513 514 2.438954 CCGGCGGAAAACTCGTACG 61.439 63.158 24.41 9.53 0.00 3.67
514 515 2.438954 CGGCGGAAAACTCGTACGG 61.439 63.158 16.52 8.79 0.00 4.02
515 516 1.373371 GGCGGAAAACTCGTACGGT 60.373 57.895 16.52 9.48 0.00 4.83
516 517 1.347097 GGCGGAAAACTCGTACGGTC 61.347 60.000 16.52 5.47 0.00 4.79
517 518 1.347097 GCGGAAAACTCGTACGGTCC 61.347 60.000 16.52 12.88 0.00 4.46
518 519 1.067199 CGGAAAACTCGTACGGTCCG 61.067 60.000 16.52 19.70 41.71 4.79
519 520 0.039165 GGAAAACTCGTACGGTCCGT 60.039 55.000 22.66 22.66 44.35 4.69
520 521 1.331241 GAAAACTCGTACGGTCCGTC 58.669 55.000 22.74 11.73 41.54 4.79
521 522 0.385974 AAAACTCGTACGGTCCGTCG 60.386 55.000 22.74 22.44 41.54 5.12
522 523 2.187599 AAACTCGTACGGTCCGTCGG 62.188 60.000 22.74 14.13 41.54 4.79
523 524 4.527157 CTCGTACGGTCCGTCGGC 62.527 72.222 22.74 11.56 41.54 5.54
526 527 4.783734 GTACGGTCCGTCGGCACC 62.784 72.222 22.74 17.91 41.54 5.01
529 530 4.973055 CGGTCCGTCGGCACCAAA 62.973 66.667 23.81 0.00 32.33 3.28
530 531 3.351416 GGTCCGTCGGCACCAAAC 61.351 66.667 21.13 8.55 32.33 2.93
531 532 3.708734 GTCCGTCGGCACCAAACG 61.709 66.667 6.34 4.97 36.22 3.60
532 533 4.224274 TCCGTCGGCACCAAACGT 62.224 61.111 6.34 0.00 34.71 3.99
533 534 3.273834 CCGTCGGCACCAAACGTT 61.274 61.111 0.00 0.00 34.71 3.99
534 535 2.710698 CGTCGGCACCAAACGTTT 59.289 55.556 7.96 7.96 0.00 3.60
535 536 1.368374 CGTCGGCACCAAACGTTTC 60.368 57.895 11.37 0.00 0.00 2.78
536 537 1.009335 GTCGGCACCAAACGTTTCC 60.009 57.895 11.37 8.47 0.00 3.13
537 538 2.188161 TCGGCACCAAACGTTTCCC 61.188 57.895 11.37 8.33 0.00 3.97
538 539 2.190841 CGGCACCAAACGTTTCCCT 61.191 57.895 11.37 0.00 0.00 4.20
539 540 1.730451 CGGCACCAAACGTTTCCCTT 61.730 55.000 11.37 0.00 0.00 3.95
540 541 0.031585 GGCACCAAACGTTTCCCTTC 59.968 55.000 11.37 0.00 0.00 3.46
541 542 0.741915 GCACCAAACGTTTCCCTTCA 59.258 50.000 11.37 0.00 0.00 3.02
542 543 1.339929 GCACCAAACGTTTCCCTTCAT 59.660 47.619 11.37 0.00 0.00 2.57
543 544 2.554893 GCACCAAACGTTTCCCTTCATA 59.445 45.455 11.37 0.00 0.00 2.15
544 545 3.192633 GCACCAAACGTTTCCCTTCATAT 59.807 43.478 11.37 0.00 0.00 1.78
545 546 4.396790 GCACCAAACGTTTCCCTTCATATA 59.603 41.667 11.37 0.00 0.00 0.86
546 547 5.067283 GCACCAAACGTTTCCCTTCATATAT 59.933 40.000 11.37 0.00 0.00 0.86
547 548 6.405397 GCACCAAACGTTTCCCTTCATATATT 60.405 38.462 11.37 0.00 0.00 1.28
548 549 7.543756 CACCAAACGTTTCCCTTCATATATTT 58.456 34.615 11.37 0.00 0.00 1.40
549 550 7.487829 CACCAAACGTTTCCCTTCATATATTTG 59.512 37.037 11.37 0.00 0.00 2.32
550 551 6.978080 CCAAACGTTTCCCTTCATATATTTGG 59.022 38.462 11.37 0.03 37.20 3.28
551 552 7.363443 CCAAACGTTTCCCTTCATATATTTGGT 60.363 37.037 11.37 0.00 38.23 3.67
552 553 6.693315 ACGTTTCCCTTCATATATTTGGTG 57.307 37.500 0.00 0.00 0.00 4.17
553 554 6.419791 ACGTTTCCCTTCATATATTTGGTGA 58.580 36.000 0.00 0.00 0.00 4.02
554 555 6.542370 ACGTTTCCCTTCATATATTTGGTGAG 59.458 38.462 0.00 0.00 0.00 3.51
555 556 6.765989 CGTTTCCCTTCATATATTTGGTGAGA 59.234 38.462 0.00 0.00 0.00 3.27
556 557 7.282224 CGTTTCCCTTCATATATTTGGTGAGAA 59.718 37.037 0.00 0.00 0.00 2.87
557 558 8.966868 GTTTCCCTTCATATATTTGGTGAGAAA 58.033 33.333 0.00 0.00 0.00 2.52
558 559 9.540538 TTTCCCTTCATATATTTGGTGAGAAAA 57.459 29.630 0.00 0.00 0.00 2.29
559 560 8.752005 TCCCTTCATATATTTGGTGAGAAAAG 57.248 34.615 0.00 0.00 0.00 2.27
560 561 8.336235 TCCCTTCATATATTTGGTGAGAAAAGT 58.664 33.333 0.00 0.00 0.00 2.66
561 562 8.971073 CCCTTCATATATTTGGTGAGAAAAGTT 58.029 33.333 0.00 0.00 0.00 2.66
563 564 9.708222 CTTCATATATTTGGTGAGAAAAGTTCG 57.292 33.333 0.00 0.00 34.02 3.95
564 565 8.208718 TCATATATTTGGTGAGAAAAGTTCGG 57.791 34.615 0.00 0.00 34.02 4.30
565 566 8.044309 TCATATATTTGGTGAGAAAAGTTCGGA 58.956 33.333 0.00 0.00 34.02 4.55
566 567 8.840321 CATATATTTGGTGAGAAAAGTTCGGAT 58.160 33.333 0.00 0.00 34.02 4.18
567 568 4.829064 TTTGGTGAGAAAAGTTCGGATG 57.171 40.909 0.00 0.00 34.02 3.51
568 569 2.151202 TGGTGAGAAAAGTTCGGATGC 58.849 47.619 0.00 0.00 34.02 3.91
569 570 2.151202 GGTGAGAAAAGTTCGGATGCA 58.849 47.619 0.00 0.00 34.02 3.96
570 571 2.160417 GGTGAGAAAAGTTCGGATGCAG 59.840 50.000 0.00 0.00 34.02 4.41
571 572 3.067106 GTGAGAAAAGTTCGGATGCAGA 58.933 45.455 0.00 0.00 34.02 4.26
572 573 3.124297 GTGAGAAAAGTTCGGATGCAGAG 59.876 47.826 0.00 0.00 34.02 3.35
573 574 2.079925 AGAAAAGTTCGGATGCAGAGC 58.920 47.619 0.00 0.00 34.02 4.09
574 575 2.079925 GAAAAGTTCGGATGCAGAGCT 58.920 47.619 0.00 0.00 0.00 4.09
575 576 2.191128 AAAGTTCGGATGCAGAGCTT 57.809 45.000 0.00 0.00 40.12 3.74
576 577 1.731720 AAGTTCGGATGCAGAGCTTC 58.268 50.000 0.00 0.00 34.80 3.86
577 578 0.107945 AGTTCGGATGCAGAGCTTCC 60.108 55.000 12.43 12.43 45.59 3.46
578 579 1.092345 GTTCGGATGCAGAGCTTCCC 61.092 60.000 15.59 1.89 46.09 3.97
579 580 2.578163 TTCGGATGCAGAGCTTCCCG 62.578 60.000 15.59 12.48 46.09 5.14
580 581 2.903357 GGATGCAGAGCTTCCCGA 59.097 61.111 11.63 0.00 44.04 5.14
581 582 1.449353 GGATGCAGAGCTTCCCGAT 59.551 57.895 11.63 0.00 44.04 4.18
582 583 0.681733 GGATGCAGAGCTTCCCGATA 59.318 55.000 11.63 0.00 44.04 2.92
583 584 1.606737 GGATGCAGAGCTTCCCGATAC 60.607 57.143 11.63 0.00 44.04 2.24
584 585 0.394565 ATGCAGAGCTTCCCGATACC 59.605 55.000 0.00 0.00 0.00 2.73
585 586 0.975556 TGCAGAGCTTCCCGATACCA 60.976 55.000 0.00 0.00 0.00 3.25
586 587 0.178068 GCAGAGCTTCCCGATACCAA 59.822 55.000 0.00 0.00 0.00 3.67
587 588 1.406887 GCAGAGCTTCCCGATACCAAA 60.407 52.381 0.00 0.00 0.00 3.28
588 589 2.939640 GCAGAGCTTCCCGATACCAAAA 60.940 50.000 0.00 0.00 0.00 2.44
589 590 3.545703 CAGAGCTTCCCGATACCAAAAT 58.454 45.455 0.00 0.00 0.00 1.82
590 591 3.313526 CAGAGCTTCCCGATACCAAAATG 59.686 47.826 0.00 0.00 0.00 2.32
591 592 2.618709 GAGCTTCCCGATACCAAAATGG 59.381 50.000 0.00 0.00 45.02 3.16
592 593 2.241176 AGCTTCCCGATACCAAAATGGA 59.759 45.455 2.85 0.00 40.96 3.41
593 594 3.020984 GCTTCCCGATACCAAAATGGAA 58.979 45.455 2.85 0.00 40.96 3.53
600 601 6.893005 TCCCGATACCAAAATGGAATAAAACT 59.107 34.615 2.85 0.00 40.96 2.66
642 643 3.510388 TGACTTGATCGTCTAAGCAGG 57.490 47.619 2.96 0.00 35.00 4.85
651 652 1.199327 CGTCTAAGCAGGTCTTCACGA 59.801 52.381 0.00 0.00 40.74 4.35
669 670 2.763627 GATTTGCGTGGTTGGTGGGC 62.764 60.000 0.00 0.00 0.00 5.36
692 693 1.686052 TCATTGGCAAAAGCCGAACTT 59.314 42.857 3.01 0.00 41.70 2.66
698 699 1.335964 GCAAAAGCCGAACTTCCTTCC 60.336 52.381 0.00 0.00 37.75 3.46
715 716 4.020218 TCCTTCCGTATCATCATCCAATCC 60.020 45.833 0.00 0.00 0.00 3.01
733 734 5.226396 CAATCCGTAGAATGACCTCTGATC 58.774 45.833 0.00 0.00 0.00 2.92
737 738 4.275196 CCGTAGAATGACCTCTGATCGTAA 59.725 45.833 0.00 0.00 0.00 3.18
753 754 2.489329 TCGTAAAGTTGTACTCCCTCCG 59.511 50.000 0.00 0.00 0.00 4.63
755 756 3.671702 CGTAAAGTTGTACTCCCTCCGTC 60.672 52.174 0.00 0.00 0.00 4.79
756 757 1.264295 AAGTTGTACTCCCTCCGTCC 58.736 55.000 0.00 0.00 0.00 4.79
757 758 0.964358 AGTTGTACTCCCTCCGTCCG 60.964 60.000 0.00 0.00 0.00 4.79
758 759 2.345760 TTGTACTCCCTCCGTCCGC 61.346 63.158 0.00 0.00 0.00 5.54
759 760 3.525545 GTACTCCCTCCGTCCGCC 61.526 72.222 0.00 0.00 0.00 6.13
761 762 3.369410 TACTCCCTCCGTCCGCCAT 62.369 63.158 0.00 0.00 0.00 4.40
762 763 2.866523 TACTCCCTCCGTCCGCCATT 62.867 60.000 0.00 0.00 0.00 3.16
764 765 2.045340 CCCTCCGTCCGCCATTTT 60.045 61.111 0.00 0.00 0.00 1.82
765 766 2.406616 CCCTCCGTCCGCCATTTTG 61.407 63.158 0.00 0.00 0.00 2.44
766 767 1.376683 CCTCCGTCCGCCATTTTGA 60.377 57.895 0.00 0.00 0.00 2.69
769 770 0.035915 TCCGTCCGCCATTTTGATGA 60.036 50.000 0.00 0.00 0.00 2.92
770 771 0.378257 CCGTCCGCCATTTTGATGAG 59.622 55.000 0.00 0.00 0.00 2.90
771 772 1.368641 CGTCCGCCATTTTGATGAGA 58.631 50.000 0.00 0.00 0.00 3.27
772 773 1.737236 CGTCCGCCATTTTGATGAGAA 59.263 47.619 0.00 0.00 0.00 2.87
773 774 2.223112 CGTCCGCCATTTTGATGAGAAG 60.223 50.000 0.00 0.00 0.00 2.85
775 776 3.938963 GTCCGCCATTTTGATGAGAAGTA 59.061 43.478 0.00 0.00 0.00 2.24
777 778 5.066505 GTCCGCCATTTTGATGAGAAGTATT 59.933 40.000 0.00 0.00 0.00 1.89
778 779 5.652014 TCCGCCATTTTGATGAGAAGTATTT 59.348 36.000 0.00 0.00 0.00 1.40
779 780 6.152661 TCCGCCATTTTGATGAGAAGTATTTT 59.847 34.615 0.00 0.00 0.00 1.82
780 781 6.473455 CCGCCATTTTGATGAGAAGTATTTTC 59.527 38.462 0.00 0.00 0.00 2.29
781 782 6.195244 CGCCATTTTGATGAGAAGTATTTTCG 59.805 38.462 0.00 0.00 0.00 3.46
782 783 6.473455 GCCATTTTGATGAGAAGTATTTTCGG 59.527 38.462 0.00 0.00 0.00 4.30
785 848 6.403333 TTTGATGAGAAGTATTTTCGGACG 57.597 37.500 0.00 0.00 0.00 4.79
803 866 4.087182 GGACGGAGGGAGTATCATCAATA 58.913 47.826 0.00 0.00 36.25 1.90
813 876 7.233553 AGGGAGTATCATCAATACGATCTTCAA 59.766 37.037 0.00 0.00 44.27 2.69
822 885 7.848223 TCAATACGATCTTCAACATGATGTT 57.152 32.000 4.72 4.72 42.08 2.71
898 961 1.269723 CTATTATGGCCTCACGCGAGA 59.730 52.381 15.93 10.37 42.34 4.04
938 1002 1.892474 GGCAACAACAGAGGGCATTTA 59.108 47.619 0.00 0.00 0.00 1.40
972 1036 5.907197 AGCACGTCCAGATAATTTTATCG 57.093 39.130 5.00 0.00 43.30 2.92
1146 1210 0.875908 CTGATACCACACGCATCGGG 60.876 60.000 0.00 0.00 35.82 5.14
1938 2072 1.444553 GCTCTACGTGTCGCTGCTT 60.445 57.895 0.00 0.00 0.00 3.91
2050 2185 1.067495 ACTGTGAAAGCCTACGAGAGC 60.067 52.381 0.00 0.00 0.00 4.09
2071 2206 2.151881 TGGTTGATGCAATGCAACAC 57.848 45.000 17.66 11.34 44.59 3.32
2104 2242 1.174712 CCTGCTGTGTTCCCTTGTGG 61.175 60.000 0.00 0.00 0.00 4.17
2151 2290 3.743521 TGTTCATGCTTTACAGTGCTCT 58.256 40.909 0.00 0.00 0.00 4.09
2238 2378 7.072454 TCCTATAGTCCTATTTGGCAAATCAGT 59.928 37.037 27.42 17.20 35.26 3.41
2298 2438 6.294473 AGAATATTGAATGTAGCTCACCCTG 58.706 40.000 0.00 0.00 0.00 4.45
2320 2469 4.094590 TGTGTTAACGGGTTATATTTGCCG 59.905 41.667 0.26 0.00 0.00 5.69
2482 2636 0.249120 TGGTGTAGGCGATGTGAAGG 59.751 55.000 0.00 0.00 0.00 3.46
2669 2847 6.018507 GCAGAAGAAAACCTTACGTGAACTAA 60.019 38.462 0.00 0.00 34.68 2.24
2683 2861 4.497507 CGTGAACTAATCAGATCGCAGGTA 60.498 45.833 0.00 0.00 39.19 3.08
2779 2967 2.676471 GGCGCATGAGTTGGGGTT 60.676 61.111 10.83 0.00 38.66 4.11
2842 3044 6.594547 ACGTTAGCTTATCCTCTTTCCTTTTC 59.405 38.462 0.00 0.00 0.00 2.29
2847 3053 8.116651 AGCTTATCCTCTTTCCTTTTCTTTTC 57.883 34.615 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.076187 TGCTGGAACCAGAGAGAGAGA 59.924 52.381 22.96 0.00 46.30 3.10
1 2 1.554836 TGCTGGAACCAGAGAGAGAG 58.445 55.000 22.96 0.00 46.30 3.20
2 3 2.015456 TTGCTGGAACCAGAGAGAGA 57.985 50.000 22.96 0.74 46.30 3.10
3 4 2.810852 GTTTTGCTGGAACCAGAGAGAG 59.189 50.000 22.96 0.00 46.30 3.20
27 28 6.368516 CGGTTCAAAATATTGTGAATGGCTTT 59.631 34.615 21.24 0.00 36.23 3.51
34 35 4.279671 ACCAGCGGTTCAAAATATTGTGAA 59.720 37.500 15.76 15.76 37.79 3.18
41 42 1.957177 TGCAACCAGCGGTTCAAAATA 59.043 42.857 9.57 0.00 43.05 1.40
47 48 1.648467 GGAGATGCAACCAGCGGTTC 61.648 60.000 9.57 6.52 43.05 3.62
101 102 0.798776 GAGATGCTGGAACCAACACG 59.201 55.000 0.00 0.00 0.00 4.49
114 115 0.590195 GCAACCATCATCGGAGATGC 59.410 55.000 11.12 0.56 45.12 3.91
117 118 0.462581 GCTGCAACCATCATCGGAGA 60.463 55.000 0.00 0.00 45.75 3.71
118 119 0.463295 AGCTGCAACCATCATCGGAG 60.463 55.000 1.02 0.00 0.00 4.63
119 120 0.035152 AAGCTGCAACCATCATCGGA 60.035 50.000 1.02 0.00 0.00 4.55
120 121 0.813184 AAAGCTGCAACCATCATCGG 59.187 50.000 1.02 0.00 0.00 4.18
121 122 2.256174 CAAAAGCTGCAACCATCATCG 58.744 47.619 1.02 0.00 0.00 3.84
122 123 2.613691 CCAAAAGCTGCAACCATCATC 58.386 47.619 1.02 0.00 0.00 2.92
123 124 1.338389 GCCAAAAGCTGCAACCATCAT 60.338 47.619 1.02 0.00 38.99 2.45
124 125 0.033781 GCCAAAAGCTGCAACCATCA 59.966 50.000 1.02 0.00 38.99 3.07
125 126 1.010419 CGCCAAAAGCTGCAACCATC 61.010 55.000 1.02 0.00 40.39 3.51
126 127 1.005867 CGCCAAAAGCTGCAACCAT 60.006 52.632 1.02 0.00 40.39 3.55
127 128 2.348605 GACGCCAAAAGCTGCAACCA 62.349 55.000 1.02 0.00 40.39 3.67
128 129 1.661509 GACGCCAAAAGCTGCAACC 60.662 57.895 1.02 0.00 40.39 3.77
129 130 2.010817 CGACGCCAAAAGCTGCAAC 61.011 57.895 1.02 0.00 40.39 4.17
130 131 2.331098 CGACGCCAAAAGCTGCAA 59.669 55.556 1.02 0.00 40.39 4.08
131 132 4.326766 GCGACGCCAAAAGCTGCA 62.327 61.111 9.14 0.00 40.39 4.41
149 150 3.827784 GTGCACGCAGCTACGACG 61.828 66.667 14.52 4.74 45.94 5.12
150 151 3.827784 CGTGCACGCAGCTACGAC 61.828 66.667 28.16 5.26 44.69 4.34
169 170 0.322456 TTGGAGATTGCTGGAACCGG 60.322 55.000 0.00 0.00 0.00 5.28
170 171 0.804989 GTTGGAGATTGCTGGAACCG 59.195 55.000 0.00 0.00 0.00 4.44
171 172 1.909700 TGTTGGAGATTGCTGGAACC 58.090 50.000 0.00 0.00 0.00 3.62
172 173 2.029918 GGTTGTTGGAGATTGCTGGAAC 60.030 50.000 0.00 0.00 0.00 3.62
173 174 2.238521 GGTTGTTGGAGATTGCTGGAA 58.761 47.619 0.00 0.00 0.00 3.53
174 175 1.144708 TGGTTGTTGGAGATTGCTGGA 59.855 47.619 0.00 0.00 0.00 3.86
175 176 1.619654 TGGTTGTTGGAGATTGCTGG 58.380 50.000 0.00 0.00 0.00 4.85
176 177 3.006110 ACAATGGTTGTTGGAGATTGCTG 59.994 43.478 0.00 0.00 42.22 4.41
177 178 3.233507 ACAATGGTTGTTGGAGATTGCT 58.766 40.909 0.00 0.00 42.22 3.91
178 179 3.665745 ACAATGGTTGTTGGAGATTGC 57.334 42.857 0.00 0.00 42.22 3.56
179 180 4.460382 AGCTACAATGGTTGTTGGAGATTG 59.540 41.667 3.15 0.00 41.65 2.67
180 181 4.666512 AGCTACAATGGTTGTTGGAGATT 58.333 39.130 3.15 0.00 41.65 2.40
181 182 4.307032 AGCTACAATGGTTGTTGGAGAT 57.693 40.909 3.15 0.00 41.65 2.75
182 183 3.788227 AGCTACAATGGTTGTTGGAGA 57.212 42.857 3.15 0.00 41.65 3.71
183 184 4.853924 AAAGCTACAATGGTTGTTGGAG 57.146 40.909 0.20 0.00 42.22 3.86
184 185 5.606348 AAAAAGCTACAATGGTTGTTGGA 57.394 34.783 0.20 0.00 42.22 3.53
203 204 6.183361 TGGGAGATTCTGGAACTAGTGAAAAA 60.183 38.462 0.00 0.00 0.00 1.94
204 205 5.309543 TGGGAGATTCTGGAACTAGTGAAAA 59.690 40.000 0.00 0.00 0.00 2.29
205 206 4.844085 TGGGAGATTCTGGAACTAGTGAAA 59.156 41.667 0.00 0.00 0.00 2.69
206 207 4.425772 TGGGAGATTCTGGAACTAGTGAA 58.574 43.478 0.00 0.00 0.00 3.18
207 208 4.026744 CTGGGAGATTCTGGAACTAGTGA 58.973 47.826 0.00 0.00 0.00 3.41
208 209 4.026744 TCTGGGAGATTCTGGAACTAGTG 58.973 47.826 0.00 0.00 0.00 2.74
209 210 4.338795 TCTGGGAGATTCTGGAACTAGT 57.661 45.455 0.00 0.00 0.00 2.57
210 211 5.046304 TGTTTCTGGGAGATTCTGGAACTAG 60.046 44.000 0.00 0.00 0.00 2.57
211 212 4.844085 TGTTTCTGGGAGATTCTGGAACTA 59.156 41.667 0.00 0.00 0.00 2.24
212 213 3.652869 TGTTTCTGGGAGATTCTGGAACT 59.347 43.478 0.00 0.00 0.00 3.01
213 214 4.006319 CTGTTTCTGGGAGATTCTGGAAC 58.994 47.826 0.00 0.00 0.00 3.62
214 215 3.652869 ACTGTTTCTGGGAGATTCTGGAA 59.347 43.478 0.00 0.00 0.00 3.53
215 216 3.251484 ACTGTTTCTGGGAGATTCTGGA 58.749 45.455 0.00 0.00 0.00 3.86
216 217 3.710209 ACTGTTTCTGGGAGATTCTGG 57.290 47.619 0.00 0.00 0.00 3.86
217 218 3.190118 GCAACTGTTTCTGGGAGATTCTG 59.810 47.826 0.00 0.00 0.00 3.02
218 219 3.181440 TGCAACTGTTTCTGGGAGATTCT 60.181 43.478 0.00 0.00 0.00 2.40
219 220 3.149196 TGCAACTGTTTCTGGGAGATTC 58.851 45.455 0.00 0.00 0.00 2.52
220 221 3.228188 TGCAACTGTTTCTGGGAGATT 57.772 42.857 0.00 0.00 0.00 2.40
221 222 2.887152 GTTGCAACTGTTTCTGGGAGAT 59.113 45.455 22.36 0.00 0.00 2.75
222 223 2.092429 AGTTGCAACTGTTTCTGGGAGA 60.092 45.455 30.66 0.00 37.98 3.71
223 224 2.301346 AGTTGCAACTGTTTCTGGGAG 58.699 47.619 30.66 0.00 37.98 4.30
224 225 2.435372 AGTTGCAACTGTTTCTGGGA 57.565 45.000 30.66 0.00 37.98 4.37
225 226 2.223805 GGAAGTTGCAACTGTTTCTGGG 60.224 50.000 31.73 0.00 39.66 4.45
226 227 2.541588 CGGAAGTTGCAACTGTTTCTGG 60.542 50.000 31.73 16.82 39.66 3.86
227 228 2.541588 CCGGAAGTTGCAACTGTTTCTG 60.542 50.000 31.73 26.74 39.66 3.02
228 229 1.676006 CCGGAAGTTGCAACTGTTTCT 59.324 47.619 31.73 16.48 39.66 2.52
229 230 1.864029 GCCGGAAGTTGCAACTGTTTC 60.864 52.381 31.73 23.93 39.66 2.78
230 231 0.102300 GCCGGAAGTTGCAACTGTTT 59.898 50.000 31.73 17.27 39.66 2.83
231 232 1.034838 TGCCGGAAGTTGCAACTGTT 61.035 50.000 31.73 18.05 39.66 3.16
232 233 0.823356 ATGCCGGAAGTTGCAACTGT 60.823 50.000 31.73 20.87 41.50 3.55
233 234 0.109597 GATGCCGGAAGTTGCAACTG 60.110 55.000 31.73 19.90 41.50 3.16
234 235 1.577328 CGATGCCGGAAGTTGCAACT 61.577 55.000 26.36 26.36 41.50 3.16
235 236 1.154225 CGATGCCGGAAGTTGCAAC 60.154 57.895 22.17 22.17 41.50 4.17
236 237 1.573829 GACGATGCCGGAAGTTGCAA 61.574 55.000 5.05 0.00 41.50 4.08
237 238 2.031919 ACGATGCCGGAAGTTGCA 59.968 55.556 5.05 0.00 42.52 4.08
238 239 2.785258 GACGATGCCGGAAGTTGC 59.215 61.111 5.05 0.00 40.78 4.17
239 240 1.683790 GACGACGATGCCGGAAGTTG 61.684 60.000 5.05 5.15 40.78 3.16
240 241 1.445582 GACGACGATGCCGGAAGTT 60.446 57.895 5.05 0.00 40.78 2.66
241 242 2.181021 GACGACGATGCCGGAAGT 59.819 61.111 5.05 0.00 40.78 3.01
242 243 2.949678 CGACGACGATGCCGGAAG 60.950 66.667 5.05 0.00 42.66 3.46
248 249 3.906649 CAGCTGCGACGACGATGC 61.907 66.667 12.29 13.48 42.66 3.91
249 250 3.906649 GCAGCTGCGACGACGATG 61.907 66.667 25.23 3.56 42.66 3.84
250 251 3.706563 ATGCAGCTGCGACGACGAT 62.707 57.895 32.11 16.29 45.83 3.73
251 252 4.419939 ATGCAGCTGCGACGACGA 62.420 61.111 32.11 14.60 45.83 4.20
252 253 4.200851 CATGCAGCTGCGACGACG 62.201 66.667 32.11 13.45 45.83 5.12
253 254 4.511443 GCATGCAGCTGCGACGAC 62.511 66.667 32.11 16.50 45.83 4.34
255 256 4.516135 CTGCATGCAGCTGCGACG 62.516 66.667 33.18 23.13 45.30 5.12
256 257 4.175489 CCTGCATGCAGCTGCGAC 62.175 66.667 37.11 23.50 45.30 5.19
266 267 4.738998 TGGAACCGGCCCTGCATG 62.739 66.667 13.83 0.00 0.00 4.06
267 268 4.431131 CTGGAACCGGCCCTGCAT 62.431 66.667 13.83 0.00 0.00 3.96
287 288 2.677037 CGAGCTAGTCGTCCCCATTTTT 60.677 50.000 0.00 0.00 44.20 1.94
288 289 1.134788 CGAGCTAGTCGTCCCCATTTT 60.135 52.381 0.00 0.00 44.20 1.82
289 290 0.460311 CGAGCTAGTCGTCCCCATTT 59.540 55.000 0.00 0.00 44.20 2.32
290 291 2.116383 CGAGCTAGTCGTCCCCATT 58.884 57.895 0.00 0.00 44.20 3.16
291 292 3.843304 CGAGCTAGTCGTCCCCAT 58.157 61.111 0.00 0.00 44.20 4.00
305 306 2.470628 CACATCTCTAATCAAGCGCGAG 59.529 50.000 12.10 0.05 0.00 5.03
306 307 2.463876 CACATCTCTAATCAAGCGCGA 58.536 47.619 12.10 0.00 0.00 5.87
307 308 1.524355 CCACATCTCTAATCAAGCGCG 59.476 52.381 0.00 0.00 0.00 6.86
308 309 2.826428 TCCACATCTCTAATCAAGCGC 58.174 47.619 0.00 0.00 0.00 5.92
309 310 4.437239 ACTTCCACATCTCTAATCAAGCG 58.563 43.478 0.00 0.00 0.00 4.68
310 311 5.669477 AGACTTCCACATCTCTAATCAAGC 58.331 41.667 0.00 0.00 0.00 4.01
311 312 9.092876 GTTTAGACTTCCACATCTCTAATCAAG 57.907 37.037 0.00 0.00 0.00 3.02
312 313 8.816894 AGTTTAGACTTCCACATCTCTAATCAA 58.183 33.333 0.00 0.00 29.87 2.57
313 314 8.367660 AGTTTAGACTTCCACATCTCTAATCA 57.632 34.615 0.00 0.00 29.87 2.57
317 318 9.475620 TGATTAGTTTAGACTTCCACATCTCTA 57.524 33.333 0.00 0.00 37.33 2.43
318 319 8.367660 TGATTAGTTTAGACTTCCACATCTCT 57.632 34.615 0.00 0.00 37.33 3.10
319 320 9.606631 ATTGATTAGTTTAGACTTCCACATCTC 57.393 33.333 0.00 0.00 37.33 2.75
320 321 9.388506 CATTGATTAGTTTAGACTTCCACATCT 57.611 33.333 0.00 0.00 37.33 2.90
321 322 8.616076 CCATTGATTAGTTTAGACTTCCACATC 58.384 37.037 0.00 0.00 37.33 3.06
322 323 7.067494 GCCATTGATTAGTTTAGACTTCCACAT 59.933 37.037 0.00 0.00 37.33 3.21
323 324 6.374333 GCCATTGATTAGTTTAGACTTCCACA 59.626 38.462 0.00 0.00 37.33 4.17
324 325 6.456988 CGCCATTGATTAGTTTAGACTTCCAC 60.457 42.308 0.00 0.00 37.33 4.02
325 326 5.584649 CGCCATTGATTAGTTTAGACTTCCA 59.415 40.000 0.00 0.00 37.33 3.53
326 327 5.007724 CCGCCATTGATTAGTTTAGACTTCC 59.992 44.000 0.00 0.00 37.33 3.46
327 328 5.007724 CCCGCCATTGATTAGTTTAGACTTC 59.992 44.000 0.00 0.00 37.33 3.01
328 329 4.881850 CCCGCCATTGATTAGTTTAGACTT 59.118 41.667 0.00 0.00 37.33 3.01
329 330 4.163458 TCCCGCCATTGATTAGTTTAGACT 59.837 41.667 0.00 0.00 39.97 3.24
330 331 4.448210 TCCCGCCATTGATTAGTTTAGAC 58.552 43.478 0.00 0.00 0.00 2.59
331 332 4.444306 CCTCCCGCCATTGATTAGTTTAGA 60.444 45.833 0.00 0.00 0.00 2.10
332 333 3.815401 CCTCCCGCCATTGATTAGTTTAG 59.185 47.826 0.00 0.00 0.00 1.85
333 334 3.434453 CCCTCCCGCCATTGATTAGTTTA 60.434 47.826 0.00 0.00 0.00 2.01
334 335 2.654863 CCTCCCGCCATTGATTAGTTT 58.345 47.619 0.00 0.00 0.00 2.66
335 336 1.133792 CCCTCCCGCCATTGATTAGTT 60.134 52.381 0.00 0.00 0.00 2.24
336 337 0.474184 CCCTCCCGCCATTGATTAGT 59.526 55.000 0.00 0.00 0.00 2.24
337 338 0.250901 CCCCTCCCGCCATTGATTAG 60.251 60.000 0.00 0.00 0.00 1.73
338 339 0.696143 TCCCCTCCCGCCATTGATTA 60.696 55.000 0.00 0.00 0.00 1.75
339 340 1.363530 ATCCCCTCCCGCCATTGATT 61.364 55.000 0.00 0.00 0.00 2.57
340 341 1.775877 ATCCCCTCCCGCCATTGAT 60.776 57.895 0.00 0.00 0.00 2.57
341 342 2.368192 ATCCCCTCCCGCCATTGA 60.368 61.111 0.00 0.00 0.00 2.57
342 343 2.203394 CATCCCCTCCCGCCATTG 60.203 66.667 0.00 0.00 0.00 2.82
343 344 3.501911 CCATCCCCTCCCGCCATT 61.502 66.667 0.00 0.00 0.00 3.16
349 350 4.201122 CTGCTGCCATCCCCTCCC 62.201 72.222 0.00 0.00 0.00 4.30
350 351 3.092511 TCTGCTGCCATCCCCTCC 61.093 66.667 0.00 0.00 0.00 4.30
351 352 2.509916 CTCTGCTGCCATCCCCTC 59.490 66.667 0.00 0.00 0.00 4.30
352 353 2.551856 TACCTCTGCTGCCATCCCCT 62.552 60.000 0.00 0.00 0.00 4.79
353 354 2.049627 CTACCTCTGCTGCCATCCCC 62.050 65.000 0.00 0.00 0.00 4.81
354 355 1.449353 CTACCTCTGCTGCCATCCC 59.551 63.158 0.00 0.00 0.00 3.85
355 356 1.341156 ACCTACCTCTGCTGCCATCC 61.341 60.000 0.00 0.00 0.00 3.51
356 357 0.179062 CACCTACCTCTGCTGCCATC 60.179 60.000 0.00 0.00 0.00 3.51
357 358 0.618680 TCACCTACCTCTGCTGCCAT 60.619 55.000 0.00 0.00 0.00 4.40
358 359 1.229177 TCACCTACCTCTGCTGCCA 60.229 57.895 0.00 0.00 0.00 4.92
359 360 1.219393 GTCACCTACCTCTGCTGCC 59.781 63.158 0.00 0.00 0.00 4.85
360 361 1.153745 CGTCACCTACCTCTGCTGC 60.154 63.158 0.00 0.00 0.00 5.25
361 362 1.107114 ATCGTCACCTACCTCTGCTG 58.893 55.000 0.00 0.00 0.00 4.41
362 363 1.107114 CATCGTCACCTACCTCTGCT 58.893 55.000 0.00 0.00 0.00 4.24
363 364 0.103208 CCATCGTCACCTACCTCTGC 59.897 60.000 0.00 0.00 0.00 4.26
364 365 0.747255 CCCATCGTCACCTACCTCTG 59.253 60.000 0.00 0.00 0.00 3.35
365 366 0.397254 CCCCATCGTCACCTACCTCT 60.397 60.000 0.00 0.00 0.00 3.69
366 367 0.396695 TCCCCATCGTCACCTACCTC 60.397 60.000 0.00 0.00 0.00 3.85
367 368 0.042131 TTCCCCATCGTCACCTACCT 59.958 55.000 0.00 0.00 0.00 3.08
368 369 0.464452 CTTCCCCATCGTCACCTACC 59.536 60.000 0.00 0.00 0.00 3.18
369 370 1.481871 TCTTCCCCATCGTCACCTAC 58.518 55.000 0.00 0.00 0.00 3.18
370 371 2.241281 TTCTTCCCCATCGTCACCTA 57.759 50.000 0.00 0.00 0.00 3.08
371 372 1.210478 CATTCTTCCCCATCGTCACCT 59.790 52.381 0.00 0.00 0.00 4.00
372 373 1.668419 CATTCTTCCCCATCGTCACC 58.332 55.000 0.00 0.00 0.00 4.02
373 374 1.209504 TCCATTCTTCCCCATCGTCAC 59.790 52.381 0.00 0.00 0.00 3.67
374 375 1.578897 TCCATTCTTCCCCATCGTCA 58.421 50.000 0.00 0.00 0.00 4.35
375 376 2.938956 ATCCATTCTTCCCCATCGTC 57.061 50.000 0.00 0.00 0.00 4.20
376 377 3.073062 CCTTATCCATTCTTCCCCATCGT 59.927 47.826 0.00 0.00 0.00 3.73
377 378 3.073062 ACCTTATCCATTCTTCCCCATCG 59.927 47.826 0.00 0.00 0.00 3.84
378 379 4.401925 CACCTTATCCATTCTTCCCCATC 58.598 47.826 0.00 0.00 0.00 3.51
379 380 3.140895 CCACCTTATCCATTCTTCCCCAT 59.859 47.826 0.00 0.00 0.00 4.00
380 381 2.513738 CCACCTTATCCATTCTTCCCCA 59.486 50.000 0.00 0.00 0.00 4.96
381 382 2.783510 TCCACCTTATCCATTCTTCCCC 59.216 50.000 0.00 0.00 0.00 4.81
382 383 4.519906 TTCCACCTTATCCATTCTTCCC 57.480 45.455 0.00 0.00 0.00 3.97
383 384 5.694995 TCATTCCACCTTATCCATTCTTCC 58.305 41.667 0.00 0.00 0.00 3.46
384 385 6.261826 CACTCATTCCACCTTATCCATTCTTC 59.738 42.308 0.00 0.00 0.00 2.87
385 386 6.125029 CACTCATTCCACCTTATCCATTCTT 58.875 40.000 0.00 0.00 0.00 2.52
386 387 5.398353 CCACTCATTCCACCTTATCCATTCT 60.398 44.000 0.00 0.00 0.00 2.40
387 388 4.823989 CCACTCATTCCACCTTATCCATTC 59.176 45.833 0.00 0.00 0.00 2.67
388 389 4.796606 CCACTCATTCCACCTTATCCATT 58.203 43.478 0.00 0.00 0.00 3.16
389 390 3.435601 GCCACTCATTCCACCTTATCCAT 60.436 47.826 0.00 0.00 0.00 3.41
390 391 2.092429 GCCACTCATTCCACCTTATCCA 60.092 50.000 0.00 0.00 0.00 3.41
391 392 2.173569 AGCCACTCATTCCACCTTATCC 59.826 50.000 0.00 0.00 0.00 2.59
392 393 3.209410 CAGCCACTCATTCCACCTTATC 58.791 50.000 0.00 0.00 0.00 1.75
393 394 2.578021 ACAGCCACTCATTCCACCTTAT 59.422 45.455 0.00 0.00 0.00 1.73
394 395 1.985159 ACAGCCACTCATTCCACCTTA 59.015 47.619 0.00 0.00 0.00 2.69
395 396 0.773644 ACAGCCACTCATTCCACCTT 59.226 50.000 0.00 0.00 0.00 3.50
396 397 0.773644 AACAGCCACTCATTCCACCT 59.226 50.000 0.00 0.00 0.00 4.00
397 398 0.883833 CAACAGCCACTCATTCCACC 59.116 55.000 0.00 0.00 0.00 4.61
398 399 1.609208 ACAACAGCCACTCATTCCAC 58.391 50.000 0.00 0.00 0.00 4.02
399 400 2.363306 AACAACAGCCACTCATTCCA 57.637 45.000 0.00 0.00 0.00 3.53
400 401 4.072131 TCTTAACAACAGCCACTCATTCC 58.928 43.478 0.00 0.00 0.00 3.01
401 402 4.997395 TCTCTTAACAACAGCCACTCATTC 59.003 41.667 0.00 0.00 0.00 2.67
402 403 4.973168 TCTCTTAACAACAGCCACTCATT 58.027 39.130 0.00 0.00 0.00 2.57
403 404 4.284490 TCTCTCTTAACAACAGCCACTCAT 59.716 41.667 0.00 0.00 0.00 2.90
404 405 3.641436 TCTCTCTTAACAACAGCCACTCA 59.359 43.478 0.00 0.00 0.00 3.41
405 406 4.258702 TCTCTCTTAACAACAGCCACTC 57.741 45.455 0.00 0.00 0.00 3.51
406 407 4.899352 ATCTCTCTTAACAACAGCCACT 57.101 40.909 0.00 0.00 0.00 4.00
407 408 6.398918 TCTTATCTCTCTTAACAACAGCCAC 58.601 40.000 0.00 0.00 0.00 5.01
408 409 6.605471 TCTTATCTCTCTTAACAACAGCCA 57.395 37.500 0.00 0.00 0.00 4.75
409 410 5.522097 GCTCTTATCTCTCTTAACAACAGCC 59.478 44.000 0.00 0.00 0.00 4.85
410 411 5.522097 GGCTCTTATCTCTCTTAACAACAGC 59.478 44.000 0.00 0.00 0.00 4.40
411 412 6.045955 GGGCTCTTATCTCTCTTAACAACAG 58.954 44.000 0.00 0.00 0.00 3.16
412 413 5.394224 CGGGCTCTTATCTCTCTTAACAACA 60.394 44.000 0.00 0.00 0.00 3.33
413 414 5.044558 CGGGCTCTTATCTCTCTTAACAAC 58.955 45.833 0.00 0.00 0.00 3.32
414 415 4.710375 ACGGGCTCTTATCTCTCTTAACAA 59.290 41.667 0.00 0.00 0.00 2.83
415 416 4.098044 CACGGGCTCTTATCTCTCTTAACA 59.902 45.833 0.00 0.00 0.00 2.41
416 417 4.500035 CCACGGGCTCTTATCTCTCTTAAC 60.500 50.000 0.00 0.00 0.00 2.01
417 418 3.637229 CCACGGGCTCTTATCTCTCTTAA 59.363 47.826 0.00 0.00 0.00 1.85
418 419 3.223435 CCACGGGCTCTTATCTCTCTTA 58.777 50.000 0.00 0.00 0.00 2.10
419 420 2.035632 CCACGGGCTCTTATCTCTCTT 58.964 52.381 0.00 0.00 0.00 2.85
420 421 1.698506 CCACGGGCTCTTATCTCTCT 58.301 55.000 0.00 0.00 0.00 3.10
421 422 0.676736 CCCACGGGCTCTTATCTCTC 59.323 60.000 0.00 0.00 0.00 3.20
422 423 2.827715 CCCACGGGCTCTTATCTCT 58.172 57.895 0.00 0.00 0.00 3.10
433 434 1.825474 CTCTGTATATAGGCCCACGGG 59.175 57.143 0.00 0.00 38.57 5.28
434 435 1.825474 CCTCTGTATATAGGCCCACGG 59.175 57.143 0.00 0.00 0.00 4.94
435 436 2.492484 GTCCTCTGTATATAGGCCCACG 59.508 54.545 0.00 0.00 32.55 4.94
436 437 2.492484 CGTCCTCTGTATATAGGCCCAC 59.508 54.545 0.00 0.00 32.55 4.61
437 438 2.109480 ACGTCCTCTGTATATAGGCCCA 59.891 50.000 0.00 0.00 32.55 5.36
438 439 2.492484 CACGTCCTCTGTATATAGGCCC 59.508 54.545 0.00 0.00 32.55 5.80
439 440 2.492484 CCACGTCCTCTGTATATAGGCC 59.508 54.545 0.00 0.00 32.55 5.19
440 441 2.094649 GCCACGTCCTCTGTATATAGGC 60.095 54.545 0.00 0.00 32.55 3.93
441 442 2.161808 CGCCACGTCCTCTGTATATAGG 59.838 54.545 0.00 0.00 0.00 2.57
442 443 2.161808 CCGCCACGTCCTCTGTATATAG 59.838 54.545 0.00 0.00 0.00 1.31
443 444 2.156917 CCGCCACGTCCTCTGTATATA 58.843 52.381 0.00 0.00 0.00 0.86
444 445 0.959553 CCGCCACGTCCTCTGTATAT 59.040 55.000 0.00 0.00 0.00 0.86
445 446 1.105167 CCCGCCACGTCCTCTGTATA 61.105 60.000 0.00 0.00 0.00 1.47
446 447 2.423898 CCCGCCACGTCCTCTGTAT 61.424 63.158 0.00 0.00 0.00 2.29
447 448 3.066190 CCCGCCACGTCCTCTGTA 61.066 66.667 0.00 0.00 0.00 2.74
449 450 4.436998 GACCCGCCACGTCCTCTG 62.437 72.222 0.00 0.00 0.00 3.35
489 490 3.785499 GTTTTCCGCCGGTCGAGC 61.785 66.667 17.96 4.06 41.67 5.03
490 491 2.048503 AGTTTTCCGCCGGTCGAG 60.049 61.111 17.96 9.36 41.67 4.04
491 492 2.048877 GAGTTTTCCGCCGGTCGA 60.049 61.111 17.96 4.25 41.67 4.20
492 493 2.801113 TACGAGTTTTCCGCCGGTCG 62.801 60.000 10.99 10.99 38.08 4.79
493 494 1.080569 TACGAGTTTTCCGCCGGTC 60.081 57.895 1.63 0.00 0.00 4.79
494 495 1.373371 GTACGAGTTTTCCGCCGGT 60.373 57.895 1.63 0.00 0.00 5.28
495 496 2.438954 CGTACGAGTTTTCCGCCGG 61.439 63.158 10.44 0.00 0.00 6.13
496 497 2.438954 CCGTACGAGTTTTCCGCCG 61.439 63.158 18.76 0.00 0.00 6.46
497 498 1.347097 GACCGTACGAGTTTTCCGCC 61.347 60.000 18.76 0.00 0.00 6.13
498 499 1.347097 GGACCGTACGAGTTTTCCGC 61.347 60.000 18.76 0.16 0.00 5.54
499 500 1.067199 CGGACCGTACGAGTTTTCCG 61.067 60.000 18.76 19.51 40.02 4.30
500 501 0.039165 ACGGACCGTACGAGTTTTCC 60.039 55.000 20.23 12.42 38.73 3.13
501 502 1.331241 GACGGACCGTACGAGTTTTC 58.669 55.000 21.79 0.00 41.37 2.29
502 503 0.385974 CGACGGACCGTACGAGTTTT 60.386 55.000 21.79 0.00 41.37 2.43
503 504 1.207593 CGACGGACCGTACGAGTTT 59.792 57.895 21.79 0.00 41.37 2.66
504 505 2.680913 CCGACGGACCGTACGAGTT 61.681 63.158 28.47 5.64 41.37 3.01
505 506 3.121030 CCGACGGACCGTACGAGT 61.121 66.667 28.47 13.04 41.37 4.18
506 507 4.527157 GCCGACGGACCGTACGAG 62.527 72.222 28.47 21.56 41.37 4.18
509 510 4.783734 GGTGCCGACGGACCGTAC 62.784 72.222 21.79 14.38 41.37 3.67
512 513 4.973055 TTTGGTGCCGACGGACCG 62.973 66.667 20.50 13.61 34.69 4.79
513 514 3.351416 GTTTGGTGCCGACGGACC 61.351 66.667 20.50 21.21 0.00 4.46
514 515 3.708734 CGTTTGGTGCCGACGGAC 61.709 66.667 20.50 12.72 33.45 4.79
515 516 3.736732 AACGTTTGGTGCCGACGGA 62.737 57.895 20.50 0.00 40.82 4.69
516 517 2.704973 GAAACGTTTGGTGCCGACGG 62.705 60.000 20.10 10.29 40.82 4.79
517 518 1.368374 GAAACGTTTGGTGCCGACG 60.368 57.895 20.10 13.00 42.13 5.12
518 519 1.009335 GGAAACGTTTGGTGCCGAC 60.009 57.895 20.10 0.57 0.00 4.79
519 520 2.188161 GGGAAACGTTTGGTGCCGA 61.188 57.895 20.10 0.00 0.00 5.54
520 521 1.730451 AAGGGAAACGTTTGGTGCCG 61.730 55.000 20.10 0.00 34.05 5.69
521 522 0.031585 GAAGGGAAACGTTTGGTGCC 59.968 55.000 20.10 12.96 38.82 5.01
522 523 0.741915 TGAAGGGAAACGTTTGGTGC 59.258 50.000 20.10 3.37 38.82 5.01
523 524 6.693315 ATATATGAAGGGAAACGTTTGGTG 57.307 37.500 20.10 0.00 38.82 4.17
524 525 7.363443 CCAAATATATGAAGGGAAACGTTTGGT 60.363 37.037 20.10 0.00 38.82 3.67
525 526 6.978080 CCAAATATATGAAGGGAAACGTTTGG 59.022 38.462 20.10 4.11 38.82 3.28
526 527 7.487829 CACCAAATATATGAAGGGAAACGTTTG 59.512 37.037 20.10 0.00 38.82 2.93
527 528 7.394923 TCACCAAATATATGAAGGGAAACGTTT 59.605 33.333 14.57 14.57 38.82 3.60
528 529 6.887545 TCACCAAATATATGAAGGGAAACGTT 59.112 34.615 0.00 0.00 42.01 3.99
529 530 6.419791 TCACCAAATATATGAAGGGAAACGT 58.580 36.000 0.00 0.00 0.00 3.99
530 531 6.765989 TCTCACCAAATATATGAAGGGAAACG 59.234 38.462 0.00 0.00 0.00 3.60
531 532 8.519799 TTCTCACCAAATATATGAAGGGAAAC 57.480 34.615 0.00 0.00 0.00 2.78
532 533 9.540538 TTTTCTCACCAAATATATGAAGGGAAA 57.459 29.630 0.00 0.00 0.00 3.13
533 534 9.189156 CTTTTCTCACCAAATATATGAAGGGAA 57.811 33.333 0.00 0.00 0.00 3.97
534 535 8.336235 ACTTTTCTCACCAAATATATGAAGGGA 58.664 33.333 0.00 0.00 0.00 4.20
535 536 8.525290 ACTTTTCTCACCAAATATATGAAGGG 57.475 34.615 0.00 0.00 0.00 3.95
537 538 9.708222 CGAACTTTTCTCACCAAATATATGAAG 57.292 33.333 0.00 0.00 0.00 3.02
538 539 8.673711 CCGAACTTTTCTCACCAAATATATGAA 58.326 33.333 0.00 0.00 0.00 2.57
539 540 8.044309 TCCGAACTTTTCTCACCAAATATATGA 58.956 33.333 0.00 0.00 0.00 2.15
540 541 8.208718 TCCGAACTTTTCTCACCAAATATATG 57.791 34.615 0.00 0.00 0.00 1.78
541 542 8.840321 CATCCGAACTTTTCTCACCAAATATAT 58.160 33.333 0.00 0.00 0.00 0.86
542 543 7.201696 GCATCCGAACTTTTCTCACCAAATATA 60.202 37.037 0.00 0.00 0.00 0.86
543 544 6.404734 GCATCCGAACTTTTCTCACCAAATAT 60.405 38.462 0.00 0.00 0.00 1.28
544 545 5.106317 GCATCCGAACTTTTCTCACCAAATA 60.106 40.000 0.00 0.00 0.00 1.40
545 546 4.321230 GCATCCGAACTTTTCTCACCAAAT 60.321 41.667 0.00 0.00 0.00 2.32
546 547 3.004315 GCATCCGAACTTTTCTCACCAAA 59.996 43.478 0.00 0.00 0.00 3.28
547 548 2.552315 GCATCCGAACTTTTCTCACCAA 59.448 45.455 0.00 0.00 0.00 3.67
548 549 2.151202 GCATCCGAACTTTTCTCACCA 58.849 47.619 0.00 0.00 0.00 4.17
549 550 2.151202 TGCATCCGAACTTTTCTCACC 58.849 47.619 0.00 0.00 0.00 4.02
550 551 3.067106 TCTGCATCCGAACTTTTCTCAC 58.933 45.455 0.00 0.00 0.00 3.51
551 552 3.329386 CTCTGCATCCGAACTTTTCTCA 58.671 45.455 0.00 0.00 0.00 3.27
552 553 2.095053 GCTCTGCATCCGAACTTTTCTC 59.905 50.000 0.00 0.00 0.00 2.87
553 554 2.079925 GCTCTGCATCCGAACTTTTCT 58.920 47.619 0.00 0.00 0.00 2.52
554 555 2.079925 AGCTCTGCATCCGAACTTTTC 58.920 47.619 0.00 0.00 0.00 2.29
555 556 2.191128 AGCTCTGCATCCGAACTTTT 57.809 45.000 0.00 0.00 0.00 2.27
556 557 2.079925 GAAGCTCTGCATCCGAACTTT 58.920 47.619 0.00 0.00 0.00 2.66
557 558 1.677217 GGAAGCTCTGCATCCGAACTT 60.677 52.381 0.00 0.00 36.70 2.66
558 559 0.107945 GGAAGCTCTGCATCCGAACT 60.108 55.000 0.00 0.00 36.70 3.01
559 560 1.092345 GGGAAGCTCTGCATCCGAAC 61.092 60.000 7.57 0.00 45.97 3.95
560 561 1.221840 GGGAAGCTCTGCATCCGAA 59.778 57.895 7.57 0.00 45.97 4.30
561 562 2.903357 GGGAAGCTCTGCATCCGA 59.097 61.111 7.57 0.00 45.97 4.55
562 563 2.374830 ATCGGGAAGCTCTGCATCCG 62.375 60.000 7.57 9.06 45.97 4.18
563 564 0.681733 TATCGGGAAGCTCTGCATCC 59.318 55.000 5.37 5.37 44.53 3.51
564 565 1.606737 GGTATCGGGAAGCTCTGCATC 60.607 57.143 0.00 0.00 0.00 3.91
565 566 0.394565 GGTATCGGGAAGCTCTGCAT 59.605 55.000 0.00 0.00 0.00 3.96
566 567 0.975556 TGGTATCGGGAAGCTCTGCA 60.976 55.000 0.00 0.00 0.00 4.41
567 568 0.178068 TTGGTATCGGGAAGCTCTGC 59.822 55.000 0.00 0.00 0.00 4.26
568 569 2.691409 TTTGGTATCGGGAAGCTCTG 57.309 50.000 0.00 0.00 0.00 3.35
569 570 3.545703 CATTTTGGTATCGGGAAGCTCT 58.454 45.455 0.00 0.00 0.00 4.09
570 571 2.618709 CCATTTTGGTATCGGGAAGCTC 59.381 50.000 0.00 0.00 31.35 4.09
571 572 2.241176 TCCATTTTGGTATCGGGAAGCT 59.759 45.455 0.00 0.00 39.03 3.74
572 573 2.650322 TCCATTTTGGTATCGGGAAGC 58.350 47.619 0.00 0.00 39.03 3.86
573 574 6.952773 TTATTCCATTTTGGTATCGGGAAG 57.047 37.500 0.00 0.00 39.03 3.46
574 575 7.397761 AGTTTTATTCCATTTTGGTATCGGGAA 59.602 33.333 0.00 0.00 39.03 3.97
575 576 6.893005 AGTTTTATTCCATTTTGGTATCGGGA 59.107 34.615 0.00 0.00 39.03 5.14
576 577 7.107639 AGTTTTATTCCATTTTGGTATCGGG 57.892 36.000 0.00 0.00 39.03 5.14
577 578 7.010091 GCAAGTTTTATTCCATTTTGGTATCGG 59.990 37.037 0.00 0.00 39.03 4.18
578 579 7.253618 CGCAAGTTTTATTCCATTTTGGTATCG 60.254 37.037 0.00 0.00 39.03 2.92
579 580 7.010091 CCGCAAGTTTTATTCCATTTTGGTATC 59.990 37.037 0.00 0.00 39.03 2.24
580 581 6.816140 CCGCAAGTTTTATTCCATTTTGGTAT 59.184 34.615 0.00 0.00 39.03 2.73
581 582 6.159988 CCGCAAGTTTTATTCCATTTTGGTA 58.840 36.000 0.00 0.00 39.03 3.25
582 583 4.994217 CCGCAAGTTTTATTCCATTTTGGT 59.006 37.500 0.00 0.00 39.03 3.67
583 584 4.994217 ACCGCAAGTTTTATTCCATTTTGG 59.006 37.500 0.00 0.00 39.43 3.28
584 585 5.694006 TGACCGCAAGTTTTATTCCATTTTG 59.306 36.000 0.00 0.00 0.00 2.44
585 586 5.848406 TGACCGCAAGTTTTATTCCATTTT 58.152 33.333 0.00 0.00 0.00 1.82
586 587 5.461032 TGACCGCAAGTTTTATTCCATTT 57.539 34.783 0.00 0.00 0.00 2.32
587 588 5.659440 ATGACCGCAAGTTTTATTCCATT 57.341 34.783 0.00 0.00 0.00 3.16
588 589 5.184864 TCAATGACCGCAAGTTTTATTCCAT 59.815 36.000 0.00 0.00 0.00 3.41
589 590 4.520874 TCAATGACCGCAAGTTTTATTCCA 59.479 37.500 0.00 0.00 0.00 3.53
590 591 5.054390 TCAATGACCGCAAGTTTTATTCC 57.946 39.130 0.00 0.00 0.00 3.01
591 592 9.944663 TTATATCAATGACCGCAAGTTTTATTC 57.055 29.630 0.00 0.00 0.00 1.75
651 652 2.866726 GCCCACCAACCACGCAAAT 61.867 57.895 0.00 0.00 0.00 2.32
660 661 1.966762 CCAATGACAGCCCACCAAC 59.033 57.895 0.00 0.00 0.00 3.77
662 663 2.283101 GCCAATGACAGCCCACCA 60.283 61.111 0.00 0.00 0.00 4.17
692 693 4.020218 GGATTGGATGATGATACGGAAGGA 60.020 45.833 0.00 0.00 0.00 3.36
698 699 5.310720 TCTACGGATTGGATGATGATACG 57.689 43.478 0.00 0.00 33.45 3.06
715 716 3.972950 ACGATCAGAGGTCATTCTACG 57.027 47.619 0.00 0.00 0.00 3.51
733 734 2.229784 ACGGAGGGAGTACAACTTTACG 59.770 50.000 0.00 0.00 0.00 3.18
737 738 1.264295 GGACGGAGGGAGTACAACTT 58.736 55.000 0.00 0.00 0.00 2.66
753 754 2.749621 ACTTCTCATCAAAATGGCGGAC 59.250 45.455 0.00 0.00 33.42 4.79
755 756 5.505173 AATACTTCTCATCAAAATGGCGG 57.495 39.130 0.00 0.00 33.42 6.13
756 757 6.195244 CGAAAATACTTCTCATCAAAATGGCG 59.805 38.462 0.00 0.00 33.42 5.69
757 758 6.473455 CCGAAAATACTTCTCATCAAAATGGC 59.527 38.462 0.00 0.00 33.42 4.40
758 759 7.698130 GTCCGAAAATACTTCTCATCAAAATGG 59.302 37.037 0.00 0.00 33.42 3.16
759 760 7.426456 CGTCCGAAAATACTTCTCATCAAAATG 59.574 37.037 0.00 0.00 0.00 2.32
761 762 6.128391 CCGTCCGAAAATACTTCTCATCAAAA 60.128 38.462 0.00 0.00 0.00 2.44
762 763 5.350365 CCGTCCGAAAATACTTCTCATCAAA 59.650 40.000 0.00 0.00 0.00 2.69
764 765 4.158949 TCCGTCCGAAAATACTTCTCATCA 59.841 41.667 0.00 0.00 0.00 3.07
765 766 4.679662 TCCGTCCGAAAATACTTCTCATC 58.320 43.478 0.00 0.00 0.00 2.92
766 767 4.441634 CCTCCGTCCGAAAATACTTCTCAT 60.442 45.833 0.00 0.00 0.00 2.90
769 770 2.167900 CCCTCCGTCCGAAAATACTTCT 59.832 50.000 0.00 0.00 0.00 2.85
770 771 2.167075 TCCCTCCGTCCGAAAATACTTC 59.833 50.000 0.00 0.00 0.00 3.01
771 772 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
772 773 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
773 774 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
775 776 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
777 778 1.341285 TGATACTCCCTCCGTCCGAAA 60.341 52.381 0.00 0.00 0.00 3.46
778 779 0.256752 TGATACTCCCTCCGTCCGAA 59.743 55.000 0.00 0.00 0.00 4.30
779 780 0.477204 ATGATACTCCCTCCGTCCGA 59.523 55.000 0.00 0.00 0.00 4.55
780 781 0.882474 GATGATACTCCCTCCGTCCG 59.118 60.000 0.00 0.00 0.00 4.79
781 782 1.996798 TGATGATACTCCCTCCGTCC 58.003 55.000 0.00 0.00 0.00 4.79
782 783 4.379603 CGTATTGATGATACTCCCTCCGTC 60.380 50.000 0.00 0.00 38.78 4.79
785 848 5.654650 AGATCGTATTGATGATACTCCCTCC 59.345 44.000 0.00 0.00 38.78 4.30
813 876 5.046663 GTCATTTTTACCCCCAACATCATGT 60.047 40.000 0.00 0.00 0.00 3.21
822 885 4.461081 CGAGAAATGTCATTTTTACCCCCA 59.539 41.667 12.04 0.00 31.47 4.96
827 890 8.450964 TCCATTCTCGAGAAATGTCATTTTTAC 58.549 33.333 30.18 6.33 37.61 2.01
870 933 3.733709 GGCCATAATAGCAGCCAGT 57.266 52.632 0.00 0.00 45.07 4.00
898 961 2.488528 CCACATCAGCAGATAAGGGCAT 60.489 50.000 0.00 0.00 31.88 4.40
938 1002 2.236146 TGGACGTGCTATGAATTGTCCT 59.764 45.455 8.99 0.00 44.77 3.85
972 1036 0.603975 GGAGTGCCGGCCTGATAATC 60.604 60.000 26.77 13.61 0.00 1.75
996 1060 0.254178 AGATGGAGGCGAGCATTTGT 59.746 50.000 0.00 0.00 0.00 2.83
1072 1136 2.261671 GGACGACGACATGGCTGT 59.738 61.111 0.00 0.00 38.67 4.40
1108 1172 3.183776 GAGAGATCGGACGGTCGGC 62.184 68.421 10.52 0.00 0.00 5.54
1301 1365 0.452184 GAGGAAGATGACGTCAGCGA 59.548 55.000 26.40 1.49 42.00 4.93
1683 1747 2.532715 ACCATGCCCTCCACCAGT 60.533 61.111 0.00 0.00 0.00 4.00
1782 1916 1.227263 CATCCGCTTCCCGTACAGG 60.227 63.158 0.00 0.00 40.63 4.00
2050 2185 2.477375 GTGTTGCATTGCATCAACCAAG 59.523 45.455 20.78 0.00 39.47 3.61
2071 2206 2.094286 ACAGCAGGAGACAATTCTCTCG 60.094 50.000 4.85 0.00 46.80 4.04
2104 2242 3.072944 GAGCATGCAGAAGTCCCATATC 58.927 50.000 21.98 0.00 0.00 1.63
2213 2353 7.227156 ACTGATTTGCCAAATAGGACTATAGG 58.773 38.462 1.95 6.45 41.22 2.57
2214 2354 8.153550 AGACTGATTTGCCAAATAGGACTATAG 58.846 37.037 1.95 0.00 41.22 1.31
2215 2355 7.933577 CAGACTGATTTGCCAAATAGGACTATA 59.066 37.037 1.95 0.00 41.22 1.31
2216 2356 6.769822 CAGACTGATTTGCCAAATAGGACTAT 59.230 38.462 1.95 0.00 41.22 2.12
2219 2359 4.702131 ACAGACTGATTTGCCAAATAGGAC 59.298 41.667 10.08 0.30 41.22 3.85
2238 2378 5.644977 AGTTGATCGACAATCACTACAGA 57.355 39.130 15.59 0.00 44.14 3.41
2282 2422 2.770164 ACACAGGGTGAGCTACATTC 57.230 50.000 2.98 0.00 36.96 2.67
2287 2427 1.274167 CCGTTAACACAGGGTGAGCTA 59.726 52.381 6.39 0.00 36.96 3.32
2298 2438 4.590226 CGGCAAATATAACCCGTTAACAC 58.410 43.478 6.39 0.00 36.18 3.32
2320 2469 4.805192 TCTGAAGCAAGAAAAACACATTGC 59.195 37.500 0.65 0.65 46.50 3.56
2380 2530 6.183360 GGTGATCTAGTGTCTGACTTACGATT 60.183 42.308 9.51 0.00 35.96 3.34
2389 2539 5.422012 TGCAATTAGGTGATCTAGTGTCTGA 59.578 40.000 0.00 0.00 0.00 3.27
2482 2636 2.882876 CATCAAGCAGGCACAGGC 59.117 61.111 0.00 0.00 40.13 4.85
2565 2741 2.600729 CCAAGCTCTGCCCCTGTCT 61.601 63.158 0.00 0.00 0.00 3.41
2669 2847 2.041976 CCGGTACCTGCGATCTGAT 58.958 57.895 10.90 0.00 0.00 2.90
2723 2902 2.107366 CCAACAAGTGGTTTTGGTCCT 58.893 47.619 0.00 0.00 43.20 3.85
2761 2949 3.210012 AACCCCAACTCATGCGCCT 62.210 57.895 4.18 0.00 0.00 5.52
2779 2967 1.114722 ACCAACGTTCGTACCCCTCA 61.115 55.000 0.00 0.00 0.00 3.86
2842 3044 2.028748 CCCAATGGGCTGAACAGAAAAG 60.029 50.000 4.89 0.00 35.35 2.27
2959 3169 4.505808 CAATGGCATTTCATTGGCTGTAA 58.494 39.130 10.65 0.00 46.02 2.41
2960 3170 4.126208 CAATGGCATTTCATTGGCTGTA 57.874 40.909 10.65 0.00 46.02 2.74
3002 3212 7.333528 TGTATTCCACTTCAAAATAGGATGC 57.666 36.000 0.00 0.00 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.