Multiple sequence alignment - TraesCS3B01G309800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G309800 chr3B 100.000 1476 0 0 897 2372 498354746 498353271 0.000000e+00 2726
1 TraesCS3B01G309800 chr3B 90.224 982 56 11 897 1872 503033523 503034470 0.000000e+00 1245
2 TraesCS3B01G309800 chr3B 100.000 334 0 0 1 334 498355642 498355309 3.350000e-173 617
3 TraesCS3B01G309800 chr3B 90.335 269 25 1 34 302 794530653 794530920 3.750000e-93 351
4 TraesCS3B01G309800 chr7B 93.661 978 47 2 898 1872 518467212 518466247 0.000000e+00 1448
5 TraesCS3B01G309800 chr7B 90.253 554 27 5 1319 1869 201003778 201003249 0.000000e+00 699
6 TraesCS3B01G309800 chr7B 88.710 310 27 6 30 333 201004740 201004433 2.880000e-99 372
7 TraesCS3B01G309800 chr7B 89.145 304 24 3 30 333 518467897 518467603 1.040000e-98 370
8 TraesCS3B01G309800 chr5D 92.111 976 59 3 897 1869 434724353 434725313 0.000000e+00 1360
9 TraesCS3B01G309800 chr5D 91.161 973 47 9 911 1868 326743978 326744926 0.000000e+00 1284
10 TraesCS3B01G309800 chr5D 89.315 964 57 15 922 1869 14740321 14741254 0.000000e+00 1168
11 TraesCS3B01G309800 chr5B 91.241 959 45 12 911 1866 639140124 639141046 0.000000e+00 1269
12 TraesCS3B01G309800 chr5B 90.753 292 26 1 34 325 639139238 639139528 2.860000e-104 388
13 TraesCS3B01G309800 chr4B 91.291 953 44 7 914 1866 347391114 347392027 0.000000e+00 1264
14 TraesCS3B01G309800 chr4B 91.045 268 24 0 34 301 347390235 347390502 1.730000e-96 363
15 TraesCS3B01G309800 chr4B 88.621 290 26 5 34 323 102485112 102484830 1.750000e-91 346
16 TraesCS3B01G309800 chr2B 91.487 928 65 4 943 1866 212305525 212306442 0.000000e+00 1264
17 TraesCS3B01G309800 chr2B 88.843 977 60 9 897 1866 74213891 74214825 0.000000e+00 1155
18 TraesCS3B01G309800 chr6D 90.339 973 58 10 914 1868 18023218 18022264 0.000000e+00 1243
19 TraesCS3B01G309800 chr6B 90.356 954 72 7 918 1866 114516980 114516042 0.000000e+00 1234
20 TraesCS3B01G309800 chr1B 89.425 974 80 5 897 1864 363213476 363214432 0.000000e+00 1206
21 TraesCS3B01G309800 chr2D 89.474 950 58 14 945 1879 54890035 54889113 0.000000e+00 1162
22 TraesCS3B01G309800 chr3A 87.748 857 54 21 897 1744 711076946 711077760 0.000000e+00 953
23 TraesCS3B01G309800 chr3A 92.009 463 36 1 1405 1866 9516473 9516935 0.000000e+00 649
24 TraesCS3B01G309800 chr3A 86.544 327 21 5 2069 2372 505707803 505707477 2.920000e-89 339
25 TraesCS3B01G309800 chr3A 88.596 228 12 4 1865 2078 505715395 505715168 5.030000e-67 265
26 TraesCS3B01G309800 chrUn 92.261 491 23 5 1381 1868 141015219 141014741 0.000000e+00 682
27 TraesCS3B01G309800 chr3D 93.029 416 17 2 1454 1869 264130608 264130205 4.360000e-167 597
28 TraesCS3B01G309800 chr3D 87.619 315 35 4 14 325 601117384 601117071 1.730000e-96 363
29 TraesCS3B01G309800 chr3D 94.000 100 5 1 2028 2127 382744617 382744519 1.470000e-32 150
30 TraesCS3B01G309800 chr1D 91.259 286 24 1 34 318 13229700 13229415 2.860000e-104 388
31 TraesCS3B01G309800 chr4D 89.369 301 28 3 34 334 92671984 92671688 2.230000e-100 375


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G309800 chr3B 498353271 498355642 2371 True 1671.5 2726 100.0000 1 2372 2 chr3B.!!$R1 2371
1 TraesCS3B01G309800 chr3B 503033523 503034470 947 False 1245.0 1245 90.2240 897 1872 1 chr3B.!!$F1 975
2 TraesCS3B01G309800 chr7B 518466247 518467897 1650 True 909.0 1448 91.4030 30 1872 2 chr7B.!!$R2 1842
3 TraesCS3B01G309800 chr7B 201003249 201004740 1491 True 535.5 699 89.4815 30 1869 2 chr7B.!!$R1 1839
4 TraesCS3B01G309800 chr5D 434724353 434725313 960 False 1360.0 1360 92.1110 897 1869 1 chr5D.!!$F3 972
5 TraesCS3B01G309800 chr5D 326743978 326744926 948 False 1284.0 1284 91.1610 911 1868 1 chr5D.!!$F2 957
6 TraesCS3B01G309800 chr5D 14740321 14741254 933 False 1168.0 1168 89.3150 922 1869 1 chr5D.!!$F1 947
7 TraesCS3B01G309800 chr5B 639139238 639141046 1808 False 828.5 1269 90.9970 34 1866 2 chr5B.!!$F1 1832
8 TraesCS3B01G309800 chr4B 347390235 347392027 1792 False 813.5 1264 91.1680 34 1866 2 chr4B.!!$F1 1832
9 TraesCS3B01G309800 chr2B 212305525 212306442 917 False 1264.0 1264 91.4870 943 1866 1 chr2B.!!$F2 923
10 TraesCS3B01G309800 chr2B 74213891 74214825 934 False 1155.0 1155 88.8430 897 1866 1 chr2B.!!$F1 969
11 TraesCS3B01G309800 chr6D 18022264 18023218 954 True 1243.0 1243 90.3390 914 1868 1 chr6D.!!$R1 954
12 TraesCS3B01G309800 chr6B 114516042 114516980 938 True 1234.0 1234 90.3560 918 1866 1 chr6B.!!$R1 948
13 TraesCS3B01G309800 chr1B 363213476 363214432 956 False 1206.0 1206 89.4250 897 1864 1 chr1B.!!$F1 967
14 TraesCS3B01G309800 chr2D 54889113 54890035 922 True 1162.0 1162 89.4740 945 1879 1 chr2D.!!$R1 934
15 TraesCS3B01G309800 chr3A 711076946 711077760 814 False 953.0 953 87.7480 897 1744 1 chr3A.!!$F2 847

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
175 177 0.305313 GTAAAACGCAACACCTCGCA 59.695 50.0 0.0 0.0 0.0 5.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2097 2597 0.107945 CTCACCCTTAGACTGGCTGC 60.108 60.0 0.0 0.0 0.0 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.970662 ACGGTCATCATCAATTTTGAGG 57.029 40.909 0.00 0.00 41.08 3.86
40 41 8.635765 TTTGAGGAAAATACTAACAGCATCTT 57.364 30.769 0.00 0.00 0.00 2.40
104 105 3.003378 GTCTAAGGTCAAAAACGCAGCTT 59.997 43.478 0.00 0.00 0.00 3.74
105 106 2.959507 AAGGTCAAAAACGCAGCTTT 57.040 40.000 0.00 0.00 0.00 3.51
162 164 2.614057 CGGCCTCCTCATGATGTAAAAC 59.386 50.000 0.00 0.00 0.00 2.43
175 177 0.305313 GTAAAACGCAACACCTCGCA 59.695 50.000 0.00 0.00 0.00 5.10
252 254 0.678950 CCCAACCGCCACTTCATTTT 59.321 50.000 0.00 0.00 0.00 1.82
1116 1548 2.358125 CGTTGGTGGATCGGCACA 60.358 61.111 4.76 0.00 0.00 4.57
1124 1556 0.986019 TGGATCGGCACATACCCCTT 60.986 55.000 0.00 0.00 0.00 3.95
1321 1757 1.080093 GTCAATGCCGACGAGACCA 60.080 57.895 0.00 0.00 0.00 4.02
1331 1767 1.228490 ACGAGACCAACGAGGAGGT 60.228 57.895 5.70 0.00 41.22 3.85
1422 1885 0.459489 CGGAGCAGAAGAAGGAGGAG 59.541 60.000 0.00 0.00 0.00 3.69
1430 1893 2.042843 GAAGGAGGAGGAGGCCGA 60.043 66.667 0.00 0.00 0.00 5.54
1499 1995 4.268720 CTTCTCGGAGGAGGAGGG 57.731 66.667 5.32 0.00 41.54 4.30
1550 2047 1.681166 CCCGGAGAAGGACGAGTTCTA 60.681 57.143 0.73 0.00 34.30 2.10
1681 2180 9.436957 CTATGTTGAATGGACTAGTAGTTTGTT 57.563 33.333 3.85 0.00 0.00 2.83
1748 2248 6.267471 AGTTGCTCTTTTGGACCATCAATTTA 59.733 34.615 0.00 0.00 0.00 1.40
1756 2256 4.450976 TGGACCATCAATTTAGACCATCG 58.549 43.478 0.00 0.00 0.00 3.84
1816 2316 7.148323 GCACTTTTTGGTGGTTCAAATTTTACT 60.148 33.333 0.00 0.00 36.63 2.24
1879 2379 5.112129 AGATGCTCTAAACGGGGTAAAAT 57.888 39.130 0.00 0.00 0.00 1.82
1880 2380 4.881850 AGATGCTCTAAACGGGGTAAAATG 59.118 41.667 0.00 0.00 0.00 2.32
1881 2381 4.023726 TGCTCTAAACGGGGTAAAATGT 57.976 40.909 0.00 0.00 0.00 2.71
1882 2382 3.754323 TGCTCTAAACGGGGTAAAATGTG 59.246 43.478 0.00 0.00 0.00 3.21
1883 2383 3.754850 GCTCTAAACGGGGTAAAATGTGT 59.245 43.478 0.00 0.00 0.00 3.72
1884 2384 4.142752 GCTCTAAACGGGGTAAAATGTGTC 60.143 45.833 0.00 0.00 0.00 3.67
1885 2385 4.970711 TCTAAACGGGGTAAAATGTGTCA 58.029 39.130 0.00 0.00 0.00 3.58
1886 2386 3.994204 AAACGGGGTAAAATGTGTCAC 57.006 42.857 0.00 0.00 0.00 3.67
1887 2387 2.642154 ACGGGGTAAAATGTGTCACA 57.358 45.000 8.40 8.40 0.00 3.58
1888 2388 2.223745 ACGGGGTAAAATGTGTCACAC 58.776 47.619 8.08 0.00 34.56 3.82
1899 2399 2.779282 TGTCACACACACTTGCCTG 58.221 52.632 0.00 0.00 0.00 4.85
1900 2400 0.251634 TGTCACACACACTTGCCTGA 59.748 50.000 0.00 0.00 0.00 3.86
1901 2401 1.339535 TGTCACACACACTTGCCTGAA 60.340 47.619 0.00 0.00 0.00 3.02
1902 2402 1.064060 GTCACACACACTTGCCTGAAC 59.936 52.381 0.00 0.00 0.00 3.18
1903 2403 1.065491 TCACACACACTTGCCTGAACT 60.065 47.619 0.00 0.00 0.00 3.01
1904 2404 1.064505 CACACACACTTGCCTGAACTG 59.935 52.381 0.00 0.00 0.00 3.16
1905 2405 1.065491 ACACACACTTGCCTGAACTGA 60.065 47.619 0.00 0.00 0.00 3.41
1906 2406 1.600957 CACACACTTGCCTGAACTGAG 59.399 52.381 0.00 0.00 0.00 3.35
1907 2407 1.486310 ACACACTTGCCTGAACTGAGA 59.514 47.619 0.00 0.00 0.00 3.27
1908 2408 2.092968 ACACACTTGCCTGAACTGAGAA 60.093 45.455 0.00 0.00 0.00 2.87
1909 2409 3.144506 CACACTTGCCTGAACTGAGAAT 58.855 45.455 0.00 0.00 0.00 2.40
1910 2410 3.567164 CACACTTGCCTGAACTGAGAATT 59.433 43.478 0.00 0.00 0.00 2.17
1911 2411 4.037208 CACACTTGCCTGAACTGAGAATTT 59.963 41.667 0.00 0.00 0.00 1.82
1912 2412 4.646492 ACACTTGCCTGAACTGAGAATTTT 59.354 37.500 0.00 0.00 0.00 1.82
1913 2413 5.218139 CACTTGCCTGAACTGAGAATTTTC 58.782 41.667 0.00 0.00 0.00 2.29
1914 2414 4.889409 ACTTGCCTGAACTGAGAATTTTCA 59.111 37.500 0.00 0.00 0.00 2.69
1915 2415 4.836125 TGCCTGAACTGAGAATTTTCAC 57.164 40.909 0.00 0.00 0.00 3.18
1916 2416 4.206375 TGCCTGAACTGAGAATTTTCACA 58.794 39.130 0.00 0.00 0.00 3.58
1917 2417 4.036734 TGCCTGAACTGAGAATTTTCACAC 59.963 41.667 0.00 0.00 0.00 3.82
1918 2418 4.036734 GCCTGAACTGAGAATTTTCACACA 59.963 41.667 0.00 0.00 0.00 3.72
1919 2419 5.450412 GCCTGAACTGAGAATTTTCACACAA 60.450 40.000 0.00 0.00 0.00 3.33
1920 2420 6.563422 CCTGAACTGAGAATTTTCACACAAA 58.437 36.000 0.00 0.00 0.00 2.83
1921 2421 6.473455 CCTGAACTGAGAATTTTCACACAAAC 59.527 38.462 0.00 0.00 0.00 2.93
1922 2422 6.027131 TGAACTGAGAATTTTCACACAAACG 58.973 36.000 0.00 0.00 0.00 3.60
1923 2423 4.351192 ACTGAGAATTTTCACACAAACGC 58.649 39.130 0.00 0.00 0.00 4.84
1924 2424 3.358775 TGAGAATTTTCACACAAACGCG 58.641 40.909 3.53 3.53 0.00 6.01
1925 2425 3.064134 TGAGAATTTTCACACAAACGCGA 59.936 39.130 15.93 0.00 0.00 5.87
1926 2426 4.022464 AGAATTTTCACACAAACGCGAA 57.978 36.364 15.93 0.00 0.00 4.70
1927 2427 4.606961 AGAATTTTCACACAAACGCGAAT 58.393 34.783 15.93 0.00 0.00 3.34
1928 2428 5.040635 AGAATTTTCACACAAACGCGAATT 58.959 33.333 15.93 4.26 0.00 2.17
1929 2429 5.518487 AGAATTTTCACACAAACGCGAATTT 59.482 32.000 15.93 0.00 0.00 1.82
1930 2430 5.710613 ATTTTCACACAAACGCGAATTTT 57.289 30.435 15.93 0.00 0.00 1.82
1931 2431 4.746836 TTTCACACAAACGCGAATTTTC 57.253 36.364 15.93 0.00 0.00 2.29
1954 2454 9.667107 TTTCGATGTAAAATAGGAATTCACTCT 57.333 29.630 7.93 0.00 0.00 3.24
1955 2455 9.667107 TTCGATGTAAAATAGGAATTCACTCTT 57.333 29.630 7.93 0.00 0.00 2.85
1956 2456 9.098355 TCGATGTAAAATAGGAATTCACTCTTG 57.902 33.333 7.93 0.00 0.00 3.02
1957 2457 9.098355 CGATGTAAAATAGGAATTCACTCTTGA 57.902 33.333 7.93 0.00 0.00 3.02
1977 2477 9.455847 CTCTTGAATTAAATGGCTAAATAGTGC 57.544 33.333 0.00 0.00 0.00 4.40
1988 2488 5.629079 GCTAAATAGTGCCACAAGTTTCT 57.371 39.130 0.00 0.00 0.00 2.52
1989 2489 6.737254 GCTAAATAGTGCCACAAGTTTCTA 57.263 37.500 0.00 0.00 0.00 2.10
1990 2490 7.321745 GCTAAATAGTGCCACAAGTTTCTAT 57.678 36.000 0.00 0.00 0.00 1.98
1991 2491 8.433421 GCTAAATAGTGCCACAAGTTTCTATA 57.567 34.615 0.00 0.00 0.00 1.31
1992 2492 9.057089 GCTAAATAGTGCCACAAGTTTCTATAT 57.943 33.333 0.00 0.00 0.00 0.86
1995 2495 8.451908 AATAGTGCCACAAGTTTCTATATTCC 57.548 34.615 0.00 0.00 0.00 3.01
1996 2496 6.067217 AGTGCCACAAGTTTCTATATTCCT 57.933 37.500 0.00 0.00 0.00 3.36
1997 2497 7.195374 AGTGCCACAAGTTTCTATATTCCTA 57.805 36.000 0.00 0.00 0.00 2.94
1998 2498 7.806180 AGTGCCACAAGTTTCTATATTCCTAT 58.194 34.615 0.00 0.00 0.00 2.57
1999 2499 7.716998 AGTGCCACAAGTTTCTATATTCCTATG 59.283 37.037 0.00 0.00 0.00 2.23
2000 2500 6.486657 TGCCACAAGTTTCTATATTCCTATGC 59.513 38.462 0.00 0.00 0.00 3.14
2001 2501 6.712547 GCCACAAGTTTCTATATTCCTATGCT 59.287 38.462 0.00 0.00 0.00 3.79
2002 2502 7.095017 GCCACAAGTTTCTATATTCCTATGCTC 60.095 40.741 0.00 0.00 0.00 4.26
2003 2503 7.389053 CCACAAGTTTCTATATTCCTATGCTCC 59.611 40.741 0.00 0.00 0.00 4.70
2004 2504 7.933577 CACAAGTTTCTATATTCCTATGCTCCA 59.066 37.037 0.00 0.00 0.00 3.86
2005 2505 7.934120 ACAAGTTTCTATATTCCTATGCTCCAC 59.066 37.037 0.00 0.00 0.00 4.02
2006 2506 7.863901 AGTTTCTATATTCCTATGCTCCACT 57.136 36.000 0.00 0.00 0.00 4.00
2007 2507 8.268878 AGTTTCTATATTCCTATGCTCCACTT 57.731 34.615 0.00 0.00 0.00 3.16
2008 2508 8.153550 AGTTTCTATATTCCTATGCTCCACTTG 58.846 37.037 0.00 0.00 0.00 3.16
2009 2509 6.042638 TCTATATTCCTATGCTCCACTTGC 57.957 41.667 0.00 0.00 0.00 4.01
2010 2510 2.355010 ATTCCTATGCTCCACTTGCC 57.645 50.000 0.00 0.00 0.00 4.52
2011 2511 1.289160 TTCCTATGCTCCACTTGCCT 58.711 50.000 0.00 0.00 0.00 4.75
2012 2512 1.289160 TCCTATGCTCCACTTGCCTT 58.711 50.000 0.00 0.00 0.00 4.35
2013 2513 2.477245 TCCTATGCTCCACTTGCCTTA 58.523 47.619 0.00 0.00 0.00 2.69
2014 2514 3.048600 TCCTATGCTCCACTTGCCTTAT 58.951 45.455 0.00 0.00 0.00 1.73
2015 2515 3.459598 TCCTATGCTCCACTTGCCTTATT 59.540 43.478 0.00 0.00 0.00 1.40
2016 2516 4.079787 TCCTATGCTCCACTTGCCTTATTT 60.080 41.667 0.00 0.00 0.00 1.40
2017 2517 4.646492 CCTATGCTCCACTTGCCTTATTTT 59.354 41.667 0.00 0.00 0.00 1.82
2018 2518 5.827797 CCTATGCTCCACTTGCCTTATTTTA 59.172 40.000 0.00 0.00 0.00 1.52
2019 2519 6.321181 CCTATGCTCCACTTGCCTTATTTTAA 59.679 38.462 0.00 0.00 0.00 1.52
2020 2520 6.603940 ATGCTCCACTTGCCTTATTTTAAA 57.396 33.333 0.00 0.00 0.00 1.52
2021 2521 6.024552 TGCTCCACTTGCCTTATTTTAAAG 57.975 37.500 0.00 0.00 0.00 1.85
2022 2522 4.864806 GCTCCACTTGCCTTATTTTAAAGC 59.135 41.667 0.00 0.00 0.00 3.51
2023 2523 5.400066 TCCACTTGCCTTATTTTAAAGCC 57.600 39.130 0.00 0.00 0.00 4.35
2024 2524 5.083821 TCCACTTGCCTTATTTTAAAGCCT 58.916 37.500 0.00 0.00 0.00 4.58
2025 2525 5.542251 TCCACTTGCCTTATTTTAAAGCCTT 59.458 36.000 0.00 0.00 0.00 4.35
2026 2526 6.722129 TCCACTTGCCTTATTTTAAAGCCTTA 59.278 34.615 0.00 0.00 0.00 2.69
2027 2527 7.398904 TCCACTTGCCTTATTTTAAAGCCTTAT 59.601 33.333 0.00 0.00 0.00 1.73
2028 2528 7.706607 CCACTTGCCTTATTTTAAAGCCTTATC 59.293 37.037 0.00 0.00 0.00 1.75
2029 2529 7.706607 CACTTGCCTTATTTTAAAGCCTTATCC 59.293 37.037 0.00 0.00 0.00 2.59
2030 2530 7.398904 ACTTGCCTTATTTTAAAGCCTTATCCA 59.601 33.333 0.00 0.00 0.00 3.41
2031 2531 7.107639 TGCCTTATTTTAAAGCCTTATCCAC 57.892 36.000 0.00 0.00 0.00 4.02
2032 2532 6.895204 TGCCTTATTTTAAAGCCTTATCCACT 59.105 34.615 0.00 0.00 0.00 4.00
2033 2533 7.398904 TGCCTTATTTTAAAGCCTTATCCACTT 59.601 33.333 0.00 0.00 0.00 3.16
2034 2534 7.921214 GCCTTATTTTAAAGCCTTATCCACTTC 59.079 37.037 0.00 0.00 0.00 3.01
2035 2535 9.190317 CCTTATTTTAAAGCCTTATCCACTTCT 57.810 33.333 0.00 0.00 0.00 2.85
2038 2538 8.885693 ATTTTAAAGCCTTATCCACTTCTTCT 57.114 30.769 0.00 0.00 0.00 2.85
2039 2539 7.687941 TTTAAAGCCTTATCCACTTCTTCTG 57.312 36.000 0.00 0.00 0.00 3.02
2040 2540 4.917906 AAGCCTTATCCACTTCTTCTGT 57.082 40.909 0.00 0.00 0.00 3.41
2041 2541 4.213564 AGCCTTATCCACTTCTTCTGTG 57.786 45.455 0.00 0.00 35.39 3.66
2042 2542 3.840666 AGCCTTATCCACTTCTTCTGTGA 59.159 43.478 0.00 0.00 37.60 3.58
2043 2543 3.935828 GCCTTATCCACTTCTTCTGTGAC 59.064 47.826 0.00 0.00 37.60 3.67
2044 2544 4.177026 CCTTATCCACTTCTTCTGTGACG 58.823 47.826 0.00 0.00 37.60 4.35
2045 2545 4.082190 CCTTATCCACTTCTTCTGTGACGA 60.082 45.833 0.00 0.00 37.60 4.20
2046 2546 5.462530 TTATCCACTTCTTCTGTGACGAA 57.537 39.130 0.00 0.00 37.60 3.85
2047 2547 3.093717 TCCACTTCTTCTGTGACGAAC 57.906 47.619 0.00 0.00 37.60 3.95
2048 2548 2.429250 TCCACTTCTTCTGTGACGAACA 59.571 45.455 0.00 0.00 37.60 3.18
2049 2549 3.069586 TCCACTTCTTCTGTGACGAACAT 59.930 43.478 0.00 0.00 38.39 2.71
2050 2550 4.279922 TCCACTTCTTCTGTGACGAACATA 59.720 41.667 0.00 0.00 38.39 2.29
2051 2551 4.988540 CCACTTCTTCTGTGACGAACATAA 59.011 41.667 0.00 0.00 38.39 1.90
2052 2552 5.465390 CCACTTCTTCTGTGACGAACATAAA 59.535 40.000 0.00 0.00 38.39 1.40
2053 2553 6.018262 CCACTTCTTCTGTGACGAACATAAAA 60.018 38.462 0.00 0.00 38.39 1.52
2054 2554 7.406553 CACTTCTTCTGTGACGAACATAAAAA 58.593 34.615 0.00 0.00 38.39 1.94
2072 2572 1.332195 AAAACAGCAGAAGAAGGCCC 58.668 50.000 0.00 0.00 0.00 5.80
2073 2573 0.185901 AAACAGCAGAAGAAGGCCCA 59.814 50.000 0.00 0.00 0.00 5.36
2074 2574 0.407139 AACAGCAGAAGAAGGCCCAT 59.593 50.000 0.00 0.00 0.00 4.00
2075 2575 0.407139 ACAGCAGAAGAAGGCCCATT 59.593 50.000 0.00 0.00 0.00 3.16
2076 2576 1.203100 ACAGCAGAAGAAGGCCCATTT 60.203 47.619 0.00 0.00 0.00 2.32
2077 2577 2.041620 ACAGCAGAAGAAGGCCCATTTA 59.958 45.455 0.00 0.00 0.00 1.40
2078 2578 2.424956 CAGCAGAAGAAGGCCCATTTAC 59.575 50.000 0.00 0.00 0.00 2.01
2079 2579 1.751351 GCAGAAGAAGGCCCATTTACC 59.249 52.381 0.00 0.00 0.00 2.85
2080 2580 2.621668 GCAGAAGAAGGCCCATTTACCT 60.622 50.000 0.00 0.00 38.14 3.08
2088 2588 3.632333 AGGCCCATTTACCTTCTTAAGC 58.368 45.455 0.00 0.00 29.74 3.09
2089 2589 2.357952 GGCCCATTTACCTTCTTAAGCG 59.642 50.000 0.00 0.00 0.00 4.68
2090 2590 2.357952 GCCCATTTACCTTCTTAAGCGG 59.642 50.000 0.00 3.40 0.00 5.52
2091 2591 2.357952 CCCATTTACCTTCTTAAGCGGC 59.642 50.000 9.70 0.00 0.00 6.53
2092 2592 3.279434 CCATTTACCTTCTTAAGCGGCT 58.721 45.455 0.00 0.00 0.00 5.52
2093 2593 3.312697 CCATTTACCTTCTTAAGCGGCTC 59.687 47.826 1.45 0.00 0.00 4.70
2094 2594 3.688694 TTTACCTTCTTAAGCGGCTCA 57.311 42.857 1.45 0.00 0.00 4.26
2095 2595 2.961526 TACCTTCTTAAGCGGCTCAG 57.038 50.000 1.45 2.60 0.00 3.35
2096 2596 0.391793 ACCTTCTTAAGCGGCTCAGC 60.392 55.000 1.45 0.00 37.41 4.26
2097 2597 1.424493 CCTTCTTAAGCGGCTCAGCG 61.424 60.000 1.45 0.00 43.00 5.18
2098 2598 2.029904 CTTCTTAAGCGGCTCAGCGC 62.030 60.000 1.45 0.00 43.00 5.92
2099 2599 2.779951 TTCTTAAGCGGCTCAGCGCA 62.780 55.000 11.47 0.00 43.00 6.09
2100 2600 2.806856 CTTAAGCGGCTCAGCGCAG 61.807 63.158 11.47 0.00 43.00 5.18
2113 2613 2.982130 CGCAGCCAGTCTAAGGGT 59.018 61.111 0.00 0.00 37.34 4.34
2118 2618 1.859302 AGCCAGTCTAAGGGTGAGAG 58.141 55.000 0.00 0.00 35.13 3.20
2119 2619 1.077993 AGCCAGTCTAAGGGTGAGAGT 59.922 52.381 0.00 0.00 35.13 3.24
2120 2620 1.903183 GCCAGTCTAAGGGTGAGAGTT 59.097 52.381 0.00 0.00 0.00 3.01
2121 2621 3.097614 GCCAGTCTAAGGGTGAGAGTTA 58.902 50.000 0.00 0.00 0.00 2.24
2122 2622 3.119065 GCCAGTCTAAGGGTGAGAGTTAC 60.119 52.174 0.00 0.00 0.00 2.50
2123 2623 4.345854 CCAGTCTAAGGGTGAGAGTTACT 58.654 47.826 0.00 0.00 0.00 2.24
2124 2624 5.507637 CCAGTCTAAGGGTGAGAGTTACTA 58.492 45.833 0.00 0.00 0.00 1.82
2125 2625 5.950549 CCAGTCTAAGGGTGAGAGTTACTAA 59.049 44.000 0.00 0.00 0.00 2.24
2126 2626 6.095720 CCAGTCTAAGGGTGAGAGTTACTAAG 59.904 46.154 0.00 0.00 0.00 2.18
2127 2627 6.095720 CAGTCTAAGGGTGAGAGTTACTAAGG 59.904 46.154 0.00 0.00 0.00 2.69
2128 2628 5.951148 GTCTAAGGGTGAGAGTTACTAAGGT 59.049 44.000 0.00 0.00 0.00 3.50
2129 2629 6.436847 GTCTAAGGGTGAGAGTTACTAAGGTT 59.563 42.308 0.00 0.00 0.00 3.50
2130 2630 7.015064 TCTAAGGGTGAGAGTTACTAAGGTTT 58.985 38.462 0.00 0.00 0.00 3.27
2131 2631 5.741962 AGGGTGAGAGTTACTAAGGTTTC 57.258 43.478 0.00 0.00 0.00 2.78
2132 2632 5.152934 AGGGTGAGAGTTACTAAGGTTTCA 58.847 41.667 0.00 0.00 0.00 2.69
2133 2633 5.011840 AGGGTGAGAGTTACTAAGGTTTCAC 59.988 44.000 0.00 0.00 34.48 3.18
2134 2634 5.221581 GGGTGAGAGTTACTAAGGTTTCACA 60.222 44.000 4.04 0.00 36.36 3.58
2135 2635 6.285990 GGTGAGAGTTACTAAGGTTTCACAA 58.714 40.000 4.04 0.00 36.36 3.33
2136 2636 6.935208 GGTGAGAGTTACTAAGGTTTCACAAT 59.065 38.462 4.04 0.00 36.36 2.71
2137 2637 7.095187 GGTGAGAGTTACTAAGGTTTCACAATG 60.095 40.741 4.04 0.00 36.36 2.82
2138 2638 6.426937 TGAGAGTTACTAAGGTTTCACAATGC 59.573 38.462 0.00 0.00 0.00 3.56
2139 2639 5.408604 AGAGTTACTAAGGTTTCACAATGCG 59.591 40.000 0.00 0.00 0.00 4.73
2140 2640 4.454504 AGTTACTAAGGTTTCACAATGCGG 59.545 41.667 0.00 0.00 0.00 5.69
2141 2641 2.858745 ACTAAGGTTTCACAATGCGGT 58.141 42.857 0.00 0.00 0.00 5.68
2142 2642 3.219281 ACTAAGGTTTCACAATGCGGTT 58.781 40.909 0.00 0.00 0.00 4.44
2143 2643 2.793278 AAGGTTTCACAATGCGGTTC 57.207 45.000 0.00 0.00 0.00 3.62
2144 2644 0.591170 AGGTTTCACAATGCGGTTCG 59.409 50.000 0.00 0.00 0.00 3.95
2145 2645 0.386731 GGTTTCACAATGCGGTTCGG 60.387 55.000 0.00 0.00 0.00 4.30
2146 2646 1.001745 GTTTCACAATGCGGTTCGGC 61.002 55.000 0.00 0.00 0.00 5.54
2147 2647 2.450960 TTTCACAATGCGGTTCGGCG 62.451 55.000 0.00 0.00 35.06 6.46
2148 2648 3.418913 CACAATGCGGTTCGGCGA 61.419 61.111 4.99 4.99 35.06 5.54
2149 2649 3.419759 ACAATGCGGTTCGGCGAC 61.420 61.111 10.16 4.88 35.06 5.19
2150 2650 3.418913 CAATGCGGTTCGGCGACA 61.419 61.111 10.16 4.39 35.06 4.35
2151 2651 2.666862 AATGCGGTTCGGCGACAA 60.667 55.556 10.16 0.00 35.06 3.18
2152 2652 2.677003 AATGCGGTTCGGCGACAAG 61.677 57.895 10.16 4.53 35.06 3.16
2153 2653 3.876589 ATGCGGTTCGGCGACAAGT 62.877 57.895 10.16 0.00 35.06 3.16
2154 2654 4.072088 GCGGTTCGGCGACAAGTG 62.072 66.667 10.16 0.00 0.00 3.16
2155 2655 4.072088 CGGTTCGGCGACAAGTGC 62.072 66.667 10.16 0.00 0.00 4.40
2156 2656 2.665185 GGTTCGGCGACAAGTGCT 60.665 61.111 10.16 0.00 0.00 4.40
2157 2657 2.251642 GGTTCGGCGACAAGTGCTT 61.252 57.895 10.16 0.00 0.00 3.91
2158 2658 1.082756 GTTCGGCGACAAGTGCTTG 60.083 57.895 10.16 10.09 45.58 4.01
2159 2659 1.227409 TTCGGCGACAAGTGCTTGA 60.227 52.632 10.16 0.00 42.93 3.02
2160 2660 0.602638 TTCGGCGACAAGTGCTTGAT 60.603 50.000 10.16 3.35 42.93 2.57
2161 2661 1.014044 TCGGCGACAAGTGCTTGATC 61.014 55.000 17.62 10.43 42.93 2.92
2162 2662 1.016130 CGGCGACAAGTGCTTGATCT 61.016 55.000 17.62 0.00 42.93 2.75
2163 2663 0.445436 GGCGACAAGTGCTTGATCTG 59.555 55.000 17.62 6.15 42.93 2.90
2164 2664 1.151668 GCGACAAGTGCTTGATCTGT 58.848 50.000 17.62 0.00 42.93 3.41
2165 2665 1.136141 GCGACAAGTGCTTGATCTGTG 60.136 52.381 17.62 3.24 42.93 3.66
2166 2666 2.407090 CGACAAGTGCTTGATCTGTGA 58.593 47.619 17.62 0.00 42.93 3.58
2167 2667 2.998670 CGACAAGTGCTTGATCTGTGAT 59.001 45.455 17.62 0.00 42.93 3.06
2168 2668 4.176271 CGACAAGTGCTTGATCTGTGATA 58.824 43.478 17.62 0.00 42.93 2.15
2169 2669 4.267214 CGACAAGTGCTTGATCTGTGATAG 59.733 45.833 17.62 0.00 42.93 2.08
2170 2670 4.511527 ACAAGTGCTTGATCTGTGATAGG 58.488 43.478 17.62 0.00 42.93 2.57
2171 2671 3.834489 AGTGCTTGATCTGTGATAGGG 57.166 47.619 0.00 0.00 0.00 3.53
2172 2672 3.110705 AGTGCTTGATCTGTGATAGGGT 58.889 45.455 0.00 0.00 0.00 4.34
2173 2673 3.118482 AGTGCTTGATCTGTGATAGGGTG 60.118 47.826 0.00 0.00 0.00 4.61
2174 2674 2.840038 TGCTTGATCTGTGATAGGGTGT 59.160 45.455 0.00 0.00 0.00 4.16
2175 2675 3.264193 TGCTTGATCTGTGATAGGGTGTT 59.736 43.478 0.00 0.00 0.00 3.32
2176 2676 3.624861 GCTTGATCTGTGATAGGGTGTTG 59.375 47.826 0.00 0.00 0.00 3.33
2177 2677 3.266510 TGATCTGTGATAGGGTGTTGC 57.733 47.619 0.00 0.00 0.00 4.17
2178 2678 2.840038 TGATCTGTGATAGGGTGTTGCT 59.160 45.455 0.00 0.00 0.00 3.91
2179 2679 3.118629 TGATCTGTGATAGGGTGTTGCTC 60.119 47.826 0.00 0.00 0.00 4.26
2180 2680 1.204704 TCTGTGATAGGGTGTTGCTCG 59.795 52.381 0.00 0.00 0.00 5.03
2181 2681 1.204704 CTGTGATAGGGTGTTGCTCGA 59.795 52.381 0.00 0.00 0.00 4.04
2182 2682 1.204704 TGTGATAGGGTGTTGCTCGAG 59.795 52.381 8.45 8.45 0.00 4.04
2183 2683 0.824109 TGATAGGGTGTTGCTCGAGG 59.176 55.000 15.58 0.00 0.00 4.63
2184 2684 0.530870 GATAGGGTGTTGCTCGAGGC 60.531 60.000 15.58 7.24 42.22 4.70
2194 2694 1.427020 GCTCGAGGCAAATCTGTGC 59.573 57.895 15.58 0.00 44.14 4.57
2202 2702 2.342910 GCAAATCTGTGCCACTCAAG 57.657 50.000 0.00 0.00 38.66 3.02
2203 2703 1.068055 GCAAATCTGTGCCACTCAAGG 60.068 52.381 0.00 0.00 38.66 3.61
2204 2704 2.233271 CAAATCTGTGCCACTCAAGGT 58.767 47.619 0.00 0.00 0.00 3.50
2205 2705 2.624838 CAAATCTGTGCCACTCAAGGTT 59.375 45.455 0.00 0.00 0.00 3.50
2206 2706 2.664402 ATCTGTGCCACTCAAGGTTT 57.336 45.000 0.00 0.00 0.00 3.27
2207 2707 2.435372 TCTGTGCCACTCAAGGTTTT 57.565 45.000 0.00 0.00 0.00 2.43
2208 2708 3.569194 TCTGTGCCACTCAAGGTTTTA 57.431 42.857 0.00 0.00 0.00 1.52
2209 2709 3.476552 TCTGTGCCACTCAAGGTTTTAG 58.523 45.455 0.00 0.00 0.00 1.85
2210 2710 2.554032 CTGTGCCACTCAAGGTTTTAGG 59.446 50.000 0.00 0.00 0.00 2.69
2211 2711 1.886542 GTGCCACTCAAGGTTTTAGGG 59.113 52.381 0.00 0.00 0.00 3.53
2212 2712 1.497286 TGCCACTCAAGGTTTTAGGGT 59.503 47.619 0.00 0.00 0.00 4.34
2213 2713 1.886542 GCCACTCAAGGTTTTAGGGTG 59.113 52.381 0.00 0.00 0.00 4.61
2214 2714 2.488347 GCCACTCAAGGTTTTAGGGTGA 60.488 50.000 0.00 0.00 0.00 4.02
2215 2715 3.146847 CCACTCAAGGTTTTAGGGTGAC 58.853 50.000 0.00 0.00 0.00 3.67
2216 2716 3.434453 CCACTCAAGGTTTTAGGGTGACA 60.434 47.826 0.00 0.00 0.00 3.58
2217 2717 4.204012 CACTCAAGGTTTTAGGGTGACAA 58.796 43.478 0.00 0.00 0.00 3.18
2218 2718 4.036380 CACTCAAGGTTTTAGGGTGACAAC 59.964 45.833 0.00 0.00 0.00 3.32
2219 2719 3.558033 TCAAGGTTTTAGGGTGACAACC 58.442 45.455 0.00 0.00 46.81 3.77
2221 2721 3.503800 AGGTTTTAGGGTGACAACCTC 57.496 47.619 17.47 0.60 44.84 3.85
2222 2722 2.148768 GGTTTTAGGGTGACAACCTCG 58.851 52.381 17.47 0.00 46.70 4.63
2223 2723 2.148768 GTTTTAGGGTGACAACCTCGG 58.851 52.381 17.47 0.00 46.70 4.63
2224 2724 1.719529 TTTAGGGTGACAACCTCGGA 58.280 50.000 17.47 0.10 46.70 4.55
2225 2725 1.946984 TTAGGGTGACAACCTCGGAT 58.053 50.000 17.47 0.00 46.70 4.18
2226 2726 1.191535 TAGGGTGACAACCTCGGATG 58.808 55.000 17.47 0.00 46.70 3.51
2227 2727 0.836400 AGGGTGACAACCTCGGATGT 60.836 55.000 6.10 0.00 46.70 3.06
2228 2728 0.391263 GGGTGACAACCTCGGATGTC 60.391 60.000 16.67 16.67 46.70 3.06
2233 2733 1.398390 GACAACCTCGGATGTCAATGC 59.602 52.381 18.10 0.00 44.09 3.56
2234 2734 1.003580 ACAACCTCGGATGTCAATGCT 59.996 47.619 0.00 0.00 0.00 3.79
2235 2735 2.236146 ACAACCTCGGATGTCAATGCTA 59.764 45.455 0.00 0.00 0.00 3.49
2236 2736 2.868583 CAACCTCGGATGTCAATGCTAG 59.131 50.000 0.00 0.00 0.00 3.42
2237 2737 1.414181 ACCTCGGATGTCAATGCTAGG 59.586 52.381 0.00 0.00 41.34 3.02
2238 2738 1.270518 CCTCGGATGTCAATGCTAGGG 60.271 57.143 0.00 0.00 34.52 3.53
2239 2739 1.414181 CTCGGATGTCAATGCTAGGGT 59.586 52.381 0.00 0.00 0.00 4.34
2240 2740 1.837439 TCGGATGTCAATGCTAGGGTT 59.163 47.619 0.00 0.00 0.00 4.11
2241 2741 2.238646 TCGGATGTCAATGCTAGGGTTT 59.761 45.455 0.00 0.00 0.00 3.27
2242 2742 3.452990 TCGGATGTCAATGCTAGGGTTTA 59.547 43.478 0.00 0.00 0.00 2.01
2243 2743 3.809832 CGGATGTCAATGCTAGGGTTTAG 59.190 47.826 0.00 0.00 0.00 1.85
2244 2744 3.565902 GGATGTCAATGCTAGGGTTTAGC 59.434 47.826 0.00 0.00 40.76 3.09
2245 2745 4.455606 GATGTCAATGCTAGGGTTTAGCT 58.544 43.478 7.59 0.00 40.95 3.32
2246 2746 4.301072 TGTCAATGCTAGGGTTTAGCTT 57.699 40.909 0.00 0.00 40.95 3.74
2247 2747 4.662278 TGTCAATGCTAGGGTTTAGCTTT 58.338 39.130 0.00 4.96 40.95 3.51
2248 2748 5.076873 TGTCAATGCTAGGGTTTAGCTTTT 58.923 37.500 0.00 0.02 40.95 2.27
2249 2749 5.048083 TGTCAATGCTAGGGTTTAGCTTTTG 60.048 40.000 0.00 10.35 40.95 2.44
2250 2750 4.462483 TCAATGCTAGGGTTTAGCTTTTGG 59.538 41.667 15.58 5.11 40.95 3.28
2251 2751 2.802719 TGCTAGGGTTTAGCTTTTGGG 58.197 47.619 0.00 0.00 40.95 4.12
2252 2752 2.109304 TGCTAGGGTTTAGCTTTTGGGT 59.891 45.455 0.00 0.00 40.95 4.51
2253 2753 3.162666 GCTAGGGTTTAGCTTTTGGGTT 58.837 45.455 0.00 0.00 37.56 4.11
2254 2754 3.056821 GCTAGGGTTTAGCTTTTGGGTTG 60.057 47.826 0.00 0.00 37.56 3.77
2255 2755 3.322191 AGGGTTTAGCTTTTGGGTTGA 57.678 42.857 0.00 0.00 0.00 3.18
2256 2756 2.963101 AGGGTTTAGCTTTTGGGTTGAC 59.037 45.455 0.00 0.00 0.00 3.18
2257 2757 2.696187 GGGTTTAGCTTTTGGGTTGACA 59.304 45.455 0.00 0.00 0.00 3.58
2258 2758 3.133183 GGGTTTAGCTTTTGGGTTGACAA 59.867 43.478 0.00 0.00 0.00 3.18
2259 2759 4.202315 GGGTTTAGCTTTTGGGTTGACAAT 60.202 41.667 0.00 0.00 0.00 2.71
2260 2760 4.749598 GGTTTAGCTTTTGGGTTGACAATG 59.250 41.667 0.00 0.00 0.00 2.82
2261 2761 4.599047 TTAGCTTTTGGGTTGACAATGG 57.401 40.909 0.00 0.00 0.00 3.16
2262 2762 2.397597 AGCTTTTGGGTTGACAATGGT 58.602 42.857 0.00 0.00 0.00 3.55
2263 2763 2.102925 AGCTTTTGGGTTGACAATGGTG 59.897 45.455 0.00 0.00 0.00 4.17
2264 2764 2.102252 GCTTTTGGGTTGACAATGGTGA 59.898 45.455 0.00 0.00 0.00 4.02
2265 2765 3.716601 CTTTTGGGTTGACAATGGTGAC 58.283 45.455 0.00 0.00 0.00 3.67
2279 2779 2.989909 TGGTGACAGCCTCATATGTTG 58.010 47.619 1.90 0.84 35.01 3.33
2280 2780 2.305635 TGGTGACAGCCTCATATGTTGT 59.694 45.455 1.90 3.93 35.01 3.32
2281 2781 3.244875 TGGTGACAGCCTCATATGTTGTT 60.245 43.478 1.90 0.00 35.01 2.83
2282 2782 4.019771 TGGTGACAGCCTCATATGTTGTTA 60.020 41.667 1.90 0.00 35.01 2.41
2283 2783 4.332819 GGTGACAGCCTCATATGTTGTTAC 59.667 45.833 1.90 9.71 0.00 2.50
2284 2784 4.332819 GTGACAGCCTCATATGTTGTTACC 59.667 45.833 1.90 0.00 0.00 2.85
2285 2785 4.225042 TGACAGCCTCATATGTTGTTACCT 59.775 41.667 1.90 0.00 0.00 3.08
2286 2786 5.179452 ACAGCCTCATATGTTGTTACCTT 57.821 39.130 1.90 0.00 0.00 3.50
2287 2787 4.943705 ACAGCCTCATATGTTGTTACCTTG 59.056 41.667 1.90 0.00 0.00 3.61
2288 2788 4.943705 CAGCCTCATATGTTGTTACCTTGT 59.056 41.667 1.90 0.00 0.00 3.16
2289 2789 5.415701 CAGCCTCATATGTTGTTACCTTGTT 59.584 40.000 1.90 0.00 0.00 2.83
2290 2790 5.415701 AGCCTCATATGTTGTTACCTTGTTG 59.584 40.000 1.90 0.00 0.00 3.33
2291 2791 5.393027 GCCTCATATGTTGTTACCTTGTTGG 60.393 44.000 1.90 0.00 42.93 3.77
2292 2792 5.943416 CCTCATATGTTGTTACCTTGTTGGA 59.057 40.000 1.90 0.00 39.71 3.53
2293 2793 6.094048 CCTCATATGTTGTTACCTTGTTGGAG 59.906 42.308 1.90 0.00 39.71 3.86
2294 2794 6.774673 TCATATGTTGTTACCTTGTTGGAGA 58.225 36.000 1.90 0.00 39.71 3.71
2295 2795 6.653320 TCATATGTTGTTACCTTGTTGGAGAC 59.347 38.462 1.90 0.00 39.71 3.36
2296 2796 3.199677 TGTTGTTACCTTGTTGGAGACG 58.800 45.455 0.00 0.00 39.71 4.18
2297 2797 3.200483 GTTGTTACCTTGTTGGAGACGT 58.800 45.455 0.00 0.00 39.71 4.34
2298 2798 3.102052 TGTTACCTTGTTGGAGACGTC 57.898 47.619 7.70 7.70 39.71 4.34
2299 2799 2.431419 TGTTACCTTGTTGGAGACGTCA 59.569 45.455 19.50 0.00 39.71 4.35
2300 2800 3.118702 TGTTACCTTGTTGGAGACGTCAA 60.119 43.478 19.50 0.48 39.71 3.18
2301 2801 1.949465 ACCTTGTTGGAGACGTCAAC 58.051 50.000 19.50 14.46 43.29 3.18
2302 2802 1.485066 ACCTTGTTGGAGACGTCAACT 59.515 47.619 19.50 0.00 43.36 3.16
2303 2803 2.696707 ACCTTGTTGGAGACGTCAACTA 59.303 45.455 19.50 10.07 43.36 2.24
2304 2804 3.057734 CCTTGTTGGAGACGTCAACTAC 58.942 50.000 19.50 16.08 43.36 2.73
2305 2805 3.243771 CCTTGTTGGAGACGTCAACTACT 60.244 47.826 19.50 0.00 43.36 2.57
2306 2806 4.369182 CTTGTTGGAGACGTCAACTACTT 58.631 43.478 19.50 0.00 43.36 2.24
2307 2807 3.713288 TGTTGGAGACGTCAACTACTTG 58.287 45.455 19.50 0.00 43.36 3.16
2308 2808 2.433868 TGGAGACGTCAACTACTTGC 57.566 50.000 19.50 0.39 0.00 4.01
2309 2809 1.961394 TGGAGACGTCAACTACTTGCT 59.039 47.619 19.50 0.00 0.00 3.91
2310 2810 2.364324 TGGAGACGTCAACTACTTGCTT 59.636 45.455 19.50 0.00 0.00 3.91
2311 2811 2.731976 GGAGACGTCAACTACTTGCTTG 59.268 50.000 19.50 0.00 0.00 4.01
2312 2812 2.731976 GAGACGTCAACTACTTGCTTGG 59.268 50.000 19.50 0.00 0.00 3.61
2313 2813 2.364324 AGACGTCAACTACTTGCTTGGA 59.636 45.455 19.50 0.00 0.00 3.53
2314 2814 2.731976 GACGTCAACTACTTGCTTGGAG 59.268 50.000 11.55 0.00 0.00 3.86
2315 2815 2.102588 ACGTCAACTACTTGCTTGGAGT 59.897 45.455 0.00 0.00 0.00 3.85
2316 2816 2.731976 CGTCAACTACTTGCTTGGAGTC 59.268 50.000 0.00 0.00 0.00 3.36
2317 2817 3.728845 GTCAACTACTTGCTTGGAGTCA 58.271 45.455 0.00 0.00 0.00 3.41
2318 2818 4.127171 GTCAACTACTTGCTTGGAGTCAA 58.873 43.478 0.00 0.00 0.00 3.18
2319 2819 4.574828 GTCAACTACTTGCTTGGAGTCAAA 59.425 41.667 0.00 0.00 31.77 2.69
2320 2820 4.816385 TCAACTACTTGCTTGGAGTCAAAG 59.184 41.667 2.55 2.55 31.77 2.77
2321 2821 4.423625 ACTACTTGCTTGGAGTCAAAGT 57.576 40.909 9.07 4.79 31.77 2.66
2322 2822 4.781934 ACTACTTGCTTGGAGTCAAAGTT 58.218 39.130 9.07 0.00 31.77 2.66
2323 2823 4.576463 ACTACTTGCTTGGAGTCAAAGTTG 59.424 41.667 9.07 5.74 31.77 3.16
2324 2824 2.689983 ACTTGCTTGGAGTCAAAGTTGG 59.310 45.455 9.07 2.36 31.77 3.77
2325 2825 2.435372 TGCTTGGAGTCAAAGTTGGT 57.565 45.000 9.07 0.00 31.77 3.67
2326 2826 2.023673 TGCTTGGAGTCAAAGTTGGTG 58.976 47.619 9.07 0.00 31.77 4.17
2327 2827 2.297701 GCTTGGAGTCAAAGTTGGTGA 58.702 47.619 9.07 0.00 31.77 4.02
2328 2828 2.687935 GCTTGGAGTCAAAGTTGGTGAA 59.312 45.455 9.07 0.00 31.77 3.18
2329 2829 3.243201 GCTTGGAGTCAAAGTTGGTGAAG 60.243 47.826 9.07 0.00 31.77 3.02
2330 2830 3.924114 TGGAGTCAAAGTTGGTGAAGA 57.076 42.857 0.00 0.00 0.00 2.87
2331 2831 4.229304 TGGAGTCAAAGTTGGTGAAGAA 57.771 40.909 0.00 0.00 0.00 2.52
2332 2832 4.594970 TGGAGTCAAAGTTGGTGAAGAAA 58.405 39.130 0.00 0.00 0.00 2.52
2333 2833 4.640201 TGGAGTCAAAGTTGGTGAAGAAAG 59.360 41.667 0.00 0.00 0.00 2.62
2334 2834 4.036852 GGAGTCAAAGTTGGTGAAGAAAGG 59.963 45.833 0.00 0.00 0.00 3.11
2335 2835 3.954258 AGTCAAAGTTGGTGAAGAAAGGG 59.046 43.478 0.00 0.00 0.00 3.95
2336 2836 3.699538 GTCAAAGTTGGTGAAGAAAGGGT 59.300 43.478 0.00 0.00 0.00 4.34
2337 2837 3.699038 TCAAAGTTGGTGAAGAAAGGGTG 59.301 43.478 0.00 0.00 0.00 4.61
2338 2838 3.662759 AAGTTGGTGAAGAAAGGGTGA 57.337 42.857 0.00 0.00 0.00 4.02
2339 2839 3.884037 AGTTGGTGAAGAAAGGGTGAT 57.116 42.857 0.00 0.00 0.00 3.06
2340 2840 4.184649 AGTTGGTGAAGAAAGGGTGATT 57.815 40.909 0.00 0.00 0.00 2.57
2341 2841 5.319043 AGTTGGTGAAGAAAGGGTGATTA 57.681 39.130 0.00 0.00 0.00 1.75
2342 2842 5.316987 AGTTGGTGAAGAAAGGGTGATTAG 58.683 41.667 0.00 0.00 0.00 1.73
2343 2843 4.301072 TGGTGAAGAAAGGGTGATTAGG 57.699 45.455 0.00 0.00 0.00 2.69
2344 2844 3.913799 TGGTGAAGAAAGGGTGATTAGGA 59.086 43.478 0.00 0.00 0.00 2.94
2345 2845 4.540099 TGGTGAAGAAAGGGTGATTAGGAT 59.460 41.667 0.00 0.00 0.00 3.24
2346 2846 4.884164 GGTGAAGAAAGGGTGATTAGGATG 59.116 45.833 0.00 0.00 0.00 3.51
2347 2847 4.884164 GTGAAGAAAGGGTGATTAGGATGG 59.116 45.833 0.00 0.00 0.00 3.51
2348 2848 3.584733 AGAAAGGGTGATTAGGATGGC 57.415 47.619 0.00 0.00 0.00 4.40
2349 2849 3.126453 AGAAAGGGTGATTAGGATGGCT 58.874 45.455 0.00 0.00 0.00 4.75
2350 2850 3.529319 AGAAAGGGTGATTAGGATGGCTT 59.471 43.478 0.00 0.00 0.00 4.35
2351 2851 4.017130 AGAAAGGGTGATTAGGATGGCTTT 60.017 41.667 0.00 0.00 0.00 3.51
2352 2852 3.303351 AGGGTGATTAGGATGGCTTTG 57.697 47.619 0.00 0.00 0.00 2.77
2353 2853 1.683385 GGGTGATTAGGATGGCTTTGC 59.317 52.381 0.00 0.00 0.00 3.68
2354 2854 1.334869 GGTGATTAGGATGGCTTTGCG 59.665 52.381 0.00 0.00 0.00 4.85
2355 2855 2.288666 GTGATTAGGATGGCTTTGCGA 58.711 47.619 0.00 0.00 0.00 5.10
2356 2856 2.682856 GTGATTAGGATGGCTTTGCGAA 59.317 45.455 0.00 0.00 0.00 4.70
2357 2857 2.682856 TGATTAGGATGGCTTTGCGAAC 59.317 45.455 0.00 0.00 0.00 3.95
2358 2858 1.083489 TTAGGATGGCTTTGCGAACG 58.917 50.000 0.00 0.00 0.00 3.95
2359 2859 0.248012 TAGGATGGCTTTGCGAACGA 59.752 50.000 0.00 0.00 0.00 3.85
2360 2860 1.134694 GGATGGCTTTGCGAACGAC 59.865 57.895 0.00 0.00 0.00 4.34
2361 2861 1.573829 GGATGGCTTTGCGAACGACA 61.574 55.000 0.00 0.00 0.00 4.35
2362 2862 0.447801 GATGGCTTTGCGAACGACAT 59.552 50.000 4.65 4.65 0.00 3.06
2363 2863 0.447801 ATGGCTTTGCGAACGACATC 59.552 50.000 0.00 0.00 0.00 3.06
2364 2864 0.882484 TGGCTTTGCGAACGACATCA 60.882 50.000 0.00 0.00 0.00 3.07
2365 2865 0.237235 GGCTTTGCGAACGACATCAA 59.763 50.000 0.00 0.00 0.00 2.57
2366 2866 1.318251 GCTTTGCGAACGACATCAAC 58.682 50.000 0.00 0.00 0.00 3.18
2367 2867 1.069906 GCTTTGCGAACGACATCAACT 60.070 47.619 0.00 0.00 0.00 3.16
2368 2868 2.563976 CTTTGCGAACGACATCAACTG 58.436 47.619 0.00 0.00 0.00 3.16
2369 2869 0.865111 TTGCGAACGACATCAACTGG 59.135 50.000 0.00 0.00 0.00 4.00
2370 2870 0.249699 TGCGAACGACATCAACTGGT 60.250 50.000 0.00 0.00 0.00 4.00
2371 2871 1.000052 TGCGAACGACATCAACTGGTA 60.000 47.619 0.00 0.00 0.00 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.588899 TCCTCAAAATTGATGATGACCGT 58.411 39.130 0.00 0.00 36.46 4.83
9 10 9.860898 GCTGTTAGTATTTTCCTCAAAATTGAT 57.139 29.630 0.00 0.00 41.56 2.57
10 11 8.855110 TGCTGTTAGTATTTTCCTCAAAATTGA 58.145 29.630 0.00 0.00 41.56 2.57
11 12 9.643693 ATGCTGTTAGTATTTTCCTCAAAATTG 57.356 29.630 0.00 0.00 41.56 2.32
12 13 9.860898 GATGCTGTTAGTATTTTCCTCAAAATT 57.139 29.630 0.00 0.00 41.56 1.82
13 14 9.247861 AGATGCTGTTAGTATTTTCCTCAAAAT 57.752 29.630 0.00 0.00 43.39 1.82
14 15 8.635765 AGATGCTGTTAGTATTTTCCTCAAAA 57.364 30.769 0.00 0.00 35.92 2.44
15 16 8.635765 AAGATGCTGTTAGTATTTTCCTCAAA 57.364 30.769 0.00 0.00 0.00 2.69
16 17 7.882791 TGAAGATGCTGTTAGTATTTTCCTCAA 59.117 33.333 7.39 0.00 32.89 3.02
17 18 7.394016 TGAAGATGCTGTTAGTATTTTCCTCA 58.606 34.615 7.39 0.00 32.89 3.86
18 19 7.849804 TGAAGATGCTGTTAGTATTTTCCTC 57.150 36.000 7.39 0.00 32.89 3.71
19 20 8.814038 ATTGAAGATGCTGTTAGTATTTTCCT 57.186 30.769 7.39 0.00 32.89 3.36
40 41 8.877864 ACTTTTACATTTGGACCATCTATTGA 57.122 30.769 0.00 0.00 0.00 2.57
77 78 4.819630 TGCGTTTTTGACCTTAGACAATCT 59.180 37.500 0.00 0.00 0.00 2.40
81 82 2.289547 GCTGCGTTTTTGACCTTAGACA 59.710 45.455 0.00 0.00 0.00 3.41
90 91 4.030753 CGTTTGTTAAAGCTGCGTTTTTGA 59.969 37.500 6.07 0.00 0.00 2.69
162 164 4.374702 GCACTGCGAGGTGTTGCG 62.375 66.667 9.32 0.00 39.21 4.85
175 177 6.775939 CATCTCGTGATGTATATTTGCACT 57.224 37.500 17.30 0.00 43.68 4.40
1116 1548 2.364579 TCGTGGGCGAAGGGGTAT 60.365 61.111 0.00 0.00 44.92 2.73
1237 1670 0.252761 TTCATCTTGATGCCCTGCGA 59.747 50.000 5.78 0.00 0.00 5.10
1321 1757 1.949847 CTCGCCATCACCTCCTCGTT 61.950 60.000 0.00 0.00 0.00 3.85
1331 1767 1.243342 CCAAGCAAACCTCGCCATCA 61.243 55.000 0.00 0.00 0.00 3.07
1356 1792 0.381089 CAGCTTAGACGTACTCCGGG 59.619 60.000 0.00 0.00 42.24 5.73
1422 1885 3.607661 GTCGAGGGATCGGCCTCC 61.608 72.222 11.23 0.75 36.66 4.30
1430 1893 1.833049 GGGATCACCGTCGAGGGAT 60.833 63.158 29.83 14.24 46.96 3.85
1499 1995 2.015726 TCCTCCTCCTCCTCCTCCC 61.016 68.421 0.00 0.00 0.00 4.30
1869 2369 2.222886 TGTGTGACACATTTTACCCCG 58.777 47.619 15.39 0.00 39.62 5.73
1881 2381 0.251634 TCAGGCAAGTGTGTGTGACA 59.748 50.000 0.00 0.00 0.00 3.58
1882 2382 1.064060 GTTCAGGCAAGTGTGTGTGAC 59.936 52.381 0.00 0.00 0.00 3.67
1883 2383 1.065491 AGTTCAGGCAAGTGTGTGTGA 60.065 47.619 0.00 0.00 0.00 3.58
1884 2384 1.064505 CAGTTCAGGCAAGTGTGTGTG 59.935 52.381 0.00 0.00 31.46 3.82
1885 2385 1.065491 TCAGTTCAGGCAAGTGTGTGT 60.065 47.619 0.00 0.00 36.84 3.72
1886 2386 1.600957 CTCAGTTCAGGCAAGTGTGTG 59.399 52.381 0.00 0.00 36.84 3.82
1887 2387 1.486310 TCTCAGTTCAGGCAAGTGTGT 59.514 47.619 0.00 0.00 36.84 3.72
1888 2388 2.245159 TCTCAGTTCAGGCAAGTGTG 57.755 50.000 0.00 0.00 36.84 3.82
1889 2389 3.498774 ATTCTCAGTTCAGGCAAGTGT 57.501 42.857 0.00 0.00 36.84 3.55
1890 2390 4.843220 AAATTCTCAGTTCAGGCAAGTG 57.157 40.909 0.00 0.00 36.83 3.16
1891 2391 4.889409 TGAAAATTCTCAGTTCAGGCAAGT 59.111 37.500 0.00 0.00 0.00 3.16
1892 2392 5.218139 GTGAAAATTCTCAGTTCAGGCAAG 58.782 41.667 0.00 0.00 32.15 4.01
1893 2393 4.644234 TGTGAAAATTCTCAGTTCAGGCAA 59.356 37.500 0.00 0.00 32.15 4.52
1894 2394 4.036734 GTGTGAAAATTCTCAGTTCAGGCA 59.963 41.667 0.00 0.00 32.15 4.75
1895 2395 4.036734 TGTGTGAAAATTCTCAGTTCAGGC 59.963 41.667 0.00 0.00 32.15 4.85
1896 2396 5.756195 TGTGTGAAAATTCTCAGTTCAGG 57.244 39.130 0.00 0.00 32.15 3.86
1897 2397 6.195244 CGTTTGTGTGAAAATTCTCAGTTCAG 59.805 38.462 0.00 0.00 32.15 3.02
1898 2398 6.027131 CGTTTGTGTGAAAATTCTCAGTTCA 58.973 36.000 0.00 0.00 32.09 3.18
1899 2399 5.052370 GCGTTTGTGTGAAAATTCTCAGTTC 60.052 40.000 0.00 0.00 32.09 3.01
1900 2400 4.798387 GCGTTTGTGTGAAAATTCTCAGTT 59.202 37.500 0.00 0.00 32.09 3.16
1901 2401 4.351192 GCGTTTGTGTGAAAATTCTCAGT 58.649 39.130 0.00 0.00 32.09 3.41
1902 2402 3.418619 CGCGTTTGTGTGAAAATTCTCAG 59.581 43.478 0.00 0.00 32.09 3.35
1903 2403 3.064134 TCGCGTTTGTGTGAAAATTCTCA 59.936 39.130 5.77 0.00 0.00 3.27
1904 2404 3.613563 TCGCGTTTGTGTGAAAATTCTC 58.386 40.909 5.77 0.00 0.00 2.87
1905 2405 3.684103 TCGCGTTTGTGTGAAAATTCT 57.316 38.095 5.77 0.00 0.00 2.40
1906 2406 4.947077 ATTCGCGTTTGTGTGAAAATTC 57.053 36.364 5.77 0.00 41.27 2.17
1907 2407 5.710613 AAATTCGCGTTTGTGTGAAAATT 57.289 30.435 5.77 0.00 41.27 1.82
1908 2408 5.553581 CGAAAATTCGCGTTTGTGTGAAAAT 60.554 36.000 5.77 0.00 44.26 1.82
1909 2409 4.259056 CGAAAATTCGCGTTTGTGTGAAAA 60.259 37.500 5.77 0.00 44.26 2.29
1910 2410 3.238570 CGAAAATTCGCGTTTGTGTGAAA 59.761 39.130 5.77 0.00 44.26 2.69
1911 2411 2.778928 CGAAAATTCGCGTTTGTGTGAA 59.221 40.909 5.77 0.00 44.26 3.18
1912 2412 2.367772 CGAAAATTCGCGTTTGTGTGA 58.632 42.857 5.77 0.00 44.26 3.58
1913 2413 2.791450 CGAAAATTCGCGTTTGTGTG 57.209 45.000 5.77 0.00 44.26 3.82
1928 2428 9.667107 AGAGTGAATTCCTATTTTACATCGAAA 57.333 29.630 2.27 0.00 0.00 3.46
1929 2429 9.667107 AAGAGTGAATTCCTATTTTACATCGAA 57.333 29.630 2.27 0.00 0.00 3.71
1930 2430 9.098355 CAAGAGTGAATTCCTATTTTACATCGA 57.902 33.333 2.27 0.00 0.00 3.59
1931 2431 9.098355 TCAAGAGTGAATTCCTATTTTACATCG 57.902 33.333 2.27 0.00 0.00 3.84
1951 2451 9.455847 GCACTATTTAGCCATTTAATTCAAGAG 57.544 33.333 0.00 0.00 0.00 2.85
1966 2466 5.629079 AGAAACTTGTGGCACTATTTAGC 57.371 39.130 19.83 7.78 0.00 3.09
1969 2469 8.903820 GGAATATAGAAACTTGTGGCACTATTT 58.096 33.333 19.83 15.31 0.00 1.40
1970 2470 8.275040 AGGAATATAGAAACTTGTGGCACTATT 58.725 33.333 19.83 10.49 0.00 1.73
1971 2471 7.806180 AGGAATATAGAAACTTGTGGCACTAT 58.194 34.615 19.83 8.67 0.00 2.12
1972 2472 7.195374 AGGAATATAGAAACTTGTGGCACTA 57.805 36.000 19.83 10.67 0.00 2.74
1973 2473 6.067217 AGGAATATAGAAACTTGTGGCACT 57.933 37.500 19.83 0.00 0.00 4.40
1974 2474 7.520614 GCATAGGAATATAGAAACTTGTGGCAC 60.521 40.741 11.55 11.55 0.00 5.01
1975 2475 6.486657 GCATAGGAATATAGAAACTTGTGGCA 59.513 38.462 0.00 0.00 0.00 4.92
1976 2476 6.712547 AGCATAGGAATATAGAAACTTGTGGC 59.287 38.462 0.00 0.00 0.00 5.01
1977 2477 7.389053 GGAGCATAGGAATATAGAAACTTGTGG 59.611 40.741 0.00 0.00 0.00 4.17
1978 2478 7.933577 TGGAGCATAGGAATATAGAAACTTGTG 59.066 37.037 0.00 0.00 0.00 3.33
1979 2479 7.934120 GTGGAGCATAGGAATATAGAAACTTGT 59.066 37.037 0.00 0.00 0.00 3.16
1980 2480 8.153550 AGTGGAGCATAGGAATATAGAAACTTG 58.846 37.037 0.00 0.00 0.00 3.16
1981 2481 8.268878 AGTGGAGCATAGGAATATAGAAACTT 57.731 34.615 0.00 0.00 0.00 2.66
1982 2482 7.863901 AGTGGAGCATAGGAATATAGAAACT 57.136 36.000 0.00 0.00 0.00 2.66
1983 2483 7.095017 GCAAGTGGAGCATAGGAATATAGAAAC 60.095 40.741 0.00 0.00 0.00 2.78
1984 2484 6.936900 GCAAGTGGAGCATAGGAATATAGAAA 59.063 38.462 0.00 0.00 0.00 2.52
1985 2485 6.467677 GCAAGTGGAGCATAGGAATATAGAA 58.532 40.000 0.00 0.00 0.00 2.10
1986 2486 5.046304 GGCAAGTGGAGCATAGGAATATAGA 60.046 44.000 0.00 0.00 0.00 1.98
1987 2487 5.046014 AGGCAAGTGGAGCATAGGAATATAG 60.046 44.000 0.00 0.00 0.00 1.31
1988 2488 4.846367 AGGCAAGTGGAGCATAGGAATATA 59.154 41.667 0.00 0.00 0.00 0.86
1989 2489 3.654806 AGGCAAGTGGAGCATAGGAATAT 59.345 43.478 0.00 0.00 0.00 1.28
1990 2490 3.048600 AGGCAAGTGGAGCATAGGAATA 58.951 45.455 0.00 0.00 0.00 1.75
1991 2491 1.849039 AGGCAAGTGGAGCATAGGAAT 59.151 47.619 0.00 0.00 0.00 3.01
1992 2492 1.289160 AGGCAAGTGGAGCATAGGAA 58.711 50.000 0.00 0.00 0.00 3.36
1993 2493 1.289160 AAGGCAAGTGGAGCATAGGA 58.711 50.000 0.00 0.00 0.00 2.94
1994 2494 3.498774 ATAAGGCAAGTGGAGCATAGG 57.501 47.619 0.00 0.00 0.00 2.57
1995 2495 5.841957 AAAATAAGGCAAGTGGAGCATAG 57.158 39.130 0.00 0.00 0.00 2.23
1996 2496 7.630513 GCTTTAAAATAAGGCAAGTGGAGCATA 60.631 37.037 0.03 0.00 0.00 3.14
1997 2497 6.603940 TTTAAAATAAGGCAAGTGGAGCAT 57.396 33.333 0.00 0.00 0.00 3.79
1998 2498 5.566627 GCTTTAAAATAAGGCAAGTGGAGCA 60.567 40.000 0.03 0.00 0.00 4.26
1999 2499 4.864806 GCTTTAAAATAAGGCAAGTGGAGC 59.135 41.667 0.03 0.00 0.00 4.70
2000 2500 5.410924 GGCTTTAAAATAAGGCAAGTGGAG 58.589 41.667 6.56 0.00 46.61 3.86
2001 2501 5.400066 GGCTTTAAAATAAGGCAAGTGGA 57.600 39.130 6.56 0.00 46.61 4.02
2009 2509 9.190317 AGAAGTGGATAAGGCTTTAAAATAAGG 57.810 33.333 4.45 0.00 0.00 2.69
2012 2512 9.975218 AGAAGAAGTGGATAAGGCTTTAAAATA 57.025 29.630 4.45 0.00 0.00 1.40
2013 2513 8.743714 CAGAAGAAGTGGATAAGGCTTTAAAAT 58.256 33.333 4.45 0.00 0.00 1.82
2014 2514 7.724061 ACAGAAGAAGTGGATAAGGCTTTAAAA 59.276 33.333 4.45 0.00 0.00 1.52
2015 2515 7.174946 CACAGAAGAAGTGGATAAGGCTTTAAA 59.825 37.037 4.45 0.00 33.43 1.52
2016 2516 6.655003 CACAGAAGAAGTGGATAAGGCTTTAA 59.345 38.462 4.45 0.00 33.43 1.52
2017 2517 6.013725 TCACAGAAGAAGTGGATAAGGCTTTA 60.014 38.462 4.45 0.00 37.58 1.85
2018 2518 5.006386 CACAGAAGAAGTGGATAAGGCTTT 58.994 41.667 4.45 0.00 33.43 3.51
2019 2519 4.287067 TCACAGAAGAAGTGGATAAGGCTT 59.713 41.667 4.58 4.58 37.58 4.35
2020 2520 3.840666 TCACAGAAGAAGTGGATAAGGCT 59.159 43.478 0.00 0.00 37.58 4.58
2021 2521 3.935828 GTCACAGAAGAAGTGGATAAGGC 59.064 47.826 0.00 0.00 37.58 4.35
2022 2522 4.082190 TCGTCACAGAAGAAGTGGATAAGG 60.082 45.833 0.00 0.00 37.58 2.69
2023 2523 5.060662 TCGTCACAGAAGAAGTGGATAAG 57.939 43.478 0.00 0.00 37.58 1.73
2024 2524 5.221362 TGTTCGTCACAGAAGAAGTGGATAA 60.221 40.000 0.00 0.00 37.58 1.75
2025 2525 4.279922 TGTTCGTCACAGAAGAAGTGGATA 59.720 41.667 0.00 0.00 37.58 2.59
2026 2526 3.069586 TGTTCGTCACAGAAGAAGTGGAT 59.930 43.478 0.00 0.00 37.58 3.41
2027 2527 2.429250 TGTTCGTCACAGAAGAAGTGGA 59.571 45.455 0.00 0.00 37.58 4.02
2028 2528 2.821546 TGTTCGTCACAGAAGAAGTGG 58.178 47.619 0.00 0.00 37.58 4.00
2029 2529 6.525121 TTTATGTTCGTCACAGAAGAAGTG 57.475 37.500 0.00 0.00 37.87 3.16
2030 2530 7.548196 TTTTTATGTTCGTCACAGAAGAAGT 57.452 32.000 0.00 0.00 37.87 3.01
2052 2552 1.688735 GGGCCTTCTTCTGCTGTTTTT 59.311 47.619 0.84 0.00 0.00 1.94
2053 2553 1.332195 GGGCCTTCTTCTGCTGTTTT 58.668 50.000 0.84 0.00 0.00 2.43
2054 2554 0.185901 TGGGCCTTCTTCTGCTGTTT 59.814 50.000 4.53 0.00 0.00 2.83
2055 2555 0.407139 ATGGGCCTTCTTCTGCTGTT 59.593 50.000 4.53 0.00 0.00 3.16
2056 2556 0.407139 AATGGGCCTTCTTCTGCTGT 59.593 50.000 4.53 0.00 0.00 4.40
2057 2557 1.553706 AAATGGGCCTTCTTCTGCTG 58.446 50.000 4.53 0.00 0.00 4.41
2058 2558 2.621668 GGTAAATGGGCCTTCTTCTGCT 60.622 50.000 4.53 0.00 0.00 4.24
2059 2559 1.751351 GGTAAATGGGCCTTCTTCTGC 59.249 52.381 4.53 0.00 0.00 4.26
2060 2560 3.372440 AGGTAAATGGGCCTTCTTCTG 57.628 47.619 4.53 0.00 0.00 3.02
2066 2566 4.023980 GCTTAAGAAGGTAAATGGGCCTT 58.976 43.478 6.67 0.00 46.75 4.35
2067 2567 3.632333 GCTTAAGAAGGTAAATGGGCCT 58.368 45.455 6.67 0.00 36.51 5.19
2068 2568 2.357952 CGCTTAAGAAGGTAAATGGGCC 59.642 50.000 6.67 0.00 0.00 5.80
2069 2569 2.357952 CCGCTTAAGAAGGTAAATGGGC 59.642 50.000 6.67 0.00 0.00 5.36
2070 2570 2.357952 GCCGCTTAAGAAGGTAAATGGG 59.642 50.000 6.67 0.00 0.00 4.00
2071 2571 3.279434 AGCCGCTTAAGAAGGTAAATGG 58.721 45.455 6.67 0.00 0.00 3.16
2072 2572 3.938963 TGAGCCGCTTAAGAAGGTAAATG 59.061 43.478 6.67 0.00 0.00 2.32
2073 2573 4.192317 CTGAGCCGCTTAAGAAGGTAAAT 58.808 43.478 6.67 0.00 0.00 1.40
2074 2574 3.596214 CTGAGCCGCTTAAGAAGGTAAA 58.404 45.455 6.67 0.00 0.00 2.01
2075 2575 2.677037 GCTGAGCCGCTTAAGAAGGTAA 60.677 50.000 6.67 0.00 0.00 2.85
2076 2576 1.134788 GCTGAGCCGCTTAAGAAGGTA 60.135 52.381 6.67 0.00 0.00 3.08
2077 2577 0.391793 GCTGAGCCGCTTAAGAAGGT 60.392 55.000 6.67 1.28 0.00 3.50
2078 2578 1.424493 CGCTGAGCCGCTTAAGAAGG 61.424 60.000 6.67 9.75 0.00 3.46
2079 2579 2.002127 CGCTGAGCCGCTTAAGAAG 58.998 57.895 6.67 0.00 0.00 2.85
2080 2580 4.185413 CGCTGAGCCGCTTAAGAA 57.815 55.556 6.67 0.00 0.00 2.52
2091 2591 0.805322 CTTAGACTGGCTGCGCTGAG 60.805 60.000 19.32 9.85 0.00 3.35
2092 2592 1.216444 CTTAGACTGGCTGCGCTGA 59.784 57.895 19.32 0.00 0.00 4.26
2093 2593 1.812922 CCTTAGACTGGCTGCGCTG 60.813 63.158 9.73 10.04 0.00 5.18
2094 2594 2.581354 CCTTAGACTGGCTGCGCT 59.419 61.111 9.73 0.00 0.00 5.92
2095 2595 2.512515 CCCTTAGACTGGCTGCGC 60.513 66.667 0.00 0.00 0.00 6.09
2096 2596 1.448540 CACCCTTAGACTGGCTGCG 60.449 63.158 0.00 0.00 0.00 5.18
2097 2597 0.107945 CTCACCCTTAGACTGGCTGC 60.108 60.000 0.00 0.00 0.00 5.25
2098 2598 1.480137 CTCTCACCCTTAGACTGGCTG 59.520 57.143 0.00 0.00 0.00 4.85
2099 2599 1.077993 ACTCTCACCCTTAGACTGGCT 59.922 52.381 0.00 0.00 0.00 4.75
2100 2600 1.562783 ACTCTCACCCTTAGACTGGC 58.437 55.000 0.00 0.00 0.00 4.85
2101 2601 4.345854 AGTAACTCTCACCCTTAGACTGG 58.654 47.826 0.00 0.00 0.00 4.00
2102 2602 6.095720 CCTTAGTAACTCTCACCCTTAGACTG 59.904 46.154 0.00 0.00 0.00 3.51
2103 2603 6.189133 CCTTAGTAACTCTCACCCTTAGACT 58.811 44.000 0.00 0.00 0.00 3.24
2104 2604 5.951148 ACCTTAGTAACTCTCACCCTTAGAC 59.049 44.000 0.00 0.00 0.00 2.59
2105 2605 6.150034 ACCTTAGTAACTCTCACCCTTAGA 57.850 41.667 0.00 0.00 0.00 2.10
2106 2606 6.854091 AACCTTAGTAACTCTCACCCTTAG 57.146 41.667 0.00 0.00 0.00 2.18
2107 2607 6.783977 TGAAACCTTAGTAACTCTCACCCTTA 59.216 38.462 0.00 0.00 0.00 2.69
2108 2608 5.605488 TGAAACCTTAGTAACTCTCACCCTT 59.395 40.000 0.00 0.00 0.00 3.95
2109 2609 5.011840 GTGAAACCTTAGTAACTCTCACCCT 59.988 44.000 0.00 0.00 0.00 4.34
2110 2610 5.221581 TGTGAAACCTTAGTAACTCTCACCC 60.222 44.000 0.00 0.00 34.36 4.61
2111 2611 5.850614 TGTGAAACCTTAGTAACTCTCACC 58.149 41.667 0.00 0.00 34.36 4.02
2112 2612 7.571428 GCATTGTGAAACCTTAGTAACTCTCAC 60.571 40.741 0.00 0.00 34.36 3.51
2113 2613 6.426937 GCATTGTGAAACCTTAGTAACTCTCA 59.573 38.462 0.00 0.00 34.36 3.27
2114 2614 6.401153 CGCATTGTGAAACCTTAGTAACTCTC 60.401 42.308 0.00 0.00 34.36 3.20
2115 2615 5.408604 CGCATTGTGAAACCTTAGTAACTCT 59.591 40.000 0.00 0.00 34.36 3.24
2116 2616 5.390567 CCGCATTGTGAAACCTTAGTAACTC 60.391 44.000 0.00 0.00 34.36 3.01
2117 2617 4.454504 CCGCATTGTGAAACCTTAGTAACT 59.545 41.667 0.00 0.00 34.36 2.24
2118 2618 4.214758 ACCGCATTGTGAAACCTTAGTAAC 59.785 41.667 0.00 0.00 34.36 2.50
2119 2619 4.391155 ACCGCATTGTGAAACCTTAGTAA 58.609 39.130 0.00 0.00 34.36 2.24
2120 2620 4.010667 ACCGCATTGTGAAACCTTAGTA 57.989 40.909 0.00 0.00 34.36 1.82
2121 2621 2.858745 ACCGCATTGTGAAACCTTAGT 58.141 42.857 0.00 0.00 34.36 2.24
2122 2622 3.666902 CGAACCGCATTGTGAAACCTTAG 60.667 47.826 0.00 0.00 34.36 2.18
2123 2623 2.224549 CGAACCGCATTGTGAAACCTTA 59.775 45.455 0.00 0.00 34.36 2.69
2124 2624 1.001815 CGAACCGCATTGTGAAACCTT 60.002 47.619 0.00 0.00 34.36 3.50
2125 2625 0.591170 CGAACCGCATTGTGAAACCT 59.409 50.000 0.00 0.00 34.36 3.50
2126 2626 0.386731 CCGAACCGCATTGTGAAACC 60.387 55.000 0.00 0.00 34.36 3.27
2127 2627 1.001745 GCCGAACCGCATTGTGAAAC 61.002 55.000 0.00 0.00 37.35 2.78
2128 2628 1.284408 GCCGAACCGCATTGTGAAA 59.716 52.632 0.00 0.00 0.00 2.69
2129 2629 2.950673 GCCGAACCGCATTGTGAA 59.049 55.556 0.00 0.00 0.00 3.18
2130 2630 3.418913 CGCCGAACCGCATTGTGA 61.419 61.111 0.00 0.00 0.00 3.58
2131 2631 3.418913 TCGCCGAACCGCATTGTG 61.419 61.111 0.00 0.00 0.00 3.33
2132 2632 3.419759 GTCGCCGAACCGCATTGT 61.420 61.111 0.00 0.00 0.00 2.71
2133 2633 2.832818 CTTGTCGCCGAACCGCATTG 62.833 60.000 0.00 0.00 0.00 2.82
2134 2634 2.666862 TTGTCGCCGAACCGCATT 60.667 55.556 0.00 0.00 0.00 3.56
2135 2635 3.118454 CTTGTCGCCGAACCGCAT 61.118 61.111 0.00 0.00 0.00 4.73
2136 2636 4.595538 ACTTGTCGCCGAACCGCA 62.596 61.111 0.00 0.00 0.00 5.69
2137 2637 4.072088 CACTTGTCGCCGAACCGC 62.072 66.667 0.00 0.00 0.00 5.68
2138 2638 4.072088 GCACTTGTCGCCGAACCG 62.072 66.667 0.00 0.00 0.00 4.44
2139 2639 2.251642 AAGCACTTGTCGCCGAACC 61.252 57.895 0.00 0.00 0.00 3.62
2140 2640 1.082756 CAAGCACTTGTCGCCGAAC 60.083 57.895 2.12 0.00 35.92 3.95
2141 2641 0.602638 ATCAAGCACTTGTCGCCGAA 60.603 50.000 10.05 0.00 41.16 4.30
2142 2642 1.005037 ATCAAGCACTTGTCGCCGA 60.005 52.632 10.05 0.00 41.16 5.54
2143 2643 1.016130 AGATCAAGCACTTGTCGCCG 61.016 55.000 10.05 0.00 41.16 6.46
2144 2644 0.445436 CAGATCAAGCACTTGTCGCC 59.555 55.000 10.05 0.00 41.16 5.54
2145 2645 1.136141 CACAGATCAAGCACTTGTCGC 60.136 52.381 10.05 1.99 41.16 5.19
2146 2646 2.407090 TCACAGATCAAGCACTTGTCG 58.593 47.619 10.05 6.72 41.16 4.35
2147 2647 4.569966 CCTATCACAGATCAAGCACTTGTC 59.430 45.833 10.05 7.38 41.16 3.18
2148 2648 4.511527 CCTATCACAGATCAAGCACTTGT 58.488 43.478 10.05 0.00 41.16 3.16
2149 2649 3.875727 CCCTATCACAGATCAAGCACTTG 59.124 47.826 3.94 3.94 41.71 3.16
2150 2650 3.521126 ACCCTATCACAGATCAAGCACTT 59.479 43.478 0.00 0.00 0.00 3.16
2151 2651 3.110705 ACCCTATCACAGATCAAGCACT 58.889 45.455 0.00 0.00 0.00 4.40
2152 2652 3.201290 CACCCTATCACAGATCAAGCAC 58.799 50.000 0.00 0.00 0.00 4.40
2153 2653 2.840038 ACACCCTATCACAGATCAAGCA 59.160 45.455 0.00 0.00 0.00 3.91
2154 2654 3.550437 ACACCCTATCACAGATCAAGC 57.450 47.619 0.00 0.00 0.00 4.01
2155 2655 3.624861 GCAACACCCTATCACAGATCAAG 59.375 47.826 0.00 0.00 0.00 3.02
2156 2656 3.264193 AGCAACACCCTATCACAGATCAA 59.736 43.478 0.00 0.00 0.00 2.57
2157 2657 2.840038 AGCAACACCCTATCACAGATCA 59.160 45.455 0.00 0.00 0.00 2.92
2158 2658 3.462021 GAGCAACACCCTATCACAGATC 58.538 50.000 0.00 0.00 0.00 2.75
2159 2659 2.159043 CGAGCAACACCCTATCACAGAT 60.159 50.000 0.00 0.00 0.00 2.90
2160 2660 1.204704 CGAGCAACACCCTATCACAGA 59.795 52.381 0.00 0.00 0.00 3.41
2161 2661 1.204704 TCGAGCAACACCCTATCACAG 59.795 52.381 0.00 0.00 0.00 3.66
2162 2662 1.204704 CTCGAGCAACACCCTATCACA 59.795 52.381 0.00 0.00 0.00 3.58
2163 2663 1.471676 CCTCGAGCAACACCCTATCAC 60.472 57.143 6.99 0.00 0.00 3.06
2164 2664 0.824109 CCTCGAGCAACACCCTATCA 59.176 55.000 6.99 0.00 0.00 2.15
2165 2665 0.530870 GCCTCGAGCAACACCCTATC 60.531 60.000 6.99 0.00 42.97 2.08
2166 2666 1.522569 GCCTCGAGCAACACCCTAT 59.477 57.895 6.99 0.00 42.97 2.57
2167 2667 2.978824 GCCTCGAGCAACACCCTA 59.021 61.111 6.99 0.00 42.97 3.53
2176 2676 1.427020 GCACAGATTTGCCTCGAGC 59.573 57.895 6.99 3.23 44.14 5.03
2183 2683 1.068055 CCTTGAGTGGCACAGATTTGC 60.068 52.381 21.41 0.52 41.80 3.68
2184 2684 2.233271 ACCTTGAGTGGCACAGATTTG 58.767 47.619 21.41 5.99 41.80 2.32
2185 2685 2.664402 ACCTTGAGTGGCACAGATTT 57.336 45.000 21.41 0.00 41.80 2.17
2186 2686 2.664402 AACCTTGAGTGGCACAGATT 57.336 45.000 21.41 0.00 41.80 2.40
2187 2687 2.664402 AAACCTTGAGTGGCACAGAT 57.336 45.000 21.41 0.00 41.80 2.90
2188 2688 2.435372 AAAACCTTGAGTGGCACAGA 57.565 45.000 21.41 1.99 41.80 3.41
2189 2689 2.554032 CCTAAAACCTTGAGTGGCACAG 59.446 50.000 21.41 8.48 41.80 3.66
2190 2690 2.582052 CCTAAAACCTTGAGTGGCACA 58.418 47.619 21.41 0.00 0.00 4.57
2191 2691 1.886542 CCCTAAAACCTTGAGTGGCAC 59.113 52.381 10.29 10.29 0.00 5.01
2192 2692 1.497286 ACCCTAAAACCTTGAGTGGCA 59.503 47.619 0.00 0.00 0.00 4.92
2193 2693 1.886542 CACCCTAAAACCTTGAGTGGC 59.113 52.381 0.00 0.00 0.00 5.01
2194 2694 3.146847 GTCACCCTAAAACCTTGAGTGG 58.853 50.000 0.00 0.00 0.00 4.00
2195 2695 3.815809 TGTCACCCTAAAACCTTGAGTG 58.184 45.455 0.00 0.00 0.00 3.51
2196 2696 4.204799 GTTGTCACCCTAAAACCTTGAGT 58.795 43.478 0.00 0.00 0.00 3.41
2197 2697 3.568430 GGTTGTCACCCTAAAACCTTGAG 59.432 47.826 0.00 0.00 39.21 3.02
2198 2698 3.558033 GGTTGTCACCCTAAAACCTTGA 58.442 45.455 0.00 0.00 39.21 3.02
2202 2702 2.148768 CGAGGTTGTCACCCTAAAACC 58.851 52.381 0.00 0.00 45.63 3.27
2203 2703 2.148768 CCGAGGTTGTCACCCTAAAAC 58.851 52.381 0.00 0.00 45.63 2.43
2204 2704 2.048601 TCCGAGGTTGTCACCCTAAAA 58.951 47.619 0.00 0.00 45.63 1.52
2205 2705 1.719529 TCCGAGGTTGTCACCCTAAA 58.280 50.000 0.00 0.00 45.63 1.85
2206 2706 1.553248 CATCCGAGGTTGTCACCCTAA 59.447 52.381 0.00 0.00 45.63 2.69
2207 2707 1.191535 CATCCGAGGTTGTCACCCTA 58.808 55.000 0.00 0.00 45.63 3.53
2208 2708 0.836400 ACATCCGAGGTTGTCACCCT 60.836 55.000 0.00 0.00 45.63 4.34
2209 2709 0.391263 GACATCCGAGGTTGTCACCC 60.391 60.000 21.89 2.41 45.63 4.61
2210 2710 0.320374 TGACATCCGAGGTTGTCACC 59.680 55.000 24.32 7.46 44.75 4.02
2211 2711 3.906660 TGACATCCGAGGTTGTCAC 57.093 52.632 24.32 8.03 44.75 3.67
2212 2712 2.698803 CATTGACATCCGAGGTTGTCA 58.301 47.619 24.32 24.32 46.60 3.58
2213 2713 1.398390 GCATTGACATCCGAGGTTGTC 59.602 52.381 20.66 20.66 42.18 3.18
2214 2714 1.003580 AGCATTGACATCCGAGGTTGT 59.996 47.619 5.60 5.60 0.00 3.32
2215 2715 1.742761 AGCATTGACATCCGAGGTTG 58.257 50.000 0.00 0.00 0.00 3.77
2216 2716 2.158900 CCTAGCATTGACATCCGAGGTT 60.159 50.000 0.00 0.00 0.00 3.50
2217 2717 1.414181 CCTAGCATTGACATCCGAGGT 59.586 52.381 0.00 0.00 0.00 3.85
2218 2718 1.270518 CCCTAGCATTGACATCCGAGG 60.271 57.143 0.00 0.00 0.00 4.63
2219 2719 1.414181 ACCCTAGCATTGACATCCGAG 59.586 52.381 0.00 0.00 0.00 4.63
2220 2720 1.496060 ACCCTAGCATTGACATCCGA 58.504 50.000 0.00 0.00 0.00 4.55
2221 2721 2.332063 AACCCTAGCATTGACATCCG 57.668 50.000 0.00 0.00 0.00 4.18
2222 2722 3.565902 GCTAAACCCTAGCATTGACATCC 59.434 47.826 0.00 0.00 40.14 3.51
2223 2723 4.455606 AGCTAAACCCTAGCATTGACATC 58.544 43.478 6.54 0.00 42.68 3.06
2224 2724 4.510167 AGCTAAACCCTAGCATTGACAT 57.490 40.909 6.54 0.00 42.68 3.06
2225 2725 4.301072 AAGCTAAACCCTAGCATTGACA 57.699 40.909 6.54 0.00 42.68 3.58
2226 2726 5.402398 CAAAAGCTAAACCCTAGCATTGAC 58.598 41.667 12.99 0.00 42.68 3.18
2227 2727 4.462483 CCAAAAGCTAAACCCTAGCATTGA 59.538 41.667 17.06 0.00 42.68 2.57
2228 2728 4.381932 CCCAAAAGCTAAACCCTAGCATTG 60.382 45.833 6.54 9.80 42.68 2.82
2229 2729 3.769300 CCCAAAAGCTAAACCCTAGCATT 59.231 43.478 6.54 0.00 42.68 3.56
2230 2730 3.245622 ACCCAAAAGCTAAACCCTAGCAT 60.246 43.478 6.54 0.00 42.68 3.79
2231 2731 2.109304 ACCCAAAAGCTAAACCCTAGCA 59.891 45.455 6.54 0.00 42.68 3.49
2232 2732 2.803956 ACCCAAAAGCTAAACCCTAGC 58.196 47.619 0.00 0.00 40.67 3.42
2233 2733 4.217767 GTCAACCCAAAAGCTAAACCCTAG 59.782 45.833 0.00 0.00 0.00 3.02
2234 2734 4.146564 GTCAACCCAAAAGCTAAACCCTA 58.853 43.478 0.00 0.00 0.00 3.53
2235 2735 2.963101 GTCAACCCAAAAGCTAAACCCT 59.037 45.455 0.00 0.00 0.00 4.34
2236 2736 2.696187 TGTCAACCCAAAAGCTAAACCC 59.304 45.455 0.00 0.00 0.00 4.11
2237 2737 4.394439 TTGTCAACCCAAAAGCTAAACC 57.606 40.909 0.00 0.00 0.00 3.27
2238 2738 4.749598 CCATTGTCAACCCAAAAGCTAAAC 59.250 41.667 0.00 0.00 0.00 2.01
2239 2739 4.407296 ACCATTGTCAACCCAAAAGCTAAA 59.593 37.500 0.00 0.00 0.00 1.85
2240 2740 3.964031 ACCATTGTCAACCCAAAAGCTAA 59.036 39.130 0.00 0.00 0.00 3.09
2241 2741 3.320541 CACCATTGTCAACCCAAAAGCTA 59.679 43.478 0.00 0.00 0.00 3.32
2242 2742 2.102925 CACCATTGTCAACCCAAAAGCT 59.897 45.455 0.00 0.00 0.00 3.74
2243 2743 2.102252 TCACCATTGTCAACCCAAAAGC 59.898 45.455 0.00 0.00 0.00 3.51
2244 2744 3.131933 TGTCACCATTGTCAACCCAAAAG 59.868 43.478 0.00 0.00 0.00 2.27
2245 2745 3.099905 TGTCACCATTGTCAACCCAAAA 58.900 40.909 0.00 0.00 0.00 2.44
2246 2746 2.692557 CTGTCACCATTGTCAACCCAAA 59.307 45.455 0.00 0.00 0.00 3.28
2247 2747 2.305928 CTGTCACCATTGTCAACCCAA 58.694 47.619 0.00 0.00 0.00 4.12
2248 2748 1.979855 CTGTCACCATTGTCAACCCA 58.020 50.000 0.00 0.00 0.00 4.51
2249 2749 0.598065 GCTGTCACCATTGTCAACCC 59.402 55.000 0.00 0.00 0.00 4.11
2250 2750 0.598065 GGCTGTCACCATTGTCAACC 59.402 55.000 0.00 0.00 0.00 3.77
2251 2751 1.537202 GAGGCTGTCACCATTGTCAAC 59.463 52.381 0.00 0.00 0.00 3.18
2252 2752 1.142667 TGAGGCTGTCACCATTGTCAA 59.857 47.619 0.00 0.00 0.00 3.18
2253 2753 0.764271 TGAGGCTGTCACCATTGTCA 59.236 50.000 0.00 0.00 0.00 3.58
2254 2754 2.119801 ATGAGGCTGTCACCATTGTC 57.880 50.000 0.00 0.00 38.28 3.18
2255 2755 3.054139 ACATATGAGGCTGTCACCATTGT 60.054 43.478 10.38 0.00 38.28 2.71
2256 2756 3.548770 ACATATGAGGCTGTCACCATTG 58.451 45.455 10.38 0.00 38.28 2.82
2257 2757 3.939740 ACATATGAGGCTGTCACCATT 57.060 42.857 10.38 0.00 38.28 3.16
2258 2758 3.054139 ACAACATATGAGGCTGTCACCAT 60.054 43.478 10.38 0.00 38.28 3.55
2259 2759 2.305635 ACAACATATGAGGCTGTCACCA 59.694 45.455 10.38 0.00 38.28 4.17
2260 2760 2.991250 ACAACATATGAGGCTGTCACC 58.009 47.619 10.38 0.00 38.28 4.02
2261 2761 4.332819 GGTAACAACATATGAGGCTGTCAC 59.667 45.833 10.38 3.65 38.28 3.67
2262 2762 4.225042 AGGTAACAACATATGAGGCTGTCA 59.775 41.667 10.38 0.00 38.51 3.58
2263 2763 4.770795 AGGTAACAACATATGAGGCTGTC 58.229 43.478 10.38 0.00 41.41 3.51
2264 2764 4.844349 AGGTAACAACATATGAGGCTGT 57.156 40.909 10.38 4.39 41.41 4.40
2265 2765 4.943705 ACAAGGTAACAACATATGAGGCTG 59.056 41.667 10.38 3.77 41.41 4.85
2266 2766 5.179452 ACAAGGTAACAACATATGAGGCT 57.821 39.130 10.38 0.00 41.41 4.58
2267 2767 5.393027 CCAACAAGGTAACAACATATGAGGC 60.393 44.000 10.38 0.00 41.41 4.70
2268 2768 5.943416 TCCAACAAGGTAACAACATATGAGG 59.057 40.000 10.38 3.26 39.02 3.86
2269 2769 6.878923 TCTCCAACAAGGTAACAACATATGAG 59.121 38.462 10.38 4.05 39.02 2.90
2270 2770 6.653320 GTCTCCAACAAGGTAACAACATATGA 59.347 38.462 10.38 0.00 39.02 2.15
2271 2771 6.402118 CGTCTCCAACAAGGTAACAACATATG 60.402 42.308 0.00 0.00 39.02 1.78
2272 2772 5.642063 CGTCTCCAACAAGGTAACAACATAT 59.358 40.000 0.00 0.00 39.02 1.78
2273 2773 4.992319 CGTCTCCAACAAGGTAACAACATA 59.008 41.667 0.00 0.00 39.02 2.29
2274 2774 3.813166 CGTCTCCAACAAGGTAACAACAT 59.187 43.478 0.00 0.00 39.02 2.71
2275 2775 3.199677 CGTCTCCAACAAGGTAACAACA 58.800 45.455 0.00 0.00 39.02 3.33
2276 2776 3.200483 ACGTCTCCAACAAGGTAACAAC 58.800 45.455 0.00 0.00 39.02 3.32
2277 2777 3.118702 TGACGTCTCCAACAAGGTAACAA 60.119 43.478 17.92 0.00 39.02 2.83
2278 2778 2.431419 TGACGTCTCCAACAAGGTAACA 59.569 45.455 17.92 0.00 39.02 2.41
2279 2779 3.102052 TGACGTCTCCAACAAGGTAAC 57.898 47.619 17.92 0.00 39.02 2.50
2280 2780 3.133362 AGTTGACGTCTCCAACAAGGTAA 59.867 43.478 17.92 0.00 44.54 2.85
2281 2781 2.696707 AGTTGACGTCTCCAACAAGGTA 59.303 45.455 17.92 0.00 44.54 3.08
2282 2782 1.485066 AGTTGACGTCTCCAACAAGGT 59.515 47.619 17.92 0.00 44.54 3.50
2283 2783 2.240493 AGTTGACGTCTCCAACAAGG 57.760 50.000 17.92 0.00 44.54 3.61
2284 2784 3.978687 AGTAGTTGACGTCTCCAACAAG 58.021 45.455 17.92 0.00 44.54 3.16
2285 2785 4.116961 CAAGTAGTTGACGTCTCCAACAA 58.883 43.478 17.92 0.00 44.54 2.83
2286 2786 3.713288 CAAGTAGTTGACGTCTCCAACA 58.287 45.455 17.92 2.47 44.54 3.33
2287 2787 2.475487 GCAAGTAGTTGACGTCTCCAAC 59.525 50.000 17.92 13.39 42.97 3.77
2288 2788 2.364324 AGCAAGTAGTTGACGTCTCCAA 59.636 45.455 17.92 0.00 35.46 3.53
2289 2789 1.961394 AGCAAGTAGTTGACGTCTCCA 59.039 47.619 17.92 0.00 35.46 3.86
2290 2790 2.726832 AGCAAGTAGTTGACGTCTCC 57.273 50.000 17.92 7.02 35.46 3.71
2291 2791 2.731976 CCAAGCAAGTAGTTGACGTCTC 59.268 50.000 17.92 9.96 35.46 3.36
2292 2792 2.364324 TCCAAGCAAGTAGTTGACGTCT 59.636 45.455 17.92 0.00 35.46 4.18
2293 2793 2.731976 CTCCAAGCAAGTAGTTGACGTC 59.268 50.000 14.64 9.11 35.46 4.34
2294 2794 2.102588 ACTCCAAGCAAGTAGTTGACGT 59.897 45.455 14.64 0.00 35.46 4.34
2295 2795 2.731976 GACTCCAAGCAAGTAGTTGACG 59.268 50.000 14.64 1.26 35.46 4.35
2296 2796 3.728845 TGACTCCAAGCAAGTAGTTGAC 58.271 45.455 14.64 5.65 35.46 3.18
2297 2797 4.415881 TTGACTCCAAGCAAGTAGTTGA 57.584 40.909 14.64 0.00 35.46 3.18
2298 2798 4.576463 ACTTTGACTCCAAGCAAGTAGTTG 59.424 41.667 5.89 5.89 36.67 3.16
2299 2799 4.781934 ACTTTGACTCCAAGCAAGTAGTT 58.218 39.130 0.00 0.00 33.23 2.24
2300 2800 4.423625 ACTTTGACTCCAAGCAAGTAGT 57.576 40.909 0.00 0.00 33.23 2.73
2301 2801 4.023707 CCAACTTTGACTCCAAGCAAGTAG 60.024 45.833 0.00 0.00 33.23 2.57
2302 2802 3.882888 CCAACTTTGACTCCAAGCAAGTA 59.117 43.478 0.00 0.00 33.23 2.24
2303 2803 2.689983 CCAACTTTGACTCCAAGCAAGT 59.310 45.455 0.00 0.00 33.23 3.16
2304 2804 2.689983 ACCAACTTTGACTCCAAGCAAG 59.310 45.455 0.00 0.00 33.23 4.01
2305 2805 2.426738 CACCAACTTTGACTCCAAGCAA 59.573 45.455 0.00 0.00 33.23 3.91
2306 2806 2.023673 CACCAACTTTGACTCCAAGCA 58.976 47.619 0.00 0.00 33.23 3.91
2307 2807 2.297701 TCACCAACTTTGACTCCAAGC 58.702 47.619 0.00 0.00 33.23 4.01
2308 2808 4.199310 TCTTCACCAACTTTGACTCCAAG 58.801 43.478 0.00 0.00 33.23 3.61
2309 2809 4.229304 TCTTCACCAACTTTGACTCCAA 57.771 40.909 0.00 0.00 0.00 3.53
2310 2810 3.924114 TCTTCACCAACTTTGACTCCA 57.076 42.857 0.00 0.00 0.00 3.86
2311 2811 4.036852 CCTTTCTTCACCAACTTTGACTCC 59.963 45.833 0.00 0.00 0.00 3.85
2312 2812 4.036852 CCCTTTCTTCACCAACTTTGACTC 59.963 45.833 0.00 0.00 0.00 3.36
2313 2813 3.954258 CCCTTTCTTCACCAACTTTGACT 59.046 43.478 0.00 0.00 0.00 3.41
2314 2814 3.699538 ACCCTTTCTTCACCAACTTTGAC 59.300 43.478 0.00 0.00 0.00 3.18
2315 2815 3.699038 CACCCTTTCTTCACCAACTTTGA 59.301 43.478 0.00 0.00 0.00 2.69
2316 2816 3.699038 TCACCCTTTCTTCACCAACTTTG 59.301 43.478 0.00 0.00 0.00 2.77
2317 2817 3.976015 TCACCCTTTCTTCACCAACTTT 58.024 40.909 0.00 0.00 0.00 2.66
2318 2818 3.662759 TCACCCTTTCTTCACCAACTT 57.337 42.857 0.00 0.00 0.00 2.66
2319 2819 3.884037 ATCACCCTTTCTTCACCAACT 57.116 42.857 0.00 0.00 0.00 3.16
2320 2820 4.459337 CCTAATCACCCTTTCTTCACCAAC 59.541 45.833 0.00 0.00 0.00 3.77
2321 2821 4.352595 TCCTAATCACCCTTTCTTCACCAA 59.647 41.667 0.00 0.00 0.00 3.67
2322 2822 3.913799 TCCTAATCACCCTTTCTTCACCA 59.086 43.478 0.00 0.00 0.00 4.17
2323 2823 4.569719 TCCTAATCACCCTTTCTTCACC 57.430 45.455 0.00 0.00 0.00 4.02
2324 2824 4.884164 CCATCCTAATCACCCTTTCTTCAC 59.116 45.833 0.00 0.00 0.00 3.18
2325 2825 4.628715 GCCATCCTAATCACCCTTTCTTCA 60.629 45.833 0.00 0.00 0.00 3.02
2326 2826 3.885901 GCCATCCTAATCACCCTTTCTTC 59.114 47.826 0.00 0.00 0.00 2.87
2327 2827 3.529319 AGCCATCCTAATCACCCTTTCTT 59.471 43.478 0.00 0.00 0.00 2.52
2328 2828 3.126453 AGCCATCCTAATCACCCTTTCT 58.874 45.455 0.00 0.00 0.00 2.52
2329 2829 3.584733 AGCCATCCTAATCACCCTTTC 57.415 47.619 0.00 0.00 0.00 2.62
2330 2830 4.026052 CAAAGCCATCCTAATCACCCTTT 58.974 43.478 0.00 0.00 0.00 3.11
2331 2831 3.635591 CAAAGCCATCCTAATCACCCTT 58.364 45.455 0.00 0.00 0.00 3.95
2332 2832 2.687914 GCAAAGCCATCCTAATCACCCT 60.688 50.000 0.00 0.00 0.00 4.34
2333 2833 1.683385 GCAAAGCCATCCTAATCACCC 59.317 52.381 0.00 0.00 0.00 4.61
2334 2834 1.334869 CGCAAAGCCATCCTAATCACC 59.665 52.381 0.00 0.00 0.00 4.02
2335 2835 2.288666 TCGCAAAGCCATCCTAATCAC 58.711 47.619 0.00 0.00 0.00 3.06
2336 2836 2.682856 GTTCGCAAAGCCATCCTAATCA 59.317 45.455 0.00 0.00 0.00 2.57
2337 2837 2.286418 CGTTCGCAAAGCCATCCTAATC 60.286 50.000 0.00 0.00 0.00 1.75
2338 2838 1.670811 CGTTCGCAAAGCCATCCTAAT 59.329 47.619 0.00 0.00 0.00 1.73
2339 2839 1.083489 CGTTCGCAAAGCCATCCTAA 58.917 50.000 0.00 0.00 0.00 2.69
2340 2840 0.248012 TCGTTCGCAAAGCCATCCTA 59.752 50.000 0.00 0.00 0.00 2.94
2341 2841 1.003839 TCGTTCGCAAAGCCATCCT 60.004 52.632 0.00 0.00 0.00 3.24
2342 2842 1.134694 GTCGTTCGCAAAGCCATCC 59.865 57.895 0.00 0.00 0.00 3.51
2343 2843 0.447801 ATGTCGTTCGCAAAGCCATC 59.552 50.000 0.00 0.00 0.00 3.51
2344 2844 0.447801 GATGTCGTTCGCAAAGCCAT 59.552 50.000 0.00 0.00 0.00 4.40
2345 2845 0.882484 TGATGTCGTTCGCAAAGCCA 60.882 50.000 0.00 0.00 0.00 4.75
2346 2846 0.237235 TTGATGTCGTTCGCAAAGCC 59.763 50.000 0.00 0.00 0.00 4.35
2347 2847 1.069906 AGTTGATGTCGTTCGCAAAGC 60.070 47.619 0.00 0.00 0.00 3.51
2348 2848 2.563976 CAGTTGATGTCGTTCGCAAAG 58.436 47.619 0.00 0.00 0.00 2.77
2349 2849 1.262950 CCAGTTGATGTCGTTCGCAAA 59.737 47.619 0.00 0.00 0.00 3.68
2350 2850 0.865111 CCAGTTGATGTCGTTCGCAA 59.135 50.000 0.00 0.00 0.00 4.85
2351 2851 0.249699 ACCAGTTGATGTCGTTCGCA 60.250 50.000 0.00 0.00 0.00 5.10
2352 2852 1.705256 TACCAGTTGATGTCGTTCGC 58.295 50.000 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.