Multiple sequence alignment - TraesCS3B01G307600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G307600 chr3B 100.000 4591 0 0 1 4591 493658938 493654348 0.000000e+00 8479.0
1 TraesCS3B01G307600 chr3B 92.609 230 15 2 1 230 493847590 493847363 3.420000e-86 329.0
2 TraesCS3B01G307600 chr3B 92.308 169 12 1 313 481 493847321 493847154 5.940000e-59 239.0
3 TraesCS3B01G307600 chr3B 93.243 74 5 0 238 311 29485317 29485244 4.860000e-20 110.0
4 TraesCS3B01G307600 chr3B 93.243 74 5 0 238 311 161708635 161708708 4.860000e-20 110.0
5 TraesCS3B01G307600 chr3D 92.200 3295 184 31 673 3941 378581451 378578204 0.000000e+00 4593.0
6 TraesCS3B01G307600 chr3D 85.575 409 25 6 4182 4589 378577939 378577564 9.260000e-107 398.0
7 TraesCS3B01G307600 chr3D 92.208 77 4 2 3954 4029 378578127 378578052 1.750000e-19 108.0
8 TraesCS3B01G307600 chr3D 97.727 44 0 1 187 230 491959961 491960003 1.770000e-09 75.0
9 TraesCS3B01G307600 chr3A 91.103 2158 125 22 519 2627 502514135 502511996 0.000000e+00 2859.0
10 TraesCS3B01G307600 chr3A 89.172 1376 87 23 2720 4071 502511961 502510624 0.000000e+00 1659.0
11 TraesCS3B01G307600 chr3A 85.945 434 37 13 4176 4589 502510588 502510159 4.220000e-120 442.0
12 TraesCS3B01G307600 chr3A 95.775 71 3 0 241 311 707699379 707699449 1.040000e-21 115.0
13 TraesCS3B01G307600 chr3A 95.775 71 3 0 241 311 707733461 707733531 1.040000e-21 115.0
14 TraesCS3B01G307600 chr3A 94.366 71 4 0 241 311 128154932 128154862 4.860000e-20 110.0
15 TraesCS3B01G307600 chr2D 91.515 165 14 0 313 477 325807411 325807575 1.280000e-55 228.0
16 TraesCS3B01G307600 chr2B 90.909 165 14 1 313 477 467859981 467860144 2.150000e-53 220.0
17 TraesCS3B01G307600 chr5A 89.941 169 16 1 313 480 397507108 397507276 2.780000e-52 217.0
18 TraesCS3B01G307600 chr5A 89.349 169 17 1 313 480 631584000 631584168 1.290000e-50 211.0
19 TraesCS3B01G307600 chr4D 89.941 169 16 1 313 480 32419020 32418852 2.780000e-52 217.0
20 TraesCS3B01G307600 chr4D 89.286 56 3 3 173 226 465415524 465415578 2.960000e-07 67.6
21 TraesCS3B01G307600 chr1A 90.303 165 16 0 313 477 505074961 505075125 2.780000e-52 217.0
22 TraesCS3B01G307600 chr1A 92.000 75 6 0 237 311 105606268 105606342 6.280000e-19 106.0
23 TraesCS3B01G307600 chr1A 89.286 56 2 3 187 239 303010090 303010144 2.960000e-07 67.6
24 TraesCS3B01G307600 chr7A 85.854 205 20 4 311 506 125104486 125104282 4.650000e-50 209.0
25 TraesCS3B01G307600 chr7A 94.340 53 0 2 187 237 125104567 125104516 1.370000e-10 78.7
26 TraesCS3B01G307600 chr6D 89.349 169 15 3 313 480 461412814 461412980 4.650000e-50 209.0
27 TraesCS3B01G307600 chr6D 93.421 76 4 1 237 311 400294263 400294338 1.350000e-20 111.0
28 TraesCS3B01G307600 chrUn 95.775 71 3 0 241 311 383713989 383713919 1.040000e-21 115.0
29 TraesCS3B01G307600 chr2A 94.366 71 4 0 241 311 303731285 303731215 4.860000e-20 110.0
30 TraesCS3B01G307600 chr5D 84.259 108 17 0 1 108 377266171 377266064 6.280000e-19 106.0
31 TraesCS3B01G307600 chr6B 89.831 59 3 3 174 230 672891412 672891355 6.370000e-09 73.1
32 TraesCS3B01G307600 chr5B 91.071 56 2 2 175 230 136622164 136622112 6.370000e-09 73.1
33 TraesCS3B01G307600 chr4A 90.909 55 4 1 176 230 739491441 739491494 6.370000e-09 73.1
34 TraesCS3B01G307600 chr7D 82.022 89 10 5 7 90 425115043 425115130 2.290000e-08 71.3
35 TraesCS3B01G307600 chr7B 87.692 65 2 6 171 230 498577779 498577842 2.290000e-08 71.3
36 TraesCS3B01G307600 chr7B 81.319 91 11 5 8 93 421056840 421056751 8.240000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G307600 chr3B 493654348 493658938 4590 True 8479.000000 8479 100.000000 1 4591 1 chr3B.!!$R2 4590
1 TraesCS3B01G307600 chr3D 378577564 378581451 3887 True 1699.666667 4593 89.994333 673 4589 3 chr3D.!!$R1 3916
2 TraesCS3B01G307600 chr3A 502510159 502514135 3976 True 1653.333333 2859 88.740000 519 4589 3 chr3A.!!$R2 4070

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
174 175 0.027455 CACGCACTTTGCTCAACGAA 59.973 50.0 0.00 0.0 42.25 3.85 F
965 982 0.104934 GGAGGAGGAGGGCCAAGATA 60.105 60.0 6.18 0.0 36.29 1.98 F
992 1009 0.865769 CCGAATCCGAATAAAGCCGG 59.134 55.0 0.00 0.0 46.57 6.13 F
1252 1272 0.879765 CAGGTTTGCTCCTTCTGCTG 59.120 55.0 0.00 0.0 35.37 4.41 F
3094 3164 0.465460 TGCTCCCCATGATAAACGGC 60.465 55.0 0.00 0.0 0.00 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1569 1600 1.870402 TGCAACCATGAAGTACACACG 59.130 47.619 0.00 0.0 0.00 4.49 R
2859 2921 2.501723 ACGAAGTCCATAGCCATGTTCT 59.498 45.455 0.00 0.0 29.74 3.01 R
2902 2972 2.802816 GCTCGTGCTATCCTACAAATGG 59.197 50.000 1.41 0.0 36.03 3.16 R
3188 3258 3.321968 TCCGATGAGAGAGAGAGAGAGAG 59.678 52.174 0.00 0.0 0.00 3.20 R
4544 4759 0.327924 ATGGCCTGGATGTTGACGAA 59.672 50.000 3.32 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 8.761575 AAAAATGTCACTGTTTATATGCTTGG 57.238 30.769 0.00 0.00 0.00 3.61
38 39 6.455360 AATGTCACTGTTTATATGCTTGGG 57.545 37.500 0.00 0.00 0.00 4.12
39 40 4.269183 TGTCACTGTTTATATGCTTGGGG 58.731 43.478 0.00 0.00 0.00 4.96
40 41 4.018870 TGTCACTGTTTATATGCTTGGGGA 60.019 41.667 0.00 0.00 0.00 4.81
41 42 5.133221 GTCACTGTTTATATGCTTGGGGAT 58.867 41.667 0.00 0.00 0.00 3.85
42 43 5.009010 GTCACTGTTTATATGCTTGGGGATG 59.991 44.000 0.00 0.00 0.00 3.51
43 44 4.279169 CACTGTTTATATGCTTGGGGATGG 59.721 45.833 0.00 0.00 0.00 3.51
44 45 3.828451 CTGTTTATATGCTTGGGGATGGG 59.172 47.826 0.00 0.00 0.00 4.00
45 46 2.562738 GTTTATATGCTTGGGGATGGGC 59.437 50.000 0.00 0.00 0.00 5.36
46 47 1.759101 TATATGCTTGGGGATGGGCT 58.241 50.000 0.00 0.00 0.00 5.19
47 48 0.407139 ATATGCTTGGGGATGGGCTC 59.593 55.000 0.00 0.00 0.00 4.70
48 49 2.055689 TATGCTTGGGGATGGGCTCG 62.056 60.000 0.00 0.00 0.00 5.03
49 50 4.883354 GCTTGGGGATGGGCTCGG 62.883 72.222 0.00 0.00 0.00 4.63
50 51 4.195334 CTTGGGGATGGGCTCGGG 62.195 72.222 0.00 0.00 0.00 5.14
54 55 4.883354 GGGATGGGCTCGGGCTTG 62.883 72.222 7.48 0.00 38.73 4.01
55 56 4.883354 GGATGGGCTCGGGCTTGG 62.883 72.222 7.48 0.00 38.73 3.61
56 57 4.883354 GATGGGCTCGGGCTTGGG 62.883 72.222 7.48 0.00 38.73 4.12
59 60 4.129148 GGGCTCGGGCTTGGGATT 62.129 66.667 7.48 0.00 38.73 3.01
60 61 2.043953 GGCTCGGGCTTGGGATTT 60.044 61.111 7.48 0.00 38.73 2.17
61 62 1.682344 GGCTCGGGCTTGGGATTTT 60.682 57.895 7.48 0.00 38.73 1.82
62 63 1.257750 GGCTCGGGCTTGGGATTTTT 61.258 55.000 7.48 0.00 38.73 1.94
77 78 2.984871 TTTTTGCTTCGGGCTTTGC 58.015 47.368 3.33 0.00 42.39 3.68
98 99 4.189580 GCCTGGCCCGGCTTATGA 62.190 66.667 29.41 0.00 46.63 2.15
99 100 2.839098 CCTGGCCCGGCTTATGAT 59.161 61.111 9.86 0.00 0.00 2.45
100 101 1.302832 CCTGGCCCGGCTTATGATC 60.303 63.158 9.86 0.00 0.00 2.92
101 102 1.669115 CTGGCCCGGCTTATGATCG 60.669 63.158 9.86 0.00 0.00 3.69
102 103 2.358737 GGCCCGGCTTATGATCGG 60.359 66.667 9.86 0.00 43.05 4.18
105 106 4.675404 CCGGCTTATGATCGGGTC 57.325 61.111 0.00 0.00 40.07 4.46
106 107 2.050269 CCGGCTTATGATCGGGTCT 58.950 57.895 0.00 0.00 40.07 3.85
107 108 1.254026 CCGGCTTATGATCGGGTCTA 58.746 55.000 0.00 0.00 40.07 2.59
108 109 1.067776 CCGGCTTATGATCGGGTCTAC 60.068 57.143 0.00 0.00 40.07 2.59
109 110 1.611977 CGGCTTATGATCGGGTCTACA 59.388 52.381 0.00 0.00 0.00 2.74
110 111 2.035449 CGGCTTATGATCGGGTCTACAA 59.965 50.000 0.00 0.00 0.00 2.41
111 112 3.391049 GGCTTATGATCGGGTCTACAAC 58.609 50.000 0.00 0.00 0.00 3.32
119 120 2.745037 GGTCTACAACCCACCGCA 59.255 61.111 0.00 0.00 42.85 5.69
120 121 1.071814 GGTCTACAACCCACCGCAA 59.928 57.895 0.00 0.00 42.85 4.85
121 122 1.232621 GGTCTACAACCCACCGCAAC 61.233 60.000 0.00 0.00 42.85 4.17
122 123 0.533308 GTCTACAACCCACCGCAACA 60.533 55.000 0.00 0.00 0.00 3.33
123 124 0.250124 TCTACAACCCACCGCAACAG 60.250 55.000 0.00 0.00 0.00 3.16
124 125 1.852067 CTACAACCCACCGCAACAGC 61.852 60.000 0.00 0.00 0.00 4.40
125 126 3.977244 CAACCCACCGCAACAGCC 61.977 66.667 0.00 0.00 0.00 4.85
141 142 3.884350 CCGCCGCAGCTACTCGTA 61.884 66.667 0.00 0.00 36.60 3.43
142 143 2.651232 CGCCGCAGCTACTCGTAC 60.651 66.667 0.00 0.00 36.60 3.67
143 144 2.799371 GCCGCAGCTACTCGTACT 59.201 61.111 0.00 0.00 35.50 2.73
144 145 1.586564 GCCGCAGCTACTCGTACTG 60.587 63.158 0.00 0.00 35.50 2.74
148 149 2.189833 CAGCTACTCGTACTGCCCA 58.810 57.895 0.00 0.00 0.00 5.36
149 150 0.747255 CAGCTACTCGTACTGCCCAT 59.253 55.000 0.00 0.00 0.00 4.00
150 151 1.137086 CAGCTACTCGTACTGCCCATT 59.863 52.381 0.00 0.00 0.00 3.16
151 152 1.409427 AGCTACTCGTACTGCCCATTC 59.591 52.381 0.00 0.00 0.00 2.67
152 153 1.538419 GCTACTCGTACTGCCCATTCC 60.538 57.143 0.00 0.00 0.00 3.01
153 154 1.068741 CTACTCGTACTGCCCATTCCC 59.931 57.143 0.00 0.00 0.00 3.97
154 155 1.146263 CTCGTACTGCCCATTCCCC 59.854 63.158 0.00 0.00 0.00 4.81
155 156 2.192175 CGTACTGCCCATTCCCCC 59.808 66.667 0.00 0.00 0.00 5.40
156 157 2.675242 CGTACTGCCCATTCCCCCA 61.675 63.158 0.00 0.00 0.00 4.96
157 158 1.076995 GTACTGCCCATTCCCCCAC 60.077 63.158 0.00 0.00 0.00 4.61
158 159 2.675242 TACTGCCCATTCCCCCACG 61.675 63.158 0.00 0.00 0.00 4.94
162 163 4.047125 CCCATTCCCCCACGCACT 62.047 66.667 0.00 0.00 0.00 4.40
163 164 2.035626 CCATTCCCCCACGCACTT 59.964 61.111 0.00 0.00 0.00 3.16
164 165 1.606313 CCATTCCCCCACGCACTTT 60.606 57.895 0.00 0.00 0.00 2.66
165 166 1.586028 CATTCCCCCACGCACTTTG 59.414 57.895 0.00 0.00 0.00 2.77
166 167 2.275380 ATTCCCCCACGCACTTTGC 61.275 57.895 0.00 0.00 40.69 3.68
167 168 2.713531 ATTCCCCCACGCACTTTGCT 62.714 55.000 0.00 0.00 42.25 3.91
168 169 3.365265 CCCCCACGCACTTTGCTC 61.365 66.667 0.00 0.00 42.25 4.26
169 170 2.594303 CCCCACGCACTTTGCTCA 60.594 61.111 0.00 0.00 42.25 4.26
170 171 2.192861 CCCCACGCACTTTGCTCAA 61.193 57.895 0.00 0.00 42.25 3.02
171 172 1.008538 CCCACGCACTTTGCTCAAC 60.009 57.895 0.00 0.00 42.25 3.18
172 173 1.369209 CCACGCACTTTGCTCAACG 60.369 57.895 0.00 0.00 42.25 4.10
173 174 1.641140 CACGCACTTTGCTCAACGA 59.359 52.632 0.00 0.00 42.25 3.85
174 175 0.027455 CACGCACTTTGCTCAACGAA 59.973 50.000 0.00 0.00 42.25 3.85
175 176 0.944386 ACGCACTTTGCTCAACGAAT 59.056 45.000 0.00 0.00 42.25 3.34
176 177 1.069906 ACGCACTTTGCTCAACGAATC 60.070 47.619 0.00 0.00 42.25 2.52
177 178 1.195448 CGCACTTTGCTCAACGAATCT 59.805 47.619 0.00 0.00 42.25 2.40
178 179 2.723010 CGCACTTTGCTCAACGAATCTC 60.723 50.000 0.00 0.00 42.25 2.75
179 180 2.481952 GCACTTTGCTCAACGAATCTCT 59.518 45.455 0.00 0.00 40.96 3.10
180 181 3.679980 GCACTTTGCTCAACGAATCTCTA 59.320 43.478 0.00 0.00 40.96 2.43
181 182 4.331168 GCACTTTGCTCAACGAATCTCTAT 59.669 41.667 0.00 0.00 40.96 1.98
182 183 5.163814 GCACTTTGCTCAACGAATCTCTATT 60.164 40.000 0.00 0.00 40.96 1.73
183 184 6.621596 GCACTTTGCTCAACGAATCTCTATTT 60.622 38.462 0.00 0.00 40.96 1.40
184 185 7.301054 CACTTTGCTCAACGAATCTCTATTTT 58.699 34.615 0.00 0.00 0.00 1.82
185 186 7.805071 CACTTTGCTCAACGAATCTCTATTTTT 59.195 33.333 0.00 0.00 0.00 1.94
219 220 2.786777 ACGTAAGGTTCCCATTTCACC 58.213 47.619 0.00 0.00 46.39 4.02
220 221 2.374170 ACGTAAGGTTCCCATTTCACCT 59.626 45.455 0.00 0.00 43.17 4.00
222 223 3.824443 CGTAAGGTTCCCATTTCACCTTT 59.176 43.478 8.08 0.00 46.85 3.11
223 224 4.082949 CGTAAGGTTCCCATTTCACCTTTC 60.083 45.833 8.08 2.95 46.85 2.62
224 225 3.903530 AGGTTCCCATTTCACCTTTCT 57.096 42.857 0.00 0.00 37.70 2.52
225 226 4.199002 AGGTTCCCATTTCACCTTTCTT 57.801 40.909 0.00 0.00 37.70 2.52
226 227 4.556697 AGGTTCCCATTTCACCTTTCTTT 58.443 39.130 0.00 0.00 37.70 2.52
227 228 4.588951 AGGTTCCCATTTCACCTTTCTTTC 59.411 41.667 0.00 0.00 37.70 2.62
228 229 4.262463 GGTTCCCATTTCACCTTTCTTTCC 60.262 45.833 0.00 0.00 0.00 3.13
229 230 4.191804 TCCCATTTCACCTTTCTTTCCA 57.808 40.909 0.00 0.00 0.00 3.53
230 231 4.551671 TCCCATTTCACCTTTCTTTCCAA 58.448 39.130 0.00 0.00 0.00 3.53
231 232 4.343814 TCCCATTTCACCTTTCTTTCCAAC 59.656 41.667 0.00 0.00 0.00 3.77
232 233 4.503123 CCCATTTCACCTTTCTTTCCAACC 60.503 45.833 0.00 0.00 0.00 3.77
233 234 4.344968 CCATTTCACCTTTCTTTCCAACCT 59.655 41.667 0.00 0.00 0.00 3.50
234 235 5.163311 CCATTTCACCTTTCTTTCCAACCTT 60.163 40.000 0.00 0.00 0.00 3.50
235 236 6.348498 CATTTCACCTTTCTTTCCAACCTTT 58.652 36.000 0.00 0.00 0.00 3.11
236 237 5.592104 TTCACCTTTCTTTCCAACCTTTC 57.408 39.130 0.00 0.00 0.00 2.62
237 238 4.605183 TCACCTTTCTTTCCAACCTTTCA 58.395 39.130 0.00 0.00 0.00 2.69
238 239 5.208121 TCACCTTTCTTTCCAACCTTTCAT 58.792 37.500 0.00 0.00 0.00 2.57
239 240 5.068987 TCACCTTTCTTTCCAACCTTTCATG 59.931 40.000 0.00 0.00 0.00 3.07
240 241 4.962362 ACCTTTCTTTCCAACCTTTCATGT 59.038 37.500 0.00 0.00 0.00 3.21
241 242 6.040391 CACCTTTCTTTCCAACCTTTCATGTA 59.960 38.462 0.00 0.00 0.00 2.29
242 243 6.040504 ACCTTTCTTTCCAACCTTTCATGTAC 59.959 38.462 0.00 0.00 0.00 2.90
243 244 6.265422 CCTTTCTTTCCAACCTTTCATGTACT 59.735 38.462 0.00 0.00 0.00 2.73
244 245 6.877611 TTCTTTCCAACCTTTCATGTACTC 57.122 37.500 0.00 0.00 0.00 2.59
245 246 5.313712 TCTTTCCAACCTTTCATGTACTCC 58.686 41.667 0.00 0.00 0.00 3.85
246 247 3.713826 TCCAACCTTTCATGTACTCCC 57.286 47.619 0.00 0.00 0.00 4.30
247 248 3.256704 TCCAACCTTTCATGTACTCCCT 58.743 45.455 0.00 0.00 0.00 4.20
248 249 3.263425 TCCAACCTTTCATGTACTCCCTC 59.737 47.826 0.00 0.00 0.00 4.30
249 250 3.610911 CAACCTTTCATGTACTCCCTCC 58.389 50.000 0.00 0.00 0.00 4.30
250 251 1.831736 ACCTTTCATGTACTCCCTCCG 59.168 52.381 0.00 0.00 0.00 4.63
251 252 1.831736 CCTTTCATGTACTCCCTCCGT 59.168 52.381 0.00 0.00 0.00 4.69
252 253 2.236395 CCTTTCATGTACTCCCTCCGTT 59.764 50.000 0.00 0.00 0.00 4.44
253 254 3.522553 CTTTCATGTACTCCCTCCGTTC 58.477 50.000 0.00 0.00 0.00 3.95
254 255 1.481871 TCATGTACTCCCTCCGTTCC 58.518 55.000 0.00 0.00 0.00 3.62
255 256 1.191535 CATGTACTCCCTCCGTTCCA 58.808 55.000 0.00 0.00 0.00 3.53
256 257 1.553248 CATGTACTCCCTCCGTTCCAA 59.447 52.381 0.00 0.00 0.00 3.53
257 258 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
258 259 2.048601 TGTACTCCCTCCGTTCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
259 260 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
260 261 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
261 262 4.286549 TGTACTCCCTCCGTTCCAAAATAA 59.713 41.667 0.00 0.00 0.00 1.40
262 263 4.376225 ACTCCCTCCGTTCCAAAATAAA 57.624 40.909 0.00 0.00 0.00 1.40
263 264 4.930696 ACTCCCTCCGTTCCAAAATAAAT 58.069 39.130 0.00 0.00 0.00 1.40
264 265 4.705023 ACTCCCTCCGTTCCAAAATAAATG 59.295 41.667 0.00 0.00 0.00 2.32
265 266 4.924625 TCCCTCCGTTCCAAAATAAATGA 58.075 39.130 0.00 0.00 0.00 2.57
266 267 5.515106 TCCCTCCGTTCCAAAATAAATGAT 58.485 37.500 0.00 0.00 0.00 2.45
267 268 5.592688 TCCCTCCGTTCCAAAATAAATGATC 59.407 40.000 0.00 0.00 0.00 2.92
268 269 5.221244 CCCTCCGTTCCAAAATAAATGATCC 60.221 44.000 0.00 0.00 0.00 3.36
269 270 5.359576 CCTCCGTTCCAAAATAAATGATCCA 59.640 40.000 0.00 0.00 0.00 3.41
270 271 6.127479 CCTCCGTTCCAAAATAAATGATCCAA 60.127 38.462 0.00 0.00 0.00 3.53
271 272 6.626302 TCCGTTCCAAAATAAATGATCCAAC 58.374 36.000 0.00 0.00 0.00 3.77
272 273 6.435904 TCCGTTCCAAAATAAATGATCCAACT 59.564 34.615 0.00 0.00 0.00 3.16
273 274 7.039363 TCCGTTCCAAAATAAATGATCCAACTT 60.039 33.333 0.00 0.00 0.00 2.66
274 275 7.602265 CCGTTCCAAAATAAATGATCCAACTTT 59.398 33.333 0.00 0.00 0.00 2.66
275 276 9.632807 CGTTCCAAAATAAATGATCCAACTTTA 57.367 29.630 0.00 0.00 0.00 1.85
346 347 9.856162 TTACTTACCTTCTAAACCAATTTCACT 57.144 29.630 0.00 0.00 0.00 3.41
347 348 8.762481 ACTTACCTTCTAAACCAATTTCACTT 57.238 30.769 0.00 0.00 0.00 3.16
348 349 9.197306 ACTTACCTTCTAAACCAATTTCACTTT 57.803 29.630 0.00 0.00 0.00 2.66
396 397 8.975410 TCATAATATAAGGTAATTCACGGACG 57.025 34.615 0.00 0.00 0.00 4.79
397 398 8.030692 TCATAATATAAGGTAATTCACGGACGG 58.969 37.037 0.00 0.00 0.00 4.79
398 399 6.409524 AATATAAGGTAATTCACGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
399 400 4.741321 ATAAGGTAATTCACGGACGGAA 57.259 40.909 0.00 0.00 0.00 4.30
400 401 3.622166 AAGGTAATTCACGGACGGAAT 57.378 42.857 0.00 0.14 36.57 3.01
401 402 3.622166 AGGTAATTCACGGACGGAATT 57.378 42.857 18.14 18.14 44.65 2.17
402 403 3.946606 AGGTAATTCACGGACGGAATTT 58.053 40.909 18.81 6.22 40.98 1.82
403 404 3.687698 AGGTAATTCACGGACGGAATTTG 59.312 43.478 18.81 1.12 40.98 2.32
404 405 3.685756 GGTAATTCACGGACGGAATTTGA 59.314 43.478 18.81 3.14 40.98 2.69
405 406 4.334481 GGTAATTCACGGACGGAATTTGAT 59.666 41.667 18.81 5.44 40.98 2.57
406 407 4.355543 AATTCACGGACGGAATTTGATG 57.644 40.909 12.25 0.00 40.98 3.07
407 408 2.753055 TCACGGACGGAATTTGATGA 57.247 45.000 0.00 0.00 0.00 2.92
408 409 3.046968 TCACGGACGGAATTTGATGAA 57.953 42.857 0.00 0.00 0.00 2.57
409 410 2.739913 TCACGGACGGAATTTGATGAAC 59.260 45.455 0.00 0.00 0.00 3.18
410 411 2.482336 CACGGACGGAATTTGATGAACA 59.518 45.455 0.00 0.00 0.00 3.18
411 412 3.126858 CACGGACGGAATTTGATGAACAT 59.873 43.478 0.00 0.00 0.00 2.71
412 413 3.756434 ACGGACGGAATTTGATGAACATT 59.244 39.130 0.00 0.00 0.00 2.71
413 414 4.217550 ACGGACGGAATTTGATGAACATTT 59.782 37.500 0.00 0.00 0.00 2.32
414 415 5.413213 ACGGACGGAATTTGATGAACATTTA 59.587 36.000 0.00 0.00 0.00 1.40
415 416 6.094881 ACGGACGGAATTTGATGAACATTTAT 59.905 34.615 0.00 0.00 0.00 1.40
416 417 6.972328 CGGACGGAATTTGATGAACATTTATT 59.028 34.615 0.00 0.00 0.00 1.40
417 418 7.487829 CGGACGGAATTTGATGAACATTTATTT 59.512 33.333 0.00 0.00 0.00 1.40
418 419 9.796120 GGACGGAATTTGATGAACATTTATTTA 57.204 29.630 0.00 0.00 0.00 1.40
459 460 6.834959 AGACAGATAAATCACATGCTAACG 57.165 37.500 0.00 0.00 0.00 3.18
460 461 6.341316 AGACAGATAAATCACATGCTAACGT 58.659 36.000 0.00 0.00 0.00 3.99
461 462 7.489160 AGACAGATAAATCACATGCTAACGTA 58.511 34.615 0.00 0.00 0.00 3.57
462 463 8.144478 AGACAGATAAATCACATGCTAACGTAT 58.856 33.333 0.00 0.00 0.00 3.06
463 464 8.662781 ACAGATAAATCACATGCTAACGTATT 57.337 30.769 0.00 0.00 0.00 1.89
464 465 8.551205 ACAGATAAATCACATGCTAACGTATTG 58.449 33.333 0.00 0.00 0.00 1.90
465 466 8.011673 CAGATAAATCACATGCTAACGTATTGG 58.988 37.037 0.00 0.00 0.00 3.16
466 467 7.931407 AGATAAATCACATGCTAACGTATTGGA 59.069 33.333 0.00 0.00 0.00 3.53
467 468 6.751514 AAATCACATGCTAACGTATTGGAA 57.248 33.333 0.00 0.00 0.00 3.53
468 469 6.942532 AATCACATGCTAACGTATTGGAAT 57.057 33.333 0.00 0.00 0.00 3.01
469 470 8.445275 AAATCACATGCTAACGTATTGGAATA 57.555 30.769 0.00 0.00 0.00 1.75
470 471 8.621532 AATCACATGCTAACGTATTGGAATAT 57.378 30.769 0.00 0.00 0.00 1.28
471 472 8.621532 ATCACATGCTAACGTATTGGAATATT 57.378 30.769 0.00 0.00 0.00 1.28
472 473 8.445275 TCACATGCTAACGTATTGGAATATTT 57.555 30.769 0.00 0.00 0.00 1.40
473 474 9.549078 TCACATGCTAACGTATTGGAATATTTA 57.451 29.630 0.00 0.00 0.00 1.40
484 485 9.650371 CGTATTGGAATATTTATATTCGCATGG 57.350 33.333 13.52 4.84 45.99 3.66
485 486 9.950680 GTATTGGAATATTTATATTCGCATGGG 57.049 33.333 13.52 2.76 45.99 4.00
486 487 6.449635 TGGAATATTTATATTCGCATGGGC 57.550 37.500 4.59 2.74 45.99 5.36
487 488 5.948758 TGGAATATTTATATTCGCATGGGCA 59.051 36.000 4.59 0.00 45.99 5.36
488 489 6.606796 TGGAATATTTATATTCGCATGGGCAT 59.393 34.615 4.59 2.12 45.99 4.40
489 490 7.123997 TGGAATATTTATATTCGCATGGGCATT 59.876 33.333 4.59 0.00 45.99 3.56
490 491 7.436080 GGAATATTTATATTCGCATGGGCATTG 59.564 37.037 4.59 0.00 45.99 2.82
491 492 5.726980 ATTTATATTCGCATGGGCATTGT 57.273 34.783 4.59 0.00 41.24 2.71
492 493 5.528043 TTTATATTCGCATGGGCATTGTT 57.472 34.783 4.59 0.00 41.24 2.83
493 494 3.648339 ATATTCGCATGGGCATTGTTC 57.352 42.857 4.59 0.00 41.24 3.18
494 495 1.477553 ATTCGCATGGGCATTGTTCT 58.522 45.000 4.59 0.00 41.24 3.01
495 496 2.121291 TTCGCATGGGCATTGTTCTA 57.879 45.000 4.59 0.00 41.24 2.10
496 497 2.346766 TCGCATGGGCATTGTTCTAT 57.653 45.000 4.59 0.00 41.24 1.98
497 498 2.653726 TCGCATGGGCATTGTTCTATT 58.346 42.857 4.59 0.00 41.24 1.73
498 499 3.814625 TCGCATGGGCATTGTTCTATTA 58.185 40.909 4.59 0.00 41.24 0.98
499 500 4.203226 TCGCATGGGCATTGTTCTATTAA 58.797 39.130 4.59 0.00 41.24 1.40
500 501 4.642437 TCGCATGGGCATTGTTCTATTAAA 59.358 37.500 4.59 0.00 41.24 1.52
501 502 5.126222 TCGCATGGGCATTGTTCTATTAAAA 59.874 36.000 4.59 0.00 41.24 1.52
502 503 5.809562 CGCATGGGCATTGTTCTATTAAAAA 59.190 36.000 0.00 0.00 41.24 1.94
503 504 6.479660 CGCATGGGCATTGTTCTATTAAAAAT 59.520 34.615 0.00 0.00 41.24 1.82
504 505 7.651304 CGCATGGGCATTGTTCTATTAAAAATA 59.349 33.333 0.00 0.00 41.24 1.40
505 506 9.323985 GCATGGGCATTGTTCTATTAAAAATAA 57.676 29.630 0.00 0.00 40.72 1.40
548 551 0.659957 GTGCCTTGATCATCGCCTTC 59.340 55.000 10.97 0.88 0.00 3.46
632 635 2.297129 GCCTCCTGTCTGGCTCCTT 61.297 63.158 0.00 0.00 45.26 3.36
636 639 1.920325 CCTGTCTGGCTCCTTCCCA 60.920 63.158 0.00 0.00 0.00 4.37
687 690 1.403514 CGTCACCTTCTCTGCTTCTCC 60.404 57.143 0.00 0.00 0.00 3.71
695 698 4.479993 CTGCTTCTCCCCAGCCGG 62.480 72.222 0.00 0.00 36.33 6.13
726 737 2.227968 GAAACGTAGTGCGCTGCCTG 62.228 60.000 10.80 0.00 45.00 4.85
823 839 6.989759 AGCCAAATTGTCGGTTTTCTAATTTT 59.010 30.769 0.00 0.00 30.88 1.82
907 923 5.904362 TCTTCGGTTTCTACCTACCTAAC 57.096 43.478 0.00 0.00 42.66 2.34
908 924 4.396166 TCTTCGGTTTCTACCTACCTAACG 59.604 45.833 0.00 0.00 42.66 3.18
909 925 2.423538 TCGGTTTCTACCTACCTAACGC 59.576 50.000 0.00 0.00 42.66 4.84
912 928 2.497273 GTTTCTACCTACCTAACGCCCA 59.503 50.000 0.00 0.00 0.00 5.36
913 929 2.062971 TCTACCTACCTAACGCCCAG 57.937 55.000 0.00 0.00 0.00 4.45
917 934 3.085296 TACCTAACGCCCAGGCCC 61.085 66.667 0.00 0.00 36.57 5.80
962 979 3.474570 CGGAGGAGGAGGGCCAAG 61.475 72.222 6.18 0.00 36.29 3.61
963 980 2.041265 GGAGGAGGAGGGCCAAGA 59.959 66.667 6.18 0.00 36.29 3.02
964 981 1.385206 GGAGGAGGAGGGCCAAGAT 60.385 63.158 6.18 0.00 36.29 2.40
965 982 0.104934 GGAGGAGGAGGGCCAAGATA 60.105 60.000 6.18 0.00 36.29 1.98
966 983 1.695989 GGAGGAGGAGGGCCAAGATAA 60.696 57.143 6.18 0.00 36.29 1.75
967 984 2.127708 GAGGAGGAGGGCCAAGATAAA 58.872 52.381 6.18 0.00 36.29 1.40
992 1009 0.865769 CCGAATCCGAATAAAGCCGG 59.134 55.000 0.00 0.00 46.57 6.13
1105 1125 1.609794 GTCCGAGTCCACCCTCCTT 60.610 63.158 0.00 0.00 0.00 3.36
1133 1153 4.719369 GAACACGAGGGCGAGCGT 62.719 66.667 0.00 0.00 42.11 5.07
1252 1272 0.879765 CAGGTTTGCTCCTTCTGCTG 59.120 55.000 0.00 0.00 35.37 4.41
1253 1273 0.892814 AGGTTTGCTCCTTCTGCTGC 60.893 55.000 0.00 0.00 33.52 5.25
1254 1274 0.892814 GGTTTGCTCCTTCTGCTGCT 60.893 55.000 0.00 0.00 0.00 4.24
1295 1315 2.489329 GTGCAATGCCTCAAAGAGCTTA 59.511 45.455 1.53 0.00 0.00 3.09
1325 1347 1.746220 GGTGGCTGTGTGTTTGTTGTA 59.254 47.619 0.00 0.00 0.00 2.41
1332 1354 4.498009 GCTGTGTGTTTGTTGTATGCTCTT 60.498 41.667 0.00 0.00 0.00 2.85
1393 1415 1.125711 ACCTGAAGCCACCGGTTACT 61.126 55.000 2.97 1.20 0.00 2.24
1492 1514 1.810532 GCTCTACCTCACGGACAGG 59.189 63.158 0.00 0.00 37.03 4.00
1594 1625 4.256920 GTGTACTTCATGGTTGCATCTCT 58.743 43.478 0.00 0.00 0.00 3.10
1635 1666 2.231478 TCTGTCTCCCAACTAGCGAAAG 59.769 50.000 0.00 0.00 0.00 2.62
1658 1689 7.208064 AGACCAAATTTATAGTCAGCCCTAA 57.792 36.000 14.23 0.00 0.00 2.69
1685 1716 5.512753 TGTTAGTGTTGATGTGCATTTGT 57.487 34.783 0.00 0.00 0.00 2.83
1687 1718 5.163571 TGTTAGTGTTGATGTGCATTTGTGT 60.164 36.000 0.00 0.00 0.00 3.72
1701 1732 6.142798 GTGCATTTGTGTGATGAGTTTGTTAG 59.857 38.462 0.00 0.00 0.00 2.34
1710 1741 5.853282 GTGATGAGTTTGTTAGCACATTGTC 59.147 40.000 0.00 0.00 31.06 3.18
2069 2125 3.055819 TCATCTGCCAAGTTGGTCTCTAC 60.056 47.826 22.85 5.92 40.46 2.59
2078 2134 6.293462 GCCAAGTTGGTCTCTACTTTTACTTG 60.293 42.308 22.85 0.00 40.46 3.16
2080 2136 7.041984 CCAAGTTGGTCTCTACTTTTACTTGAC 60.042 40.741 14.21 0.00 42.15 3.18
2143 2199 8.194769 ACCGAACTTATCAAAAAGATGTTTGTT 58.805 29.630 0.00 0.00 39.16 2.83
2326 2383 6.172630 ACAAAAACTTCCACAGCTGAAAATT 58.827 32.000 23.35 4.96 0.00 1.82
2394 2451 3.441222 TCATGCAAAGAAGGTATGTGCTG 59.559 43.478 0.00 0.00 36.18 4.41
2397 2454 3.636300 TGCAAAGAAGGTATGTGCTGTTT 59.364 39.130 0.00 0.00 36.18 2.83
2428 2485 7.302948 ACCCTTAATACTTCTGTTTTCCCTTT 58.697 34.615 0.00 0.00 0.00 3.11
2486 2546 1.159713 TTGCTGCAACAGTGACTCCG 61.160 55.000 11.69 0.00 33.43 4.63
2613 2673 1.771854 TCTTGTGTCCCTAAGCCACAA 59.228 47.619 0.00 0.00 44.36 3.33
2623 2684 3.386402 CCCTAAGCCACAAAAGTTTCCAA 59.614 43.478 0.00 0.00 0.00 3.53
2633 2694 6.149474 CCACAAAAGTTTCCAATCTCGTATCT 59.851 38.462 0.00 0.00 0.00 1.98
2636 2697 8.311836 ACAAAAGTTTCCAATCTCGTATCTCTA 58.688 33.333 0.00 0.00 0.00 2.43
2652 2713 8.873830 TCGTATCTCTAATTCTGCTTTTTCAAG 58.126 33.333 0.00 0.00 0.00 3.02
2658 2719 7.132213 TCTAATTCTGCTTTTTCAAGAACACG 58.868 34.615 0.00 0.00 30.57 4.49
2754 2815 2.485814 GACTTGGACATTCCTTCAGCAC 59.514 50.000 0.00 0.00 37.46 4.40
2839 2901 9.639563 TGATAATTATATTCAGTTCTTGCCCAA 57.360 29.630 0.00 0.00 0.00 4.12
2844 2906 3.731652 TTCAGTTCTTGCCCAACATTG 57.268 42.857 0.00 0.00 0.00 2.82
2859 2921 6.293845 GCCCAACATTGCAATTTTGAATACAA 60.294 34.615 30.66 0.00 29.75 2.41
2902 2972 7.693952 TCGTTGCATTCTTTTATTATCACCTC 58.306 34.615 0.00 0.00 0.00 3.85
3094 3164 0.465460 TGCTCCCCATGATAAACGGC 60.465 55.000 0.00 0.00 0.00 5.68
3207 3283 5.798125 TCTCTCTCTCTCTCTCTCTCATC 57.202 47.826 0.00 0.00 0.00 2.92
3223 3299 6.333416 TCTCTCATCGGAGTTCAGTATTTTG 58.667 40.000 0.00 0.00 42.05 2.44
3236 3312 5.575157 TCAGTATTTTGTTTGGCCTGGATA 58.425 37.500 3.32 0.00 0.00 2.59
3237 3313 6.194235 TCAGTATTTTGTTTGGCCTGGATAT 58.806 36.000 3.32 0.00 0.00 1.63
3238 3314 6.321181 TCAGTATTTTGTTTGGCCTGGATATC 59.679 38.462 3.32 0.00 0.00 1.63
3242 3318 6.524101 TTTTGTTTGGCCTGGATATCTTAC 57.476 37.500 3.32 0.00 0.00 2.34
3295 3371 7.829211 TGACTTTAGCTACAAAAAGCCTATCAT 59.171 33.333 6.61 0.00 43.86 2.45
3321 3397 2.457366 ACGGGCAAAGAACTACTCTG 57.543 50.000 0.00 0.00 33.37 3.35
3324 3400 2.288825 CGGGCAAAGAACTACTCTGTCA 60.289 50.000 0.00 0.00 33.37 3.58
3337 3413 5.641209 ACTACTCTGTCAGACATGAAAATGC 59.359 40.000 2.97 0.00 37.14 3.56
3340 3416 6.233434 ACTCTGTCAGACATGAAAATGCTAA 58.767 36.000 2.97 0.00 37.14 3.09
3341 3417 6.712095 ACTCTGTCAGACATGAAAATGCTAAA 59.288 34.615 2.97 0.00 37.14 1.85
3485 3561 4.651503 TCAAAGACTGTTCTGAGAAGGAGT 59.348 41.667 6.53 6.53 29.98 3.85
3524 3600 1.820519 ACTTATGCGTACGGTTCAGGA 59.179 47.619 18.39 0.00 0.00 3.86
3581 3657 4.918201 CTTCCGCCCGATCAGCCC 62.918 72.222 0.00 0.00 0.00 5.19
3678 3756 1.317613 AGAATGCGCCTGACAAACAA 58.682 45.000 4.18 0.00 0.00 2.83
3837 3915 3.689649 GGATTGCACTAAAACCTCGTCAT 59.310 43.478 0.00 0.00 0.00 3.06
3843 3921 6.869695 TGCACTAAAACCTCGTCATAAGATA 58.130 36.000 0.00 0.00 0.00 1.98
3871 3949 4.691216 GGTACAAGCTATATGCAGGTAAGC 59.309 45.833 0.00 0.00 45.94 3.09
3877 3955 4.707448 AGCTATATGCAGGTAAGCGATACT 59.293 41.667 0.00 0.00 45.94 2.12
3878 3956 5.886474 AGCTATATGCAGGTAAGCGATACTA 59.114 40.000 0.00 0.00 45.94 1.82
3945 4024 3.129502 CAGCCACAGCCATCCGTG 61.130 66.667 0.00 0.00 41.25 4.94
4014 4157 3.374058 GGTGCTCATATTACACACACCAC 59.626 47.826 0.00 0.00 44.32 4.16
4023 4166 2.503920 ACACACACCACTACGAGAAC 57.496 50.000 0.00 0.00 0.00 3.01
4026 4169 2.794910 CACACACCACTACGAGAACAAG 59.205 50.000 0.00 0.00 0.00 3.16
4048 4244 3.832490 GGAATTTAGCCAGTTCCTTGGTT 59.168 43.478 1.56 0.00 40.49 3.67
4054 4250 3.081804 AGCCAGTTCCTTGGTTTATTCG 58.918 45.455 0.00 0.00 40.49 3.34
4067 4263 5.475719 TGGTTTATTCGTCGTCTCTTTCAT 58.524 37.500 0.00 0.00 0.00 2.57
4068 4264 5.929992 TGGTTTATTCGTCGTCTCTTTCATT 59.070 36.000 0.00 0.00 0.00 2.57
4069 4265 6.090358 TGGTTTATTCGTCGTCTCTTTCATTC 59.910 38.462 0.00 0.00 0.00 2.67
4070 4266 6.455246 GGTTTATTCGTCGTCTCTTTCATTCC 60.455 42.308 0.00 0.00 0.00 3.01
4071 4267 3.936372 TTCGTCGTCTCTTTCATTCCT 57.064 42.857 0.00 0.00 0.00 3.36
4072 4268 3.936372 TCGTCGTCTCTTTCATTCCTT 57.064 42.857 0.00 0.00 0.00 3.36
4073 4269 4.252971 TCGTCGTCTCTTTCATTCCTTT 57.747 40.909 0.00 0.00 0.00 3.11
4074 4270 4.628074 TCGTCGTCTCTTTCATTCCTTTT 58.372 39.130 0.00 0.00 0.00 2.27
4075 4271 5.054477 TCGTCGTCTCTTTCATTCCTTTTT 58.946 37.500 0.00 0.00 0.00 1.94
4097 4293 3.878160 TTTCTTTTCTTTTGCGGGTGT 57.122 38.095 0.00 0.00 0.00 4.16
4098 4294 3.430333 TTCTTTTCTTTTGCGGGTGTC 57.570 42.857 0.00 0.00 0.00 3.67
4099 4295 2.650322 TCTTTTCTTTTGCGGGTGTCT 58.350 42.857 0.00 0.00 0.00 3.41
4100 4296 2.616842 TCTTTTCTTTTGCGGGTGTCTC 59.383 45.455 0.00 0.00 0.00 3.36
4101 4297 2.341846 TTTCTTTTGCGGGTGTCTCT 57.658 45.000 0.00 0.00 0.00 3.10
4102 4298 2.341846 TTCTTTTGCGGGTGTCTCTT 57.658 45.000 0.00 0.00 0.00 2.85
4103 4299 2.341846 TCTTTTGCGGGTGTCTCTTT 57.658 45.000 0.00 0.00 0.00 2.52
4104 4300 2.218603 TCTTTTGCGGGTGTCTCTTTC 58.781 47.619 0.00 0.00 0.00 2.62
4105 4301 1.946768 CTTTTGCGGGTGTCTCTTTCA 59.053 47.619 0.00 0.00 0.00 2.69
4116 4312 2.978978 TGTCTCTTTCATTCCACCCTGA 59.021 45.455 0.00 0.00 0.00 3.86
4145 4341 2.209872 CGTGTTGTTCGCGTGTAGT 58.790 52.632 5.77 0.00 43.87 2.73
4146 4342 0.111878 CGTGTTGTTCGCGTGTAGTG 60.112 55.000 5.77 0.00 43.87 2.74
4147 4343 1.202203 GTGTTGTTCGCGTGTAGTGA 58.798 50.000 5.77 0.00 37.63 3.41
4148 4344 1.790623 GTGTTGTTCGCGTGTAGTGAT 59.209 47.619 5.77 0.00 39.39 3.06
4149 4345 2.981805 GTGTTGTTCGCGTGTAGTGATA 59.018 45.455 5.77 0.00 39.39 2.15
4150 4346 3.426191 GTGTTGTTCGCGTGTAGTGATAA 59.574 43.478 5.77 0.00 39.39 1.75
4151 4347 4.090930 GTGTTGTTCGCGTGTAGTGATAAT 59.909 41.667 5.77 0.00 39.39 1.28
4152 4348 4.687018 TGTTGTTCGCGTGTAGTGATAATT 59.313 37.500 5.77 0.00 39.39 1.40
4153 4349 5.164031 TGTTGTTCGCGTGTAGTGATAATTC 60.164 40.000 5.77 0.00 39.39 2.17
4154 4350 4.487019 TGTTCGCGTGTAGTGATAATTCA 58.513 39.130 5.77 0.00 39.39 2.57
4155 4351 4.924462 TGTTCGCGTGTAGTGATAATTCAA 59.076 37.500 5.77 0.00 39.39 2.69
4156 4352 5.061684 TGTTCGCGTGTAGTGATAATTCAAG 59.938 40.000 5.77 0.00 39.39 3.02
4157 4353 4.989044 TCGCGTGTAGTGATAATTCAAGA 58.011 39.130 5.77 0.00 33.87 3.02
4158 4354 5.588240 TCGCGTGTAGTGATAATTCAAGAT 58.412 37.500 5.77 0.00 33.87 2.40
4159 4355 6.731164 TCGCGTGTAGTGATAATTCAAGATA 58.269 36.000 5.77 0.00 33.87 1.98
4160 4356 6.856426 TCGCGTGTAGTGATAATTCAAGATAG 59.144 38.462 5.77 0.00 33.87 2.08
4161 4357 6.637254 CGCGTGTAGTGATAATTCAAGATAGT 59.363 38.462 0.00 0.00 32.48 2.12
4162 4358 7.801783 CGCGTGTAGTGATAATTCAAGATAGTA 59.198 37.037 0.00 0.00 32.48 1.82
4163 4359 8.903723 GCGTGTAGTGATAATTCAAGATAGTAC 58.096 37.037 0.00 0.00 32.48 2.73
4190 4386 8.592809 TGTATTCCTTTTTGCAGGTGATAATTT 58.407 29.630 0.00 0.00 35.15 1.82
4197 4393 8.810652 TTTTTGCAGGTGATAATTTAAGACAC 57.189 30.769 0.00 0.00 0.00 3.67
4332 4528 7.981102 AAGATGTTCTACAGTAACCCTTTTC 57.019 36.000 0.00 0.00 0.00 2.29
4334 4530 8.431910 AGATGTTCTACAGTAACCCTTTTCTA 57.568 34.615 0.00 0.00 0.00 2.10
4335 4531 8.877195 AGATGTTCTACAGTAACCCTTTTCTAA 58.123 33.333 0.00 0.00 0.00 2.10
4336 4532 9.498176 GATGTTCTACAGTAACCCTTTTCTAAA 57.502 33.333 0.00 0.00 0.00 1.85
4386 4593 5.061311 GTGCTTGTTCATTCATTTCAATCCG 59.939 40.000 0.00 0.00 0.00 4.18
4388 4595 5.287035 GCTTGTTCATTCATTTCAATCCGAC 59.713 40.000 0.00 0.00 0.00 4.79
4389 4596 5.309323 TGTTCATTCATTTCAATCCGACC 57.691 39.130 0.00 0.00 0.00 4.79
4393 4600 5.179533 TCATTCATTTCAATCCGACCGTAA 58.820 37.500 0.00 0.00 0.00 3.18
4400 4607 7.811236 TCATTTCAATCCGACCGTAATCTATAC 59.189 37.037 0.00 0.00 0.00 1.47
4479 4689 5.567138 AATAAAAACCTCATCCGAAGCAG 57.433 39.130 0.00 0.00 0.00 4.24
4480 4690 2.859165 AAAACCTCATCCGAAGCAGA 57.141 45.000 0.00 0.00 0.00 4.26
4481 4691 3.356529 AAAACCTCATCCGAAGCAGAT 57.643 42.857 0.00 0.00 0.00 2.90
4482 4692 4.487714 AAAACCTCATCCGAAGCAGATA 57.512 40.909 0.00 0.00 0.00 1.98
4483 4693 4.696479 AAACCTCATCCGAAGCAGATAT 57.304 40.909 0.00 0.00 0.00 1.63
4505 4720 3.988976 ACCTGCTGAATTCTCTGCTAA 57.011 42.857 7.05 0.00 44.53 3.09
4516 4731 7.441836 TGAATTCTCTGCTAACTACTTTGTCA 58.558 34.615 7.05 0.00 0.00 3.58
4544 4759 3.240134 ATCACCACCGCTCGTGCTT 62.240 57.895 7.97 0.00 41.53 3.91
4551 4769 2.307309 CCGCTCGTGCTTTCGTCAA 61.307 57.895 7.97 0.00 36.97 3.18
4589 4807 0.170561 CGTCCTCGTCGTCTTGGATT 59.829 55.000 0.00 0.00 0.00 3.01
4590 4808 1.630148 GTCCTCGTCGTCTTGGATTG 58.370 55.000 0.00 0.00 0.00 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 7.818930 CCCAAGCATATAAACAGTGACATTTTT 59.181 33.333 0.00 0.00 0.00 1.94
13 14 7.322664 CCCAAGCATATAAACAGTGACATTTT 58.677 34.615 0.00 0.00 0.00 1.82
14 15 6.127366 CCCCAAGCATATAAACAGTGACATTT 60.127 38.462 0.00 0.00 0.00 2.32
15 16 5.360714 CCCCAAGCATATAAACAGTGACATT 59.639 40.000 0.00 0.00 0.00 2.71
16 17 4.889409 CCCCAAGCATATAAACAGTGACAT 59.111 41.667 0.00 0.00 0.00 3.06
17 18 4.018870 TCCCCAAGCATATAAACAGTGACA 60.019 41.667 0.00 0.00 0.00 3.58
18 19 4.523083 TCCCCAAGCATATAAACAGTGAC 58.477 43.478 0.00 0.00 0.00 3.67
19 20 4.853468 TCCCCAAGCATATAAACAGTGA 57.147 40.909 0.00 0.00 0.00 3.41
20 21 4.279169 CCATCCCCAAGCATATAAACAGTG 59.721 45.833 0.00 0.00 0.00 3.66
21 22 4.473444 CCATCCCCAAGCATATAAACAGT 58.527 43.478 0.00 0.00 0.00 3.55
22 23 3.828451 CCCATCCCCAAGCATATAAACAG 59.172 47.826 0.00 0.00 0.00 3.16
23 24 3.843422 CCCATCCCCAAGCATATAAACA 58.157 45.455 0.00 0.00 0.00 2.83
24 25 2.562738 GCCCATCCCCAAGCATATAAAC 59.437 50.000 0.00 0.00 0.00 2.01
25 26 2.450500 AGCCCATCCCCAAGCATATAAA 59.549 45.455 0.00 0.00 0.00 1.40
26 27 2.041620 GAGCCCATCCCCAAGCATATAA 59.958 50.000 0.00 0.00 0.00 0.98
27 28 1.635487 GAGCCCATCCCCAAGCATATA 59.365 52.381 0.00 0.00 0.00 0.86
28 29 0.407139 GAGCCCATCCCCAAGCATAT 59.593 55.000 0.00 0.00 0.00 1.78
29 30 1.846261 GAGCCCATCCCCAAGCATA 59.154 57.895 0.00 0.00 0.00 3.14
30 31 2.605299 GAGCCCATCCCCAAGCAT 59.395 61.111 0.00 0.00 0.00 3.79
31 32 4.113815 CGAGCCCATCCCCAAGCA 62.114 66.667 0.00 0.00 0.00 3.91
32 33 4.883354 CCGAGCCCATCCCCAAGC 62.883 72.222 0.00 0.00 0.00 4.01
33 34 4.195334 CCCGAGCCCATCCCCAAG 62.195 72.222 0.00 0.00 0.00 3.61
37 38 4.883354 CAAGCCCGAGCCCATCCC 62.883 72.222 0.00 0.00 41.25 3.85
38 39 4.883354 CCAAGCCCGAGCCCATCC 62.883 72.222 0.00 0.00 41.25 3.51
39 40 4.883354 CCCAAGCCCGAGCCCATC 62.883 72.222 0.00 0.00 41.25 3.51
42 43 3.662117 AAATCCCAAGCCCGAGCCC 62.662 63.158 0.00 0.00 41.25 5.19
43 44 1.257750 AAAAATCCCAAGCCCGAGCC 61.258 55.000 0.00 0.00 41.25 4.70
44 45 2.276869 AAAAATCCCAAGCCCGAGC 58.723 52.632 0.00 0.00 40.32 5.03
82 83 1.302832 GATCATAAGCCGGGCCAGG 60.303 63.158 18.94 18.94 0.00 4.45
83 84 1.669115 CGATCATAAGCCGGGCCAG 60.669 63.158 17.02 0.00 0.00 4.85
84 85 2.425592 CGATCATAAGCCGGGCCA 59.574 61.111 17.02 4.07 0.00 5.36
85 86 2.358737 CCGATCATAAGCCGGGCC 60.359 66.667 17.02 0.00 39.59 5.80
88 89 1.067776 GTAGACCCGATCATAAGCCGG 60.068 57.143 0.00 0.00 42.64 6.13
89 90 1.611977 TGTAGACCCGATCATAAGCCG 59.388 52.381 0.00 0.00 0.00 5.52
90 91 3.391049 GTTGTAGACCCGATCATAAGCC 58.609 50.000 0.00 0.00 0.00 4.35
91 92 3.391049 GGTTGTAGACCCGATCATAAGC 58.609 50.000 0.00 0.00 43.06 3.09
103 104 0.533308 TGTTGCGGTGGGTTGTAGAC 60.533 55.000 0.00 0.00 0.00 2.59
104 105 0.250124 CTGTTGCGGTGGGTTGTAGA 60.250 55.000 0.00 0.00 0.00 2.59
105 106 1.852067 GCTGTTGCGGTGGGTTGTAG 61.852 60.000 0.00 0.00 0.00 2.74
106 107 1.894756 GCTGTTGCGGTGGGTTGTA 60.895 57.895 0.00 0.00 0.00 2.41
107 108 3.216292 GCTGTTGCGGTGGGTTGT 61.216 61.111 0.00 0.00 0.00 3.32
108 109 3.977244 GGCTGTTGCGGTGGGTTG 61.977 66.667 0.00 0.00 40.82 3.77
124 125 3.884350 TACGAGTAGCTGCGGCGG 61.884 66.667 12.87 3.95 44.37 6.13
125 126 2.651232 GTACGAGTAGCTGCGGCG 60.651 66.667 12.87 15.82 44.37 6.46
126 127 1.586564 CAGTACGAGTAGCTGCGGC 60.587 63.158 10.33 10.33 39.06 6.53
127 128 1.586564 GCAGTACGAGTAGCTGCGG 60.587 63.158 16.03 0.00 44.64 5.69
128 129 3.984241 GCAGTACGAGTAGCTGCG 58.016 61.111 16.03 0.00 44.64 5.18
130 131 0.747255 ATGGGCAGTACGAGTAGCTG 59.253 55.000 0.00 7.82 0.00 4.24
131 132 1.409427 GAATGGGCAGTACGAGTAGCT 59.591 52.381 0.00 0.00 0.00 3.32
132 133 1.538419 GGAATGGGCAGTACGAGTAGC 60.538 57.143 0.00 0.00 0.00 3.58
133 134 1.068741 GGGAATGGGCAGTACGAGTAG 59.931 57.143 0.00 0.00 0.00 2.57
134 135 1.117150 GGGAATGGGCAGTACGAGTA 58.883 55.000 0.00 0.00 0.00 2.59
135 136 1.623542 GGGGAATGGGCAGTACGAGT 61.624 60.000 0.00 0.00 0.00 4.18
136 137 1.146263 GGGGAATGGGCAGTACGAG 59.854 63.158 0.00 0.00 0.00 4.18
137 138 2.372074 GGGGGAATGGGCAGTACGA 61.372 63.158 0.00 0.00 0.00 3.43
138 139 2.192175 GGGGGAATGGGCAGTACG 59.808 66.667 0.00 0.00 0.00 3.67
139 140 1.076995 GTGGGGGAATGGGCAGTAC 60.077 63.158 0.00 0.00 0.00 2.73
140 141 2.675242 CGTGGGGGAATGGGCAGTA 61.675 63.158 0.00 0.00 0.00 2.74
141 142 4.047125 CGTGGGGGAATGGGCAGT 62.047 66.667 0.00 0.00 0.00 4.40
145 146 3.583882 AAGTGCGTGGGGGAATGGG 62.584 63.158 0.00 0.00 0.00 4.00
146 147 1.606313 AAAGTGCGTGGGGGAATGG 60.606 57.895 0.00 0.00 0.00 3.16
147 148 1.586028 CAAAGTGCGTGGGGGAATG 59.414 57.895 0.00 0.00 0.00 2.67
148 149 2.275380 GCAAAGTGCGTGGGGGAAT 61.275 57.895 0.00 0.00 31.71 3.01
149 150 2.909965 GCAAAGTGCGTGGGGGAA 60.910 61.111 0.00 0.00 31.71 3.97
158 159 2.481952 AGAGATTCGTTGAGCAAAGTGC 59.518 45.455 0.00 0.00 45.46 4.40
159 160 6.414408 AATAGAGATTCGTTGAGCAAAGTG 57.586 37.500 0.00 0.00 0.00 3.16
160 161 7.440523 AAAATAGAGATTCGTTGAGCAAAGT 57.559 32.000 0.00 0.00 0.00 2.66
206 207 4.343814 TGGAAAGAAAGGTGAAATGGGAAC 59.656 41.667 0.00 0.00 0.00 3.62
207 208 4.551671 TGGAAAGAAAGGTGAAATGGGAA 58.448 39.130 0.00 0.00 0.00 3.97
208 209 4.191804 TGGAAAGAAAGGTGAAATGGGA 57.808 40.909 0.00 0.00 0.00 4.37
209 210 4.503123 GGTTGGAAAGAAAGGTGAAATGGG 60.503 45.833 0.00 0.00 0.00 4.00
210 211 4.344968 AGGTTGGAAAGAAAGGTGAAATGG 59.655 41.667 0.00 0.00 0.00 3.16
211 212 5.535753 AGGTTGGAAAGAAAGGTGAAATG 57.464 39.130 0.00 0.00 0.00 2.32
212 213 6.156083 TGAAAGGTTGGAAAGAAAGGTGAAAT 59.844 34.615 0.00 0.00 0.00 2.17
213 214 5.482175 TGAAAGGTTGGAAAGAAAGGTGAAA 59.518 36.000 0.00 0.00 0.00 2.69
214 215 5.020132 TGAAAGGTTGGAAAGAAAGGTGAA 58.980 37.500 0.00 0.00 0.00 3.18
215 216 4.605183 TGAAAGGTTGGAAAGAAAGGTGA 58.395 39.130 0.00 0.00 0.00 4.02
216 217 5.163416 ACATGAAAGGTTGGAAAGAAAGGTG 60.163 40.000 0.00 0.00 0.00 4.00
217 218 4.962362 ACATGAAAGGTTGGAAAGAAAGGT 59.038 37.500 0.00 0.00 0.00 3.50
218 219 5.535753 ACATGAAAGGTTGGAAAGAAAGG 57.464 39.130 0.00 0.00 0.00 3.11
219 220 7.277174 AGTACATGAAAGGTTGGAAAGAAAG 57.723 36.000 0.00 0.00 28.09 2.62
220 221 6.264518 GGAGTACATGAAAGGTTGGAAAGAAA 59.735 38.462 0.00 0.00 28.09 2.52
221 222 5.768164 GGAGTACATGAAAGGTTGGAAAGAA 59.232 40.000 0.00 0.00 28.09 2.52
222 223 5.313712 GGAGTACATGAAAGGTTGGAAAGA 58.686 41.667 0.00 0.00 28.09 2.52
223 224 4.459337 GGGAGTACATGAAAGGTTGGAAAG 59.541 45.833 0.00 0.00 28.09 2.62
224 225 4.105697 AGGGAGTACATGAAAGGTTGGAAA 59.894 41.667 0.00 0.00 28.09 3.13
225 226 3.655777 AGGGAGTACATGAAAGGTTGGAA 59.344 43.478 0.00 0.00 28.09 3.53
226 227 3.256704 AGGGAGTACATGAAAGGTTGGA 58.743 45.455 0.00 0.00 28.09 3.53
227 228 3.610911 GAGGGAGTACATGAAAGGTTGG 58.389 50.000 0.00 0.00 28.09 3.77
228 229 3.610911 GGAGGGAGTACATGAAAGGTTG 58.389 50.000 0.00 0.00 28.09 3.77
229 230 2.236395 CGGAGGGAGTACATGAAAGGTT 59.764 50.000 0.00 0.00 28.09 3.50
230 231 1.831736 CGGAGGGAGTACATGAAAGGT 59.168 52.381 0.00 0.00 32.53 3.50
231 232 1.831736 ACGGAGGGAGTACATGAAAGG 59.168 52.381 0.00 0.00 0.00 3.11
232 233 3.522553 GAACGGAGGGAGTACATGAAAG 58.477 50.000 0.00 0.00 0.00 2.62
233 234 2.235402 GGAACGGAGGGAGTACATGAAA 59.765 50.000 0.00 0.00 0.00 2.69
234 235 1.829222 GGAACGGAGGGAGTACATGAA 59.171 52.381 0.00 0.00 0.00 2.57
235 236 1.272816 TGGAACGGAGGGAGTACATGA 60.273 52.381 0.00 0.00 0.00 3.07
236 237 1.191535 TGGAACGGAGGGAGTACATG 58.808 55.000 0.00 0.00 0.00 3.21
237 238 1.946984 TTGGAACGGAGGGAGTACAT 58.053 50.000 0.00 0.00 0.00 2.29
238 239 1.719529 TTTGGAACGGAGGGAGTACA 58.280 50.000 0.00 0.00 0.00 2.90
239 240 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
240 241 5.502089 TTTATTTTGGAACGGAGGGAGTA 57.498 39.130 0.00 0.00 0.00 2.59
241 242 4.376225 TTTATTTTGGAACGGAGGGAGT 57.624 40.909 0.00 0.00 0.00 3.85
242 243 4.947388 TCATTTATTTTGGAACGGAGGGAG 59.053 41.667 0.00 0.00 0.00 4.30
243 244 4.924625 TCATTTATTTTGGAACGGAGGGA 58.075 39.130 0.00 0.00 0.00 4.20
244 245 5.221244 GGATCATTTATTTTGGAACGGAGGG 60.221 44.000 0.00 0.00 0.00 4.30
245 246 5.359576 TGGATCATTTATTTTGGAACGGAGG 59.640 40.000 0.00 0.00 0.00 4.30
246 247 6.449635 TGGATCATTTATTTTGGAACGGAG 57.550 37.500 0.00 0.00 0.00 4.63
247 248 6.435904 AGTTGGATCATTTATTTTGGAACGGA 59.564 34.615 0.00 0.00 0.00 4.69
248 249 6.630071 AGTTGGATCATTTATTTTGGAACGG 58.370 36.000 0.00 0.00 0.00 4.44
249 250 8.532977 AAAGTTGGATCATTTATTTTGGAACG 57.467 30.769 0.00 0.00 0.00 3.95
320 321 9.856162 AGTGAAATTGGTTTAGAAGGTAAGTAA 57.144 29.630 0.00 0.00 0.00 2.24
321 322 9.856162 AAGTGAAATTGGTTTAGAAGGTAAGTA 57.144 29.630 0.00 0.00 0.00 2.24
322 323 8.762481 AAGTGAAATTGGTTTAGAAGGTAAGT 57.238 30.769 0.00 0.00 0.00 2.24
370 371 9.582431 CGTCCGTGAATTACCTTATATTATGAT 57.418 33.333 0.00 0.00 0.00 2.45
371 372 8.030692 CCGTCCGTGAATTACCTTATATTATGA 58.969 37.037 0.00 0.00 0.00 2.15
372 373 8.030692 TCCGTCCGTGAATTACCTTATATTATG 58.969 37.037 0.00 0.00 0.00 1.90
373 374 8.125978 TCCGTCCGTGAATTACCTTATATTAT 57.874 34.615 0.00 0.00 0.00 1.28
374 375 7.523293 TCCGTCCGTGAATTACCTTATATTA 57.477 36.000 0.00 0.00 0.00 0.98
375 376 6.409524 TCCGTCCGTGAATTACCTTATATT 57.590 37.500 0.00 0.00 0.00 1.28
376 377 6.409524 TTCCGTCCGTGAATTACCTTATAT 57.590 37.500 0.00 0.00 0.00 0.86
377 378 5.850557 TTCCGTCCGTGAATTACCTTATA 57.149 39.130 0.00 0.00 0.00 0.98
378 379 4.741321 TTCCGTCCGTGAATTACCTTAT 57.259 40.909 0.00 0.00 0.00 1.73
379 380 4.741321 ATTCCGTCCGTGAATTACCTTA 57.259 40.909 0.00 0.00 0.00 2.69
380 381 3.622166 ATTCCGTCCGTGAATTACCTT 57.378 42.857 0.00 0.00 0.00 3.50
381 382 3.622166 AATTCCGTCCGTGAATTACCT 57.378 42.857 11.69 0.00 39.88 3.08
382 383 3.685756 TCAAATTCCGTCCGTGAATTACC 59.314 43.478 12.95 0.00 40.57 2.85
383 384 4.932268 TCAAATTCCGTCCGTGAATTAC 57.068 40.909 12.95 0.00 40.57 1.89
384 385 5.179533 TCATCAAATTCCGTCCGTGAATTA 58.820 37.500 12.95 4.02 40.57 1.40
385 386 4.006989 TCATCAAATTCCGTCCGTGAATT 58.993 39.130 9.06 9.06 42.63 2.17
386 387 3.605634 TCATCAAATTCCGTCCGTGAAT 58.394 40.909 0.00 0.00 33.97 2.57
387 388 3.046968 TCATCAAATTCCGTCCGTGAA 57.953 42.857 0.00 0.00 0.00 3.18
388 389 2.739913 GTTCATCAAATTCCGTCCGTGA 59.260 45.455 0.00 0.00 0.00 4.35
389 390 2.482336 TGTTCATCAAATTCCGTCCGTG 59.518 45.455 0.00 0.00 0.00 4.94
390 391 2.773487 TGTTCATCAAATTCCGTCCGT 58.227 42.857 0.00 0.00 0.00 4.69
391 392 4.355543 AATGTTCATCAAATTCCGTCCG 57.644 40.909 0.00 0.00 0.00 4.79
392 393 8.702163 AAATAAATGTTCATCAAATTCCGTCC 57.298 30.769 0.00 0.00 0.00 4.79
433 434 9.626045 CGTTAGCATGTGATTTATCTGTCTATA 57.374 33.333 0.00 0.00 0.00 1.31
434 435 8.144478 ACGTTAGCATGTGATTTATCTGTCTAT 58.856 33.333 0.00 0.00 0.00 1.98
435 436 7.489160 ACGTTAGCATGTGATTTATCTGTCTA 58.511 34.615 0.00 0.00 0.00 2.59
436 437 6.341316 ACGTTAGCATGTGATTTATCTGTCT 58.659 36.000 0.00 0.00 0.00 3.41
437 438 6.589830 ACGTTAGCATGTGATTTATCTGTC 57.410 37.500 0.00 0.00 0.00 3.51
438 439 8.551205 CAATACGTTAGCATGTGATTTATCTGT 58.449 33.333 0.00 0.00 0.00 3.41
439 440 8.011673 CCAATACGTTAGCATGTGATTTATCTG 58.988 37.037 0.00 0.00 0.00 2.90
440 441 7.931407 TCCAATACGTTAGCATGTGATTTATCT 59.069 33.333 0.00 0.00 0.00 1.98
441 442 8.083462 TCCAATACGTTAGCATGTGATTTATC 57.917 34.615 0.00 0.00 0.00 1.75
442 443 8.445275 TTCCAATACGTTAGCATGTGATTTAT 57.555 30.769 0.00 0.00 0.00 1.40
443 444 7.851387 TTCCAATACGTTAGCATGTGATTTA 57.149 32.000 0.00 0.00 0.00 1.40
444 445 6.751514 TTCCAATACGTTAGCATGTGATTT 57.248 33.333 0.00 0.00 0.00 2.17
445 446 6.942532 ATTCCAATACGTTAGCATGTGATT 57.057 33.333 0.00 0.00 0.00 2.57
446 447 8.621532 AATATTCCAATACGTTAGCATGTGAT 57.378 30.769 0.00 0.00 0.00 3.06
447 448 8.445275 AAATATTCCAATACGTTAGCATGTGA 57.555 30.769 0.00 0.00 0.00 3.58
458 459 9.650371 CCATGCGAATATAAATATTCCAATACG 57.350 33.333 14.25 6.17 43.50 3.06
459 460 9.950680 CCCATGCGAATATAAATATTCCAATAC 57.049 33.333 14.25 3.68 43.50 1.89
460 461 8.629158 GCCCATGCGAATATAAATATTCCAATA 58.371 33.333 14.25 2.85 43.50 1.90
461 462 7.123997 TGCCCATGCGAATATAAATATTCCAAT 59.876 33.333 14.25 7.60 43.50 3.16
462 463 6.435591 TGCCCATGCGAATATAAATATTCCAA 59.564 34.615 14.25 6.02 43.50 3.53
463 464 5.948758 TGCCCATGCGAATATAAATATTCCA 59.051 36.000 14.25 13.19 43.50 3.53
464 465 6.449635 TGCCCATGCGAATATAAATATTCC 57.550 37.500 14.25 9.33 43.50 3.01
465 466 7.975616 ACAATGCCCATGCGAATATAAATATTC 59.024 33.333 11.20 11.20 43.16 1.75
466 467 7.839907 ACAATGCCCATGCGAATATAAATATT 58.160 30.769 0.00 0.00 41.78 1.28
467 468 7.408756 ACAATGCCCATGCGAATATAAATAT 57.591 32.000 0.00 0.00 41.78 1.28
468 469 6.832520 ACAATGCCCATGCGAATATAAATA 57.167 33.333 0.00 0.00 41.78 1.40
469 470 5.726980 ACAATGCCCATGCGAATATAAAT 57.273 34.783 0.00 0.00 41.78 1.40
470 471 5.301551 AGAACAATGCCCATGCGAATATAAA 59.698 36.000 0.00 0.00 41.78 1.40
471 472 4.826733 AGAACAATGCCCATGCGAATATAA 59.173 37.500 0.00 0.00 41.78 0.98
472 473 4.397420 AGAACAATGCCCATGCGAATATA 58.603 39.130 0.00 0.00 41.78 0.86
473 474 3.225104 AGAACAATGCCCATGCGAATAT 58.775 40.909 0.00 0.00 41.78 1.28
474 475 2.653726 AGAACAATGCCCATGCGAATA 58.346 42.857 0.00 0.00 41.78 1.75
475 476 1.477553 AGAACAATGCCCATGCGAAT 58.522 45.000 0.00 0.00 41.78 3.34
476 477 2.121291 TAGAACAATGCCCATGCGAA 57.879 45.000 0.00 0.00 41.78 4.70
477 478 2.346766 ATAGAACAATGCCCATGCGA 57.653 45.000 0.00 0.00 41.78 5.10
478 479 4.566545 TTAATAGAACAATGCCCATGCG 57.433 40.909 0.00 0.00 41.78 4.73
479 480 7.790823 ATTTTTAATAGAACAATGCCCATGC 57.209 32.000 0.00 0.00 38.26 4.06
495 496 9.594478 CGGGGCTATTTTTGTCTTATTTTTAAT 57.406 29.630 0.00 0.00 0.00 1.40
496 497 7.546316 GCGGGGCTATTTTTGTCTTATTTTTAA 59.454 33.333 0.00 0.00 0.00 1.52
497 498 7.036829 GCGGGGCTATTTTTGTCTTATTTTTA 58.963 34.615 0.00 0.00 0.00 1.52
498 499 5.872617 GCGGGGCTATTTTTGTCTTATTTTT 59.127 36.000 0.00 0.00 0.00 1.94
499 500 5.416083 GCGGGGCTATTTTTGTCTTATTTT 58.584 37.500 0.00 0.00 0.00 1.82
500 501 4.439563 CGCGGGGCTATTTTTGTCTTATTT 60.440 41.667 0.00 0.00 0.00 1.40
501 502 3.066203 CGCGGGGCTATTTTTGTCTTATT 59.934 43.478 0.00 0.00 0.00 1.40
502 503 2.616842 CGCGGGGCTATTTTTGTCTTAT 59.383 45.455 0.00 0.00 0.00 1.73
503 504 2.011222 CGCGGGGCTATTTTTGTCTTA 58.989 47.619 0.00 0.00 0.00 2.10
504 505 0.808755 CGCGGGGCTATTTTTGTCTT 59.191 50.000 0.00 0.00 0.00 3.01
505 506 1.654023 GCGCGGGGCTATTTTTGTCT 61.654 55.000 8.83 0.00 39.11 3.41
506 507 1.226575 GCGCGGGGCTATTTTTGTC 60.227 57.895 8.83 0.00 39.11 3.18
507 508 1.974343 TGCGCGGGGCTATTTTTGT 60.974 52.632 18.19 0.00 44.05 2.83
508 509 1.516169 GTGCGCGGGGCTATTTTTG 60.516 57.895 18.19 0.00 44.05 2.44
509 510 2.706834 GGTGCGCGGGGCTATTTTT 61.707 57.895 18.19 0.00 44.05 1.94
510 511 3.138128 GGTGCGCGGGGCTATTTT 61.138 61.111 18.19 0.00 44.05 1.82
609 612 4.463879 CCAGACAGGAGGCGGCAG 62.464 72.222 13.08 0.00 41.22 4.85
621 624 2.270527 GCTGGGAAGGAGCCAGAC 59.729 66.667 0.00 0.00 33.87 3.51
705 708 1.130613 GCAGCGCACTACGTTTCTG 59.869 57.895 11.47 0.00 46.11 3.02
709 712 2.738521 CAGGCAGCGCACTACGTT 60.739 61.111 11.47 0.00 46.11 3.99
710 713 4.742201 CCAGGCAGCGCACTACGT 62.742 66.667 11.47 0.00 46.11 3.57
730 741 3.533691 GCGTGCAGCGACGTAGAC 61.534 66.667 15.66 0.00 44.77 2.59
823 839 2.562635 TCGAACCCAAAATGACGAACA 58.437 42.857 0.00 0.00 0.00 3.18
954 971 2.560981 CGGTTTTGTTTATCTTGGCCCT 59.439 45.455 0.00 0.00 0.00 5.19
955 972 2.559231 TCGGTTTTGTTTATCTTGGCCC 59.441 45.455 0.00 0.00 0.00 5.80
956 973 3.926821 TCGGTTTTGTTTATCTTGGCC 57.073 42.857 0.00 0.00 0.00 5.36
957 974 4.862574 GGATTCGGTTTTGTTTATCTTGGC 59.137 41.667 0.00 0.00 0.00 4.52
958 975 5.092781 CGGATTCGGTTTTGTTTATCTTGG 58.907 41.667 0.00 0.00 0.00 3.61
959 976 5.933790 TCGGATTCGGTTTTGTTTATCTTG 58.066 37.500 0.00 0.00 36.95 3.02
960 977 6.563222 TTCGGATTCGGTTTTGTTTATCTT 57.437 33.333 0.00 0.00 36.95 2.40
961 978 6.753107 ATTCGGATTCGGTTTTGTTTATCT 57.247 33.333 0.00 0.00 36.95 1.98
962 979 8.898983 TTTATTCGGATTCGGTTTTGTTTATC 57.101 30.769 0.00 0.00 36.95 1.75
963 980 7.486870 GCTTTATTCGGATTCGGTTTTGTTTAT 59.513 33.333 0.00 0.00 36.95 1.40
964 981 6.802834 GCTTTATTCGGATTCGGTTTTGTTTA 59.197 34.615 0.00 0.00 36.95 2.01
965 982 5.631929 GCTTTATTCGGATTCGGTTTTGTTT 59.368 36.000 0.00 0.00 36.95 2.83
966 983 5.158494 GCTTTATTCGGATTCGGTTTTGTT 58.842 37.500 0.00 0.00 36.95 2.83
967 984 4.380128 GGCTTTATTCGGATTCGGTTTTGT 60.380 41.667 0.00 0.00 36.95 2.83
992 1009 1.061799 CGCGAACTGCATTGACTTGC 61.062 55.000 0.00 0.00 46.97 4.01
1115 1135 4.717629 CGCTCGCCCTCGTGTTCA 62.718 66.667 0.00 0.00 36.96 3.18
1154 1174 2.265739 GCGTGATGGTGAGCTCCA 59.734 61.111 12.15 3.48 42.01 3.86
1252 1272 2.917971 CGAACAGTAAGAGTGCACTAGC 59.082 50.000 21.73 8.58 42.57 3.42
1253 1273 3.057456 ACCGAACAGTAAGAGTGCACTAG 60.057 47.826 21.73 8.23 0.00 2.57
1254 1274 2.889045 ACCGAACAGTAAGAGTGCACTA 59.111 45.455 21.73 0.32 0.00 2.74
1295 1315 2.203538 CAGCCACCCTGCCTGTTT 60.204 61.111 0.00 0.00 34.21 2.83
1316 1338 3.976169 TGCCAAAGAGCATACAACAAAC 58.024 40.909 0.00 0.00 38.00 2.93
1393 1415 2.048970 ATCGCACGTGCCGTTGTA 60.049 55.556 33.23 13.10 38.32 2.41
1492 1514 3.387050 TCTTAATTTCCTCCGGGCTAGTC 59.613 47.826 0.00 0.00 0.00 2.59
1567 1598 2.489971 CAACCATGAAGTACACACGGT 58.510 47.619 5.28 5.28 32.53 4.83
1569 1600 1.870402 TGCAACCATGAAGTACACACG 59.130 47.619 0.00 0.00 0.00 4.49
1635 1666 7.502561 ACATTAGGGCTGACTATAAATTTGGTC 59.497 37.037 0.00 7.28 0.00 4.02
1658 1689 5.512753 TGCACATCAACACTAACAAACAT 57.487 34.783 0.00 0.00 0.00 2.71
1685 1716 5.299028 ACAATGTGCTAACAAACTCATCACA 59.701 36.000 0.00 0.00 40.46 3.58
1687 1718 5.530543 TGACAATGTGCTAACAAACTCATCA 59.469 36.000 0.00 0.00 40.46 3.07
1710 1741 7.201478 GCTTATTCTAGCTTCTAACACACACTG 60.201 40.741 0.00 0.00 38.15 3.66
1743 1774 8.060090 CGTTAAGGGAATAATTGTAATCACGTC 58.940 37.037 0.00 0.00 0.00 4.34
1829 1885 5.482686 ACAAAACAAACATGGCATGAAAC 57.517 34.783 32.74 0.00 0.00 2.78
1832 1888 3.875727 CCAACAAAACAAACATGGCATGA 59.124 39.130 32.74 0.00 0.00 3.07
2069 2125 7.378181 AGCCCATTTAACATGTCAAGTAAAAG 58.622 34.615 0.00 0.00 0.00 2.27
2078 2134 4.782019 TGACAAGCCCATTTAACATGTC 57.218 40.909 0.00 0.00 36.97 3.06
2080 2136 5.933463 ACAAATGACAAGCCCATTTAACATG 59.067 36.000 0.00 0.00 40.91 3.21
2154 2210 7.392393 TGGCATTGATCATACAGGAATCAATAG 59.608 37.037 8.91 6.15 39.20 1.73
2169 2225 3.947196 GGTGACTATGTTGGCATTGATCA 59.053 43.478 0.00 0.00 36.58 2.92
2171 2227 4.240881 AGGTGACTATGTTGGCATTGAT 57.759 40.909 0.00 0.00 40.61 2.57
2326 2383 7.014808 TCCATCGTAGTGATATGTTCCATAACA 59.985 37.037 0.00 0.00 41.86 2.41
2394 2451 8.336801 ACAGAAGTATTAAGGGTCATTGAAAC 57.663 34.615 0.00 0.00 0.00 2.78
2397 2454 8.934023 AAAACAGAAGTATTAAGGGTCATTGA 57.066 30.769 0.00 0.00 0.00 2.57
2428 2485 8.470805 ACACAACAAAATGTAAGAACCATGTAA 58.529 29.630 0.00 0.00 30.84 2.41
2486 2546 2.941720 CCTGTTTAGAAGGAGATGCTGC 59.058 50.000 0.00 0.00 36.91 5.25
2613 2673 9.892130 AATTAGAGATACGAGATTGGAAACTTT 57.108 29.630 0.00 0.00 0.00 2.66
2623 2684 9.255304 GAAAAAGCAGAATTAGAGATACGAGAT 57.745 33.333 0.00 0.00 0.00 2.75
2633 2694 7.132213 CGTGTTCTTGAAAAAGCAGAATTAGA 58.868 34.615 0.00 0.00 0.00 2.10
2636 2697 4.504097 GCGTGTTCTTGAAAAAGCAGAATT 59.496 37.500 6.59 0.00 0.00 2.17
2652 2713 6.958193 CAGAATTAGAGATTTCTTGCGTGTTC 59.042 38.462 0.00 0.00 34.79 3.18
2658 2719 6.674694 TGAGCAGAATTAGAGATTTCTTGC 57.325 37.500 0.00 0.00 34.79 4.01
2754 2815 9.593134 AGCAATGTTGTAGATCTAGTCTTTTAG 57.407 33.333 1.64 0.00 38.42 1.85
2839 2901 8.659925 TGTTCTTGTATTCAAAATTGCAATGT 57.340 26.923 13.82 3.97 32.87 2.71
2844 2906 6.369615 AGCCATGTTCTTGTATTCAAAATTGC 59.630 34.615 0.00 0.00 32.87 3.56
2859 2921 2.501723 ACGAAGTCCATAGCCATGTTCT 59.498 45.455 0.00 0.00 29.74 3.01
2902 2972 2.802816 GCTCGTGCTATCCTACAAATGG 59.197 50.000 1.41 0.00 36.03 3.16
2930 3000 9.507329 GGAAGATTGAGCATATTATCTACCAAA 57.493 33.333 0.00 0.00 0.00 3.28
2954 3024 5.940470 GGATGCTGTAGAAAGAAGAAAAGGA 59.060 40.000 0.00 0.00 0.00 3.36
3188 3258 3.321968 TCCGATGAGAGAGAGAGAGAGAG 59.678 52.174 0.00 0.00 0.00 3.20
3207 3283 4.226761 GCCAAACAAAATACTGAACTCCG 58.773 43.478 0.00 0.00 0.00 4.63
3223 3299 4.164843 TGGTAAGATATCCAGGCCAAAC 57.835 45.455 5.01 0.00 0.00 2.93
3237 3313 9.750783 ACTGTAGTTTCTAGTAAGATGGTAAGA 57.249 33.333 0.00 0.00 0.00 2.10
3264 3340 8.462016 AGGCTTTTTGTAGCTAAAGTCATTATG 58.538 33.333 12.53 0.00 38.19 1.90
3270 3346 7.611213 TGATAGGCTTTTTGTAGCTAAAGTC 57.389 36.000 3.56 3.56 40.99 3.01
3271 3347 9.681062 TTATGATAGGCTTTTTGTAGCTAAAGT 57.319 29.630 8.18 0.00 40.99 2.66
3295 3371 6.154021 AGAGTAGTTCTTTGCCCGTAAGATTA 59.846 38.462 0.00 0.00 32.30 1.75
3304 3380 3.006967 TCTGACAGAGTAGTTCTTTGCCC 59.993 47.826 0.00 0.00 32.41 5.36
3321 3397 8.650714 GGAAATTTTAGCATTTTCATGTCTGAC 58.349 33.333 0.00 0.00 32.30 3.51
3324 3400 9.860898 GTAGGAAATTTTAGCATTTTCATGTCT 57.139 29.630 0.00 0.00 32.30 3.41
3340 3416 9.807921 TCCAAGAAACAGATTAGTAGGAAATTT 57.192 29.630 0.00 0.00 0.00 1.82
3341 3417 9.232473 GTCCAAGAAACAGATTAGTAGGAAATT 57.768 33.333 0.00 0.00 0.00 1.82
3485 3561 2.005606 TTGCAGGCACTTTCCAGGGA 62.006 55.000 0.00 0.00 34.60 4.20
3524 3600 2.356125 GGTGGACATAGGCACAATCACT 60.356 50.000 0.00 0.00 0.00 3.41
3570 3646 0.679505 TATTCTTCGGGCTGATCGGG 59.320 55.000 3.14 0.00 0.00 5.14
3581 3657 6.183360 ACCGTCTGTAATTTGCTTATTCTTCG 60.183 38.462 0.00 0.00 0.00 3.79
3665 3741 2.192624 CAAAACCTTGTTTGTCAGGCG 58.807 47.619 0.00 0.00 34.43 5.52
3678 3756 4.446745 GGGGTAAGTCTACAACCAAAACCT 60.447 45.833 6.89 0.00 34.83 3.50
3719 3797 9.179909 TGGAATAAGTTGTTCTTACAAAGTTGA 57.820 29.630 11.56 0.00 45.33 3.18
3733 3811 3.189287 CGCTCTTGCTTGGAATAAGTTGT 59.811 43.478 0.00 0.00 36.97 3.32
3744 3822 3.615849 AGACTTTTTCGCTCTTGCTTG 57.384 42.857 0.00 0.00 36.97 4.01
3837 3915 9.720769 GCATATAGCTTGTACCCTTTTATCTTA 57.279 33.333 0.00 0.00 41.15 2.10
3843 3921 5.133221 CCTGCATATAGCTTGTACCCTTTT 58.867 41.667 0.00 0.00 45.94 2.27
3871 3949 4.486090 ACTCGCAGGCAAATATAGTATCG 58.514 43.478 0.00 0.00 0.00 2.92
3877 3955 4.137116 ACAAGACTCGCAGGCAAATATA 57.863 40.909 0.00 0.00 0.00 0.86
3878 3956 2.991250 ACAAGACTCGCAGGCAAATAT 58.009 42.857 0.00 0.00 0.00 1.28
3941 4020 4.312231 CACAACACCTGCGCACGG 62.312 66.667 20.07 20.07 0.00 4.94
3942 4021 3.506312 GACACAACACCTGCGCACG 62.506 63.158 5.66 5.13 0.00 5.34
3943 4022 2.327940 GACACAACACCTGCGCAC 59.672 61.111 5.66 0.00 0.00 5.34
3944 4023 3.268603 CGACACAACACCTGCGCA 61.269 61.111 10.98 10.98 0.00 6.09
3945 4024 4.012895 CCGACACAACACCTGCGC 62.013 66.667 0.00 0.00 0.00 6.09
3947 4026 0.953471 TATGCCGACACAACACCTGC 60.953 55.000 0.00 0.00 0.00 4.85
3948 4027 1.078709 CTATGCCGACACAACACCTG 58.921 55.000 0.00 0.00 0.00 4.00
3951 4030 0.721718 GAGCTATGCCGACACAACAC 59.278 55.000 0.00 0.00 0.00 3.32
3952 4031 0.608130 AGAGCTATGCCGACACAACA 59.392 50.000 0.00 0.00 0.00 3.33
4014 4157 5.175859 TGGCTAAATTCCTTGTTCTCGTAG 58.824 41.667 0.00 0.00 0.00 3.51
4026 4169 3.431415 ACCAAGGAACTGGCTAAATTCC 58.569 45.455 4.97 4.97 40.86 3.01
4048 4244 5.962433 AGGAATGAAAGAGACGACGAATAA 58.038 37.500 0.00 0.00 0.00 1.40
4075 4271 4.570930 ACACCCGCAAAAGAAAAGAAAAA 58.429 34.783 0.00 0.00 0.00 1.94
4076 4272 4.081917 AGACACCCGCAAAAGAAAAGAAAA 60.082 37.500 0.00 0.00 0.00 2.29
4077 4273 3.445805 AGACACCCGCAAAAGAAAAGAAA 59.554 39.130 0.00 0.00 0.00 2.52
4078 4274 3.020984 AGACACCCGCAAAAGAAAAGAA 58.979 40.909 0.00 0.00 0.00 2.52
4079 4275 2.616842 GAGACACCCGCAAAAGAAAAGA 59.383 45.455 0.00 0.00 0.00 2.52
4080 4276 2.618709 AGAGACACCCGCAAAAGAAAAG 59.381 45.455 0.00 0.00 0.00 2.27
4081 4277 2.650322 AGAGACACCCGCAAAAGAAAA 58.350 42.857 0.00 0.00 0.00 2.29
4082 4278 2.341846 AGAGACACCCGCAAAAGAAA 57.658 45.000 0.00 0.00 0.00 2.52
4083 4279 2.341846 AAGAGACACCCGCAAAAGAA 57.658 45.000 0.00 0.00 0.00 2.52
4084 4280 2.218603 GAAAGAGACACCCGCAAAAGA 58.781 47.619 0.00 0.00 0.00 2.52
4085 4281 1.946768 TGAAAGAGACACCCGCAAAAG 59.053 47.619 0.00 0.00 0.00 2.27
4086 4282 2.045561 TGAAAGAGACACCCGCAAAA 57.954 45.000 0.00 0.00 0.00 2.44
4087 4283 2.270352 ATGAAAGAGACACCCGCAAA 57.730 45.000 0.00 0.00 0.00 3.68
4088 4284 2.151202 GAATGAAAGAGACACCCGCAA 58.849 47.619 0.00 0.00 0.00 4.85
4089 4285 1.610624 GGAATGAAAGAGACACCCGCA 60.611 52.381 0.00 0.00 0.00 5.69
4090 4286 1.087501 GGAATGAAAGAGACACCCGC 58.912 55.000 0.00 0.00 0.00 6.13
4091 4287 2.076863 GTGGAATGAAAGAGACACCCG 58.923 52.381 0.00 0.00 0.00 5.28
4092 4288 2.437413 GGTGGAATGAAAGAGACACCC 58.563 52.381 0.00 0.00 41.81 4.61
4093 4289 2.040412 AGGGTGGAATGAAAGAGACACC 59.960 50.000 0.00 0.00 45.70 4.16
4094 4290 3.077359 CAGGGTGGAATGAAAGAGACAC 58.923 50.000 0.00 0.00 0.00 3.67
4095 4291 2.978978 TCAGGGTGGAATGAAAGAGACA 59.021 45.455 0.00 0.00 0.00 3.41
4096 4292 3.008485 ACTCAGGGTGGAATGAAAGAGAC 59.992 47.826 0.00 0.00 0.00 3.36
4097 4293 3.251484 ACTCAGGGTGGAATGAAAGAGA 58.749 45.455 0.00 0.00 0.00 3.10
4098 4294 3.710209 ACTCAGGGTGGAATGAAAGAG 57.290 47.619 0.00 0.00 0.00 2.85
4099 4295 4.453480 AAACTCAGGGTGGAATGAAAGA 57.547 40.909 0.00 0.00 0.00 2.52
4100 4296 5.560724 TCTAAACTCAGGGTGGAATGAAAG 58.439 41.667 0.00 0.00 0.00 2.62
4101 4297 5.576563 TCTAAACTCAGGGTGGAATGAAA 57.423 39.130 0.00 0.00 0.00 2.69
4102 4298 5.309543 TCTTCTAAACTCAGGGTGGAATGAA 59.690 40.000 0.00 0.00 0.00 2.57
4103 4299 4.844085 TCTTCTAAACTCAGGGTGGAATGA 59.156 41.667 0.00 0.00 0.00 2.57
4104 4300 4.938226 GTCTTCTAAACTCAGGGTGGAATG 59.062 45.833 0.00 0.00 0.00 2.67
4105 4301 4.322801 CGTCTTCTAAACTCAGGGTGGAAT 60.323 45.833 0.00 0.00 0.00 3.01
4116 4312 3.244579 GCGAACAACACGTCTTCTAAACT 59.755 43.478 0.00 0.00 0.00 2.66
4152 4348 9.162764 GCAAAAAGGAATACAGTACTATCTTGA 57.837 33.333 0.00 0.00 0.00 3.02
4153 4349 8.946085 TGCAAAAAGGAATACAGTACTATCTTG 58.054 33.333 0.00 0.00 0.00 3.02
4154 4350 9.167311 CTGCAAAAAGGAATACAGTACTATCTT 57.833 33.333 0.00 0.00 0.00 2.40
4155 4351 7.770897 CCTGCAAAAAGGAATACAGTACTATCT 59.229 37.037 0.00 0.00 40.02 1.98
4156 4352 7.553044 ACCTGCAAAAAGGAATACAGTACTATC 59.447 37.037 0.00 0.00 40.02 2.08
4157 4353 7.336931 CACCTGCAAAAAGGAATACAGTACTAT 59.663 37.037 0.00 0.00 40.02 2.12
4158 4354 6.653320 CACCTGCAAAAAGGAATACAGTACTA 59.347 38.462 0.00 0.00 40.02 1.82
4159 4355 5.473504 CACCTGCAAAAAGGAATACAGTACT 59.526 40.000 0.00 0.00 40.02 2.73
4160 4356 5.472137 TCACCTGCAAAAAGGAATACAGTAC 59.528 40.000 0.00 0.00 40.02 2.73
4161 4357 5.626142 TCACCTGCAAAAAGGAATACAGTA 58.374 37.500 0.00 0.00 40.02 2.74
4162 4358 4.469657 TCACCTGCAAAAAGGAATACAGT 58.530 39.130 0.00 0.00 40.02 3.55
4163 4359 5.649782 ATCACCTGCAAAAAGGAATACAG 57.350 39.130 0.00 0.00 40.02 2.74
4164 4360 7.716799 ATTATCACCTGCAAAAAGGAATACA 57.283 32.000 0.00 0.00 40.02 2.29
4167 4363 9.657419 CTTAAATTATCACCTGCAAAAAGGAAT 57.343 29.630 0.00 0.00 40.02 3.01
4168 4364 8.865090 TCTTAAATTATCACCTGCAAAAAGGAA 58.135 29.630 0.00 0.00 40.02 3.36
4169 4365 8.303876 GTCTTAAATTATCACCTGCAAAAAGGA 58.696 33.333 0.00 0.00 40.02 3.36
4170 4366 8.087750 TGTCTTAAATTATCACCTGCAAAAAGG 58.912 33.333 0.00 0.00 43.57 3.11
4171 4367 8.915654 GTGTCTTAAATTATCACCTGCAAAAAG 58.084 33.333 0.00 0.00 0.00 2.27
4172 4368 8.637986 AGTGTCTTAAATTATCACCTGCAAAAA 58.362 29.630 0.00 0.00 0.00 1.94
4173 4369 8.177119 AGTGTCTTAAATTATCACCTGCAAAA 57.823 30.769 0.00 0.00 0.00 2.44
4174 4370 7.759489 AGTGTCTTAAATTATCACCTGCAAA 57.241 32.000 0.00 0.00 0.00 3.68
4220 4416 5.291371 TGAAAACGGATCGCGTAATTGAATA 59.709 36.000 5.77 0.00 0.00 1.75
4280 4476 0.610687 GTGGAGGGAGGAACAGAGTG 59.389 60.000 0.00 0.00 0.00 3.51
4348 4555 9.646427 AATGAACAAGCACACTAAAACTAAAAA 57.354 25.926 0.00 0.00 0.00 1.94
4459 4666 4.280436 TCTGCTTCGGATGAGGTTTTTA 57.720 40.909 0.00 0.00 0.00 1.52
4464 4674 4.021016 GGTTATATCTGCTTCGGATGAGGT 60.021 45.833 0.00 0.00 31.33 3.85
4467 4677 5.139435 CAGGTTATATCTGCTTCGGATGA 57.861 43.478 0.00 0.00 31.33 2.92
4477 4687 6.147492 GCAGAGAATTCAGCAGGTTATATCTG 59.853 42.308 8.44 8.16 36.02 2.90
4479 4689 6.229733 AGCAGAGAATTCAGCAGGTTATATC 58.770 40.000 8.44 0.00 38.22 1.63
4480 4690 6.185114 AGCAGAGAATTCAGCAGGTTATAT 57.815 37.500 8.44 0.00 38.22 0.86
4481 4691 5.620738 AGCAGAGAATTCAGCAGGTTATA 57.379 39.130 8.44 0.00 38.22 0.98
4482 4692 4.500499 AGCAGAGAATTCAGCAGGTTAT 57.500 40.909 8.44 0.00 38.22 1.89
4483 4693 3.988976 AGCAGAGAATTCAGCAGGTTA 57.011 42.857 8.44 0.00 38.22 2.85
4505 4720 1.992170 GGCGACGATGACAAAGTAGT 58.008 50.000 0.00 0.00 0.00 2.73
4535 4750 0.512952 ATGTTGACGAAAGCACGAGC 59.487 50.000 0.00 0.00 42.56 5.03
4544 4759 0.327924 ATGGCCTGGATGTTGACGAA 59.672 50.000 3.32 0.00 0.00 3.85
4551 4769 2.501128 CGACGATGGCCTGGATGT 59.499 61.111 3.32 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.