Multiple sequence alignment - TraesCS3B01G304600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G304600 chr3B 100.000 7519 0 0 1 7519 489350968 489358486 0.000000e+00 13886.0
1 TraesCS3B01G304600 chr3B 99.669 605 2 0 4796 5400 489736608 489737212 0.000000e+00 1107.0
2 TraesCS3B01G304600 chr3B 97.518 564 14 0 2 565 651426666 651427229 0.000000e+00 965.0
3 TraesCS3B01G304600 chr3B 82.746 568 95 2 1 565 651501993 651502560 3.130000e-138 503.0
4 TraesCS3B01G304600 chr3B 99.091 220 2 0 2075 2294 489352800 489353019 5.470000e-106 396.0
5 TraesCS3B01G304600 chr3B 99.091 220 2 0 1833 2052 489353042 489353261 5.470000e-106 396.0
6 TraesCS3B01G304600 chr3B 95.327 214 8 2 562 773 489349340 489349127 9.350000e-89 339.0
7 TraesCS3B01G304600 chr3B 98.039 51 0 1 3070 3120 2885228 2885179 3.740000e-13 87.9
8 TraesCS3B01G304600 chr3D 96.709 2431 60 8 3112 5524 375194807 375197235 0.000000e+00 4028.0
9 TraesCS3B01G304600 chr3D 96.059 1294 35 6 774 2052 375192761 375194053 0.000000e+00 2093.0
10 TraesCS3B01G304600 chr3D 92.058 1385 73 12 5509 6880 375197374 375198734 0.000000e+00 1914.0
11 TraesCS3B01G304600 chr3D 96.285 996 29 4 2075 3070 375193834 375194821 0.000000e+00 1628.0
12 TraesCS3B01G304600 chr3D 96.986 564 17 0 2 565 488950674 488950111 0.000000e+00 948.0
13 TraesCS3B01G304600 chr3D 83.511 564 93 0 1 564 488903605 488903042 1.860000e-145 527.0
14 TraesCS3B01G304600 chr3D 88.889 441 15 9 7086 7519 375203076 375203489 5.200000e-141 512.0
15 TraesCS3B01G304600 chr3D 94.253 87 5 0 3145 3231 21904656 21904742 4.730000e-27 134.0
16 TraesCS3B01G304600 chr3D 96.970 33 1 0 7060 7092 375198982 375199014 1.000000e-03 56.5
17 TraesCS3B01G304600 chr3A 95.857 2462 78 7 4431 6880 498233774 498236223 0.000000e+00 3960.0
18 TraesCS3B01G304600 chr3A 95.861 1353 24 7 3112 4446 498230986 498232324 0.000000e+00 2159.0
19 TraesCS3B01G304600 chr3A 94.838 1298 33 8 774 2052 498228947 498230229 0.000000e+00 1995.0
20 TraesCS3B01G304600 chr3A 95.683 996 38 1 2075 3070 498230010 498231000 0.000000e+00 1596.0
21 TraesCS3B01G304600 chr3A 96.809 564 18 0 2 565 632040650 632041213 0.000000e+00 942.0
22 TraesCS3B01G304600 chr3A 83.697 687 49 23 6882 7519 498236309 498236981 2.340000e-164 590.0
23 TraesCS3B01G304600 chr3A 92.208 154 9 3 1758 1909 582283215 582283367 1.640000e-51 215.0
24 TraesCS3B01G304600 chr4B 97.416 774 19 1 1 773 46933665 46934438 0.000000e+00 1317.0
25 TraesCS3B01G304600 chr4B 94.931 217 9 2 562 776 46923388 46923172 9.350000e-89 339.0
26 TraesCS3B01G304600 chr4B 100.000 50 0 0 3070 3119 126079263 126079214 8.030000e-15 93.5
27 TraesCS3B01G304600 chr2B 95.624 777 21 3 3 777 254626750 254625985 0.000000e+00 1234.0
28 TraesCS3B01G304600 chr2B 93.458 214 12 2 562 773 24026077 24026290 4.380000e-82 316.0
29 TraesCS3B01G304600 chr2B 94.000 200 10 2 576 773 239858678 239858479 1.230000e-77 302.0
30 TraesCS3B01G304600 chr2B 92.381 210 14 2 562 769 24017133 24016924 1.590000e-76 298.0
31 TraesCS3B01G304600 chr2B 84.507 71 11 0 2574 2644 80633806 80633736 3.760000e-08 71.3
32 TraesCS3B01G304600 chr2B 80.263 76 15 0 2574 2649 80629440 80629365 2.930000e-04 58.4
33 TraesCS3B01G304600 chr7D 92.021 564 45 0 2 565 89311534 89310971 0.000000e+00 793.0
34 TraesCS3B01G304600 chr7D 93.103 87 6 0 3145 3231 336507053 336506967 2.200000e-25 128.0
35 TraesCS3B01G304600 chr7D 96.226 53 1 1 3070 3122 211870893 211870842 1.340000e-12 86.1
36 TraesCS3B01G304600 chr7B 91.312 564 42 3 2 565 40276183 40275627 0.000000e+00 763.0
37 TraesCS3B01G304600 chr7B 90.303 165 12 2 1756 1916 229095719 229095555 5.910000e-51 213.0
38 TraesCS3B01G304600 chr7B 93.103 87 6 0 3145 3231 125509262 125509348 2.200000e-25 128.0
39 TraesCS3B01G304600 chr1B 94.089 203 10 2 576 776 605557342 605557140 2.640000e-79 307.0
40 TraesCS3B01G304600 chr1B 91.163 215 17 2 562 774 659947744 659947958 2.650000e-74 291.0
41 TraesCS3B01G304600 chr1B 82.677 254 31 10 1036 1284 576214824 576215069 5.910000e-51 213.0
42 TraesCS3B01G304600 chr1B 90.683 161 11 4 1758 1917 632021077 632020920 2.130000e-50 211.0
43 TraesCS3B01G304600 chr5D 90.826 218 16 4 562 776 387823712 387823928 9.550000e-74 289.0
44 TraesCS3B01G304600 chr5D 93.103 87 6 0 3145 3231 6201252 6201166 2.200000e-25 128.0
45 TraesCS3B01G304600 chr5D 100.000 28 0 0 2124 2151 341034301 341034274 1.400000e-02 52.8
46 TraesCS3B01G304600 chr4D 92.208 154 10 1 1758 1909 74079351 74079504 4.570000e-52 217.0
47 TraesCS3B01G304600 chr4D 94.253 87 5 0 3145 3231 19916524 19916610 4.730000e-27 134.0
48 TraesCS3B01G304600 chr4D 83.582 67 8 3 2075 2140 68629569 68629505 8.150000e-05 60.2
49 TraesCS3B01G304600 chr2D 91.195 159 13 1 1756 1913 79056165 79056323 1.640000e-51 215.0
50 TraesCS3B01G304600 chr2D 89.091 165 14 3 1757 1920 600403940 600403779 1.280000e-47 202.0
51 TraesCS3B01G304600 chr1D 85.782 211 19 8 1076 1282 426595067 426595270 5.910000e-51 213.0
52 TraesCS3B01G304600 chr1D 93.103 87 6 0 3145 3231 254498026 254498112 2.200000e-25 128.0
53 TraesCS3B01G304600 chr1A 85.185 216 21 8 1070 1281 521639782 521639990 2.130000e-50 211.0
54 TraesCS3B01G304600 chr1A 93.103 87 6 0 3145 3231 112776006 112775920 2.200000e-25 128.0
55 TraesCS3B01G304600 chr7A 100.000 48 0 0 3070 3117 213103387 213103340 1.040000e-13 89.8
56 TraesCS3B01G304600 chr7A 98.000 50 1 0 3070 3119 126044630 126044581 3.740000e-13 87.9
57 TraesCS3B01G304600 chr7A 96.296 54 1 1 3070 3122 223677424 223677371 3.740000e-13 87.9
58 TraesCS3B01G304600 chr5B 100.000 48 0 0 3070 3117 339629834 339629787 1.040000e-13 89.8
59 TraesCS3B01G304600 chr2A 98.000 50 1 0 3070 3119 457916830 457916879 3.740000e-13 87.9
60 TraesCS3B01G304600 chr5A 87.013 77 9 1 2075 2151 283309130 283309205 1.340000e-12 86.1
61 TraesCS3B01G304600 chr4A 94.545 55 2 1 3070 3124 522909788 522909841 4.830000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G304600 chr3B 489350968 489358486 7518 False 13886.0 13886 100.0000 1 7519 1 chr3B.!!$F1 7518
1 TraesCS3B01G304600 chr3B 489736608 489737212 604 False 1107.0 1107 99.6690 4796 5400 1 chr3B.!!$F2 604
2 TraesCS3B01G304600 chr3B 651426666 651427229 563 False 965.0 965 97.5180 2 565 1 chr3B.!!$F3 563
3 TraesCS3B01G304600 chr3B 651501993 651502560 567 False 503.0 503 82.7460 1 565 1 chr3B.!!$F4 564
4 TraesCS3B01G304600 chr3D 375192761 375199014 6253 False 1943.9 4028 95.6162 774 7092 5 chr3D.!!$F3 6318
5 TraesCS3B01G304600 chr3D 488950111 488950674 563 True 948.0 948 96.9860 2 565 1 chr3D.!!$R2 563
6 TraesCS3B01G304600 chr3D 488903042 488903605 563 True 527.0 527 83.5110 1 564 1 chr3D.!!$R1 563
7 TraesCS3B01G304600 chr3A 498228947 498236981 8034 False 2060.0 3960 93.1872 774 7519 5 chr3A.!!$F3 6745
8 TraesCS3B01G304600 chr3A 632040650 632041213 563 False 942.0 942 96.8090 2 565 1 chr3A.!!$F2 563
9 TraesCS3B01G304600 chr4B 46933665 46934438 773 False 1317.0 1317 97.4160 1 773 1 chr4B.!!$F1 772
10 TraesCS3B01G304600 chr2B 254625985 254626750 765 True 1234.0 1234 95.6240 3 777 1 chr2B.!!$R5 774
11 TraesCS3B01G304600 chr7D 89310971 89311534 563 True 793.0 793 92.0210 2 565 1 chr7D.!!$R1 563
12 TraesCS3B01G304600 chr7B 40275627 40276183 556 True 763.0 763 91.3120 2 565 1 chr7B.!!$R1 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
425 429 1.380302 GGCTGGCCTTCTTCCTCAA 59.620 57.895 3.32 0.00 0.00 3.02 F
2052 2091 0.178953 ATGAAAGTGGGGTGCTGCTT 60.179 50.000 0.00 0.00 0.00 3.91 F
2229 2268 0.107993 CACACCGTCTGATCAGCCAT 60.108 55.000 18.36 0.39 0.00 4.40 F
2255 2294 0.179225 GTTTGCGTACTGTGGCGATG 60.179 55.000 10.02 0.00 0.00 3.84 F
3089 3128 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85 F
3099 3138 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45 F
3100 3139 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51 F
3110 3149 0.550914 TGCACTGGGTCTGTCCTTTT 59.449 50.000 0.00 0.00 36.25 2.27 F
3111 3150 1.064017 TGCACTGGGTCTGTCCTTTTT 60.064 47.619 0.00 0.00 36.25 1.94 F
5545 7233 0.247185 TTGCTGGCATTAGGCTTTGC 59.753 50.000 12.26 12.26 44.01 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2210 2249 0.107993 ATGGCTGATCAGACGGTGTG 60.108 55.000 27.04 0.00 40.06 3.82 R
3080 3119 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30 R
3081 3120 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70 R
3091 3130 0.550914 AAAAGGACAGACCCAGTGCA 59.449 50.000 0.00 0.00 40.05 4.57 R
4703 6227 0.681175 CACTCCCAAAAGGGCAAAGG 59.319 55.000 0.00 0.00 35.67 3.11 R
5445 6979 5.534407 TCTGATGACTACTTTTACGCACAA 58.466 37.500 0.00 0.00 0.00 3.33 R
5480 7014 0.323725 ATGGATCGCAAGGCCAACTT 60.324 50.000 5.01 0.00 43.44 2.66 R
5528 7216 4.821177 GCAAAGCCTAATGCCAGC 57.179 55.556 0.00 0.00 42.71 4.85 R
5548 7236 0.250553 TCACCCATTCACCCGTGTTC 60.251 55.000 0.00 0.00 0.00 3.18 R
7118 8944 0.096454 CGCTTGTTAAGGCGTTAGGC 59.904 55.000 8.60 3.08 45.34 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.363276 ACGCTGGACCGGTGGATA 60.363 61.111 14.63 0.00 0.00 2.59
147 148 3.611674 TTCACGCGCCTGTCCTCA 61.612 61.111 5.73 0.00 0.00 3.86
322 326 3.234630 ATGGTGCCGCAGTACGTGT 62.235 57.895 0.00 0.00 41.42 4.49
425 429 1.380302 GGCTGGCCTTCTTCCTCAA 59.620 57.895 3.32 0.00 0.00 3.02
639 644 2.274645 CCACTTGGCGGCCAATTGA 61.275 57.895 38.35 19.67 43.79 2.57
712 717 4.682401 GGTATGGTTTGGTTTAGTTTTGCG 59.318 41.667 0.00 0.00 0.00 4.85
739 744 7.888021 ACTTTGGGACTAAATCATCACATTGTA 59.112 33.333 0.00 0.00 0.00 2.41
802 807 9.744468 CGGAAAAGGAAAGAAATTAAAGAAAGA 57.256 29.630 0.00 0.00 0.00 2.52
1294 1331 1.079543 CAGGTGAGAACGGGAGCTG 60.080 63.158 0.00 0.00 0.00 4.24
1295 1332 2.435059 GGTGAGAACGGGAGCTGC 60.435 66.667 0.00 0.00 0.00 5.25
1296 1333 2.811317 GTGAGAACGGGAGCTGCG 60.811 66.667 0.00 0.00 0.00 5.18
1297 1334 4.742201 TGAGAACGGGAGCTGCGC 62.742 66.667 0.00 0.00 0.00 6.09
1367 1404 1.890510 GGTTCGGTGTGTGGTGGTC 60.891 63.158 0.00 0.00 0.00 4.02
1506 1545 1.388547 TTGCGGCACTTTTGACTTCT 58.611 45.000 0.05 0.00 0.00 2.85
1534 1573 2.998772 GCTTGAGCGACAAATTTCACA 58.001 42.857 0.00 0.00 38.08 3.58
1568 1607 4.202245 TCAGGTCCATTAGTTCTTTCCG 57.798 45.455 0.00 0.00 0.00 4.30
1662 1701 0.942252 GGGCATCGGATTACGGAAAC 59.058 55.000 0.00 0.00 44.45 2.78
1861 1900 6.663523 TCACTCATTTCAGTCCTCATGTAGTA 59.336 38.462 0.00 0.00 0.00 1.82
1929 1968 7.201794 GGAGTACCATTTTAGATAAAAGTGCCC 60.202 40.741 4.29 2.63 38.42 5.36
1933 1972 8.658840 ACCATTTTAGATAAAAGTGCCCTAAA 57.341 30.769 4.29 0.00 38.42 1.85
1948 1987 3.718815 CCCTAAACCTATTCTCGCTGAC 58.281 50.000 0.00 0.00 0.00 3.51
1993 2032 0.746923 GTCTGATCAGCCATGCAGCA 60.747 55.000 18.36 0.00 34.23 4.41
2033 2072 1.271379 GGAGTACACCATGACGTCACA 59.729 52.381 22.71 0.00 0.00 3.58
2034 2073 2.094182 GGAGTACACCATGACGTCACAT 60.094 50.000 22.71 2.38 0.00 3.21
2035 2074 2.923655 GAGTACACCATGACGTCACATG 59.076 50.000 22.71 20.34 44.78 3.21
2043 2082 1.877637 TGACGTCACATGAAAGTGGG 58.122 50.000 15.76 0.00 39.93 4.61
2044 2083 1.156736 GACGTCACATGAAAGTGGGG 58.843 55.000 11.55 0.00 39.93 4.96
2045 2084 0.472471 ACGTCACATGAAAGTGGGGT 59.528 50.000 0.00 0.00 39.93 4.95
2046 2085 0.874390 CGTCACATGAAAGTGGGGTG 59.126 55.000 0.00 0.00 39.93 4.61
2047 2086 0.598065 GTCACATGAAAGTGGGGTGC 59.402 55.000 0.00 0.00 39.93 5.01
2048 2087 0.478072 TCACATGAAAGTGGGGTGCT 59.522 50.000 0.00 0.00 39.93 4.40
2049 2088 0.599558 CACATGAAAGTGGGGTGCTG 59.400 55.000 0.00 0.00 35.88 4.41
2050 2089 1.181098 ACATGAAAGTGGGGTGCTGC 61.181 55.000 0.00 0.00 0.00 5.25
2051 2090 0.896940 CATGAAAGTGGGGTGCTGCT 60.897 55.000 0.00 0.00 0.00 4.24
2052 2091 0.178953 ATGAAAGTGGGGTGCTGCTT 60.179 50.000 0.00 0.00 0.00 3.91
2053 2092 0.396974 TGAAAGTGGGGTGCTGCTTT 60.397 50.000 0.00 0.00 34.34 3.51
2054 2093 0.752658 GAAAGTGGGGTGCTGCTTTT 59.247 50.000 0.00 0.00 32.14 2.27
2055 2094 1.960689 GAAAGTGGGGTGCTGCTTTTA 59.039 47.619 0.00 0.00 32.14 1.52
2056 2095 2.309136 AAGTGGGGTGCTGCTTTTAT 57.691 45.000 0.00 0.00 0.00 1.40
2057 2096 1.839424 AGTGGGGTGCTGCTTTTATC 58.161 50.000 0.00 0.00 0.00 1.75
2058 2097 1.355720 AGTGGGGTGCTGCTTTTATCT 59.644 47.619 0.00 0.00 0.00 1.98
2059 2098 2.576191 AGTGGGGTGCTGCTTTTATCTA 59.424 45.455 0.00 0.00 0.00 1.98
2060 2099 3.010138 AGTGGGGTGCTGCTTTTATCTAA 59.990 43.478 0.00 0.00 0.00 2.10
2061 2100 3.761752 GTGGGGTGCTGCTTTTATCTAAA 59.238 43.478 0.00 0.00 0.00 1.85
2062 2101 4.219725 GTGGGGTGCTGCTTTTATCTAAAA 59.780 41.667 0.00 0.00 34.35 1.52
2063 2102 5.022787 TGGGGTGCTGCTTTTATCTAAAAT 58.977 37.500 0.00 0.00 34.95 1.82
2064 2103 5.127031 TGGGGTGCTGCTTTTATCTAAAATC 59.873 40.000 0.00 0.00 34.95 2.17
2065 2104 5.127031 GGGGTGCTGCTTTTATCTAAAATCA 59.873 40.000 0.00 0.00 34.95 2.57
2066 2105 6.183360 GGGGTGCTGCTTTTATCTAAAATCAT 60.183 38.462 0.00 0.00 32.83 2.45
2067 2106 6.920210 GGGTGCTGCTTTTATCTAAAATCATC 59.080 38.462 0.00 0.00 32.83 2.92
2068 2107 7.201857 GGGTGCTGCTTTTATCTAAAATCATCT 60.202 37.037 0.00 0.00 32.83 2.90
2069 2108 8.193438 GGTGCTGCTTTTATCTAAAATCATCTT 58.807 33.333 0.00 0.00 32.83 2.40
2089 2128 9.942850 TCATCTTATACTTGTTCACTCATTTCA 57.057 29.630 0.00 0.00 0.00 2.69
2091 2130 9.950496 ATCTTATACTTGTTCACTCATTTCAGT 57.050 29.630 0.00 0.00 0.00 3.41
2092 2131 9.424319 TCTTATACTTGTTCACTCATTTCAGTC 57.576 33.333 0.00 0.00 0.00 3.51
2093 2132 8.547967 TTATACTTGTTCACTCATTTCAGTCC 57.452 34.615 0.00 0.00 0.00 3.85
2094 2133 5.041191 ACTTGTTCACTCATTTCAGTCCT 57.959 39.130 0.00 0.00 0.00 3.85
2095 2134 5.059833 ACTTGTTCACTCATTTCAGTCCTC 58.940 41.667 0.00 0.00 0.00 3.71
2096 2135 4.687901 TGTTCACTCATTTCAGTCCTCA 57.312 40.909 0.00 0.00 0.00 3.86
2097 2136 5.233083 TGTTCACTCATTTCAGTCCTCAT 57.767 39.130 0.00 0.00 0.00 2.90
2098 2137 4.999311 TGTTCACTCATTTCAGTCCTCATG 59.001 41.667 0.00 0.00 0.00 3.07
2099 2138 4.897509 TCACTCATTTCAGTCCTCATGT 57.102 40.909 0.00 0.00 0.00 3.21
2100 2139 6.166279 GTTCACTCATTTCAGTCCTCATGTA 58.834 40.000 0.00 0.00 0.00 2.29
2101 2140 5.970592 TCACTCATTTCAGTCCTCATGTAG 58.029 41.667 0.00 0.00 0.00 2.74
2102 2141 5.481824 TCACTCATTTCAGTCCTCATGTAGT 59.518 40.000 0.00 0.00 0.00 2.73
2103 2142 6.663523 TCACTCATTTCAGTCCTCATGTAGTA 59.336 38.462 0.00 0.00 0.00 1.82
2104 2143 6.754209 CACTCATTTCAGTCCTCATGTAGTAC 59.246 42.308 0.00 0.00 0.00 2.73
2105 2144 6.437477 ACTCATTTCAGTCCTCATGTAGTACA 59.563 38.462 5.24 5.24 0.00 2.90
2106 2145 7.124901 ACTCATTTCAGTCCTCATGTAGTACAT 59.875 37.037 10.10 10.10 39.91 2.29
2107 2146 8.533569 TCATTTCAGTCCTCATGTAGTACATA 57.466 34.615 15.38 0.00 36.53 2.29
2108 2147 9.147732 TCATTTCAGTCCTCATGTAGTACATAT 57.852 33.333 15.38 0.00 36.53 1.78
2109 2148 9.770097 CATTTCAGTCCTCATGTAGTACATATT 57.230 33.333 15.38 0.00 36.53 1.28
2110 2149 9.770097 ATTTCAGTCCTCATGTAGTACATATTG 57.230 33.333 15.38 5.80 36.53 1.90
2111 2150 8.533569 TTCAGTCCTCATGTAGTACATATTGA 57.466 34.615 15.38 9.76 36.53 2.57
2112 2151 8.533569 TCAGTCCTCATGTAGTACATATTGAA 57.466 34.615 15.38 0.00 36.53 2.69
2113 2152 8.977412 TCAGTCCTCATGTAGTACATATTGAAA 58.023 33.333 15.38 0.35 36.53 2.69
2114 2153 9.770097 CAGTCCTCATGTAGTACATATTGAAAT 57.230 33.333 15.38 2.95 36.53 2.17
2142 2181 9.529325 TCTAAATCATCTTATACTTGTGAACGG 57.471 33.333 0.00 0.00 0.00 4.44
2143 2182 9.529325 CTAAATCATCTTATACTTGTGAACGGA 57.471 33.333 0.00 0.00 0.00 4.69
2144 2183 8.425577 AAATCATCTTATACTTGTGAACGGAG 57.574 34.615 0.00 0.00 0.00 4.63
2145 2184 5.902681 TCATCTTATACTTGTGAACGGAGG 58.097 41.667 0.00 0.00 0.00 4.30
2146 2185 4.730949 TCTTATACTTGTGAACGGAGGG 57.269 45.455 0.00 0.00 0.00 4.30
2147 2186 4.346730 TCTTATACTTGTGAACGGAGGGA 58.653 43.478 0.00 0.00 0.00 4.20
2148 2187 4.401519 TCTTATACTTGTGAACGGAGGGAG 59.598 45.833 0.00 0.00 0.00 4.30
2149 2188 2.005370 TACTTGTGAACGGAGGGAGT 57.995 50.000 0.00 0.00 0.00 3.85
2150 2189 2.005370 ACTTGTGAACGGAGGGAGTA 57.995 50.000 0.00 0.00 0.00 2.59
2151 2190 1.617357 ACTTGTGAACGGAGGGAGTAC 59.383 52.381 0.00 0.00 0.00 2.73
2152 2191 0.971386 TTGTGAACGGAGGGAGTACC 59.029 55.000 0.00 0.00 40.67 3.34
2153 2192 0.178955 TGTGAACGGAGGGAGTACCA 60.179 55.000 0.00 0.00 43.89 3.25
2154 2193 1.192428 GTGAACGGAGGGAGTACCAT 58.808 55.000 0.00 0.00 43.89 3.55
2155 2194 1.553704 GTGAACGGAGGGAGTACCATT 59.446 52.381 0.00 0.00 43.89 3.16
2156 2195 2.027469 GTGAACGGAGGGAGTACCATTT 60.027 50.000 0.00 0.00 43.89 2.32
2157 2196 2.640826 TGAACGGAGGGAGTACCATTTT 59.359 45.455 0.00 0.00 43.89 1.82
2158 2197 3.839490 TGAACGGAGGGAGTACCATTTTA 59.161 43.478 0.00 0.00 43.89 1.52
2159 2198 4.081309 TGAACGGAGGGAGTACCATTTTAG 60.081 45.833 0.00 0.00 43.89 1.85
2160 2199 3.716431 ACGGAGGGAGTACCATTTTAGA 58.284 45.455 0.00 0.00 43.89 2.10
2161 2200 4.296056 ACGGAGGGAGTACCATTTTAGAT 58.704 43.478 0.00 0.00 43.89 1.98
2162 2201 5.461327 ACGGAGGGAGTACCATTTTAGATA 58.539 41.667 0.00 0.00 43.89 1.98
2163 2202 5.901276 ACGGAGGGAGTACCATTTTAGATAA 59.099 40.000 0.00 0.00 43.89 1.75
2164 2203 6.384886 ACGGAGGGAGTACCATTTTAGATAAA 59.615 38.462 0.00 0.00 43.89 1.40
2165 2204 7.092757 ACGGAGGGAGTACCATTTTAGATAAAA 60.093 37.037 0.00 0.54 43.89 1.52
2166 2205 7.441458 CGGAGGGAGTACCATTTTAGATAAAAG 59.559 40.741 0.00 0.00 43.89 2.27
2167 2206 8.272889 GGAGGGAGTACCATTTTAGATAAAAGT 58.727 37.037 0.00 1.06 43.89 2.66
2168 2207 9.110502 GAGGGAGTACCATTTTAGATAAAAGTG 57.889 37.037 0.00 3.47 43.89 3.16
2169 2208 7.556635 AGGGAGTACCATTTTAGATAAAAGTGC 59.443 37.037 0.00 2.11 43.89 4.40
2170 2209 7.201794 GGGAGTACCATTTTAGATAAAAGTGCC 60.202 40.741 4.29 0.00 38.42 5.01
2171 2210 7.201794 GGAGTACCATTTTAGATAAAAGTGCCC 60.202 40.741 4.29 2.63 38.42 5.36
2172 2211 7.410991 AGTACCATTTTAGATAAAAGTGCCCT 58.589 34.615 4.29 0.00 38.42 5.19
2173 2212 8.554011 AGTACCATTTTAGATAAAAGTGCCCTA 58.446 33.333 4.29 0.00 38.42 3.53
2174 2213 9.181061 GTACCATTTTAGATAAAAGTGCCCTAA 57.819 33.333 4.29 0.00 38.42 2.69
2175 2214 8.658840 ACCATTTTAGATAAAAGTGCCCTAAA 57.341 30.769 4.29 0.00 38.42 1.85
2176 2215 8.528643 ACCATTTTAGATAAAAGTGCCCTAAAC 58.471 33.333 4.29 0.00 38.42 2.01
2177 2216 7.979537 CCATTTTAGATAAAAGTGCCCTAAACC 59.020 37.037 4.29 0.00 38.42 3.27
2178 2217 8.749354 CATTTTAGATAAAAGTGCCCTAAACCT 58.251 33.333 4.29 0.00 38.42 3.50
2179 2218 9.984590 ATTTTAGATAAAAGTGCCCTAAACCTA 57.015 29.630 4.29 0.00 38.42 3.08
2180 2219 9.984590 TTTTAGATAAAAGTGCCCTAAACCTAT 57.015 29.630 0.00 0.00 31.48 2.57
2181 2220 9.984590 TTTAGATAAAAGTGCCCTAAACCTATT 57.015 29.630 0.00 0.00 0.00 1.73
2182 2221 9.623000 TTAGATAAAAGTGCCCTAAACCTATTC 57.377 33.333 0.00 0.00 0.00 1.75
2183 2222 7.873195 AGATAAAAGTGCCCTAAACCTATTCT 58.127 34.615 0.00 0.00 0.00 2.40
2184 2223 7.775561 AGATAAAAGTGCCCTAAACCTATTCTG 59.224 37.037 0.00 0.00 0.00 3.02
2185 2224 3.933861 AGTGCCCTAAACCTATTCTGG 57.066 47.619 0.00 0.00 0.00 3.86
2186 2225 2.092375 AGTGCCCTAAACCTATTCTGGC 60.092 50.000 0.00 0.00 37.90 4.85
2187 2226 2.092375 GTGCCCTAAACCTATTCTGGCT 60.092 50.000 0.00 0.00 38.23 4.75
2188 2227 2.092429 TGCCCTAAACCTATTCTGGCTG 60.092 50.000 0.00 0.00 38.23 4.85
2189 2228 2.172717 GCCCTAAACCTATTCTGGCTGA 59.827 50.000 0.00 0.00 34.61 4.26
2190 2229 3.181439 GCCCTAAACCTATTCTGGCTGAT 60.181 47.826 0.00 0.00 34.61 2.90
2191 2230 4.646572 CCCTAAACCTATTCTGGCTGATC 58.353 47.826 0.00 0.00 0.00 2.92
2192 2231 4.349342 CCCTAAACCTATTCTGGCTGATCT 59.651 45.833 0.00 0.00 0.00 2.75
2193 2232 5.163152 CCCTAAACCTATTCTGGCTGATCTT 60.163 44.000 0.00 0.00 0.00 2.40
2194 2233 6.043243 CCCTAAACCTATTCTGGCTGATCTTA 59.957 42.308 0.00 0.00 0.00 2.10
2195 2234 7.256835 CCCTAAACCTATTCTGGCTGATCTTAT 60.257 40.741 0.00 0.00 0.00 1.73
2196 2235 7.605691 CCTAAACCTATTCTGGCTGATCTTATG 59.394 40.741 0.00 0.00 0.00 1.90
2197 2236 5.495926 ACCTATTCTGGCTGATCTTATGG 57.504 43.478 0.00 0.00 0.00 2.74
2198 2237 4.910304 ACCTATTCTGGCTGATCTTATGGT 59.090 41.667 0.00 0.00 0.00 3.55
2199 2238 5.221803 ACCTATTCTGGCTGATCTTATGGTG 60.222 44.000 0.00 0.00 0.00 4.17
2200 2239 2.627515 TCTGGCTGATCTTATGGTGC 57.372 50.000 0.00 0.00 0.00 5.01
2201 2240 2.121948 TCTGGCTGATCTTATGGTGCT 58.878 47.619 0.00 0.00 0.00 4.40
2202 2241 3.308401 TCTGGCTGATCTTATGGTGCTA 58.692 45.455 0.00 0.00 0.00 3.49
2203 2242 3.711190 TCTGGCTGATCTTATGGTGCTAA 59.289 43.478 0.00 0.00 0.00 3.09
2204 2243 4.063689 CTGGCTGATCTTATGGTGCTAAG 58.936 47.826 0.00 0.00 0.00 2.18
2205 2244 3.181451 TGGCTGATCTTATGGTGCTAAGG 60.181 47.826 0.00 0.00 31.02 2.69
2206 2245 3.406764 GCTGATCTTATGGTGCTAAGGG 58.593 50.000 0.00 0.00 31.02 3.95
2207 2246 3.406764 CTGATCTTATGGTGCTAAGGGC 58.593 50.000 0.00 0.00 42.22 5.19
2222 2261 2.347490 GGCACCACACCGTCTGAT 59.653 61.111 0.00 0.00 0.00 2.90
2223 2262 1.741770 GGCACCACACCGTCTGATC 60.742 63.158 0.00 0.00 0.00 2.92
2224 2263 1.005037 GCACCACACCGTCTGATCA 60.005 57.895 0.00 0.00 0.00 2.92
2225 2264 1.016130 GCACCACACCGTCTGATCAG 61.016 60.000 17.07 17.07 0.00 2.90
2226 2265 1.016130 CACCACACCGTCTGATCAGC 61.016 60.000 18.36 11.88 0.00 4.26
2227 2266 1.448540 CCACACCGTCTGATCAGCC 60.449 63.158 18.36 5.64 0.00 4.85
2228 2267 1.293179 CACACCGTCTGATCAGCCA 59.707 57.895 18.36 0.00 0.00 4.75
2229 2268 0.107993 CACACCGTCTGATCAGCCAT 60.108 55.000 18.36 0.39 0.00 4.40
2230 2269 0.107993 ACACCGTCTGATCAGCCATG 60.108 55.000 18.36 14.51 0.00 3.66
2231 2270 1.153289 ACCGTCTGATCAGCCATGC 60.153 57.895 18.36 4.71 0.00 4.06
2232 2271 1.153309 CCGTCTGATCAGCCATGCA 60.153 57.895 18.36 0.00 0.00 3.96
2233 2272 1.158484 CCGTCTGATCAGCCATGCAG 61.158 60.000 18.36 3.83 0.00 4.41
2234 2273 1.773054 CGTCTGATCAGCCATGCAGC 61.773 60.000 18.36 0.00 0.00 5.25
2235 2274 0.746923 GTCTGATCAGCCATGCAGCA 60.747 55.000 18.36 0.00 34.23 4.41
2236 2275 0.463833 TCTGATCAGCCATGCAGCAG 60.464 55.000 18.36 0.00 34.23 4.24
2237 2276 0.748367 CTGATCAGCCATGCAGCAGT 60.748 55.000 10.38 0.00 34.23 4.40
2238 2277 0.323087 TGATCAGCCATGCAGCAGTT 60.323 50.000 0.00 0.00 34.23 3.16
2239 2278 0.815734 GATCAGCCATGCAGCAGTTT 59.184 50.000 0.00 0.00 34.23 2.66
2240 2279 0.530744 ATCAGCCATGCAGCAGTTTG 59.469 50.000 0.00 0.00 34.23 2.93
2241 2280 1.736645 CAGCCATGCAGCAGTTTGC 60.737 57.895 0.00 0.45 45.46 3.68
2251 2290 1.082104 GCAGTTTGCGTACTGTGGC 60.082 57.895 16.47 0.00 45.76 5.01
2252 2291 1.204062 CAGTTTGCGTACTGTGGCG 59.796 57.895 9.26 0.00 40.48 5.69
2253 2292 1.068417 AGTTTGCGTACTGTGGCGA 59.932 52.632 10.02 1.87 0.00 5.54
2254 2293 0.320421 AGTTTGCGTACTGTGGCGAT 60.320 50.000 10.02 0.00 0.00 4.58
2255 2294 0.179225 GTTTGCGTACTGTGGCGATG 60.179 55.000 10.02 0.00 0.00 3.84
2256 2295 1.295357 TTTGCGTACTGTGGCGATGG 61.295 55.000 10.02 0.00 0.00 3.51
2257 2296 2.161078 TTGCGTACTGTGGCGATGGA 62.161 55.000 10.02 0.00 0.00 3.41
2258 2297 1.878522 GCGTACTGTGGCGATGGAG 60.879 63.158 10.02 0.00 0.00 3.86
2259 2298 1.511305 CGTACTGTGGCGATGGAGT 59.489 57.895 0.00 0.00 0.00 3.85
2260 2299 0.736636 CGTACTGTGGCGATGGAGTA 59.263 55.000 0.00 0.00 0.00 2.59
2261 2300 1.533338 CGTACTGTGGCGATGGAGTAC 60.533 57.143 0.00 0.00 38.17 2.73
2262 2301 1.475280 GTACTGTGGCGATGGAGTACA 59.525 52.381 0.00 0.00 40.28 2.90
2263 2302 0.246635 ACTGTGGCGATGGAGTACAC 59.753 55.000 0.00 0.00 0.00 2.90
2264 2303 0.460284 CTGTGGCGATGGAGTACACC 60.460 60.000 1.82 1.82 0.00 4.16
2265 2304 1.188871 TGTGGCGATGGAGTACACCA 61.189 55.000 14.75 14.75 44.41 4.17
2273 2312 1.623163 TGGAGTACACCATGACGTCA 58.377 50.000 22.48 22.48 34.77 4.35
2274 2313 1.271379 TGGAGTACACCATGACGTCAC 59.729 52.381 22.71 6.15 34.77 3.67
2368 2407 3.419915 CGTGTATAAAGTACACTCGCGT 58.580 45.455 5.77 0.00 44.00 6.01
2383 2422 2.480419 CTCGCGTTCTCATTCTTGGTTT 59.520 45.455 5.77 0.00 0.00 3.27
2384 2423 2.223144 TCGCGTTCTCATTCTTGGTTTG 59.777 45.455 5.77 0.00 0.00 2.93
2418 2457 1.149986 TGGTGTATTTGGGTGGGTGA 58.850 50.000 0.00 0.00 0.00 4.02
2519 2558 6.342111 AGAGAGACTCGATTAATTGGGTTTC 58.658 40.000 15.51 15.51 35.36 2.78
2653 2692 9.927668 CTAAAAATTTGGTCTATGTTTGGATGT 57.072 29.630 0.00 0.00 0.00 3.06
2813 2852 6.424509 CCAAACGTACCTGTAGTTTTCATACA 59.575 38.462 0.00 0.00 36.12 2.29
3032 3071 6.012858 ACAACTGGTAAGTTTATCTGATGGGA 60.013 38.462 0.00 0.00 44.47 4.37
3033 3072 6.240549 ACTGGTAAGTTTATCTGATGGGAG 57.759 41.667 0.00 0.00 30.14 4.30
3034 3073 5.726793 ACTGGTAAGTTTATCTGATGGGAGT 59.273 40.000 0.00 0.00 30.14 3.85
3035 3074 6.901300 ACTGGTAAGTTTATCTGATGGGAGTA 59.099 38.462 0.00 0.00 30.14 2.59
3036 3075 7.120923 TGGTAAGTTTATCTGATGGGAGTAC 57.879 40.000 0.00 0.00 0.00 2.73
3052 3091 3.619038 GGAGTACTGCCTTGATTTTCTCG 59.381 47.826 0.00 0.00 0.00 4.04
3072 3111 9.562583 TTTCTCGTATTTATTTTATGTTGCCAC 57.437 29.630 0.00 0.00 0.00 5.01
3073 3112 7.699566 TCTCGTATTTATTTTATGTTGCCACC 58.300 34.615 0.00 0.00 0.00 4.61
3074 3113 7.554835 TCTCGTATTTATTTTATGTTGCCACCT 59.445 33.333 0.00 0.00 0.00 4.00
3075 3114 8.057536 TCGTATTTATTTTATGTTGCCACCTT 57.942 30.769 0.00 0.00 0.00 3.50
3076 3115 7.971168 TCGTATTTATTTTATGTTGCCACCTTG 59.029 33.333 0.00 0.00 0.00 3.61
3077 3116 7.757624 CGTATTTATTTTATGTTGCCACCTTGT 59.242 33.333 0.00 0.00 0.00 3.16
3078 3117 7.903995 ATTTATTTTATGTTGCCACCTTGTG 57.096 32.000 0.00 0.00 0.00 3.33
3079 3118 4.953940 ATTTTATGTTGCCACCTTGTGT 57.046 36.364 0.00 0.00 0.00 3.72
3080 3119 3.724508 TTTATGTTGCCACCTTGTGTG 57.275 42.857 0.00 0.00 45.01 3.82
3087 3126 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
3088 3127 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
3089 3128 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
3090 3129 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
3091 3130 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
3092 3131 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
3093 3132 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
3094 3133 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
3095 3134 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
3096 3135 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
3097 3136 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
3098 3137 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
3099 3138 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
3100 3139 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
3101 3140 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
3102 3141 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
3103 3142 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
3104 3143 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
3105 3144 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
3106 3145 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
3107 3146 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
3108 3147 1.556911 CTATGCACTGGGTCTGTCCTT 59.443 52.381 0.00 0.00 36.25 3.36
3109 3148 0.773644 ATGCACTGGGTCTGTCCTTT 59.226 50.000 0.00 0.00 36.25 3.11
3110 3149 0.550914 TGCACTGGGTCTGTCCTTTT 59.449 50.000 0.00 0.00 36.25 2.27
3111 3150 1.064017 TGCACTGGGTCTGTCCTTTTT 60.064 47.619 0.00 0.00 36.25 1.94
3273 3314 6.817765 TTTCATCTAAAAACGAGGCAGATT 57.182 33.333 0.00 0.00 0.00 2.40
3312 3353 5.302823 GGATTATTATGCTGCCTCCTTTTGT 59.697 40.000 0.00 0.00 0.00 2.83
3324 3365 4.393371 GCCTCCTTTTGTATCTCACTCAAC 59.607 45.833 0.00 0.00 0.00 3.18
3612 3668 8.793592 ACTGAATTCTGGACTAAAATTGTTACC 58.206 33.333 15.76 0.00 0.00 2.85
3835 3893 8.368668 GTGGCAGTAATAGTACTTGGAATATCT 58.631 37.037 0.00 0.00 38.58 1.98
4052 4110 4.202101 TGTGCTGTCCCTTACAATTTGTTG 60.202 41.667 7.45 1.71 37.74 3.33
4170 4228 3.532641 AAAGGGAAGTTTCTCATGGCT 57.467 42.857 0.00 0.00 0.00 4.75
4279 4337 3.244911 GGGGAAACTGAGGTGAGAATTCA 60.245 47.826 8.44 0.00 0.00 2.57
4300 4358 4.395854 TCAACATGGCTGCACTTACATTAG 59.604 41.667 0.50 0.00 0.00 1.73
4305 4363 2.359900 GCTGCACTTACATTAGCCTGT 58.640 47.619 0.00 0.00 0.00 4.00
4421 4479 2.633481 GGAACACACTTAGGTCCTCAGT 59.367 50.000 0.00 0.00 0.00 3.41
4423 4481 2.679082 ACACACTTAGGTCCTCAGTGT 58.321 47.619 26.68 26.68 45.94 3.55
4503 6026 7.556275 ACCACTTCTTCACTTTGTATCTTTTCA 59.444 33.333 0.00 0.00 0.00 2.69
4568 6091 5.763088 TGCATCGTTTACAATACTGCAAAA 58.237 33.333 0.00 0.00 35.42 2.44
4593 6116 1.619654 CTTTTGACCTGGTGGCATGA 58.380 50.000 2.82 0.00 36.63 3.07
4703 6227 7.772332 TGTCTTGAGACTCTAAACTTTTGAC 57.228 36.000 12.00 0.00 44.99 3.18
5445 6979 2.285969 ACTCCCAGCCATGCCTCT 60.286 61.111 0.00 0.00 0.00 3.69
5480 7014 6.346896 AGTAGTCATCAGAGACACGTACATA 58.653 40.000 0.00 0.00 40.98 2.29
5528 7216 8.081633 TCAGCTGTCTTAAAATACATTTGGTTG 58.918 33.333 14.67 0.00 32.27 3.77
5545 7233 0.247185 TTGCTGGCATTAGGCTTTGC 59.753 50.000 12.26 12.26 44.01 3.68
5568 7256 0.536460 AACACGGGTGAATGGGTGAC 60.536 55.000 5.71 0.00 34.59 3.67
5599 7287 4.808414 TCACTCCGATCAAGATGAACTT 57.192 40.909 0.00 0.00 39.70 2.66
5607 7295 6.070767 TCCGATCAAGATGAACTTTTCCTAGT 60.071 38.462 0.00 0.00 36.61 2.57
6059 7756 1.411493 CTAGTCGGCGTTTCGGAAGC 61.411 60.000 6.85 0.00 0.00 3.86
6068 7765 2.474691 GCGTTTCGGAAGCAGAAGAATC 60.475 50.000 5.44 0.00 0.00 2.52
6138 7835 4.220602 ACAAATACAACCTGCTCAAATCCC 59.779 41.667 0.00 0.00 0.00 3.85
6233 7930 1.304134 GTTTCGGAAGCCCATGGGT 60.304 57.895 31.58 13.70 37.65 4.51
6452 8149 3.944476 GATGGATTATCGGCAGCCT 57.056 52.632 10.54 0.00 0.00 4.58
6506 8203 1.526575 GCAGCTTTGGCACCAAGCTA 61.527 55.000 22.27 0.38 44.79 3.32
6538 8235 0.961753 AGCGATATGGTGATGCTCGA 59.038 50.000 0.00 0.00 0.00 4.04
6570 8267 2.672996 GGTTGGCGCAGTGGATGT 60.673 61.111 10.83 0.00 0.00 3.06
6597 8294 0.039437 GAGTCTTGTTGCGTCTCGGA 60.039 55.000 0.00 0.00 0.00 4.55
6598 8295 0.318784 AGTCTTGTTGCGTCTCGGAC 60.319 55.000 0.00 0.00 0.00 4.79
6599 8296 0.318784 GTCTTGTTGCGTCTCGGACT 60.319 55.000 3.15 0.00 0.00 3.85
6600 8297 0.039437 TCTTGTTGCGTCTCGGACTC 60.039 55.000 3.15 0.00 0.00 3.36
6601 8298 0.039074 CTTGTTGCGTCTCGGACTCT 60.039 55.000 3.15 0.00 0.00 3.24
6602 8299 0.039437 TTGTTGCGTCTCGGACTCTC 60.039 55.000 3.15 0.00 0.00 3.20
6603 8300 1.512310 GTTGCGTCTCGGACTCTCG 60.512 63.158 3.15 0.00 0.00 4.04
6604 8301 2.687805 TTGCGTCTCGGACTCTCGG 61.688 63.158 3.15 0.00 0.00 4.63
6723 8423 6.919721 TGAATGTATTTAGTTCCAACAAGGC 58.080 36.000 0.00 0.00 37.29 4.35
6727 8427 6.919721 TGTATTTAGTTCCAACAAGGCAATC 58.080 36.000 0.00 0.00 37.29 2.67
6748 8448 4.890088 TCGTGCTGTATAAAGTTTCACCT 58.110 39.130 0.00 0.00 0.00 4.00
6825 8525 1.406069 CGCACTTTCTCCTACCTGCAT 60.406 52.381 0.00 0.00 0.00 3.96
6832 8532 0.179062 CTCCTACCTGCATGTCAGCC 60.179 60.000 0.00 0.00 41.50 4.85
6846 8546 0.826715 TCAGCCGAGGAGAAAGATGG 59.173 55.000 0.00 0.00 0.00 3.51
6850 8550 0.826715 CCGAGGAGAAAGATGGAGCA 59.173 55.000 0.00 0.00 0.00 4.26
6883 8583 8.736244 TGGTATGAAGTCTTTAATTTAAGGTGC 58.264 33.333 4.48 0.00 0.00 5.01
6884 8584 8.957466 GGTATGAAGTCTTTAATTTAAGGTGCT 58.043 33.333 4.48 0.00 0.00 4.40
6885 8585 9.774742 GTATGAAGTCTTTAATTTAAGGTGCTG 57.225 33.333 4.48 0.00 0.00 4.41
6886 8586 8.635765 ATGAAGTCTTTAATTTAAGGTGCTGA 57.364 30.769 4.48 0.00 0.00 4.26
6887 8587 8.099364 TGAAGTCTTTAATTTAAGGTGCTGAG 57.901 34.615 4.48 0.00 0.00 3.35
6888 8588 7.174946 TGAAGTCTTTAATTTAAGGTGCTGAGG 59.825 37.037 4.48 0.00 0.00 3.86
6889 8589 6.543735 AGTCTTTAATTTAAGGTGCTGAGGT 58.456 36.000 4.48 0.00 0.00 3.85
6890 8590 7.686434 AGTCTTTAATTTAAGGTGCTGAGGTA 58.314 34.615 4.48 0.00 0.00 3.08
6899 8685 3.031736 AGGTGCTGAGGTAATCGTACAT 58.968 45.455 0.00 0.00 31.21 2.29
6926 8712 4.083961 GCGACAATTCAGAGATCCATCATG 60.084 45.833 0.00 0.00 0.00 3.07
6927 8713 5.055144 CGACAATTCAGAGATCCATCATGT 58.945 41.667 0.00 0.00 0.00 3.21
6929 8715 6.145209 CGACAATTCAGAGATCCATCATGTAC 59.855 42.308 0.00 0.00 0.00 2.90
6930 8716 7.134362 ACAATTCAGAGATCCATCATGTACT 57.866 36.000 0.00 0.00 0.00 2.73
6985 8792 1.062148 GACGAAGCCATACTTTTCCGC 59.938 52.381 0.00 0.00 39.29 5.54
7031 8838 1.272092 CCTCAAACCAAGCAGGGATCA 60.272 52.381 0.10 0.00 43.89 2.92
7036 8843 1.075601 ACCAAGCAGGGATCAAAGGA 58.924 50.000 0.10 0.00 43.89 3.36
7051 8871 6.039159 GGATCAAAGGAAAAATGTGGCAAAAA 59.961 34.615 0.00 0.00 0.00 1.94
7087 8907 6.042777 ACAACCGTGATTCACTATAGTCATG 58.957 40.000 14.54 3.67 31.34 3.07
7099 8925 7.492524 TCACTATAGTCATGGTCATGTTCTTC 58.507 38.462 1.26 0.03 39.72 2.87
7106 8932 4.019051 TCATGGTCATGTTCTTCCATCACT 60.019 41.667 10.32 0.00 38.43 3.41
7116 8942 7.873719 TGTTCTTCCATCACTACAAGAAAAA 57.126 32.000 0.00 0.00 36.79 1.94
7118 8944 7.013274 TGTTCTTCCATCACTACAAGAAAAAGG 59.987 37.037 0.00 0.00 36.79 3.11
7119 8945 5.473504 TCTTCCATCACTACAAGAAAAAGGC 59.526 40.000 0.00 0.00 0.00 4.35
7120 8946 4.079253 TCCATCACTACAAGAAAAAGGCC 58.921 43.478 0.00 0.00 0.00 5.19
7121 8947 4.082125 CCATCACTACAAGAAAAAGGCCT 58.918 43.478 0.00 0.00 0.00 5.19
7122 8948 5.013704 TCCATCACTACAAGAAAAAGGCCTA 59.986 40.000 5.16 0.00 0.00 3.93
7123 8949 5.710099 CCATCACTACAAGAAAAAGGCCTAA 59.290 40.000 5.16 0.00 0.00 2.69
7124 8950 6.349363 CCATCACTACAAGAAAAAGGCCTAAC 60.349 42.308 5.16 0.00 0.00 2.34
7125 8951 4.753107 TCACTACAAGAAAAAGGCCTAACG 59.247 41.667 5.16 0.00 0.00 3.18
7126 8952 3.501062 ACTACAAGAAAAAGGCCTAACGC 59.499 43.478 5.16 0.00 0.00 4.84
7160 8986 1.746787 TGATACTATCACCGTGCGTGT 59.253 47.619 0.00 0.00 43.51 4.49
7161 8987 2.223409 TGATACTATCACCGTGCGTGTC 60.223 50.000 0.00 0.39 43.51 3.67
7173 9003 1.375908 GCGTGTCCTTCCATCAGCA 60.376 57.895 0.00 0.00 0.00 4.41
7197 9027 4.349342 AGAAGCTGAGAAGGGAAAAGAAGA 59.651 41.667 0.00 0.00 0.00 2.87
7216 9046 6.000840 AGAAGAAAAGGAAGGCTTCTACTTG 58.999 40.000 25.25 0.00 43.68 3.16
7217 9047 4.075682 AGAAAAGGAAGGCTTCTACTTGC 58.924 43.478 25.25 14.64 36.65 4.01
7219 9049 3.728385 AAGGAAGGCTTCTACTTGCAT 57.272 42.857 25.25 0.00 38.55 3.96
7221 9051 2.092699 AGGAAGGCTTCTACTTGCATCC 60.093 50.000 25.25 6.81 38.55 3.51
7224 9054 3.205784 AGGCTTCTACTTGCATCCATC 57.794 47.619 0.00 0.00 0.00 3.51
7236 9066 0.312416 CATCCATCGTCTCTCCGACC 59.688 60.000 0.00 0.00 40.08 4.79
7271 9103 1.522355 CTCCTAGTCGTCGGCGGTA 60.522 63.158 10.62 0.23 38.89 4.02
7286 9118 3.009115 GTACTGCTGGCCCTCCCA 61.009 66.667 0.00 0.00 42.79 4.37
7378 9210 2.203167 AGCCGCCTCATCTGCATG 60.203 61.111 0.00 0.00 0.00 4.06
7383 9215 2.593725 CCTCATCTGCATGCCGGG 60.594 66.667 16.68 5.64 0.00 5.73
7387 9219 0.611618 TCATCTGCATGCCGGGTTTT 60.612 50.000 16.68 0.00 0.00 2.43
7391 9223 0.109319 CTGCATGCCGGGTTTTGTAC 60.109 55.000 16.68 0.00 0.00 2.90
7392 9224 0.823769 TGCATGCCGGGTTTTGTACA 60.824 50.000 16.68 0.00 0.00 2.90
7393 9225 0.388006 GCATGCCGGGTTTTGTACAC 60.388 55.000 6.36 0.00 0.00 2.90
7394 9226 0.955178 CATGCCGGGTTTTGTACACA 59.045 50.000 2.18 0.00 0.00 3.72
7395 9227 1.338337 CATGCCGGGTTTTGTACACAA 59.662 47.619 2.18 0.00 0.00 3.33
7396 9228 1.693627 TGCCGGGTTTTGTACACAAT 58.306 45.000 2.18 0.00 35.55 2.71
7397 9229 1.609555 TGCCGGGTTTTGTACACAATC 59.390 47.619 2.18 0.00 35.55 2.67
7399 9231 2.034812 GCCGGGTTTTGTACACAATCAA 59.965 45.455 2.18 0.00 35.55 2.57
7400 9232 3.305744 GCCGGGTTTTGTACACAATCAAT 60.306 43.478 2.18 0.00 35.55 2.57
7446 9286 5.211454 CAGTGCTAGACATGTTAGATCGAG 58.789 45.833 15.12 4.02 0.00 4.04
7447 9287 4.277174 AGTGCTAGACATGTTAGATCGAGG 59.723 45.833 15.12 0.00 0.00 4.63
7448 9288 4.276183 GTGCTAGACATGTTAGATCGAGGA 59.724 45.833 15.12 1.76 0.00 3.71
7449 9289 4.517075 TGCTAGACATGTTAGATCGAGGAG 59.483 45.833 15.12 0.00 0.00 3.69
7451 9291 3.904717 AGACATGTTAGATCGAGGAGGT 58.095 45.455 0.00 0.00 0.00 3.85
7453 9293 5.446860 AGACATGTTAGATCGAGGAGGTAA 58.553 41.667 0.00 0.00 0.00 2.85
7454 9294 6.071984 AGACATGTTAGATCGAGGAGGTAAT 58.928 40.000 0.00 0.00 0.00 1.89
7455 9295 6.551601 AGACATGTTAGATCGAGGAGGTAATT 59.448 38.462 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
322 326 2.029964 GTCCGACAGCCCGAACAA 59.970 61.111 0.00 0.00 0.00 2.83
425 429 3.728373 GGCCCACCCCGAAGATGT 61.728 66.667 0.00 0.00 0.00 3.06
630 635 0.955428 TCACAGCTCGTCAATTGGCC 60.955 55.000 4.07 0.00 0.00 5.36
639 644 1.376424 CAGGCCAATCACAGCTCGT 60.376 57.895 5.01 0.00 0.00 4.18
712 717 7.094205 ACAATGTGATGATTTAGTCCCAAAGTC 60.094 37.037 0.00 0.00 0.00 3.01
739 744 1.564348 CCCAGGTACCCTAACTTGCAT 59.436 52.381 8.74 0.00 29.64 3.96
802 807 1.597854 CATCACTGTGGTGCGTGGT 60.598 57.895 8.30 0.00 42.72 4.16
1039 1049 2.039137 GTCCTCCTTCTCCCCCGT 59.961 66.667 0.00 0.00 0.00 5.28
1040 1050 3.148279 CGTCCTCCTTCTCCCCCG 61.148 72.222 0.00 0.00 0.00 5.73
1043 1065 3.471806 GCCCGTCCTCCTTCTCCC 61.472 72.222 0.00 0.00 0.00 4.30
1095 1117 2.441164 GAGAGGAGCTCCGGCAGA 60.441 66.667 26.95 0.00 42.08 4.26
1305 1342 1.819632 CGGGTATGAGGGCACAAGC 60.820 63.158 0.00 0.00 41.10 4.01
1306 1343 0.462047 GACGGGTATGAGGGCACAAG 60.462 60.000 0.00 0.00 0.00 3.16
1307 1344 1.600107 GACGGGTATGAGGGCACAA 59.400 57.895 0.00 0.00 0.00 3.33
1367 1404 1.380380 GGGATTTCCACAGCCCTGG 60.380 63.158 0.00 0.00 37.59 4.45
1506 1545 0.179086 TGTCGCTCAAGCTTCACACA 60.179 50.000 0.00 0.00 39.32 3.72
1568 1607 7.736447 ACAAGCAACCTTATTAGCATCTATC 57.264 36.000 0.00 0.00 0.00 2.08
1880 1919 5.163447 CCCTCCGTTCACAAGTATAAGATGA 60.163 44.000 0.00 0.00 0.00 2.92
1929 1968 4.657436 AGGTCAGCGAGAATAGGTTTAG 57.343 45.455 0.00 0.00 0.00 1.85
1933 1972 3.322254 CCATAAGGTCAGCGAGAATAGGT 59.678 47.826 0.00 0.00 0.00 3.08
1959 1998 1.839747 AGACGGTGTGGTGCCCTTA 60.840 57.895 0.00 0.00 0.00 2.69
1993 2032 0.320421 ATCGCCACAGTACGCAAACT 60.320 50.000 0.00 0.00 0.00 2.66
2033 2072 0.178953 AAGCAGCACCCCACTTTCAT 60.179 50.000 0.00 0.00 0.00 2.57
2034 2073 0.396974 AAAGCAGCACCCCACTTTCA 60.397 50.000 0.00 0.00 0.00 2.69
2035 2074 0.752658 AAAAGCAGCACCCCACTTTC 59.247 50.000 0.00 0.00 31.37 2.62
2036 2075 2.080654 TAAAAGCAGCACCCCACTTT 57.919 45.000 0.00 0.00 33.92 2.66
2037 2076 2.171003 GATAAAAGCAGCACCCCACTT 58.829 47.619 0.00 0.00 0.00 3.16
2038 2077 1.355720 AGATAAAAGCAGCACCCCACT 59.644 47.619 0.00 0.00 0.00 4.00
2039 2078 1.839424 AGATAAAAGCAGCACCCCAC 58.161 50.000 0.00 0.00 0.00 4.61
2040 2079 3.730215 TTAGATAAAAGCAGCACCCCA 57.270 42.857 0.00 0.00 0.00 4.96
2041 2080 5.127031 TGATTTTAGATAAAAGCAGCACCCC 59.873 40.000 10.96 0.00 43.86 4.95
2042 2081 6.207691 TGATTTTAGATAAAAGCAGCACCC 57.792 37.500 10.96 0.00 43.86 4.61
2063 2102 9.942850 TGAAATGAGTGAACAAGTATAAGATGA 57.057 29.630 0.00 0.00 0.00 2.92
2065 2104 9.950496 ACTGAAATGAGTGAACAAGTATAAGAT 57.050 29.630 0.00 0.00 0.00 2.40
2066 2105 9.424319 GACTGAAATGAGTGAACAAGTATAAGA 57.576 33.333 0.00 0.00 0.00 2.10
2067 2106 8.660373 GGACTGAAATGAGTGAACAAGTATAAG 58.340 37.037 0.00 0.00 0.00 1.73
2068 2107 8.375506 AGGACTGAAATGAGTGAACAAGTATAA 58.624 33.333 0.00 0.00 0.00 0.98
2069 2108 7.907389 AGGACTGAAATGAGTGAACAAGTATA 58.093 34.615 0.00 0.00 0.00 1.47
2070 2109 6.773638 AGGACTGAAATGAGTGAACAAGTAT 58.226 36.000 0.00 0.00 0.00 2.12
2071 2110 6.174720 AGGACTGAAATGAGTGAACAAGTA 57.825 37.500 0.00 0.00 0.00 2.24
2072 2111 5.041191 AGGACTGAAATGAGTGAACAAGT 57.959 39.130 0.00 0.00 0.00 3.16
2073 2112 5.059161 TGAGGACTGAAATGAGTGAACAAG 58.941 41.667 0.00 0.00 0.00 3.16
2074 2113 5.034852 TGAGGACTGAAATGAGTGAACAA 57.965 39.130 0.00 0.00 0.00 2.83
2075 2114 4.687901 TGAGGACTGAAATGAGTGAACA 57.312 40.909 0.00 0.00 0.00 3.18
2076 2115 4.999950 ACATGAGGACTGAAATGAGTGAAC 59.000 41.667 0.00 0.00 0.00 3.18
2077 2116 5.233083 ACATGAGGACTGAAATGAGTGAA 57.767 39.130 0.00 0.00 0.00 3.18
2078 2117 4.897509 ACATGAGGACTGAAATGAGTGA 57.102 40.909 0.00 0.00 0.00 3.41
2079 2118 5.728471 ACTACATGAGGACTGAAATGAGTG 58.272 41.667 0.00 0.00 0.00 3.51
2080 2119 6.437477 TGTACTACATGAGGACTGAAATGAGT 59.563 38.462 0.00 0.00 40.13 3.41
2081 2120 6.867550 TGTACTACATGAGGACTGAAATGAG 58.132 40.000 0.00 0.00 40.13 2.90
2082 2121 6.850752 TGTACTACATGAGGACTGAAATGA 57.149 37.500 0.00 0.00 40.13 2.57
2083 2122 9.770097 AATATGTACTACATGAGGACTGAAATG 57.230 33.333 11.39 0.00 40.13 2.32
2084 2123 9.770097 CAATATGTACTACATGAGGACTGAAAT 57.230 33.333 11.39 0.00 40.13 2.17
2085 2124 8.977412 TCAATATGTACTACATGAGGACTGAAA 58.023 33.333 11.39 0.00 40.13 2.69
2086 2125 8.533569 TCAATATGTACTACATGAGGACTGAA 57.466 34.615 11.39 0.00 40.13 3.02
2087 2126 8.533569 TTCAATATGTACTACATGAGGACTGA 57.466 34.615 11.39 0.00 40.13 3.41
2088 2127 9.770097 ATTTCAATATGTACTACATGAGGACTG 57.230 33.333 11.39 0.00 40.13 3.51
2116 2155 9.529325 CCGTTCACAAGTATAAGATGATTTAGA 57.471 33.333 0.00 0.00 0.00 2.10
2117 2156 9.529325 TCCGTTCACAAGTATAAGATGATTTAG 57.471 33.333 0.00 0.00 0.00 1.85
2118 2157 9.529325 CTCCGTTCACAAGTATAAGATGATTTA 57.471 33.333 0.00 0.00 0.00 1.40
2119 2158 7.495934 CCTCCGTTCACAAGTATAAGATGATTT 59.504 37.037 0.00 0.00 0.00 2.17
2120 2159 6.986817 CCTCCGTTCACAAGTATAAGATGATT 59.013 38.462 0.00 0.00 0.00 2.57
2121 2160 6.463049 CCCTCCGTTCACAAGTATAAGATGAT 60.463 42.308 0.00 0.00 0.00 2.45
2122 2161 5.163447 CCCTCCGTTCACAAGTATAAGATGA 60.163 44.000 0.00 0.00 0.00 2.92
2123 2162 5.050490 CCCTCCGTTCACAAGTATAAGATG 58.950 45.833 0.00 0.00 0.00 2.90
2124 2163 4.960469 TCCCTCCGTTCACAAGTATAAGAT 59.040 41.667 0.00 0.00 0.00 2.40
2125 2164 4.346730 TCCCTCCGTTCACAAGTATAAGA 58.653 43.478 0.00 0.00 0.00 2.10
2126 2165 4.159879 ACTCCCTCCGTTCACAAGTATAAG 59.840 45.833 0.00 0.00 0.00 1.73
2127 2166 4.091549 ACTCCCTCCGTTCACAAGTATAA 58.908 43.478 0.00 0.00 0.00 0.98
2128 2167 3.705051 ACTCCCTCCGTTCACAAGTATA 58.295 45.455 0.00 0.00 0.00 1.47
2129 2168 2.537143 ACTCCCTCCGTTCACAAGTAT 58.463 47.619 0.00 0.00 0.00 2.12
2130 2169 2.005370 ACTCCCTCCGTTCACAAGTA 57.995 50.000 0.00 0.00 0.00 2.24
2131 2170 1.617357 GTACTCCCTCCGTTCACAAGT 59.383 52.381 0.00 0.00 0.00 3.16
2132 2171 1.067071 GGTACTCCCTCCGTTCACAAG 60.067 57.143 0.00 0.00 0.00 3.16
2133 2172 0.971386 GGTACTCCCTCCGTTCACAA 59.029 55.000 0.00 0.00 0.00 3.33
2134 2173 0.178955 TGGTACTCCCTCCGTTCACA 60.179 55.000 0.00 0.00 0.00 3.58
2135 2174 1.192428 ATGGTACTCCCTCCGTTCAC 58.808 55.000 0.00 0.00 0.00 3.18
2136 2175 1.946984 AATGGTACTCCCTCCGTTCA 58.053 50.000 0.00 0.00 0.00 3.18
2137 2176 3.345508 AAAATGGTACTCCCTCCGTTC 57.654 47.619 0.00 0.00 32.55 3.95
2138 2177 4.098894 TCTAAAATGGTACTCCCTCCGTT 58.901 43.478 0.00 0.00 34.83 4.44
2139 2178 3.716431 TCTAAAATGGTACTCCCTCCGT 58.284 45.455 0.00 0.00 0.00 4.69
2140 2179 4.957684 ATCTAAAATGGTACTCCCTCCG 57.042 45.455 0.00 0.00 0.00 4.63
2141 2180 8.272889 ACTTTTATCTAAAATGGTACTCCCTCC 58.727 37.037 0.00 0.00 34.95 4.30
2142 2181 9.110502 CACTTTTATCTAAAATGGTACTCCCTC 57.889 37.037 0.00 0.00 34.95 4.30
2143 2182 7.556635 GCACTTTTATCTAAAATGGTACTCCCT 59.443 37.037 0.00 0.00 34.95 4.20
2144 2183 7.201794 GGCACTTTTATCTAAAATGGTACTCCC 60.202 40.741 0.00 0.00 34.95 4.30
2145 2184 7.201794 GGGCACTTTTATCTAAAATGGTACTCC 60.202 40.741 0.00 0.00 34.95 3.85
2146 2185 7.556635 AGGGCACTTTTATCTAAAATGGTACTC 59.443 37.037 0.00 0.00 34.95 2.59
2147 2186 7.410991 AGGGCACTTTTATCTAAAATGGTACT 58.589 34.615 0.00 0.00 34.95 2.73
2148 2187 7.640597 AGGGCACTTTTATCTAAAATGGTAC 57.359 36.000 0.00 0.00 34.95 3.34
2149 2188 9.756571 TTTAGGGCACTTTTATCTAAAATGGTA 57.243 29.630 0.00 0.00 34.95 3.25
2150 2189 8.528643 GTTTAGGGCACTTTTATCTAAAATGGT 58.471 33.333 0.00 0.00 34.95 3.55
2151 2190 7.979537 GGTTTAGGGCACTTTTATCTAAAATGG 59.020 37.037 0.00 0.00 34.95 3.16
2152 2191 8.749354 AGGTTTAGGGCACTTTTATCTAAAATG 58.251 33.333 0.00 0.26 34.95 2.32
2153 2192 8.895141 AGGTTTAGGGCACTTTTATCTAAAAT 57.105 30.769 0.00 0.00 34.95 1.82
2154 2193 9.984590 ATAGGTTTAGGGCACTTTTATCTAAAA 57.015 29.630 0.00 0.00 33.49 1.52
2155 2194 9.984590 AATAGGTTTAGGGCACTTTTATCTAAA 57.015 29.630 0.00 0.00 0.00 1.85
2156 2195 9.623000 GAATAGGTTTAGGGCACTTTTATCTAA 57.377 33.333 0.00 0.00 0.00 2.10
2157 2196 8.999895 AGAATAGGTTTAGGGCACTTTTATCTA 58.000 33.333 0.00 0.00 0.00 1.98
2158 2197 7.775561 CAGAATAGGTTTAGGGCACTTTTATCT 59.224 37.037 0.00 0.00 0.00 1.98
2159 2198 7.013369 CCAGAATAGGTTTAGGGCACTTTTATC 59.987 40.741 0.00 0.00 0.00 1.75
2160 2199 6.833933 CCAGAATAGGTTTAGGGCACTTTTAT 59.166 38.462 0.00 0.00 0.00 1.40
2161 2200 6.184789 CCAGAATAGGTTTAGGGCACTTTTA 58.815 40.000 0.00 0.00 0.00 1.52
2162 2201 5.016831 CCAGAATAGGTTTAGGGCACTTTT 58.983 41.667 0.00 0.00 0.00 2.27
2163 2202 4.600062 CCAGAATAGGTTTAGGGCACTTT 58.400 43.478 0.00 0.00 0.00 2.66
2164 2203 3.624959 GCCAGAATAGGTTTAGGGCACTT 60.625 47.826 0.00 0.00 39.66 3.16
2165 2204 2.092375 GCCAGAATAGGTTTAGGGCACT 60.092 50.000 0.00 0.00 39.66 4.40
2166 2205 2.092375 AGCCAGAATAGGTTTAGGGCAC 60.092 50.000 0.00 0.00 42.26 5.01
2167 2206 2.092429 CAGCCAGAATAGGTTTAGGGCA 60.092 50.000 0.00 0.00 42.26 5.36
2168 2207 2.172717 TCAGCCAGAATAGGTTTAGGGC 59.827 50.000 0.00 0.00 40.18 5.19
2169 2208 4.349342 AGATCAGCCAGAATAGGTTTAGGG 59.651 45.833 0.00 0.00 0.00 3.53
2170 2209 5.559148 AGATCAGCCAGAATAGGTTTAGG 57.441 43.478 0.00 0.00 0.00 2.69
2171 2210 7.605691 CCATAAGATCAGCCAGAATAGGTTTAG 59.394 40.741 0.00 0.00 0.00 1.85
2172 2211 7.072454 ACCATAAGATCAGCCAGAATAGGTTTA 59.928 37.037 0.00 0.00 0.00 2.01
2173 2212 6.126361 ACCATAAGATCAGCCAGAATAGGTTT 60.126 38.462 0.00 0.00 0.00 3.27
2174 2213 5.370880 ACCATAAGATCAGCCAGAATAGGTT 59.629 40.000 0.00 0.00 0.00 3.50
2175 2214 4.910304 ACCATAAGATCAGCCAGAATAGGT 59.090 41.667 0.00 0.00 0.00 3.08
2176 2215 5.243981 CACCATAAGATCAGCCAGAATAGG 58.756 45.833 0.00 0.00 0.00 2.57
2177 2216 4.694509 GCACCATAAGATCAGCCAGAATAG 59.305 45.833 0.00 0.00 0.00 1.73
2178 2217 4.349048 AGCACCATAAGATCAGCCAGAATA 59.651 41.667 0.00 0.00 0.00 1.75
2179 2218 3.137913 AGCACCATAAGATCAGCCAGAAT 59.862 43.478 0.00 0.00 0.00 2.40
2180 2219 2.507058 AGCACCATAAGATCAGCCAGAA 59.493 45.455 0.00 0.00 0.00 3.02
2181 2220 2.121948 AGCACCATAAGATCAGCCAGA 58.878 47.619 0.00 0.00 0.00 3.86
2182 2221 2.634815 AGCACCATAAGATCAGCCAG 57.365 50.000 0.00 0.00 0.00 4.85
2183 2222 3.181451 CCTTAGCACCATAAGATCAGCCA 60.181 47.826 0.00 0.00 35.19 4.75
2184 2223 3.406764 CCTTAGCACCATAAGATCAGCC 58.593 50.000 0.00 0.00 35.19 4.85
2185 2224 3.406764 CCCTTAGCACCATAAGATCAGC 58.593 50.000 0.00 0.00 35.19 4.26
2186 2225 3.406764 GCCCTTAGCACCATAAGATCAG 58.593 50.000 0.00 0.00 42.97 2.90
2187 2226 3.492102 GCCCTTAGCACCATAAGATCA 57.508 47.619 0.00 0.00 42.97 2.92
2199 2238 2.746277 CGGTGTGGTGCCCTTAGC 60.746 66.667 0.00 0.00 44.14 3.09
2200 2239 1.375523 GACGGTGTGGTGCCCTTAG 60.376 63.158 0.00 0.00 0.00 2.18
2201 2240 1.839747 AGACGGTGTGGTGCCCTTA 60.840 57.895 0.00 0.00 0.00 2.69
2202 2241 3.168528 AGACGGTGTGGTGCCCTT 61.169 61.111 0.00 0.00 0.00 3.95
2203 2242 3.941188 CAGACGGTGTGGTGCCCT 61.941 66.667 0.00 0.00 0.00 5.19
2204 2243 3.254024 ATCAGACGGTGTGGTGCCC 62.254 63.158 5.37 0.00 0.00 5.36
2205 2244 1.741770 GATCAGACGGTGTGGTGCC 60.742 63.158 5.37 0.00 0.00 5.01
2206 2245 1.005037 TGATCAGACGGTGTGGTGC 60.005 57.895 5.37 0.00 0.00 5.01
2207 2246 1.016130 GCTGATCAGACGGTGTGGTG 61.016 60.000 27.04 0.00 0.00 4.17
2208 2247 1.293498 GCTGATCAGACGGTGTGGT 59.707 57.895 27.04 0.00 0.00 4.16
2209 2248 1.448540 GGCTGATCAGACGGTGTGG 60.449 63.158 27.04 0.00 0.00 4.17
2210 2249 0.107993 ATGGCTGATCAGACGGTGTG 60.108 55.000 27.04 0.00 40.06 3.82
2211 2250 0.107993 CATGGCTGATCAGACGGTGT 60.108 55.000 27.04 8.28 40.06 4.16
2212 2251 1.434622 GCATGGCTGATCAGACGGTG 61.435 60.000 27.04 24.59 40.06 4.94
2213 2252 1.153289 GCATGGCTGATCAGACGGT 60.153 57.895 27.04 13.61 40.06 4.83
2214 2253 1.153309 TGCATGGCTGATCAGACGG 60.153 57.895 27.04 19.96 40.06 4.79
2215 2254 1.773054 GCTGCATGGCTGATCAGACG 61.773 60.000 27.04 12.92 40.06 4.18
2216 2255 0.746923 TGCTGCATGGCTGATCAGAC 60.747 55.000 27.04 24.81 36.85 3.51
2217 2256 0.463833 CTGCTGCATGGCTGATCAGA 60.464 55.000 27.04 6.75 33.89 3.27
2218 2257 0.748367 ACTGCTGCATGGCTGATCAG 60.748 55.000 18.84 18.84 35.59 2.90
2219 2258 0.323087 AACTGCTGCATGGCTGATCA 60.323 50.000 1.31 0.00 35.59 2.92
2220 2259 0.815734 AAACTGCTGCATGGCTGATC 59.184 50.000 1.31 0.00 35.59 2.92
2221 2260 0.530744 CAAACTGCTGCATGGCTGAT 59.469 50.000 1.31 0.00 35.59 2.90
2222 2261 1.961378 CAAACTGCTGCATGGCTGA 59.039 52.632 1.31 0.00 35.59 4.26
2223 2262 1.736645 GCAAACTGCTGCATGGCTG 60.737 57.895 1.31 3.68 42.17 4.85
2224 2263 2.654877 GCAAACTGCTGCATGGCT 59.345 55.556 1.31 0.00 42.17 4.75
2225 2264 2.198906 TACGCAAACTGCTGCATGGC 62.199 55.000 1.31 3.89 42.25 4.40
2226 2265 0.454957 GTACGCAAACTGCTGCATGG 60.455 55.000 1.31 0.00 42.25 3.66
2227 2266 0.518636 AGTACGCAAACTGCTGCATG 59.481 50.000 1.31 0.00 42.25 4.06
2228 2267 0.518636 CAGTACGCAAACTGCTGCAT 59.481 50.000 1.31 0.00 42.25 3.96
2229 2268 1.941072 CAGTACGCAAACTGCTGCA 59.059 52.632 0.88 0.88 42.25 4.41
2230 2269 4.826600 CAGTACGCAAACTGCTGC 57.173 55.556 2.76 0.00 42.25 5.25
2235 2274 0.320421 ATCGCCACAGTACGCAAACT 60.320 50.000 0.00 0.00 0.00 2.66
2236 2275 0.179225 CATCGCCACAGTACGCAAAC 60.179 55.000 0.00 0.00 0.00 2.93
2237 2276 1.295357 CCATCGCCACAGTACGCAAA 61.295 55.000 0.00 0.00 0.00 3.68
2238 2277 1.739929 CCATCGCCACAGTACGCAA 60.740 57.895 0.00 0.00 0.00 4.85
2239 2278 2.125713 CCATCGCCACAGTACGCA 60.126 61.111 0.00 0.00 0.00 5.24
2240 2279 1.878522 CTCCATCGCCACAGTACGC 60.879 63.158 0.00 0.00 0.00 4.42
2241 2280 0.736636 TACTCCATCGCCACAGTACG 59.263 55.000 0.00 0.00 0.00 3.67
2242 2281 1.475280 TGTACTCCATCGCCACAGTAC 59.525 52.381 0.00 0.00 41.06 2.73
2243 2282 1.475280 GTGTACTCCATCGCCACAGTA 59.525 52.381 0.00 0.00 0.00 2.74
2244 2283 0.246635 GTGTACTCCATCGCCACAGT 59.753 55.000 0.00 0.00 0.00 3.55
2245 2284 0.460284 GGTGTACTCCATCGCCACAG 60.460 60.000 9.12 0.00 34.73 3.66
2246 2285 1.188871 TGGTGTACTCCATCGCCACA 61.189 55.000 12.62 0.00 38.97 4.17
2247 2286 0.178068 ATGGTGTACTCCATCGCCAC 59.822 55.000 21.18 0.00 43.85 5.01
2248 2287 0.177836 CATGGTGTACTCCATCGCCA 59.822 55.000 23.46 5.06 45.23 5.69
2249 2288 0.464036 TCATGGTGTACTCCATCGCC 59.536 55.000 23.46 0.00 45.23 5.54
2250 2289 1.571919 GTCATGGTGTACTCCATCGC 58.428 55.000 23.46 15.93 45.23 4.58
2251 2290 1.134367 ACGTCATGGTGTACTCCATCG 59.866 52.381 23.46 24.29 45.23 3.84
2252 2291 2.165641 TGACGTCATGGTGTACTCCATC 59.834 50.000 23.46 14.88 45.23 3.51
2254 2293 1.271379 GTGACGTCATGGTGTACTCCA 59.729 52.381 23.12 18.47 42.01 3.86
2255 2294 1.271379 TGTGACGTCATGGTGTACTCC 59.729 52.381 23.12 7.03 0.00 3.85
2256 2295 2.717580 TGTGACGTCATGGTGTACTC 57.282 50.000 23.12 5.78 0.00 2.59
2257 2296 2.560981 TCATGTGACGTCATGGTGTACT 59.439 45.455 23.12 0.00 43.52 2.73
2258 2297 2.954316 TCATGTGACGTCATGGTGTAC 58.046 47.619 23.12 7.34 43.52 2.90
2259 2298 3.669251 TTCATGTGACGTCATGGTGTA 57.331 42.857 23.12 11.54 43.52 2.90
2260 2299 2.542020 TTCATGTGACGTCATGGTGT 57.458 45.000 23.12 3.48 43.52 4.16
2261 2300 2.807967 ACTTTCATGTGACGTCATGGTG 59.192 45.455 23.12 19.22 43.52 4.17
2262 2301 2.807967 CACTTTCATGTGACGTCATGGT 59.192 45.455 23.12 7.99 43.52 3.55
2263 2302 2.160219 CCACTTTCATGTGACGTCATGG 59.840 50.000 23.12 17.97 43.52 3.66
2264 2303 2.160219 CCCACTTTCATGTGACGTCATG 59.840 50.000 23.12 16.94 44.36 3.07
2265 2304 2.426522 CCCACTTTCATGTGACGTCAT 58.573 47.619 23.12 3.16 40.12 3.06
2266 2305 1.542328 CCCCACTTTCATGTGACGTCA 60.542 52.381 15.76 15.76 40.12 4.35
2267 2306 1.156736 CCCCACTTTCATGTGACGTC 58.843 55.000 9.11 9.11 40.12 4.34
2268 2307 0.472471 ACCCCACTTTCATGTGACGT 59.528 50.000 0.00 0.00 40.12 4.34
2269 2308 0.874390 CACCCCACTTTCATGTGACG 59.126 55.000 0.00 0.00 40.12 4.35
2270 2309 0.598065 GCACCCCACTTTCATGTGAC 59.402 55.000 0.00 0.00 40.12 3.67
2271 2310 0.478072 AGCACCCCACTTTCATGTGA 59.522 50.000 0.00 0.00 40.12 3.58
2272 2311 0.599558 CAGCACCCCACTTTCATGTG 59.400 55.000 0.00 0.00 37.66 3.21
2273 2312 1.181098 GCAGCACCCCACTTTCATGT 61.181 55.000 0.00 0.00 0.00 3.21
2274 2313 0.896940 AGCAGCACCCCACTTTCATG 60.897 55.000 0.00 0.00 0.00 3.07
2363 2402 2.163818 AACCAAGAATGAGAACGCGA 57.836 45.000 15.93 0.00 0.00 5.87
2368 2407 2.448961 TCCCCCAAACCAAGAATGAGAA 59.551 45.455 0.00 0.00 0.00 2.87
2393 2432 4.202409 ACCCACCCAAATACACCAAATTTG 60.202 41.667 11.40 11.40 41.77 2.32
2409 2448 2.497273 CCTTCATTGAAATCACCCACCC 59.503 50.000 0.01 0.00 0.00 4.61
2418 2457 5.221501 CCAACAGGTCAACCTTCATTGAAAT 60.222 40.000 14.78 0.00 46.09 2.17
2519 2558 3.959535 TTTTGGAAGCCTTGCCATTAG 57.040 42.857 0.00 0.00 33.46 1.73
2653 2692 3.575256 AGAAGCATTGGCATGACAAAAGA 59.425 39.130 19.96 0.00 44.61 2.52
2813 2852 5.185249 TCGGAAAACTAGCTTCAGTAGACAT 59.815 40.000 0.00 0.00 0.00 3.06
3032 3071 4.273148 ACGAGAAAATCAAGGCAGTACT 57.727 40.909 0.00 0.00 0.00 2.73
3033 3072 6.663944 AATACGAGAAAATCAAGGCAGTAC 57.336 37.500 0.00 0.00 0.00 2.73
3034 3073 8.958119 ATAAATACGAGAAAATCAAGGCAGTA 57.042 30.769 0.00 0.00 0.00 2.74
3035 3074 7.865706 ATAAATACGAGAAAATCAAGGCAGT 57.134 32.000 0.00 0.00 0.00 4.40
3036 3075 9.573133 AAAATAAATACGAGAAAATCAAGGCAG 57.427 29.630 0.00 0.00 0.00 4.85
3071 3110 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
3072 3111 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
3073 3112 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
3074 3113 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
3075 3114 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
3076 3115 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
3077 3116 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
3078 3117 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
3079 3118 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
3080 3119 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
3081 3120 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
3082 3121 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
3083 3122 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
3084 3123 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
3085 3124 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
3086 3125 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
3087 3126 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
3088 3127 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
3089 3128 1.656587 AAGGACAGACCCAGTGCATA 58.343 50.000 0.00 0.00 40.05 3.14
3090 3129 0.773644 AAAGGACAGACCCAGTGCAT 59.226 50.000 0.00 0.00 40.05 3.96
3091 3130 0.550914 AAAAGGACAGACCCAGTGCA 59.449 50.000 0.00 0.00 40.05 4.57
3092 3131 1.692411 AAAAAGGACAGACCCAGTGC 58.308 50.000 0.00 0.00 40.05 4.40
3112 3151 9.737427 CCCAAATGTATACGCAACATAAAATAA 57.263 29.630 0.00 0.00 36.56 1.40
3113 3152 7.863375 GCCCAAATGTATACGCAACATAAAATA 59.137 33.333 0.00 0.00 36.56 1.40
3114 3153 6.699642 GCCCAAATGTATACGCAACATAAAAT 59.300 34.615 0.00 0.00 36.56 1.82
3115 3154 6.037098 GCCCAAATGTATACGCAACATAAAA 58.963 36.000 0.00 0.00 36.56 1.52
3116 3155 5.358442 AGCCCAAATGTATACGCAACATAAA 59.642 36.000 0.00 0.00 36.56 1.40
3117 3156 4.884744 AGCCCAAATGTATACGCAACATAA 59.115 37.500 0.00 0.00 36.56 1.90
3118 3157 4.456535 AGCCCAAATGTATACGCAACATA 58.543 39.130 0.00 0.00 36.56 2.29
3273 3314 9.316730 GCATAATAATCCAAGAAAAAGAATGCA 57.683 29.630 0.00 0.00 34.96 3.96
3312 3353 7.121168 CCAATTAAAGCCTTGTTGAGTGAGATA 59.879 37.037 0.63 0.00 0.00 1.98
3324 3365 3.244976 CACGCTTCCAATTAAAGCCTTG 58.755 45.455 15.42 10.74 45.00 3.61
3390 3442 4.975502 CGACTACACATGCAAAAACAATGT 59.024 37.500 0.00 0.00 0.00 2.71
3612 3668 4.320870 ACTTAGGGTTATTCCAACACACG 58.679 43.478 0.00 0.00 38.11 4.49
3658 3715 4.098960 CCAATCCAAATAATGAGCAGCACT 59.901 41.667 0.00 0.00 0.00 4.40
3835 3893 7.062749 ACAGGTAGTAACAAAGATCAAGTGA 57.937 36.000 0.00 0.00 0.00 3.41
4052 4110 8.020861 TGGTTAAATGACATTACGAACAGTAC 57.979 34.615 16.35 0.00 34.56 2.73
4170 4228 1.234821 CACGCCTAAACCTTCTTGCA 58.765 50.000 0.00 0.00 0.00 4.08
4279 4337 3.129287 GCTAATGTAAGTGCAGCCATGTT 59.871 43.478 0.00 0.00 0.00 2.71
4300 4358 7.175641 AGGATACATAAAAATAGCATGACAGGC 59.824 37.037 3.34 3.34 41.41 4.85
4305 4363 9.791801 TTAGCAGGATACATAAAAATAGCATGA 57.208 29.630 0.00 0.00 41.41 3.07
4386 4444 9.743057 CTAAGTGTGTTCCATAAATCAAAAACA 57.257 29.630 0.00 0.00 0.00 2.83
4388 4446 8.919145 ACCTAAGTGTGTTCCATAAATCAAAAA 58.081 29.630 0.00 0.00 0.00 1.94
4463 5986 6.779049 TGAAGAAGTGGTACTAACTCCAAGTA 59.221 38.462 2.81 0.00 35.38 2.24
4535 6058 3.438781 TGTAAACGATGCATCTTTGACCC 59.561 43.478 23.81 11.86 0.00 4.46
4568 6091 2.107366 CCACCAGGTCAAAAGGTTTGT 58.893 47.619 0.00 0.00 32.15 2.83
4593 6116 4.047883 AGGGATGAATAAGGCACCTTAGT 58.952 43.478 14.20 11.76 41.18 2.24
4703 6227 0.681175 CACTCCCAAAAGGGCAAAGG 59.319 55.000 0.00 0.00 35.67 3.11
5445 6979 5.534407 TCTGATGACTACTTTTACGCACAA 58.466 37.500 0.00 0.00 0.00 3.33
5480 7014 0.323725 ATGGATCGCAAGGCCAACTT 60.324 50.000 5.01 0.00 43.44 2.66
5528 7216 4.821177 GCAAAGCCTAATGCCAGC 57.179 55.556 0.00 0.00 42.71 4.85
5548 7236 0.250553 TCACCCATTCACCCGTGTTC 60.251 55.000 0.00 0.00 0.00 3.18
5568 7256 8.706936 CATCTTGATCGGAGTGATACTTAATTG 58.293 37.037 0.00 0.00 37.47 2.32
5599 7287 2.627933 ACTGCCCCACTTACTAGGAAA 58.372 47.619 0.00 0.00 0.00 3.13
5607 7295 5.532406 CGTACTACTATAACTGCCCCACTTA 59.468 44.000 0.00 0.00 0.00 2.24
6059 7756 1.005215 ACTTGGGGGCTGATTCTTCTG 59.995 52.381 0.00 0.00 0.00 3.02
6068 7765 2.203209 GCCGATACTTGGGGGCTG 60.203 66.667 0.00 0.00 42.29 4.85
6138 7835 2.946988 TACATCCTCCTGGGGCCTCG 62.947 65.000 0.84 0.00 35.33 4.63
6218 7915 2.372074 GGTACCCATGGGCTTCCGA 61.372 63.158 31.73 6.34 39.32 4.55
6233 7930 5.357596 AGCTTTGTTTCTTAAAACCGTGGTA 59.642 36.000 0.00 0.00 43.44 3.25
6452 8149 1.377202 GGCCTGAAATGCCGACAGA 60.377 57.895 0.00 0.00 38.04 3.41
6506 8203 4.039730 ACCATATCGCTCTATTCACAAGCT 59.960 41.667 0.00 0.00 33.83 3.74
6570 8267 1.355971 GCAACAAGACTCGCGGAATA 58.644 50.000 6.13 0.00 0.00 1.75
6597 8294 0.529378 AACGCCGAATTACCGAGAGT 59.471 50.000 0.00 0.00 0.00 3.24
6598 8295 1.636988 AAACGCCGAATTACCGAGAG 58.363 50.000 0.00 0.00 0.00 3.20
6599 8296 1.994779 GAAAACGCCGAATTACCGAGA 59.005 47.619 0.00 0.00 0.00 4.04
6600 8297 1.997606 AGAAAACGCCGAATTACCGAG 59.002 47.619 0.00 0.00 0.00 4.63
6601 8298 2.083167 AGAAAACGCCGAATTACCGA 57.917 45.000 0.00 0.00 0.00 4.69
6602 8299 2.501881 CAAGAAAACGCCGAATTACCG 58.498 47.619 0.00 0.00 0.00 4.02
6603 8300 2.095415 AGCAAGAAAACGCCGAATTACC 60.095 45.455 0.00 0.00 0.00 2.85
6604 8301 3.197434 AGCAAGAAAACGCCGAATTAC 57.803 42.857 0.00 0.00 0.00 1.89
6630 8327 2.679837 AGCACATCGGCATCAAAGTAAG 59.320 45.455 0.00 0.00 35.83 2.34
6634 8334 4.453478 ACATATAGCACATCGGCATCAAAG 59.547 41.667 0.00 0.00 35.83 2.77
6642 8342 7.331687 TCATGATACAAACATATAGCACATCGG 59.668 37.037 0.00 0.00 0.00 4.18
6723 8423 6.021596 GGTGAAACTTTATACAGCACGATTG 58.978 40.000 0.00 0.00 36.74 2.67
6727 8427 6.715344 TTAGGTGAAACTTTATACAGCACG 57.285 37.500 0.00 0.00 36.74 5.34
6748 8448 4.647399 CCCTGGGTTTTCACTTCAGTTTTA 59.353 41.667 3.97 0.00 0.00 1.52
6825 8525 1.205655 CATCTTTCTCCTCGGCTGACA 59.794 52.381 0.00 0.00 0.00 3.58
6832 8532 1.753649 TCTGCTCCATCTTTCTCCTCG 59.246 52.381 0.00 0.00 0.00 4.63
6846 8546 5.669477 AGACTTCATACCAGATTTCTGCTC 58.331 41.667 1.90 0.00 42.47 4.26
6880 8580 4.041740 TGATGTACGATTACCTCAGCAC 57.958 45.455 0.00 0.00 30.41 4.40
6881 8581 4.682787 CTTGATGTACGATTACCTCAGCA 58.317 43.478 0.00 0.00 35.18 4.41
6882 8582 3.491267 GCTTGATGTACGATTACCTCAGC 59.509 47.826 0.00 0.00 35.18 4.26
6883 8583 3.731216 CGCTTGATGTACGATTACCTCAG 59.269 47.826 0.00 0.00 35.18 3.35
6884 8584 3.379057 TCGCTTGATGTACGATTACCTCA 59.621 43.478 0.00 0.00 32.72 3.86
6885 8585 3.729716 GTCGCTTGATGTACGATTACCTC 59.270 47.826 0.00 0.00 38.22 3.85
6886 8586 3.129813 TGTCGCTTGATGTACGATTACCT 59.870 43.478 0.00 0.00 38.22 3.08
6887 8587 3.441163 TGTCGCTTGATGTACGATTACC 58.559 45.455 0.00 0.00 38.22 2.85
6888 8588 5.637104 ATTGTCGCTTGATGTACGATTAC 57.363 39.130 0.00 0.00 38.22 1.89
6889 8589 5.808030 TGAATTGTCGCTTGATGTACGATTA 59.192 36.000 0.00 0.00 38.22 1.75
6890 8590 4.629634 TGAATTGTCGCTTGATGTACGATT 59.370 37.500 0.00 0.00 38.22 3.34
6899 8685 3.055891 TGGATCTCTGAATTGTCGCTTGA 60.056 43.478 0.00 0.00 0.00 3.02
6926 8712 1.135689 CCGTTCCAAGCATGCAAGTAC 60.136 52.381 21.98 10.45 0.00 2.73
6927 8713 1.164411 CCGTTCCAAGCATGCAAGTA 58.836 50.000 21.98 0.00 0.00 2.24
6929 8715 1.444895 GCCGTTCCAAGCATGCAAG 60.445 57.895 21.98 11.51 0.00 4.01
6930 8716 2.144833 CTGCCGTTCCAAGCATGCAA 62.145 55.000 21.98 1.65 38.56 4.08
6985 8792 3.415237 CTGACTCTCAGGCTCGTTG 57.585 57.895 0.00 0.00 40.71 4.10
7031 8838 4.949238 AGCTTTTTGCCACATTTTTCCTTT 59.051 33.333 0.00 0.00 44.23 3.11
7036 8843 4.336153 CCTGAAGCTTTTTGCCACATTTTT 59.664 37.500 0.00 0.00 44.23 1.94
7051 8871 2.301870 TCACGGTTGTATTCCTGAAGCT 59.698 45.455 0.00 0.00 0.00 3.74
7087 8907 4.832248 TGTAGTGATGGAAGAACATGACC 58.168 43.478 0.00 0.00 35.88 4.02
7099 8925 4.082125 AGGCCTTTTTCTTGTAGTGATGG 58.918 43.478 0.00 0.00 0.00 3.51
7118 8944 0.096454 CGCTTGTTAAGGCGTTAGGC 59.904 55.000 8.60 3.08 45.34 3.93
7125 8951 2.614057 AGTATCATGCGCTTGTTAAGGC 59.386 45.455 21.14 7.52 0.00 4.35
7126 8952 5.696270 TGATAGTATCATGCGCTTGTTAAGG 59.304 40.000 21.14 0.00 33.59 2.69
7128 8954 5.465390 GGTGATAGTATCATGCGCTTGTTAA 59.535 40.000 21.14 4.52 42.04 2.01
7129 8955 4.988540 GGTGATAGTATCATGCGCTTGTTA 59.011 41.667 21.14 15.01 42.04 2.41
7130 8956 3.809832 GGTGATAGTATCATGCGCTTGTT 59.190 43.478 21.14 15.97 42.04 2.83
7131 8957 3.393800 GGTGATAGTATCATGCGCTTGT 58.606 45.455 21.14 12.05 42.04 3.16
7132 8958 2.409715 CGGTGATAGTATCATGCGCTTG 59.590 50.000 15.77 16.66 42.04 4.01
7133 8959 2.035961 ACGGTGATAGTATCATGCGCTT 59.964 45.455 15.77 0.00 42.04 4.68
7134 8960 1.613925 ACGGTGATAGTATCATGCGCT 59.386 47.619 15.77 0.00 42.04 5.92
7160 8986 2.119801 GCTTCTTGCTGATGGAAGGA 57.880 50.000 0.00 0.00 41.21 3.36
7173 9003 4.713792 TCTTTTCCCTTCTCAGCTTCTT 57.286 40.909 0.00 0.00 0.00 2.52
7197 9027 3.832527 TGCAAGTAGAAGCCTTCCTTTT 58.167 40.909 0.00 0.00 32.78 2.27
7216 9046 0.318275 GTCGGAGAGACGATGGATGC 60.318 60.000 0.00 0.00 45.47 3.91
7217 9047 3.855630 GTCGGAGAGACGATGGATG 57.144 57.895 0.00 0.00 45.47 3.51
7250 9080 2.409651 GCCGACGACTAGGAGCAG 59.590 66.667 0.00 0.00 0.00 4.24
7252 9082 4.253257 CCGCCGACGACTAGGAGC 62.253 72.222 0.00 0.00 43.93 4.70
7271 9103 3.971702 GTTGGGAGGGCCAGCAGT 61.972 66.667 6.18 0.00 35.15 4.40
7286 9118 3.011517 ATGCTGGAGGCGGAGGTT 61.012 61.111 0.00 0.00 45.43 3.50
7361 9193 2.203167 CATGCAGATGAGGCGGCT 60.203 61.111 13.09 13.09 0.00 5.52
7378 9210 1.609555 TGATTGTGTACAAAACCCGGC 59.390 47.619 0.00 0.00 39.55 6.13
7383 9215 8.207252 CACGAAATCATTGATTGTGTACAAAAC 58.793 33.333 12.50 0.00 39.55 2.43
7387 9219 5.049129 TGCACGAAATCATTGATTGTGTACA 60.049 36.000 21.51 16.31 32.30 2.90
7391 9223 3.609373 GGTGCACGAAATCATTGATTGTG 59.391 43.478 18.60 18.60 32.14 3.33
7392 9224 3.507233 AGGTGCACGAAATCATTGATTGT 59.493 39.130 12.50 4.80 32.14 2.71
7393 9225 4.100707 AGGTGCACGAAATCATTGATTG 57.899 40.909 12.50 4.20 32.14 2.67
7394 9226 6.767902 AGTATAGGTGCACGAAATCATTGATT 59.232 34.615 11.45 6.06 33.25 2.57
7395 9227 6.291377 AGTATAGGTGCACGAAATCATTGAT 58.709 36.000 11.45 0.00 0.00 2.57
7396 9228 5.670485 AGTATAGGTGCACGAAATCATTGA 58.330 37.500 11.45 0.00 0.00 2.57
7397 9229 5.991328 AGTATAGGTGCACGAAATCATTG 57.009 39.130 11.45 0.00 0.00 2.82
7399 9231 7.892609 TGTATAGTATAGGTGCACGAAATCAT 58.107 34.615 11.45 1.47 0.00 2.45
7400 9232 7.013942 ACTGTATAGTATAGGTGCACGAAATCA 59.986 37.037 11.45 0.00 34.74 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.