Multiple sequence alignment - TraesCS3B01G304000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G304000 chr3B 100.000 5169 0 0 1 5169 488186651 488191819 0.000000e+00 9546.0
1 TraesCS3B01G304000 chr3B 95.294 85 3 1 3821 3905 581076358 581076275 3.250000e-27 134.0
2 TraesCS3B01G304000 chr3B 90.625 96 9 0 2846 2941 90127183 90127088 1.510000e-25 128.0
3 TraesCS3B01G304000 chr3B 98.276 58 1 0 5058 5115 488191648 488191705 9.160000e-18 102.0
4 TraesCS3B01G304000 chr3B 98.276 58 1 0 4998 5055 488191708 488191765 9.160000e-18 102.0
5 TraesCS3B01G304000 chr3A 94.982 2850 102 16 21 2851 496986519 496989346 0.000000e+00 4433.0
6 TraesCS3B01G304000 chr3A 90.838 895 59 13 2942 3822 496989342 496990227 0.000000e+00 1177.0
7 TraesCS3B01G304000 chr3A 92.044 817 45 7 3898 4705 496990220 496991025 0.000000e+00 1131.0
8 TraesCS3B01G304000 chr3A 77.689 251 25 9 4806 5055 496991694 496991914 1.950000e-24 124.0
9 TraesCS3B01G304000 chr3A 92.754 69 4 1 4711 4778 496991239 496991307 1.180000e-16 99.0
10 TraesCS3B01G304000 chr3D 95.327 2247 97 5 610 2851 374355865 374358108 0.000000e+00 3561.0
11 TraesCS3B01G304000 chr3D 93.636 880 43 6 3902 4778 374358986 374359855 0.000000e+00 1303.0
12 TraesCS3B01G304000 chr3D 90.838 895 56 14 2942 3822 374358104 374358986 0.000000e+00 1175.0
13 TraesCS3B01G304000 chr3D 93.103 203 5 2 1 202 374355104 374355298 6.550000e-74 289.0
14 TraesCS3B01G304000 chr3D 84.477 277 26 9 302 571 374355604 374355870 1.850000e-64 257.0
15 TraesCS3B01G304000 chr7D 96.629 89 3 0 3818 3906 633878854 633878766 1.160000e-31 148.0
16 TraesCS3B01G304000 chr7D 92.391 92 7 0 3821 3912 261817972 261817881 1.170000e-26 132.0
17 TraesCS3B01G304000 chr6A 87.500 128 11 5 2815 2941 481080543 481080420 5.400000e-30 143.0
18 TraesCS3B01G304000 chr1D 93.750 96 5 1 2846 2941 455800041 455800135 5.400000e-30 143.0
19 TraesCS3B01G304000 chr1D 93.478 46 2 1 3628 3672 22976572 22976617 3.340000e-07 67.6
20 TraesCS3B01G304000 chr4B 94.505 91 3 2 3820 3909 4556842 4556753 6.980000e-29 139.0
21 TraesCS3B01G304000 chr1B 94.505 91 4 1 3819 3908 681691004 681691094 6.980000e-29 139.0
22 TraesCS3B01G304000 chr1B 93.617 47 1 2 3627 3672 662546251 662546296 9.290000e-08 69.4
23 TraesCS3B01G304000 chr2D 95.402 87 3 1 3820 3905 95418729 95418643 2.510000e-28 137.0
24 TraesCS3B01G304000 chr7B 93.478 92 4 2 2850 2940 69817224 69817314 9.030000e-28 135.0
25 TraesCS3B01G304000 chr7B 94.253 87 5 0 3819 3905 353796314 353796228 3.250000e-27 134.0
26 TraesCS3B01G304000 chr5B 94.318 88 5 0 3818 3905 629934763 629934850 9.030000e-28 135.0
27 TraesCS3B01G304000 chr5B 94.253 87 5 0 3820 3906 488608200 488608114 3.250000e-27 134.0
28 TraesCS3B01G304000 chr5B 91.111 90 8 0 2850 2939 683495519 683495430 7.030000e-24 122.0
29 TraesCS3B01G304000 chr5B 91.228 57 2 2 3620 3675 427246168 427246222 2.000000e-09 75.0
30 TraesCS3B01G304000 chr4A 93.407 91 3 3 2852 2941 1134811 1134899 1.170000e-26 132.0
31 TraesCS3B01G304000 chr7A 90.625 96 8 1 2846 2941 676084611 676084705 5.430000e-25 126.0
32 TraesCS3B01G304000 chr6D 91.489 94 5 3 2850 2941 221838821 221838729 5.430000e-25 126.0
33 TraesCS3B01G304000 chr2B 89.011 91 10 0 2850 2940 665517567 665517477 4.230000e-21 113.0
34 TraesCS3B01G304000 chr2B 91.667 48 3 1 3628 3674 518745764 518745717 1.200000e-06 65.8
35 TraesCS3B01G304000 chr2B 91.304 46 3 1 3628 3672 708867383 708867428 1.550000e-05 62.1
36 TraesCS3B01G304000 chr4D 84.848 66 3 6 3620 3679 44749414 44749350 5.590000e-05 60.2
37 TraesCS3B01G304000 chr4D 85.484 62 3 4 3620 3675 66303798 66303737 5.590000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G304000 chr3B 488186651 488191819 5168 False 3250.0 9546 98.850667 1 5169 3 chr3B.!!$F1 5168
1 TraesCS3B01G304000 chr3A 496986519 496991914 5395 False 1392.8 4433 89.661400 21 5055 5 chr3A.!!$F1 5034
2 TraesCS3B01G304000 chr3D 374355104 374359855 4751 False 1317.0 3561 91.476200 1 4778 5 chr3D.!!$F1 4777

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
821 1046 0.250513 ATTCCTGAGGACAGAACCGC 59.749 55.000 0.00 0.0 46.03 5.68 F
1243 1469 0.035439 GCCAAAGTCGAAGGGGATGA 60.035 55.000 0.00 0.0 0.00 2.92 F
2076 2305 1.003118 TGTCGGCTTATGCTCACCTTT 59.997 47.619 0.13 0.0 39.59 3.11 F
2935 3167 0.390124 GGGAAACCGGACCCAAAAAC 59.610 55.000 23.49 3.3 44.96 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2780 3012 0.169009 GACAACTTCTGATTGGCCGC 59.831 55.0 0.00 0.00 0.00 6.53 R
2914 3146 0.178984 TTTTGGGTCCGGTTTCCCTC 60.179 55.0 24.17 7.61 43.74 4.30 R
4063 4309 0.036164 TACGGGTGCAATTGTCTGCT 59.964 50.0 7.40 0.00 43.07 4.24 R
4845 5666 0.096976 TACTGTTACCGTACGAGCGC 59.903 55.0 18.76 0.00 0.00 5.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
215 223 1.961277 CGACTGGGCCGCCATTATC 60.961 63.158 12.58 2.02 0.00 1.75
246 254 2.389715 ACCATTACCTCCTCCTCTTCG 58.610 52.381 0.00 0.00 0.00 3.79
276 284 4.101448 CCCTCCGCCCTCACCAAG 62.101 72.222 0.00 0.00 0.00 3.61
456 676 4.338118 TGCCTTCTGTTTGTTTTCTCGAAT 59.662 37.500 0.00 0.00 0.00 3.34
462 682 8.433421 TTCTGTTTGTTTTCTCGAATAGAACT 57.567 30.769 0.00 0.00 44.02 3.01
475 696 4.261656 CGAATAGAACTATCCAGGCGTTCT 60.262 45.833 17.44 17.44 46.39 3.01
504 726 3.056322 GCATATGAGGGGAATTTCATGCC 60.056 47.826 6.97 0.00 35.72 4.40
522 744 2.256461 GCTGTTTTGCTCTGCCCG 59.744 61.111 0.00 0.00 0.00 6.13
524 746 3.273080 CTGTTTTGCTCTGCCCGGC 62.273 63.158 1.04 1.04 0.00 6.13
525 747 2.985847 GTTTTGCTCTGCCCGGCT 60.986 61.111 11.61 0.00 0.00 5.52
536 758 2.418083 GCCCGGCTTTGGATCAAGG 61.418 63.158 0.71 0.00 0.00 3.61
537 759 1.754234 CCCGGCTTTGGATCAAGGG 60.754 63.158 0.00 0.00 0.00 3.95
608 832 1.021202 TCTTGCTGTTGTTTCCGGTG 58.979 50.000 0.00 0.00 0.00 4.94
647 871 7.558161 TGACATTTAGATTGGAGCACTTATG 57.442 36.000 0.00 0.00 0.00 1.90
805 1029 0.608035 TGGGCGTGGAGTTGGAATTC 60.608 55.000 0.00 0.00 0.00 2.17
819 1044 2.305927 TGGAATTCCTGAGGACAGAACC 59.694 50.000 24.73 1.58 46.03 3.62
821 1046 0.250513 ATTCCTGAGGACAGAACCGC 59.749 55.000 0.00 0.00 46.03 5.68
822 1047 0.832135 TTCCTGAGGACAGAACCGCT 60.832 55.000 0.00 0.00 46.03 5.52
825 1050 1.134965 CCTGAGGACAGAACCGCTTAG 60.135 57.143 0.00 0.00 46.03 2.18
885 1111 4.051922 CGGTTTATGACTGAGCTGGTATC 58.948 47.826 0.00 0.00 36.72 2.24
928 1154 4.021104 ACAACTTGTCTGTAGAGCAGCATA 60.021 41.667 0.00 0.00 44.66 3.14
929 1155 4.383850 ACTTGTCTGTAGAGCAGCATAG 57.616 45.455 0.00 0.00 44.66 2.23
934 1160 3.632604 GTCTGTAGAGCAGCATAGTGGTA 59.367 47.826 0.00 0.00 44.66 3.25
959 1185 4.070716 AGAGAGGTGATGTCTTTTGCTTG 58.929 43.478 0.00 0.00 0.00 4.01
1074 1300 0.107654 CAGAATTCGACCCCTCACCC 60.108 60.000 0.00 0.00 0.00 4.61
1131 1357 0.178921 TGAGAGGGGTGCTGACTTCT 60.179 55.000 0.00 0.00 0.00 2.85
1206 1432 4.438744 GCAACTATATTGTCCCACAAGCAC 60.439 45.833 0.00 0.00 41.94 4.40
1243 1469 0.035439 GCCAAAGTCGAAGGGGATGA 60.035 55.000 0.00 0.00 0.00 2.92
1273 1499 7.201938 GGAAAAAGGCCATGATCAATCTATTCA 60.202 37.037 5.01 0.00 0.00 2.57
1371 1597 2.503895 AGGACAGGCTTCCATTTGAG 57.496 50.000 15.14 0.00 38.25 3.02
1379 1605 1.406903 CTTCCATTTGAGGGGGATGC 58.593 55.000 0.00 0.00 0.00 3.91
1400 1626 3.604772 GCGATTGATAGACGACAAATGGC 60.605 47.826 0.00 0.00 0.00 4.40
1635 1861 3.627577 CACACCAGGCATATTACCTTCAC 59.372 47.826 0.00 0.00 34.42 3.18
1866 2092 6.830912 TCTAGATGGTATAGTGCATTTTGCT 58.169 36.000 0.00 0.00 45.31 3.91
1973 2202 9.394767 TCACAATACATGATGCAAACTAGTAAT 57.605 29.630 0.00 0.00 0.00 1.89
1998 2227 6.235231 TCTCTTGACACTCTTTAACTTGGT 57.765 37.500 0.00 0.00 0.00 3.67
2076 2305 1.003118 TGTCGGCTTATGCTCACCTTT 59.997 47.619 0.13 0.00 39.59 3.11
2175 2407 7.718272 TTTTTCCTTCTCAAATTTGCTGATG 57.282 32.000 13.54 14.00 0.00 3.07
2258 2490 5.357032 AGCTAATAGTACACAATTGTTGGGC 59.643 40.000 8.77 2.25 37.68 5.36
2263 2495 1.331214 ACACAATTGTTGGGCTGGAG 58.669 50.000 8.77 0.00 37.68 3.86
2292 2524 6.925610 TTGACATAGAAATGCACATCCTAC 57.074 37.500 0.00 0.00 36.50 3.18
2351 2583 8.419076 TTTCTGGTAGCTTTGAATTTGTTTTC 57.581 30.769 0.00 0.00 0.00 2.29
2352 2584 7.106439 TCTGGTAGCTTTGAATTTGTTTTCA 57.894 32.000 0.00 0.00 33.89 2.69
2362 2594 4.081752 TGAATTTGTTTTCAGTGCACTGGT 60.082 37.500 39.04 17.39 43.91 4.00
2388 2620 3.890756 CCATGCAGCTATAAAATGTCCCA 59.109 43.478 0.00 0.00 0.00 4.37
2405 2637 5.010933 TGTCCCACACAACAAAAAGTAGAA 58.989 37.500 0.00 0.00 29.30 2.10
2449 2681 7.839705 TGGTAGTAGGTCACATATCTTTTCTCT 59.160 37.037 0.00 0.00 0.00 3.10
2490 2722 9.023962 TGATTGATGATTACTTTACAGGCTTTT 57.976 29.630 0.00 0.00 0.00 2.27
2509 2741 8.687242 AGGCTTTTTAAAGATATCCAGTAAAGC 58.313 33.333 20.42 20.42 42.35 3.51
2688 2920 6.486657 AGAGCTGACAAACTTACTGCATTTAA 59.513 34.615 0.00 0.00 0.00 1.52
2721 2953 6.381481 TGCTGATGCATTTAATCTACCAAG 57.619 37.500 0.00 0.00 45.31 3.61
2779 3011 9.558396 TGAATTTCTACATTTGCCATTCTTTTT 57.442 25.926 0.00 0.00 0.00 1.94
2780 3012 9.815936 GAATTTCTACATTTGCCATTCTTTTTG 57.184 29.630 0.00 0.00 0.00 2.44
2788 3020 1.945355 GCCATTCTTTTTGCGGCCAAT 60.945 47.619 2.24 0.00 36.73 3.16
2904 3136 9.927081 AATTCATTGAATAGATAGAAGGTTGGT 57.073 29.630 12.15 0.00 31.46 3.67
2905 3137 8.964476 TTCATTGAATAGATAGAAGGTTGGTC 57.036 34.615 0.00 0.00 0.00 4.02
2906 3138 7.509546 TCATTGAATAGATAGAAGGTTGGTCC 58.490 38.462 0.00 0.00 0.00 4.46
2907 3139 6.884472 TTGAATAGATAGAAGGTTGGTCCA 57.116 37.500 0.00 0.00 39.02 4.02
2908 3140 6.485830 TGAATAGATAGAAGGTTGGTCCAG 57.514 41.667 0.00 0.00 39.02 3.86
2909 3141 5.964477 TGAATAGATAGAAGGTTGGTCCAGT 59.036 40.000 0.00 0.00 39.02 4.00
2910 3142 6.443849 TGAATAGATAGAAGGTTGGTCCAGTT 59.556 38.462 0.00 0.00 39.02 3.16
2911 3143 6.893020 ATAGATAGAAGGTTGGTCCAGTTT 57.107 37.500 0.00 0.00 39.02 2.66
2912 3144 7.989947 ATAGATAGAAGGTTGGTCCAGTTTA 57.010 36.000 0.00 0.00 39.02 2.01
2913 3145 6.893020 AGATAGAAGGTTGGTCCAGTTTAT 57.107 37.500 0.00 0.00 39.02 1.40
2914 3146 6.653989 AGATAGAAGGTTGGTCCAGTTTATG 58.346 40.000 0.00 0.00 39.02 1.90
2915 3147 4.993705 AGAAGGTTGGTCCAGTTTATGA 57.006 40.909 0.00 0.00 39.02 2.15
2916 3148 4.911390 AGAAGGTTGGTCCAGTTTATGAG 58.089 43.478 0.00 0.00 39.02 2.90
2917 3149 3.721087 AGGTTGGTCCAGTTTATGAGG 57.279 47.619 0.00 0.00 39.02 3.86
2918 3150 2.308866 AGGTTGGTCCAGTTTATGAGGG 59.691 50.000 0.00 0.00 39.02 4.30
2919 3151 2.307686 GGTTGGTCCAGTTTATGAGGGA 59.692 50.000 0.00 0.00 35.97 4.20
2920 3152 3.245122 GGTTGGTCCAGTTTATGAGGGAA 60.245 47.826 0.00 0.00 35.97 3.97
2921 3153 4.403734 GTTGGTCCAGTTTATGAGGGAAA 58.596 43.478 0.00 0.00 0.00 3.13
2922 3154 4.028993 TGGTCCAGTTTATGAGGGAAAC 57.971 45.455 0.00 0.00 37.11 2.78
2933 3165 4.603052 GGGAAACCGGACCCAAAA 57.397 55.556 23.49 0.00 44.96 2.44
2934 3166 2.823587 GGGAAACCGGACCCAAAAA 58.176 52.632 23.49 0.00 44.96 1.94
2935 3167 0.390124 GGGAAACCGGACCCAAAAAC 59.610 55.000 23.49 3.30 44.96 2.43
2936 3168 0.390124 GGAAACCGGACCCAAAAACC 59.610 55.000 9.46 0.00 0.00 3.27
2937 3169 1.112950 GAAACCGGACCCAAAAACCA 58.887 50.000 9.46 0.00 0.00 3.67
2938 3170 1.689813 GAAACCGGACCCAAAAACCAT 59.310 47.619 9.46 0.00 0.00 3.55
2939 3171 2.679429 AACCGGACCCAAAAACCATA 57.321 45.000 9.46 0.00 0.00 2.74
2940 3172 1.913778 ACCGGACCCAAAAACCATAC 58.086 50.000 9.46 0.00 0.00 2.39
2991 3223 9.461312 AGTGATGATAGAAGTATAGAGGATGAC 57.539 37.037 0.00 0.00 0.00 3.06
3002 3234 2.255406 AGAGGATGACTGTTGTCTGCT 58.745 47.619 0.00 0.00 43.29 4.24
3003 3235 2.028294 AGAGGATGACTGTTGTCTGCTG 60.028 50.000 0.00 0.00 43.29 4.41
3004 3236 0.801251 GGATGACTGTTGTCTGCTGC 59.199 55.000 0.00 0.00 43.29 5.25
3005 3237 1.610102 GGATGACTGTTGTCTGCTGCT 60.610 52.381 0.00 0.00 43.29 4.24
3032 3267 9.885934 GGAGTTCTTTTCTTTTCTGATTTAGTC 57.114 33.333 0.00 0.00 0.00 2.59
3081 3316 8.439971 AGATATGATAAAGTACAAAGGATGCCA 58.560 33.333 0.00 0.00 0.00 4.92
3092 3327 4.575645 ACAAAGGATGCCAAACATTGTTTG 59.424 37.500 27.74 27.74 42.21 2.93
3093 3328 2.769893 AGGATGCCAAACATTGTTTGC 58.230 42.857 28.80 24.09 39.84 3.68
3094 3329 2.369532 AGGATGCCAAACATTGTTTGCT 59.630 40.909 28.80 19.70 39.84 3.91
3095 3330 3.577848 AGGATGCCAAACATTGTTTGCTA 59.422 39.130 28.80 21.34 39.84 3.49
3096 3331 4.223477 AGGATGCCAAACATTGTTTGCTAT 59.777 37.500 28.80 24.04 39.84 2.97
3097 3332 4.567959 GGATGCCAAACATTGTTTGCTATC 59.432 41.667 28.80 28.05 39.84 2.08
3098 3333 4.597404 TGCCAAACATTGTTTGCTATCA 57.403 36.364 28.80 20.90 0.00 2.15
3099 3334 4.558178 TGCCAAACATTGTTTGCTATCAG 58.442 39.130 28.80 18.32 0.00 2.90
3126 3361 6.013379 TGAAACCAAGAGAGGTGATAATGTCT 60.013 38.462 0.00 0.00 42.25 3.41
3131 3366 6.093219 CCAAGAGAGGTGATAATGTCTGTTTG 59.907 42.308 0.00 0.00 0.00 2.93
3132 3367 6.611613 AGAGAGGTGATAATGTCTGTTTGA 57.388 37.500 0.00 0.00 0.00 2.69
3144 3379 7.627585 AATGTCTGTTTGAAATTTCACATCG 57.372 32.000 20.35 9.78 36.83 3.84
3189 3432 6.406370 TGAACCCAGTAGTATGAAATGTGAG 58.594 40.000 0.00 0.00 0.00 3.51
3194 3437 6.870965 CCCAGTAGTATGAAATGTGAGCTATC 59.129 42.308 0.00 0.00 0.00 2.08
3198 3441 6.992664 AGTATGAAATGTGAGCTATCCTCT 57.007 37.500 0.00 0.00 41.35 3.69
3371 3614 3.003394 TGGATGGCATACAAACCAGAG 57.997 47.619 10.70 0.00 39.88 3.35
3383 3626 3.197983 ACAAACCAGAGGAGCAGTATACC 59.802 47.826 0.00 0.00 0.00 2.73
3384 3627 1.693627 ACCAGAGGAGCAGTATACCG 58.306 55.000 0.00 0.00 0.00 4.02
3444 3687 3.136626 ACAGCACTATACTTTGGGATCCC 59.863 47.826 25.22 25.22 0.00 3.85
3462 3705 3.796764 CAAGAGATGGAAGAGCCCC 57.203 57.895 0.00 0.00 34.97 5.80
3465 3708 0.985490 AGAGATGGAAGAGCCCCACC 60.985 60.000 0.00 0.00 36.36 4.61
3468 3711 2.198304 GATGGAAGAGCCCCACCGTT 62.198 60.000 0.00 0.00 36.36 4.44
3510 3753 2.203625 GGAAGGGGTGGCTTGCAA 60.204 61.111 0.00 0.00 0.00 4.08
3521 3764 2.099756 GTGGCTTGCAAGTGAGTTCTTT 59.900 45.455 26.55 0.00 0.00 2.52
3522 3765 2.358898 TGGCTTGCAAGTGAGTTCTTTC 59.641 45.455 26.55 6.58 0.00 2.62
3524 3767 3.067320 GGCTTGCAAGTGAGTTCTTTCTT 59.933 43.478 26.55 0.00 0.00 2.52
3525 3768 4.286101 GCTTGCAAGTGAGTTCTTTCTTC 58.714 43.478 26.55 1.94 0.00 2.87
3526 3769 4.201950 GCTTGCAAGTGAGTTCTTTCTTCA 60.202 41.667 26.55 0.00 0.00 3.02
3527 3770 5.506982 GCTTGCAAGTGAGTTCTTTCTTCAT 60.507 40.000 26.55 0.00 0.00 2.57
3528 3771 6.455360 TTGCAAGTGAGTTCTTTCTTCATT 57.545 33.333 0.00 0.00 0.00 2.57
3632 3877 9.593134 CAGCTATTATTTATCCCTCTGTATCAC 57.407 37.037 0.00 0.00 0.00 3.06
3639 3884 3.458044 TCCCTCTGTATCACAGTGTCT 57.542 47.619 0.00 0.00 46.03 3.41
3645 3890 6.369065 CCCTCTGTATCACAGTGTCTAAAAAC 59.631 42.308 0.00 0.00 46.03 2.43
3699 3945 3.857052 TGTAATTGCCGTCCTAGTTGAG 58.143 45.455 0.00 0.00 0.00 3.02
3700 3946 3.259876 TGTAATTGCCGTCCTAGTTGAGT 59.740 43.478 0.00 0.00 0.00 3.41
3709 3955 3.057456 CGTCCTAGTTGAGTAACTGCAGT 60.057 47.826 15.25 15.25 46.28 4.40
3710 3956 4.155462 CGTCCTAGTTGAGTAACTGCAGTA 59.845 45.833 22.01 5.84 46.28 2.74
3718 3964 8.480643 AGTTGAGTAACTGCAGTATTGTTATC 57.519 34.615 22.01 11.71 45.17 1.75
3728 3974 6.943981 TGCAGTATTGTTATCAATTACGCTC 58.056 36.000 4.41 0.00 43.12 5.03
3773 4019 6.130569 GGGGTGAACCAAATGTAACCATATA 58.869 40.000 1.16 0.00 42.91 0.86
3793 4039 7.063898 CCATATAAATATCCACGAGAGCAAGTG 59.936 40.741 0.00 0.00 38.05 3.16
3821 4067 8.494433 AGCCAATACAATGATCTAAAGGAACTA 58.506 33.333 0.00 0.00 38.49 2.24
3822 4068 9.289782 GCCAATACAATGATCTAAAGGAACTAT 57.710 33.333 0.00 0.00 38.49 2.12
3831 4077 8.840200 TGATCTAAAGGAACTATTACCTCTGT 57.160 34.615 0.00 0.00 38.49 3.41
3832 4078 9.268282 TGATCTAAAGGAACTATTACCTCTGTT 57.732 33.333 0.00 0.00 38.49 3.16
3833 4079 9.752961 GATCTAAAGGAACTATTACCTCTGTTC 57.247 37.037 0.00 0.00 38.49 3.18
3836 4082 4.996788 GGAACTATTACCTCTGTTCCGA 57.003 45.455 7.80 0.00 45.61 4.55
3837 4083 5.334724 GGAACTATTACCTCTGTTCCGAA 57.665 43.478 7.80 0.00 45.61 4.30
3838 4084 5.727434 GGAACTATTACCTCTGTTCCGAAA 58.273 41.667 7.80 0.00 45.61 3.46
3839 4085 6.346896 GGAACTATTACCTCTGTTCCGAAAT 58.653 40.000 7.80 0.00 45.61 2.17
3840 4086 7.495055 GGAACTATTACCTCTGTTCCGAAATA 58.505 38.462 7.80 0.00 45.61 1.40
3841 4087 8.148999 GGAACTATTACCTCTGTTCCGAAATAT 58.851 37.037 7.80 0.00 45.61 1.28
3847 4093 5.589192 ACCTCTGTTCCGAAATATAAGTCG 58.411 41.667 2.29 2.29 37.01 4.18
3848 4094 5.126707 ACCTCTGTTCCGAAATATAAGTCGT 59.873 40.000 7.42 0.00 35.48 4.34
3849 4095 6.040878 CCTCTGTTCCGAAATATAAGTCGTT 58.959 40.000 7.42 0.00 35.48 3.85
3850 4096 6.534079 CCTCTGTTCCGAAATATAAGTCGTTT 59.466 38.462 7.42 0.00 35.48 3.60
3851 4097 7.285783 TCTGTTCCGAAATATAAGTCGTTTG 57.714 36.000 7.42 0.00 35.48 2.93
3852 4098 6.311935 TCTGTTCCGAAATATAAGTCGTTTGG 59.688 38.462 7.42 0.00 35.48 3.28
3853 4099 5.352016 TGTTCCGAAATATAAGTCGTTTGGG 59.648 40.000 7.42 0.57 35.48 4.12
3854 4100 4.444536 TCCGAAATATAAGTCGTTTGGGG 58.555 43.478 7.42 0.00 35.48 4.96
3855 4101 4.161942 TCCGAAATATAAGTCGTTTGGGGA 59.838 41.667 7.42 0.00 35.48 4.81
3856 4102 4.510340 CCGAAATATAAGTCGTTTGGGGAG 59.490 45.833 7.42 0.00 35.48 4.30
3857 4103 5.114081 CGAAATATAAGTCGTTTGGGGAGT 58.886 41.667 1.32 0.00 32.61 3.85
3858 4104 5.583457 CGAAATATAAGTCGTTTGGGGAGTT 59.417 40.000 1.32 0.00 32.61 3.01
3859 4105 6.238022 CGAAATATAAGTCGTTTGGGGAGTTC 60.238 42.308 1.32 0.00 32.61 3.01
3860 4106 5.687166 ATATAAGTCGTTTGGGGAGTTCA 57.313 39.130 0.00 0.00 0.00 3.18
3861 4107 2.256117 AAGTCGTTTGGGGAGTTCAG 57.744 50.000 0.00 0.00 0.00 3.02
3862 4108 1.129058 AGTCGTTTGGGGAGTTCAGT 58.871 50.000 0.00 0.00 0.00 3.41
3863 4109 1.489230 AGTCGTTTGGGGAGTTCAGTT 59.511 47.619 0.00 0.00 0.00 3.16
3864 4110 2.092592 AGTCGTTTGGGGAGTTCAGTTT 60.093 45.455 0.00 0.00 0.00 2.66
3865 4111 3.135167 AGTCGTTTGGGGAGTTCAGTTTA 59.865 43.478 0.00 0.00 0.00 2.01
3866 4112 3.249320 GTCGTTTGGGGAGTTCAGTTTAC 59.751 47.826 0.00 0.00 0.00 2.01
3867 4113 3.118334 TCGTTTGGGGAGTTCAGTTTACA 60.118 43.478 0.00 0.00 0.00 2.41
3868 4114 3.002965 CGTTTGGGGAGTTCAGTTTACAC 59.997 47.826 0.00 0.00 0.00 2.90
3869 4115 4.204799 GTTTGGGGAGTTCAGTTTACACT 58.795 43.478 0.00 0.00 0.00 3.55
3870 4116 3.764237 TGGGGAGTTCAGTTTACACTC 57.236 47.619 0.00 0.00 36.91 3.51
3874 4120 3.055209 GAGTTCAGTTTACACTCCCCC 57.945 52.381 0.00 0.00 32.26 5.40
3875 4121 2.370849 GAGTTCAGTTTACACTCCCCCA 59.629 50.000 0.00 0.00 32.26 4.96
3876 4122 2.781174 AGTTCAGTTTACACTCCCCCAA 59.219 45.455 0.00 0.00 0.00 4.12
3877 4123 2.882761 GTTCAGTTTACACTCCCCCAAC 59.117 50.000 0.00 0.00 0.00 3.77
3878 4124 1.071071 TCAGTTTACACTCCCCCAACG 59.929 52.381 0.00 0.00 0.00 4.10
3879 4125 1.071071 CAGTTTACACTCCCCCAACGA 59.929 52.381 0.00 0.00 0.00 3.85
3880 4126 1.071228 AGTTTACACTCCCCCAACGAC 59.929 52.381 0.00 0.00 0.00 4.34
3881 4127 1.071228 GTTTACACTCCCCCAACGACT 59.929 52.381 0.00 0.00 0.00 4.18
3882 4128 1.426751 TTACACTCCCCCAACGACTT 58.573 50.000 0.00 0.00 0.00 3.01
3883 4129 2.307496 TACACTCCCCCAACGACTTA 57.693 50.000 0.00 0.00 0.00 2.24
3884 4130 1.652947 ACACTCCCCCAACGACTTAT 58.347 50.000 0.00 0.00 0.00 1.73
3885 4131 2.823959 ACACTCCCCCAACGACTTATA 58.176 47.619 0.00 0.00 0.00 0.98
3886 4132 3.381335 ACACTCCCCCAACGACTTATAT 58.619 45.455 0.00 0.00 0.00 0.86
3887 4133 3.778629 ACACTCCCCCAACGACTTATATT 59.221 43.478 0.00 0.00 0.00 1.28
3888 4134 4.226620 ACACTCCCCCAACGACTTATATTT 59.773 41.667 0.00 0.00 0.00 1.40
3889 4135 5.426185 ACACTCCCCCAACGACTTATATTTA 59.574 40.000 0.00 0.00 0.00 1.40
3890 4136 5.989777 CACTCCCCCAACGACTTATATTTAG 59.010 44.000 0.00 0.00 0.00 1.85
3891 4137 5.901276 ACTCCCCCAACGACTTATATTTAGA 59.099 40.000 0.00 0.00 0.00 2.10
3892 4138 6.384886 ACTCCCCCAACGACTTATATTTAGAA 59.615 38.462 0.00 0.00 0.00 2.10
3893 4139 7.092757 ACTCCCCCAACGACTTATATTTAGAAA 60.093 37.037 0.00 0.00 0.00 2.52
3894 4140 7.049754 TCCCCCAACGACTTATATTTAGAAAC 58.950 38.462 0.00 0.00 0.00 2.78
3895 4141 6.018507 CCCCCAACGACTTATATTTAGAAACG 60.019 42.308 0.00 0.00 0.00 3.60
3896 4142 6.018507 CCCCAACGACTTATATTTAGAAACGG 60.019 42.308 0.00 0.00 0.00 4.44
3897 4143 6.757947 CCCAACGACTTATATTTAGAAACGGA 59.242 38.462 0.00 0.00 0.00 4.69
3898 4144 7.042925 CCCAACGACTTATATTTAGAAACGGAG 60.043 40.741 0.00 0.00 0.00 4.63
3899 4145 7.042925 CCAACGACTTATATTTAGAAACGGAGG 60.043 40.741 0.00 0.00 0.00 4.30
3900 4146 6.510536 ACGACTTATATTTAGAAACGGAGGG 58.489 40.000 0.00 0.00 0.00 4.30
3941 4187 7.986085 TCCGTAGTGTACTATATAGGGAAAC 57.014 40.000 14.25 6.87 0.00 2.78
4063 4309 2.168521 CGAGAGTCAAATGGAAGGCCTA 59.831 50.000 5.16 0.00 34.31 3.93
4081 4327 0.036164 TAGCAGACAATTGCACCCGT 59.964 50.000 5.05 0.00 46.47 5.28
4090 4336 4.020543 ACAATTGCACCCGTATTATGGTT 58.979 39.130 5.05 0.00 30.70 3.67
4216 4462 5.921962 TTGCTCATACTAGTGTGAGTGAT 57.078 39.130 35.67 8.57 46.41 3.06
4248 4494 4.575973 GGCAGCGCCCAGGATCAT 62.576 66.667 2.29 0.00 44.06 2.45
4280 4526 1.272092 CCCTGCCAAGACCTGATTCAA 60.272 52.381 0.00 0.00 0.00 2.69
4309 4555 5.945155 TGTCACACCAGTAAAAAGTTCAAC 58.055 37.500 0.00 0.00 0.00 3.18
4331 4577 4.035675 ACGAAAGAAGCCTGACAAAAGAAG 59.964 41.667 0.00 0.00 0.00 2.85
4335 4581 6.530019 AAGAAGCCTGACAAAAGAAGAAAA 57.470 33.333 0.00 0.00 0.00 2.29
4348 4594 3.870559 AGAAGAAAACCCCCTCACTCTA 58.129 45.455 0.00 0.00 0.00 2.43
4357 4603 3.916989 ACCCCCTCACTCTACATTCTTTT 59.083 43.478 0.00 0.00 0.00 2.27
4362 4608 6.660949 CCCCTCACTCTACATTCTTTTCAAAT 59.339 38.462 0.00 0.00 0.00 2.32
4395 4641 7.122501 TCTCACTCATATTCATCCAGCTAGATC 59.877 40.741 0.00 0.00 0.00 2.75
4415 4661 9.914834 CTAGATCTAGCCCTCTGTATATTTACT 57.085 37.037 16.68 0.00 0.00 2.24
4422 4668 7.958088 AGCCCTCTGTATATTTACTCTTTCTC 58.042 38.462 0.00 0.00 0.00 2.87
4491 4737 1.400494 AGTTTGTCACCGTTGCAACTC 59.600 47.619 26.09 11.95 0.00 3.01
4510 4756 8.864087 TGCAACTCTTGACAGATAGATATACAT 58.136 33.333 0.00 0.00 0.00 2.29
4528 4774 9.866798 GATATACATTCTCTTGATACATGAGCA 57.133 33.333 0.00 0.00 36.16 4.26
4530 4776 8.969260 ATACATTCTCTTGATACATGAGCAAA 57.031 30.769 0.00 0.00 36.16 3.68
4594 4846 1.597854 CTGTCCGTGCTTGGCTTCA 60.598 57.895 0.00 0.00 0.00 3.02
4620 4872 9.950496 AGAATTTTCTTCTCAGCTGTAATTCTA 57.050 29.630 14.67 0.00 38.56 2.10
4624 4876 6.214191 TCTTCTCAGCTGTAATTCTACCTG 57.786 41.667 14.67 0.00 0.00 4.00
4625 4877 4.392921 TCTCAGCTGTAATTCTACCTGC 57.607 45.455 14.67 0.00 0.00 4.85
4638 4890 0.666274 TACCTGCGACGTTGCTCTTG 60.666 55.000 27.33 15.18 35.36 3.02
4705 4959 1.758906 GGGGCTCGGCTACTCTCTT 60.759 63.158 0.00 0.00 0.00 2.85
4750 5211 2.029844 GCGGAGTGGTGTCTGCTTC 61.030 63.158 0.00 0.00 44.29 3.86
4752 5213 0.034059 CGGAGTGGTGTCTGCTTCTT 59.966 55.000 0.00 0.00 0.00 2.52
4785 5281 0.798776 GTCGTGATTCACTTGCCCAG 59.201 55.000 14.54 0.00 31.34 4.45
4789 5285 0.111061 TGATTCACTTGCCCAGCTGT 59.889 50.000 13.81 0.00 0.00 4.40
4805 5301 0.603707 CTGTGGCTCAACGATGGTGT 60.604 55.000 0.00 0.00 0.00 4.16
4813 5309 1.601903 TCAACGATGGTGTTGCTGTTC 59.398 47.619 1.88 0.00 46.85 3.18
4814 5310 1.603802 CAACGATGGTGTTGCTGTTCT 59.396 47.619 0.00 0.00 42.34 3.01
4817 5313 1.609208 GATGGTGTTGCTGTTCTGGT 58.391 50.000 0.00 0.00 0.00 4.00
4818 5314 1.267806 GATGGTGTTGCTGTTCTGGTG 59.732 52.381 0.00 0.00 0.00 4.17
4819 5315 0.254462 TGGTGTTGCTGTTCTGGTGA 59.746 50.000 0.00 0.00 0.00 4.02
4820 5316 1.133823 TGGTGTTGCTGTTCTGGTGAT 60.134 47.619 0.00 0.00 0.00 3.06
4821 5317 1.267806 GGTGTTGCTGTTCTGGTGATG 59.732 52.381 0.00 0.00 0.00 3.07
4823 5319 2.225019 GTGTTGCTGTTCTGGTGATGAG 59.775 50.000 0.00 0.00 0.00 2.90
4824 5320 1.808945 GTTGCTGTTCTGGTGATGAGG 59.191 52.381 0.00 0.00 0.00 3.86
4845 5666 2.887568 GCTCAGCGATGGTGACGG 60.888 66.667 0.00 0.00 35.04 4.79
4862 5683 1.870901 GGCGCTCGTACGGTAACAG 60.871 63.158 16.52 5.97 0.00 3.16
4868 5689 2.533129 GCTCGTACGGTAACAGTATTGC 59.467 50.000 16.52 0.00 0.00 3.56
4880 5701 2.829720 ACAGTATTGCGGAGTAAGGACA 59.170 45.455 0.00 0.00 34.31 4.02
4895 5716 3.314541 AGGACAACTCCAACGTGTATC 57.685 47.619 0.00 0.00 39.39 2.24
4897 5718 1.389106 GACAACTCCAACGTGTATCGC 59.611 52.381 0.00 0.00 44.19 4.58
4898 5719 0.719465 CAACTCCAACGTGTATCGCC 59.281 55.000 0.00 0.00 44.19 5.54
4899 5720 0.319083 AACTCCAACGTGTATCGCCA 59.681 50.000 0.00 0.00 44.19 5.69
4900 5721 0.319083 ACTCCAACGTGTATCGCCAA 59.681 50.000 0.00 0.00 44.19 4.52
4901 5722 1.270412 ACTCCAACGTGTATCGCCAAA 60.270 47.619 0.00 0.00 44.19 3.28
4902 5723 2.006888 CTCCAACGTGTATCGCCAAAT 58.993 47.619 0.00 0.00 44.19 2.32
4903 5724 2.418628 CTCCAACGTGTATCGCCAAATT 59.581 45.455 0.00 0.00 44.19 1.82
4921 5742 0.956410 TTGCCCGTAAATGTGTCCGG 60.956 55.000 0.00 0.00 40.12 5.14
4922 5743 1.078988 GCCCGTAAATGTGTCCGGA 60.079 57.895 0.00 0.00 43.01 5.14
4923 5744 1.363885 GCCCGTAAATGTGTCCGGAC 61.364 60.000 28.17 28.17 43.01 4.79
4924 5745 0.037139 CCCGTAAATGTGTCCGGACA 60.037 55.000 33.23 33.23 43.01 4.02
4925 5746 1.355971 CCGTAAATGTGTCCGGACAG 58.644 55.000 37.04 22.36 42.74 3.51
4926 5747 1.067425 CCGTAAATGTGTCCGGACAGA 60.067 52.381 37.04 35.28 42.74 3.41
4927 5748 2.610976 CCGTAAATGTGTCCGGACAGAA 60.611 50.000 37.04 27.38 42.74 3.02
4928 5749 2.410730 CGTAAATGTGTCCGGACAGAAC 59.589 50.000 37.04 27.16 42.74 3.01
4929 5750 2.631160 AAATGTGTCCGGACAGAACA 57.369 45.000 37.04 29.63 42.74 3.18
4930 5751 2.859165 AATGTGTCCGGACAGAACAT 57.141 45.000 37.04 30.41 42.74 2.71
4931 5752 2.859165 ATGTGTCCGGACAGAACATT 57.141 45.000 37.04 18.37 42.74 2.71
4932 5753 2.163818 TGTGTCCGGACAGAACATTC 57.836 50.000 37.04 22.91 42.74 2.67
4933 5754 1.270625 TGTGTCCGGACAGAACATTCC 60.271 52.381 37.04 22.18 42.74 3.01
4934 5755 1.052617 TGTCCGGACAGAACATTCCA 58.947 50.000 33.23 6.58 36.21 3.53
4935 5756 1.001974 TGTCCGGACAGAACATTCCAG 59.998 52.381 33.23 0.00 36.21 3.86
4936 5757 1.275291 GTCCGGACAGAACATTCCAGA 59.725 52.381 29.75 0.00 0.00 3.86
4937 5758 1.275291 TCCGGACAGAACATTCCAGAC 59.725 52.381 0.00 0.00 0.00 3.51
4938 5759 1.001974 CCGGACAGAACATTCCAGACA 59.998 52.381 0.00 0.00 0.00 3.41
4939 5760 2.069273 CGGACAGAACATTCCAGACAC 58.931 52.381 0.00 0.00 0.00 3.67
4940 5761 2.289072 CGGACAGAACATTCCAGACACT 60.289 50.000 0.00 0.00 0.00 3.55
4941 5762 3.744660 GGACAGAACATTCCAGACACTT 58.255 45.455 0.00 0.00 0.00 3.16
4942 5763 4.137543 GGACAGAACATTCCAGACACTTT 58.862 43.478 0.00 0.00 0.00 2.66
4943 5764 4.580580 GGACAGAACATTCCAGACACTTTT 59.419 41.667 0.00 0.00 0.00 2.27
4944 5765 5.505173 ACAGAACATTCCAGACACTTTTG 57.495 39.130 0.00 0.00 0.00 2.44
4945 5766 4.339247 ACAGAACATTCCAGACACTTTTGG 59.661 41.667 0.00 0.00 35.74 3.28
4946 5767 3.891366 AGAACATTCCAGACACTTTTGGG 59.109 43.478 0.00 0.00 35.13 4.12
4950 5771 0.482446 TCCAGACACTTTTGGGCCAT 59.518 50.000 7.26 0.00 35.13 4.40
4952 5773 2.311542 TCCAGACACTTTTGGGCCATAT 59.688 45.455 7.26 0.00 35.13 1.78
4953 5774 3.099141 CCAGACACTTTTGGGCCATATT 58.901 45.455 7.26 0.00 0.00 1.28
4982 5803 1.877443 CAAATTTGTTCGGACCGGTCT 59.123 47.619 32.52 8.80 0.00 3.85
4987 5808 2.203523 TTCGGACCGGTCTGGACA 60.204 61.111 36.95 21.73 42.00 4.02
5020 5841 1.044611 AAACCAACATGAAACCGGGG 58.955 50.000 6.32 0.00 0.00 5.73
5021 5842 0.186386 AACCAACATGAAACCGGGGA 59.814 50.000 6.32 0.00 0.00 4.81
5022 5843 0.186386 ACCAACATGAAACCGGGGAA 59.814 50.000 6.32 0.00 0.00 3.97
5023 5844 1.203125 ACCAACATGAAACCGGGGAAT 60.203 47.619 6.32 0.00 0.00 3.01
5024 5845 1.204467 CCAACATGAAACCGGGGAATG 59.796 52.381 6.32 6.77 0.00 2.67
5025 5846 1.892474 CAACATGAAACCGGGGAATGT 59.108 47.619 6.32 7.46 32.99 2.71
5026 5847 1.834188 ACATGAAACCGGGGAATGTC 58.166 50.000 6.32 0.00 0.00 3.06
5027 5848 1.354368 ACATGAAACCGGGGAATGTCT 59.646 47.619 6.32 0.00 0.00 3.41
5028 5849 1.745087 CATGAAACCGGGGAATGTCTG 59.255 52.381 6.32 0.00 0.00 3.51
5029 5850 1.060729 TGAAACCGGGGAATGTCTGA 58.939 50.000 6.32 0.00 0.00 3.27
5030 5851 1.003118 TGAAACCGGGGAATGTCTGAG 59.997 52.381 6.32 0.00 0.00 3.35
5031 5852 1.278127 GAAACCGGGGAATGTCTGAGA 59.722 52.381 6.32 0.00 0.00 3.27
5032 5853 0.613777 AACCGGGGAATGTCTGAGAC 59.386 55.000 6.32 5.47 0.00 3.36
5033 5854 0.544357 ACCGGGGAATGTCTGAGACA 60.544 55.000 18.64 18.64 46.90 3.41
5034 5855 0.176680 CCGGGGAATGTCTGAGACAG 59.823 60.000 20.90 5.90 46.04 3.51
5035 5856 0.460987 CGGGGAATGTCTGAGACAGC 60.461 60.000 20.90 14.41 46.04 4.40
5036 5857 0.908198 GGGGAATGTCTGAGACAGCT 59.092 55.000 20.90 10.38 46.04 4.24
5037 5858 1.280421 GGGGAATGTCTGAGACAGCTT 59.720 52.381 20.90 11.12 46.04 3.74
5038 5859 2.354259 GGGAATGTCTGAGACAGCTTG 58.646 52.381 20.90 0.00 46.04 4.01
5039 5860 2.027745 GGGAATGTCTGAGACAGCTTGA 60.028 50.000 20.90 0.00 46.04 3.02
5040 5861 3.557898 GGGAATGTCTGAGACAGCTTGAA 60.558 47.826 20.90 0.00 46.04 2.69
5041 5862 4.260170 GGAATGTCTGAGACAGCTTGAAT 58.740 43.478 20.90 0.00 46.04 2.57
5042 5863 4.094590 GGAATGTCTGAGACAGCTTGAATG 59.905 45.833 20.90 0.00 46.04 2.67
5043 5864 3.758755 TGTCTGAGACAGCTTGAATGT 57.241 42.857 11.93 0.00 37.67 2.71
5044 5865 3.657634 TGTCTGAGACAGCTTGAATGTC 58.342 45.455 11.93 0.00 46.01 3.06
5045 5866 2.999355 GTCTGAGACAGCTTGAATGTCC 59.001 50.000 7.90 0.00 46.68 4.02
5046 5867 1.998315 CTGAGACAGCTTGAATGTCCG 59.002 52.381 2.62 0.00 46.68 4.79
5047 5868 0.723981 GAGACAGCTTGAATGTCCGC 59.276 55.000 2.62 0.00 46.68 5.54
5048 5869 0.674895 AGACAGCTTGAATGTCCGCC 60.675 55.000 2.62 0.00 46.68 6.13
5049 5870 0.955428 GACAGCTTGAATGTCCGCCA 60.955 55.000 0.00 0.00 40.99 5.69
5050 5871 1.237285 ACAGCTTGAATGTCCGCCAC 61.237 55.000 0.00 0.00 0.00 5.01
5051 5872 1.073025 AGCTTGAATGTCCGCCACA 59.927 52.632 0.00 0.00 40.18 4.17
5053 5874 0.099436 GCTTGAATGTCCGCCACATC 59.901 55.000 0.00 0.00 45.77 3.06
5054 5875 0.374758 CTTGAATGTCCGCCACATCG 59.625 55.000 0.00 0.00 45.77 3.84
5055 5876 1.643868 TTGAATGTCCGCCACATCGC 61.644 55.000 0.00 0.00 45.77 4.58
5056 5877 1.815421 GAATGTCCGCCACATCGCT 60.815 57.895 0.00 0.00 45.77 4.93
5057 5878 1.766143 GAATGTCCGCCACATCGCTC 61.766 60.000 0.00 0.00 45.77 5.03
5058 5879 4.794439 TGTCCGCCACATCGCTCG 62.794 66.667 0.00 0.00 0.00 5.03
5059 5880 4.492160 GTCCGCCACATCGCTCGA 62.492 66.667 0.00 0.00 0.00 4.04
5060 5881 4.492160 TCCGCCACATCGCTCGAC 62.492 66.667 0.00 0.00 0.00 4.20
5061 5882 4.794439 CCGCCACATCGCTCGACA 62.794 66.667 0.00 0.00 0.00 4.35
5062 5883 2.809174 CGCCACATCGCTCGACAA 60.809 61.111 0.00 0.00 0.00 3.18
5063 5884 2.379634 CGCCACATCGCTCGACAAA 61.380 57.895 0.00 0.00 0.00 2.83
5064 5885 1.132640 GCCACATCGCTCGACAAAC 59.867 57.895 0.00 0.00 0.00 2.93
5065 5886 1.787847 CCACATCGCTCGACAAACC 59.212 57.895 0.00 0.00 0.00 3.27
5066 5887 0.948623 CCACATCGCTCGACAAACCA 60.949 55.000 0.00 0.00 0.00 3.67
5067 5888 0.865111 CACATCGCTCGACAAACCAA 59.135 50.000 0.00 0.00 0.00 3.67
5068 5889 0.865769 ACATCGCTCGACAAACCAAC 59.134 50.000 0.00 0.00 0.00 3.77
5069 5890 0.865111 CATCGCTCGACAAACCAACA 59.135 50.000 0.00 0.00 0.00 3.33
5070 5891 1.464608 CATCGCTCGACAAACCAACAT 59.535 47.619 0.00 0.00 0.00 2.71
5071 5892 0.865111 TCGCTCGACAAACCAACATG 59.135 50.000 0.00 0.00 0.00 3.21
5072 5893 0.865111 CGCTCGACAAACCAACATGA 59.135 50.000 0.00 0.00 0.00 3.07
5073 5894 1.262950 CGCTCGACAAACCAACATGAA 59.737 47.619 0.00 0.00 0.00 2.57
5074 5895 2.286713 CGCTCGACAAACCAACATGAAA 60.287 45.455 0.00 0.00 0.00 2.69
5075 5896 3.042887 GCTCGACAAACCAACATGAAAC 58.957 45.455 0.00 0.00 0.00 2.78
5076 5897 3.628017 CTCGACAAACCAACATGAAACC 58.372 45.455 0.00 0.00 0.00 3.27
5077 5898 2.032302 TCGACAAACCAACATGAAACCG 59.968 45.455 0.00 0.00 0.00 4.44
5078 5899 2.738135 GACAAACCAACATGAAACCGG 58.262 47.619 0.00 0.00 0.00 5.28
5079 5900 1.410882 ACAAACCAACATGAAACCGGG 59.589 47.619 6.32 0.00 0.00 5.73
5080 5901 1.044611 AAACCAACATGAAACCGGGG 58.955 50.000 6.32 0.00 0.00 5.73
5083 5904 1.203125 ACCAACATGAAACCGGGGAAT 60.203 47.619 6.32 0.00 0.00 3.01
5088 5909 1.745087 CATGAAACCGGGGAATGTCTG 59.255 52.381 6.32 0.00 0.00 3.51
5089 5910 1.060729 TGAAACCGGGGAATGTCTGA 58.939 50.000 6.32 0.00 0.00 3.27
5092 5913 0.613777 AACCGGGGAATGTCTGAGAC 59.386 55.000 6.32 5.47 0.00 3.36
5095 5916 0.460987 CGGGGAATGTCTGAGACAGC 60.461 60.000 20.90 14.41 46.04 4.40
5099 5920 2.027745 GGGAATGTCTGAGACAGCTTGA 60.028 50.000 20.90 0.00 46.04 3.02
5122 5943 4.277239 CGCCACATCGGACTTTGA 57.723 55.556 0.00 0.00 36.56 2.69
5123 5944 1.787847 CGCCACATCGGACTTTGAC 59.212 57.895 0.00 0.00 36.56 3.18
5124 5945 0.948623 CGCCACATCGGACTTTGACA 60.949 55.000 0.00 0.00 36.56 3.58
5125 5946 0.798776 GCCACATCGGACTTTGACAG 59.201 55.000 0.00 0.00 36.56 3.51
5126 5947 0.798776 CCACATCGGACTTTGACAGC 59.201 55.000 0.00 0.00 36.56 4.40
5127 5948 0.798776 CACATCGGACTTTGACAGCC 59.201 55.000 0.00 0.00 0.00 4.85
5128 5949 0.321653 ACATCGGACTTTGACAGCCC 60.322 55.000 0.00 0.00 0.00 5.19
5129 5950 1.079127 ATCGGACTTTGACAGCCCG 60.079 57.895 0.00 0.00 41.36 6.13
5130 5951 2.521958 ATCGGACTTTGACAGCCCGG 62.522 60.000 0.00 0.00 40.48 5.73
5131 5952 2.359975 GGACTTTGACAGCCCGGG 60.360 66.667 19.09 19.09 0.00 5.73
5132 5953 3.056328 GACTTTGACAGCCCGGGC 61.056 66.667 39.29 39.29 42.33 6.13
5133 5954 4.660938 ACTTTGACAGCCCGGGCC 62.661 66.667 41.72 26.88 43.17 5.80
5134 5955 4.351054 CTTTGACAGCCCGGGCCT 62.351 66.667 41.72 27.71 43.17 5.19
5135 5956 4.344865 TTTGACAGCCCGGGCCTC 62.345 66.667 41.72 33.44 43.17 4.70
5143 5964 3.979497 CCCGGGCCTCCCAAAACT 61.979 66.667 8.08 0.00 45.83 2.66
5144 5965 2.117423 CCGGGCCTCCCAAAACTT 59.883 61.111 0.84 0.00 45.83 2.66
5145 5966 1.977009 CCGGGCCTCCCAAAACTTC 60.977 63.158 0.84 0.00 45.83 3.01
5146 5967 1.074951 CGGGCCTCCCAAAACTTCT 59.925 57.895 0.84 0.00 45.83 2.85
5147 5968 0.960861 CGGGCCTCCCAAAACTTCTC 60.961 60.000 0.84 0.00 45.83 2.87
5148 5969 0.405973 GGGCCTCCCAAAACTTCTCT 59.594 55.000 0.84 0.00 44.65 3.10
5149 5970 1.614583 GGGCCTCCCAAAACTTCTCTC 60.615 57.143 0.84 0.00 44.65 3.20
5150 5971 1.352687 GGCCTCCCAAAACTTCTCTCT 59.647 52.381 0.00 0.00 0.00 3.10
5151 5972 2.616765 GGCCTCCCAAAACTTCTCTCTC 60.617 54.545 0.00 0.00 0.00 3.20
5152 5973 2.933056 GCCTCCCAAAACTTCTCTCTCG 60.933 54.545 0.00 0.00 0.00 4.04
5153 5974 2.300437 CCTCCCAAAACTTCTCTCTCGT 59.700 50.000 0.00 0.00 0.00 4.18
5154 5975 3.580731 CTCCCAAAACTTCTCTCTCGTC 58.419 50.000 0.00 0.00 0.00 4.20
5155 5976 2.030185 TCCCAAAACTTCTCTCTCGTCG 60.030 50.000 0.00 0.00 0.00 5.12
5156 5977 2.288273 CCCAAAACTTCTCTCTCGTCGT 60.288 50.000 0.00 0.00 0.00 4.34
5157 5978 3.381949 CCAAAACTTCTCTCTCGTCGTT 58.618 45.455 0.00 0.00 0.00 3.85
5158 5979 3.802685 CCAAAACTTCTCTCTCGTCGTTT 59.197 43.478 0.00 0.00 0.00 3.60
5159 5980 4.318121 CCAAAACTTCTCTCTCGTCGTTTG 60.318 45.833 0.00 0.00 0.00 2.93
5160 5981 2.708386 ACTTCTCTCTCGTCGTTTGG 57.292 50.000 0.00 0.00 0.00 3.28
5161 5982 2.228059 ACTTCTCTCTCGTCGTTTGGA 58.772 47.619 0.00 0.00 0.00 3.53
5162 5983 2.226912 ACTTCTCTCTCGTCGTTTGGAG 59.773 50.000 0.00 0.00 0.00 3.86
5163 5984 2.180432 TCTCTCTCGTCGTTTGGAGA 57.820 50.000 0.00 1.66 37.69 3.71
5164 5985 2.501261 TCTCTCTCGTCGTTTGGAGAA 58.499 47.619 0.00 0.00 38.72 2.87
5165 5986 2.225963 TCTCTCTCGTCGTTTGGAGAAC 59.774 50.000 0.00 0.00 38.72 3.01
5166 5987 2.226912 CTCTCTCGTCGTTTGGAGAACT 59.773 50.000 0.00 0.00 38.72 3.01
5167 5988 2.225963 TCTCTCGTCGTTTGGAGAACTC 59.774 50.000 0.00 0.00 38.72 3.01
5168 5989 2.226912 CTCTCGTCGTTTGGAGAACTCT 59.773 50.000 1.86 0.00 38.72 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 7.415004 AATATTTGAGTACCCCATAATCCCA 57.585 36.000 0.00 0.00 0.00 4.37
42 43 8.721133 AAAATATTTGAGTACCCCATAATCCC 57.279 34.615 0.39 0.00 0.00 3.85
43 44 8.803235 GGAAAATATTTGAGTACCCCATAATCC 58.197 37.037 0.39 0.00 0.00 3.01
44 45 9.588096 AGGAAAATATTTGAGTACCCCATAATC 57.412 33.333 0.39 0.00 0.00 1.75
45 46 9.951866 AAGGAAAATATTTGAGTACCCCATAAT 57.048 29.630 0.39 0.00 0.00 1.28
46 47 9.777008 AAAGGAAAATATTTGAGTACCCCATAA 57.223 29.630 0.39 0.00 0.00 1.90
47 48 9.196139 CAAAGGAAAATATTTGAGTACCCCATA 57.804 33.333 0.39 0.00 38.42 2.74
48 49 7.364673 GCAAAGGAAAATATTTGAGTACCCCAT 60.365 37.037 0.39 0.00 38.42 4.00
246 254 1.403687 CGGAGGGGGATGGAGAAGAC 61.404 65.000 0.00 0.00 0.00 3.01
276 284 1.355916 CGAATCGAGACGGGAGGAC 59.644 63.158 0.00 0.00 0.00 3.85
367 585 0.249322 CGTGGGTATGTCGGATCACC 60.249 60.000 0.00 0.00 0.00 4.02
475 696 2.487746 TCCCCTCATATGCTACCACA 57.512 50.000 0.00 0.00 0.00 4.17
504 726 2.256461 GGGCAGAGCAAAACAGCG 59.744 61.111 0.00 0.00 40.15 5.18
522 744 0.323725 TGAGCCCTTGATCCAAAGCC 60.324 55.000 0.00 0.00 0.00 4.35
524 746 2.305009 GGATGAGCCCTTGATCCAAAG 58.695 52.381 0.00 0.00 36.43 2.77
525 747 2.442236 GGATGAGCCCTTGATCCAAA 57.558 50.000 0.00 0.00 36.43 3.28
561 785 7.397192 ACAGCCAAAATACTCTAAAATGGACAT 59.603 33.333 0.00 0.00 0.00 3.06
608 832 2.818130 TGTCAAAAGGAGCAAATGGC 57.182 45.000 0.00 0.00 45.30 4.40
619 843 6.917533 AGTGCTCCAATCTAAATGTCAAAAG 58.082 36.000 0.00 0.00 0.00 2.27
647 871 5.986004 ACTCTAAACACAAACACAGCTAC 57.014 39.130 0.00 0.00 0.00 3.58
787 1011 1.313091 GGAATTCCAACTCCACGCCC 61.313 60.000 20.04 0.00 35.64 6.13
805 1029 0.895530 TAAGCGGTTCTGTCCTCAGG 59.104 55.000 1.59 0.00 41.59 3.86
885 1111 2.681848 GTGGCTCCAATCACTTCATCTG 59.318 50.000 0.00 0.00 0.00 2.90
928 1154 3.957497 GACATCACCTCTCTGATACCACT 59.043 47.826 0.00 0.00 29.28 4.00
929 1155 3.957497 AGACATCACCTCTCTGATACCAC 59.043 47.826 0.00 0.00 29.28 4.16
934 1160 4.019501 AGCAAAAGACATCACCTCTCTGAT 60.020 41.667 0.00 0.00 0.00 2.90
959 1185 4.099120 CACGCATGTACAGTTCTAGAGTC 58.901 47.826 0.33 0.00 0.00 3.36
1030 1256 0.708802 TCCTTAACCGACCCCTCTCT 59.291 55.000 0.00 0.00 0.00 3.10
1074 1300 1.067821 GAGTACGCCATCTTGGGAGAG 59.932 57.143 0.00 0.00 38.19 3.20
1179 1405 3.204158 TGTGGGACAATATAGTTGCCCAT 59.796 43.478 18.82 0.00 44.16 4.00
1193 1419 1.005037 CTAGCGTGCTTGTGGGACA 60.005 57.895 0.00 0.00 35.96 4.02
1233 1459 2.514458 TTTTCCAGCTCATCCCCTTC 57.486 50.000 0.00 0.00 0.00 3.46
1243 1469 2.105766 GATCATGGCCTTTTTCCAGCT 58.894 47.619 3.32 0.00 36.98 4.24
1273 1499 6.231951 TGAAAATGCCAATCATGAAACACAT 58.768 32.000 0.00 0.00 40.17 3.21
1314 1540 5.833406 TGTTTGACAAATCAGCAGAGAAA 57.167 34.783 3.49 0.00 35.83 2.52
1371 1597 1.673033 CGTCTATCAATCGCATCCCCC 60.673 57.143 0.00 0.00 0.00 5.40
1379 1605 3.555547 TGCCATTTGTCGTCTATCAATCG 59.444 43.478 0.00 0.00 0.00 3.34
1400 1626 1.068055 GCTTGGTGCCTTGATGTTCTG 60.068 52.381 0.00 0.00 35.15 3.02
1473 1699 0.461961 GAACTGGGGGACTCTCATCG 59.538 60.000 0.00 0.00 0.00 3.84
1476 1702 1.868810 AGGAACTGGGGGACTCTCA 59.131 57.895 0.00 0.00 37.18 3.27
1635 1861 3.620374 CCTTCAAGACATGAATCAGACGG 59.380 47.826 0.00 0.00 46.62 4.79
1866 2092 4.143543 CTGAGTATGCTCTCTCCTCATCA 58.856 47.826 12.30 0.00 42.13 3.07
1954 2183 8.798859 AGAGAAATTACTAGTTTGCATCATGT 57.201 30.769 0.00 0.00 0.00 3.21
1973 2202 7.110155 ACCAAGTTAAAGAGTGTCAAGAGAAA 58.890 34.615 0.00 0.00 0.00 2.52
1974 2203 6.650120 ACCAAGTTAAAGAGTGTCAAGAGAA 58.350 36.000 0.00 0.00 0.00 2.87
1975 2204 6.235231 ACCAAGTTAAAGAGTGTCAAGAGA 57.765 37.500 0.00 0.00 0.00 3.10
1976 2205 6.984474 TGTACCAAGTTAAAGAGTGTCAAGAG 59.016 38.462 0.00 0.00 0.00 2.85
2040 2269 5.897050 AGCCGACAAACAATAGTTTTCAAA 58.103 33.333 0.00 0.00 45.32 2.69
2076 2305 4.625311 CGTCAACATGCAGTGAGTAATACA 59.375 41.667 0.00 0.00 0.00 2.29
2175 2407 6.255215 TCTAGCATTTAAAACATTACGCAGC 58.745 36.000 0.00 0.00 0.00 5.25
2258 2490 4.826274 TTCTATGTCAAACTCCCTCCAG 57.174 45.455 0.00 0.00 0.00 3.86
2263 2495 4.458989 TGTGCATTTCTATGTCAAACTCCC 59.541 41.667 0.00 0.00 34.12 4.30
2292 2524 9.249457 GACAAAAGTGAAATAAAGGAAGAAAGG 57.751 33.333 0.00 0.00 0.00 3.11
2490 2722 7.011109 GCAAGACGCTTTACTGGATATCTTTAA 59.989 37.037 2.05 0.00 37.77 1.52
2509 2741 5.618561 GGTTATGACTAAACAAGCAAGACG 58.381 41.667 0.00 0.00 0.00 4.18
2636 2868 3.242712 CGTGTCAAAAATCACAAGCCAAC 59.757 43.478 0.00 0.00 34.66 3.77
2688 2920 3.879912 GCATCAGCACAGCAACTTT 57.120 47.368 0.00 0.00 41.58 2.66
2721 2953 7.015779 AGTGAGGATAAGGACTAAATCTTAGGC 59.984 40.741 0.00 0.00 0.00 3.93
2779 3011 0.537143 ACAACTTCTGATTGGCCGCA 60.537 50.000 0.00 0.00 0.00 5.69
2780 3012 0.169009 GACAACTTCTGATTGGCCGC 59.831 55.000 0.00 0.00 0.00 6.53
2788 3020 8.816894 AGATAAATAACTCCTGACAACTTCTGA 58.183 33.333 0.00 0.00 0.00 3.27
2878 3110 9.927081 ACCAACCTTCTATCTATTCAATGAATT 57.073 29.630 14.15 0.00 33.95 2.17
2879 3111 9.566432 GACCAACCTTCTATCTATTCAATGAAT 57.434 33.333 13.43 13.43 36.20 2.57
2880 3112 7.993183 GGACCAACCTTCTATCTATTCAATGAA 59.007 37.037 0.00 0.00 35.41 2.57
2881 3113 7.127186 TGGACCAACCTTCTATCTATTCAATGA 59.873 37.037 0.00 0.00 39.86 2.57
2882 3114 7.282585 TGGACCAACCTTCTATCTATTCAATG 58.717 38.462 0.00 0.00 39.86 2.82
2883 3115 7.127955 ACTGGACCAACCTTCTATCTATTCAAT 59.872 37.037 0.00 0.00 39.86 2.57
2884 3116 6.443849 ACTGGACCAACCTTCTATCTATTCAA 59.556 38.462 0.00 0.00 39.86 2.69
2885 3117 5.964477 ACTGGACCAACCTTCTATCTATTCA 59.036 40.000 0.00 0.00 39.86 2.57
2886 3118 6.487299 ACTGGACCAACCTTCTATCTATTC 57.513 41.667 0.00 0.00 39.86 1.75
2887 3119 6.893020 AACTGGACCAACCTTCTATCTATT 57.107 37.500 0.00 0.00 39.86 1.73
2888 3120 6.893020 AAACTGGACCAACCTTCTATCTAT 57.107 37.500 0.00 0.00 39.86 1.98
2889 3121 7.622081 TCATAAACTGGACCAACCTTCTATCTA 59.378 37.037 0.00 0.00 39.86 1.98
2890 3122 6.443849 TCATAAACTGGACCAACCTTCTATCT 59.556 38.462 0.00 0.00 39.86 1.98
2891 3123 6.650120 TCATAAACTGGACCAACCTTCTATC 58.350 40.000 0.00 0.00 39.86 2.08
2892 3124 6.353082 CCTCATAAACTGGACCAACCTTCTAT 60.353 42.308 0.00 0.00 39.86 1.98
2893 3125 5.045869 CCTCATAAACTGGACCAACCTTCTA 60.046 44.000 0.00 0.00 39.86 2.10
2894 3126 4.263506 CCTCATAAACTGGACCAACCTTCT 60.264 45.833 0.00 0.00 39.86 2.85
2895 3127 4.010349 CCTCATAAACTGGACCAACCTTC 58.990 47.826 0.00 0.00 39.86 3.46
2896 3128 3.245264 CCCTCATAAACTGGACCAACCTT 60.245 47.826 0.00 0.00 39.86 3.50
2897 3129 2.308866 CCCTCATAAACTGGACCAACCT 59.691 50.000 0.00 0.00 39.86 3.50
2898 3130 2.307686 TCCCTCATAAACTGGACCAACC 59.692 50.000 0.00 0.00 39.54 3.77
2899 3131 3.713826 TCCCTCATAAACTGGACCAAC 57.286 47.619 0.00 0.00 0.00 3.77
2900 3132 4.403734 GTTTCCCTCATAAACTGGACCAA 58.596 43.478 0.00 0.00 34.66 3.67
2901 3133 3.245122 GGTTTCCCTCATAAACTGGACCA 60.245 47.826 0.00 0.00 37.09 4.02
2902 3134 3.353557 GGTTTCCCTCATAAACTGGACC 58.646 50.000 0.00 0.00 37.09 4.46
2903 3135 3.007635 CGGTTTCCCTCATAAACTGGAC 58.992 50.000 0.00 0.00 38.82 4.02
2904 3136 3.343941 CGGTTTCCCTCATAAACTGGA 57.656 47.619 0.00 0.00 38.82 3.86
2906 3138 3.007635 GTCCGGTTTCCCTCATAAACTG 58.992 50.000 0.00 0.00 41.06 3.16
2907 3139 2.026542 GGTCCGGTTTCCCTCATAAACT 60.027 50.000 0.00 0.00 37.09 2.66
2908 3140 2.362736 GGTCCGGTTTCCCTCATAAAC 58.637 52.381 0.00 0.00 36.34 2.01
2909 3141 1.282738 GGGTCCGGTTTCCCTCATAAA 59.717 52.381 19.43 0.00 40.48 1.40
2910 3142 0.913924 GGGTCCGGTTTCCCTCATAA 59.086 55.000 19.43 0.00 40.48 1.90
2911 3143 0.252789 TGGGTCCGGTTTCCCTCATA 60.253 55.000 24.17 8.83 43.74 2.15
2912 3144 1.137594 TTGGGTCCGGTTTCCCTCAT 61.138 55.000 24.17 0.00 43.74 2.90
2913 3145 1.354168 TTTGGGTCCGGTTTCCCTCA 61.354 55.000 24.17 13.51 43.74 3.86
2914 3146 0.178984 TTTTGGGTCCGGTTTCCCTC 60.179 55.000 24.17 7.61 43.74 4.30
2915 3147 0.262285 TTTTTGGGTCCGGTTTCCCT 59.738 50.000 24.17 0.00 43.74 4.20
2916 3148 0.390124 GTTTTTGGGTCCGGTTTCCC 59.610 55.000 19.73 19.73 43.67 3.97
2917 3149 0.390124 GGTTTTTGGGTCCGGTTTCC 59.610 55.000 0.00 2.73 0.00 3.13
2918 3150 1.112950 TGGTTTTTGGGTCCGGTTTC 58.887 50.000 0.00 0.00 0.00 2.78
2919 3151 1.796017 ATGGTTTTTGGGTCCGGTTT 58.204 45.000 0.00 0.00 0.00 3.27
2920 3152 2.158430 AGTATGGTTTTTGGGTCCGGTT 60.158 45.455 0.00 0.00 0.00 4.44
2921 3153 1.426215 AGTATGGTTTTTGGGTCCGGT 59.574 47.619 0.00 0.00 0.00 5.28
2922 3154 2.209690 AGTATGGTTTTTGGGTCCGG 57.790 50.000 0.00 0.00 0.00 5.14
2923 3155 2.888414 ACAAGTATGGTTTTTGGGTCCG 59.112 45.455 0.00 0.00 0.00 4.79
2924 3156 4.502431 CCAACAAGTATGGTTTTTGGGTCC 60.502 45.833 0.00 0.00 33.08 4.46
2925 3157 4.627058 CCAACAAGTATGGTTTTTGGGTC 58.373 43.478 0.00 0.00 33.08 4.46
2926 3158 4.681074 CCAACAAGTATGGTTTTTGGGT 57.319 40.909 0.00 0.00 33.08 4.51
2935 3167 9.787532 CTGAAATTACATAACCAACAAGTATGG 57.212 33.333 0.00 0.00 43.84 2.74
2978 3210 5.068460 AGCAGACAACAGTCATCCTCTATAC 59.932 44.000 0.00 0.00 34.69 1.47
2991 3223 0.250209 ACTCCAGCAGCAGACAACAG 60.250 55.000 0.00 0.00 0.00 3.16
3002 3234 5.192927 TCAGAAAAGAAAAGAACTCCAGCA 58.807 37.500 0.00 0.00 0.00 4.41
3003 3235 5.757850 TCAGAAAAGAAAAGAACTCCAGC 57.242 39.130 0.00 0.00 0.00 4.85
3004 3236 9.890352 CTAAATCAGAAAAGAAAAGAACTCCAG 57.110 33.333 0.00 0.00 0.00 3.86
3005 3237 9.408648 ACTAAATCAGAAAAGAAAAGAACTCCA 57.591 29.630 0.00 0.00 0.00 3.86
3032 3267 8.599624 TCTTAACCGGGATTATATAACCTAGG 57.400 38.462 7.41 7.41 0.00 3.02
3064 3299 5.806654 ATGTTTGGCATCCTTTGTACTTT 57.193 34.783 0.00 0.00 30.67 2.66
3081 3316 6.403866 TTCACCTGATAGCAAACAATGTTT 57.596 33.333 5.41 5.41 0.00 2.83
3092 3327 4.187694 CTCTCTTGGTTTCACCTGATAGC 58.812 47.826 0.00 0.00 39.58 2.97
3093 3328 4.223923 ACCTCTCTTGGTTTCACCTGATAG 59.776 45.833 0.00 0.00 39.58 2.08
3094 3329 4.020218 CACCTCTCTTGGTTTCACCTGATA 60.020 45.833 0.00 0.00 39.58 2.15
3095 3330 2.982488 ACCTCTCTTGGTTTCACCTGAT 59.018 45.455 0.00 0.00 39.58 2.90
3096 3331 2.104792 CACCTCTCTTGGTTTCACCTGA 59.895 50.000 0.00 0.00 39.58 3.86
3097 3332 2.104792 TCACCTCTCTTGGTTTCACCTG 59.895 50.000 0.00 0.00 39.58 4.00
3098 3333 2.408565 TCACCTCTCTTGGTTTCACCT 58.591 47.619 0.00 0.00 39.58 4.00
3099 3334 2.930826 TCACCTCTCTTGGTTTCACC 57.069 50.000 0.00 0.00 38.45 4.02
3126 3361 7.757173 TCAACTTTCGATGTGAAATTTCAAACA 59.243 29.630 22.07 16.68 45.21 2.83
3131 3366 8.114359 TGTTTCAACTTTCGATGTGAAATTTC 57.886 30.769 11.41 11.41 45.21 2.17
3132 3367 8.647143 ATGTTTCAACTTTCGATGTGAAATTT 57.353 26.923 13.16 0.00 45.21 1.82
3144 3379 6.363577 TCAGTGACAGATGTTTCAACTTTC 57.636 37.500 0.00 0.00 0.00 2.62
3150 3385 3.118075 TGGGTTCAGTGACAGATGTTTCA 60.118 43.478 0.00 0.00 0.00 2.69
3189 3432 5.567138 GAGAGATGCTCTTAGAGGATAGC 57.433 47.826 16.02 10.89 40.67 2.97
3314 3557 4.412843 CTTACAAAGGGGGCCTTCTAAAA 58.587 43.478 0.84 0.00 43.92 1.52
3318 3561 0.704664 CCTTACAAAGGGGGCCTTCT 59.295 55.000 0.84 0.00 43.92 2.85
3371 3614 1.370172 CGACGCGGTATACTGCTCC 60.370 63.158 29.22 20.29 45.75 4.70
3383 3626 0.446222 ACCAATTGGAAATCGACGCG 59.554 50.000 31.22 3.53 38.94 6.01
3384 3627 2.629639 AACCAATTGGAAATCGACGC 57.370 45.000 31.22 0.00 38.94 5.19
3444 3687 0.914644 TGGGGCTCTTCCATCTCTTG 59.085 55.000 0.00 0.00 36.21 3.02
3462 3705 4.342951 TGGAGTATAATAGACCCAACGGTG 59.657 45.833 0.00 0.00 44.88 4.94
3465 3708 6.755206 TGAATGGAGTATAATAGACCCAACG 58.245 40.000 0.00 0.00 0.00 4.10
3468 3711 6.270000 CACCTGAATGGAGTATAATAGACCCA 59.730 42.308 0.00 0.00 39.71 4.51
3566 3810 7.744087 TTCAAGCAAAAGCTAAGAAGATACA 57.256 32.000 0.00 0.00 0.00 2.29
3567 3811 9.631452 ATTTTCAAGCAAAAGCTAAGAAGATAC 57.369 29.630 0.00 0.00 37.40 2.24
3645 3890 7.368833 ACTCCTCCGTATCAAAATATAAGACG 58.631 38.462 0.00 0.00 0.00 4.18
3662 3907 5.063564 GCAATTACAAAGAACTACTCCTCCG 59.936 44.000 0.00 0.00 0.00 4.63
3699 3945 9.632969 CGTAATTGATAACAATACTGCAGTTAC 57.367 33.333 27.06 14.60 44.67 2.50
3700 3946 8.332464 GCGTAATTGATAACAATACTGCAGTTA 58.668 33.333 27.06 11.37 44.67 2.24
3709 3955 8.600625 GTTCACAGAGCGTAATTGATAACAATA 58.399 33.333 0.00 0.00 44.67 1.90
3710 3956 7.464358 GTTCACAGAGCGTAATTGATAACAAT 58.536 34.615 0.00 0.00 46.99 2.71
3728 3974 5.212194 CCCAACAGATTTTTACGTTCACAG 58.788 41.667 0.00 0.00 0.00 3.66
3739 3985 3.039252 TGGTTCACCCCAACAGATTTT 57.961 42.857 0.00 0.00 34.29 1.82
3740 3986 2.765689 TGGTTCACCCCAACAGATTT 57.234 45.000 0.00 0.00 34.29 2.17
3782 4028 0.392193 ATTGGCTCCACTTGCTCTCG 60.392 55.000 0.00 0.00 0.00 4.04
3793 4039 6.299141 TCCTTTAGATCATTGTATTGGCTCC 58.701 40.000 0.00 0.00 0.00 4.70
3794 4040 7.500559 AGTTCCTTTAGATCATTGTATTGGCTC 59.499 37.037 0.00 0.00 0.00 4.70
3821 4067 7.866393 CGACTTATATTTCGGAACAGAGGTAAT 59.134 37.037 0.00 0.00 0.00 1.89
3822 4068 7.148018 ACGACTTATATTTCGGAACAGAGGTAA 60.148 37.037 8.03 0.00 39.63 2.85
3823 4069 6.319658 ACGACTTATATTTCGGAACAGAGGTA 59.680 38.462 8.03 0.00 39.63 3.08
3824 4070 5.126707 ACGACTTATATTTCGGAACAGAGGT 59.873 40.000 8.03 0.00 39.63 3.85
3825 4071 5.589192 ACGACTTATATTTCGGAACAGAGG 58.411 41.667 8.03 0.00 39.63 3.69
3826 4072 7.391786 CAAACGACTTATATTTCGGAACAGAG 58.608 38.462 8.03 0.00 39.63 3.35
3827 4073 6.311935 CCAAACGACTTATATTTCGGAACAGA 59.688 38.462 8.03 0.00 39.63 3.41
3828 4074 6.456449 CCCAAACGACTTATATTTCGGAACAG 60.456 42.308 8.03 0.00 39.63 3.16
3829 4075 5.352016 CCCAAACGACTTATATTTCGGAACA 59.648 40.000 8.03 0.00 39.63 3.18
3830 4076 5.220719 CCCCAAACGACTTATATTTCGGAAC 60.221 44.000 8.03 0.00 39.63 3.62
3831 4077 4.877251 CCCCAAACGACTTATATTTCGGAA 59.123 41.667 8.03 0.00 39.63 4.30
3832 4078 4.161942 TCCCCAAACGACTTATATTTCGGA 59.838 41.667 8.03 0.00 39.63 4.55
3833 4079 4.444536 TCCCCAAACGACTTATATTTCGG 58.555 43.478 8.03 0.00 39.63 4.30
3834 4080 5.114081 ACTCCCCAAACGACTTATATTTCG 58.886 41.667 0.00 2.73 41.14 3.46
3835 4081 6.596497 TGAACTCCCCAAACGACTTATATTTC 59.404 38.462 0.00 0.00 0.00 2.17
3836 4082 6.478129 TGAACTCCCCAAACGACTTATATTT 58.522 36.000 0.00 0.00 0.00 1.40
3837 4083 6.057321 TGAACTCCCCAAACGACTTATATT 57.943 37.500 0.00 0.00 0.00 1.28
3838 4084 5.189145 ACTGAACTCCCCAAACGACTTATAT 59.811 40.000 0.00 0.00 0.00 0.86
3839 4085 4.529377 ACTGAACTCCCCAAACGACTTATA 59.471 41.667 0.00 0.00 0.00 0.98
3840 4086 3.326880 ACTGAACTCCCCAAACGACTTAT 59.673 43.478 0.00 0.00 0.00 1.73
3841 4087 2.701951 ACTGAACTCCCCAAACGACTTA 59.298 45.455 0.00 0.00 0.00 2.24
3842 4088 1.489230 ACTGAACTCCCCAAACGACTT 59.511 47.619 0.00 0.00 0.00 3.01
3843 4089 1.129058 ACTGAACTCCCCAAACGACT 58.871 50.000 0.00 0.00 0.00 4.18
3844 4090 1.963172 AACTGAACTCCCCAAACGAC 58.037 50.000 0.00 0.00 0.00 4.34
3845 4091 2.721425 AAACTGAACTCCCCAAACGA 57.279 45.000 0.00 0.00 0.00 3.85
3846 4092 3.002965 GTGTAAACTGAACTCCCCAAACG 59.997 47.826 0.00 0.00 0.00 3.60
3847 4093 4.204799 AGTGTAAACTGAACTCCCCAAAC 58.795 43.478 0.00 0.00 0.00 2.93
3848 4094 4.457466 GAGTGTAAACTGAACTCCCCAAA 58.543 43.478 0.00 0.00 35.36 3.28
3849 4095 4.081322 GAGTGTAAACTGAACTCCCCAA 57.919 45.455 0.00 0.00 35.36 4.12
3850 4096 3.764237 GAGTGTAAACTGAACTCCCCA 57.236 47.619 0.00 0.00 35.36 4.96
3854 4100 2.370849 TGGGGGAGTGTAAACTGAACTC 59.629 50.000 0.00 0.00 39.70 3.01
3855 4101 2.414612 TGGGGGAGTGTAAACTGAACT 58.585 47.619 0.00 0.00 0.00 3.01
3856 4102 2.882761 GTTGGGGGAGTGTAAACTGAAC 59.117 50.000 0.00 0.00 0.00 3.18
3857 4103 2.485835 CGTTGGGGGAGTGTAAACTGAA 60.486 50.000 0.00 0.00 0.00 3.02
3858 4104 1.071071 CGTTGGGGGAGTGTAAACTGA 59.929 52.381 0.00 0.00 0.00 3.41
3859 4105 1.071071 TCGTTGGGGGAGTGTAAACTG 59.929 52.381 0.00 0.00 0.00 3.16
3860 4106 1.071228 GTCGTTGGGGGAGTGTAAACT 59.929 52.381 0.00 0.00 0.00 2.66
3861 4107 1.071228 AGTCGTTGGGGGAGTGTAAAC 59.929 52.381 0.00 0.00 0.00 2.01
3862 4108 1.426751 AGTCGTTGGGGGAGTGTAAA 58.573 50.000 0.00 0.00 0.00 2.01
3863 4109 1.426751 AAGTCGTTGGGGGAGTGTAA 58.573 50.000 0.00 0.00 0.00 2.41
3864 4110 2.307496 TAAGTCGTTGGGGGAGTGTA 57.693 50.000 0.00 0.00 0.00 2.90
3865 4111 1.652947 ATAAGTCGTTGGGGGAGTGT 58.347 50.000 0.00 0.00 0.00 3.55
3866 4112 4.417426 AATATAAGTCGTTGGGGGAGTG 57.583 45.455 0.00 0.00 0.00 3.51
3867 4113 5.901276 TCTAAATATAAGTCGTTGGGGGAGT 59.099 40.000 0.00 0.00 0.00 3.85
3868 4114 6.415206 TCTAAATATAAGTCGTTGGGGGAG 57.585 41.667 0.00 0.00 0.00 4.30
3869 4115 6.811634 TTCTAAATATAAGTCGTTGGGGGA 57.188 37.500 0.00 0.00 0.00 4.81
3870 4116 6.018507 CGTTTCTAAATATAAGTCGTTGGGGG 60.019 42.308 0.00 0.00 0.00 5.40
3871 4117 6.018507 CCGTTTCTAAATATAAGTCGTTGGGG 60.019 42.308 0.00 0.00 0.00 4.96
3872 4118 6.757947 TCCGTTTCTAAATATAAGTCGTTGGG 59.242 38.462 0.00 0.00 0.00 4.12
3873 4119 7.042925 CCTCCGTTTCTAAATATAAGTCGTTGG 60.043 40.741 0.00 0.00 0.00 3.77
3874 4120 7.042925 CCCTCCGTTTCTAAATATAAGTCGTTG 60.043 40.741 0.00 0.00 0.00 4.10
3875 4121 6.982724 CCCTCCGTTTCTAAATATAAGTCGTT 59.017 38.462 0.00 0.00 0.00 3.85
3876 4122 6.322201 TCCCTCCGTTTCTAAATATAAGTCGT 59.678 38.462 0.00 0.00 0.00 4.34
3877 4123 6.742109 TCCCTCCGTTTCTAAATATAAGTCG 58.258 40.000 0.00 0.00 0.00 4.18
3878 4124 7.724287 ACTCCCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
3879 4125 7.672122 ACTCCCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
3880 4126 9.075678 TCTACTCCCTCCGTTTCTAAATATAAG 57.924 37.037 0.00 0.00 0.00 1.73
3881 4127 9.425248 TTCTACTCCCTCCGTTTCTAAATATAA 57.575 33.333 0.00 0.00 0.00 0.98
3882 4128 8.854117 GTTCTACTCCCTCCGTTTCTAAATATA 58.146 37.037 0.00 0.00 0.00 0.86
3883 4129 7.343833 TGTTCTACTCCCTCCGTTTCTAAATAT 59.656 37.037 0.00 0.00 0.00 1.28
3884 4130 6.664816 TGTTCTACTCCCTCCGTTTCTAAATA 59.335 38.462 0.00 0.00 0.00 1.40
3885 4131 5.482878 TGTTCTACTCCCTCCGTTTCTAAAT 59.517 40.000 0.00 0.00 0.00 1.40
3886 4132 4.834496 TGTTCTACTCCCTCCGTTTCTAAA 59.166 41.667 0.00 0.00 0.00 1.85
3887 4133 4.410099 TGTTCTACTCCCTCCGTTTCTAA 58.590 43.478 0.00 0.00 0.00 2.10
3888 4134 4.038271 TGTTCTACTCCCTCCGTTTCTA 57.962 45.455 0.00 0.00 0.00 2.10
3889 4135 2.885616 TGTTCTACTCCCTCCGTTTCT 58.114 47.619 0.00 0.00 0.00 2.52
3890 4136 3.889520 ATGTTCTACTCCCTCCGTTTC 57.110 47.619 0.00 0.00 0.00 2.78
3891 4137 3.132467 GCTATGTTCTACTCCCTCCGTTT 59.868 47.826 0.00 0.00 0.00 3.60
3892 4138 2.694109 GCTATGTTCTACTCCCTCCGTT 59.306 50.000 0.00 0.00 0.00 4.44
3893 4139 2.308690 GCTATGTTCTACTCCCTCCGT 58.691 52.381 0.00 0.00 0.00 4.69
3894 4140 1.614413 GGCTATGTTCTACTCCCTCCG 59.386 57.143 0.00 0.00 0.00 4.63
3895 4141 2.679082 TGGCTATGTTCTACTCCCTCC 58.321 52.381 0.00 0.00 0.00 4.30
3896 4142 4.262678 GGAATGGCTATGTTCTACTCCCTC 60.263 50.000 0.00 0.00 0.00 4.30
3897 4143 3.648545 GGAATGGCTATGTTCTACTCCCT 59.351 47.826 0.00 0.00 0.00 4.20
3898 4144 3.555168 CGGAATGGCTATGTTCTACTCCC 60.555 52.174 0.00 0.00 0.00 4.30
3899 4145 3.069729 ACGGAATGGCTATGTTCTACTCC 59.930 47.826 0.00 0.00 0.00 3.85
3900 4146 4.323553 ACGGAATGGCTATGTTCTACTC 57.676 45.455 0.00 0.00 0.00 2.59
3941 4187 7.596995 GTACTCTAGTAATCATTGCCTTAGCAG 59.403 40.741 0.00 0.00 40.42 4.24
3986 4232 2.548493 GCAATGGCACCATGTTTCAGTT 60.548 45.455 2.19 0.00 40.72 3.16
4063 4309 0.036164 TACGGGTGCAATTGTCTGCT 59.964 50.000 7.40 0.00 43.07 4.24
4081 4327 8.972127 TCCAAATCGAAATTCCAAACCATAATA 58.028 29.630 0.00 0.00 0.00 0.98
4090 4336 4.219725 GGAGGTTCCAAATCGAAATTCCAA 59.780 41.667 0.00 0.00 36.28 3.53
4216 4462 4.500265 GCCAAGTTCAGGAAGGCA 57.500 55.556 6.05 0.00 44.59 4.75
4261 4507 2.205022 TTGAATCAGGTCTTGGCAGG 57.795 50.000 0.00 0.00 0.00 4.85
4280 4526 9.744468 GAACTTTTTACTGGTGTGACATTATTT 57.256 29.630 0.00 0.00 0.00 1.40
4309 4555 4.273480 TCTTCTTTTGTCAGGCTTCTTTCG 59.727 41.667 0.00 0.00 0.00 3.46
4331 4577 4.019231 AGAATGTAGAGTGAGGGGGTTTTC 60.019 45.833 0.00 0.00 0.00 2.29
4335 4581 2.950990 AGAATGTAGAGTGAGGGGGT 57.049 50.000 0.00 0.00 0.00 4.95
4362 4608 9.117183 CTGGATGAATATGAGTGAGAAATGAAA 57.883 33.333 0.00 0.00 0.00 2.69
4372 4618 7.172868 AGATCTAGCTGGATGAATATGAGTG 57.827 40.000 18.33 0.00 0.00 3.51
4395 4641 9.084533 AGAAAGAGTAAATATACAGAGGGCTAG 57.915 37.037 0.00 0.00 34.29 3.42
4404 4650 9.582431 CCGAAACAGAGAAAGAGTAAATATACA 57.418 33.333 0.00 0.00 34.29 2.29
4415 4661 3.447918 ACGAACCGAAACAGAGAAAGA 57.552 42.857 0.00 0.00 0.00 2.52
4422 4668 6.844279 GCATGTATAATAACGAACCGAAACAG 59.156 38.462 0.00 0.00 0.00 3.16
4510 4756 6.187125 GCTTTTGCTCATGTATCAAGAGAA 57.813 37.500 14.15 0.00 43.35 2.87
4525 4771 2.748532 TGCTTTTGCTTTTGCTTTTGCT 59.251 36.364 0.00 0.00 46.10 3.91
4594 4846 8.860780 AGAATTACAGCTGAGAAGAAAATTCT 57.139 30.769 23.35 20.70 37.52 2.40
4620 4872 1.956170 CAAGAGCAACGTCGCAGGT 60.956 57.895 0.00 0.00 0.00 4.00
4624 4876 1.215655 ACAGACAAGAGCAACGTCGC 61.216 55.000 0.00 0.00 34.80 5.19
4625 4877 0.504384 CACAGACAAGAGCAACGTCG 59.496 55.000 0.00 0.00 34.80 5.12
4638 4890 2.143925 GGCCAAACTCAGTACACAGAC 58.856 52.381 0.00 0.00 0.00 3.51
4750 5211 1.370900 GACGCTGCAGTGCCAAAAG 60.371 57.895 26.78 4.06 0.00 2.27
4752 5213 3.648982 CGACGCTGCAGTGCCAAA 61.649 61.111 26.78 0.00 0.00 3.28
4785 5281 1.672356 ACCATCGTTGAGCCACAGC 60.672 57.895 0.00 0.00 40.32 4.40
4805 5301 1.421268 ACCTCATCACCAGAACAGCAA 59.579 47.619 0.00 0.00 0.00 3.91
4813 5309 0.900421 TGAGCTGACCTCATCACCAG 59.100 55.000 0.00 0.00 45.44 4.00
4814 5310 3.071671 TGAGCTGACCTCATCACCA 57.928 52.632 0.00 0.00 45.44 4.17
4821 5317 1.227205 CCATCGCTGAGCTGACCTC 60.227 63.158 1.78 0.00 41.15 3.85
4823 5319 1.812922 CACCATCGCTGAGCTGACC 60.813 63.158 1.78 0.00 0.00 4.02
4824 5320 1.080995 GTCACCATCGCTGAGCTGAC 61.081 60.000 7.81 7.81 0.00 3.51
4845 5666 0.096976 TACTGTTACCGTACGAGCGC 59.903 55.000 18.76 0.00 0.00 5.92
4856 5677 4.802563 GTCCTTACTCCGCAATACTGTTAC 59.197 45.833 0.00 0.00 0.00 2.50
4862 5683 3.858247 AGTTGTCCTTACTCCGCAATAC 58.142 45.455 0.00 0.00 0.00 1.89
4880 5701 0.319083 TGGCGATACACGTTGGAGTT 59.681 50.000 0.00 0.00 44.60 3.01
4889 5710 0.248458 CGGGCAATTTGGCGATACAC 60.248 55.000 15.79 1.39 44.78 2.90
4895 5716 1.276415 CATTTACGGGCAATTTGGCG 58.724 50.000 15.79 13.25 44.78 5.69
4897 5718 3.249917 GACACATTTACGGGCAATTTGG 58.750 45.455 0.00 0.00 0.00 3.28
4898 5719 3.249917 GGACACATTTACGGGCAATTTG 58.750 45.455 0.00 0.00 0.00 2.32
4899 5720 2.094957 CGGACACATTTACGGGCAATTT 60.095 45.455 0.00 0.00 0.00 1.82
4900 5721 1.470890 CGGACACATTTACGGGCAATT 59.529 47.619 0.00 0.00 0.00 2.32
4901 5722 1.091537 CGGACACATTTACGGGCAAT 58.908 50.000 0.00 0.00 0.00 3.56
4902 5723 0.956410 CCGGACACATTTACGGGCAA 60.956 55.000 0.00 0.00 42.48 4.52
4903 5724 1.376166 CCGGACACATTTACGGGCA 60.376 57.895 0.00 0.00 42.48 5.36
4921 5742 5.506317 CCAAAAGTGTCTGGAATGTTCTGTC 60.506 44.000 0.00 0.00 34.35 3.51
4922 5743 4.339247 CCAAAAGTGTCTGGAATGTTCTGT 59.661 41.667 0.00 0.00 34.35 3.41
4923 5744 4.261741 CCCAAAAGTGTCTGGAATGTTCTG 60.262 45.833 0.00 0.00 34.35 3.02
4924 5745 3.891366 CCCAAAAGTGTCTGGAATGTTCT 59.109 43.478 0.00 0.00 34.35 3.01
4925 5746 3.552890 GCCCAAAAGTGTCTGGAATGTTC 60.553 47.826 0.00 0.00 34.35 3.18
4926 5747 2.365293 GCCCAAAAGTGTCTGGAATGTT 59.635 45.455 0.00 0.00 34.35 2.71
4927 5748 1.963515 GCCCAAAAGTGTCTGGAATGT 59.036 47.619 0.00 0.00 34.35 2.71
4928 5749 1.273327 GGCCCAAAAGTGTCTGGAATG 59.727 52.381 0.00 0.00 34.35 2.67
4929 5750 1.133199 TGGCCCAAAAGTGTCTGGAAT 60.133 47.619 0.00 0.00 34.35 3.01
4930 5751 0.260230 TGGCCCAAAAGTGTCTGGAA 59.740 50.000 0.00 0.00 34.35 3.53
4931 5752 0.482446 ATGGCCCAAAAGTGTCTGGA 59.518 50.000 0.00 0.00 34.35 3.86
4932 5753 2.214376 TATGGCCCAAAAGTGTCTGG 57.786 50.000 0.00 0.00 0.00 3.86
4933 5754 5.221303 CCATAATATGGCCCAAAAGTGTCTG 60.221 44.000 6.33 0.00 44.70 3.51
4934 5755 4.895297 CCATAATATGGCCCAAAAGTGTCT 59.105 41.667 6.33 0.00 44.70 3.41
4935 5756 5.200368 CCATAATATGGCCCAAAAGTGTC 57.800 43.478 6.33 0.00 44.70 3.67
4952 5773 7.540299 GGTCCGAACAAATTTGATAACCATAA 58.460 34.615 24.64 0.00 0.00 1.90
4953 5774 6.183360 CGGTCCGAACAAATTTGATAACCATA 60.183 38.462 24.64 0.00 0.00 2.74
4959 5780 3.677190 ACCGGTCCGAACAAATTTGATA 58.323 40.909 24.64 2.36 0.00 2.15
4961 5782 1.874872 GACCGGTCCGAACAAATTTGA 59.125 47.619 24.75 0.00 0.00 2.69
4972 5793 2.052690 AGATGTCCAGACCGGTCCG 61.053 63.158 30.82 21.26 35.57 4.79
4982 5803 3.694043 TTGTCGGATTTCAGATGTCCA 57.306 42.857 3.27 0.00 32.23 4.02
4987 5808 4.141287 TGTTGGTTTGTCGGATTTCAGAT 58.859 39.130 0.00 0.00 0.00 2.90
5020 5841 4.694509 ACATTCAAGCTGTCTCAGACATTC 59.305 41.667 8.28 3.49 41.94 2.67
5021 5842 4.649692 ACATTCAAGCTGTCTCAGACATT 58.350 39.130 8.28 0.00 41.94 2.71
5022 5843 4.252073 GACATTCAAGCTGTCTCAGACAT 58.748 43.478 8.28 0.00 41.94 3.06
5023 5844 3.555795 GGACATTCAAGCTGTCTCAGACA 60.556 47.826 7.44 7.44 42.14 3.41
5024 5845 2.999355 GGACATTCAAGCTGTCTCAGAC 59.001 50.000 0.00 0.00 42.14 3.51
5025 5846 2.353109 CGGACATTCAAGCTGTCTCAGA 60.353 50.000 3.40 0.00 42.14 3.27
5026 5847 1.998315 CGGACATTCAAGCTGTCTCAG 59.002 52.381 3.40 0.00 42.14 3.35
5027 5848 1.941209 GCGGACATTCAAGCTGTCTCA 60.941 52.381 3.40 0.00 42.14 3.27
5028 5849 0.723981 GCGGACATTCAAGCTGTCTC 59.276 55.000 3.40 0.00 42.14 3.36
5029 5850 0.674895 GGCGGACATTCAAGCTGTCT 60.675 55.000 3.40 0.00 42.14 3.41
5030 5851 0.955428 TGGCGGACATTCAAGCTGTC 60.955 55.000 0.00 0.00 41.83 3.51
5031 5852 1.073025 TGGCGGACATTCAAGCTGT 59.927 52.632 0.00 0.00 0.00 4.40
5032 5853 1.236616 TGTGGCGGACATTCAAGCTG 61.237 55.000 0.00 0.00 0.00 4.24
5033 5854 0.322816 ATGTGGCGGACATTCAAGCT 60.323 50.000 0.00 0.00 43.20 3.74
5034 5855 0.099436 GATGTGGCGGACATTCAAGC 59.901 55.000 1.84 0.00 45.90 4.01
5035 5856 0.374758 CGATGTGGCGGACATTCAAG 59.625 55.000 1.84 0.00 45.90 3.02
5036 5857 1.643868 GCGATGTGGCGGACATTCAA 61.644 55.000 1.84 0.00 45.90 2.69
5037 5858 2.106074 GCGATGTGGCGGACATTCA 61.106 57.895 1.84 0.00 45.90 2.57
5038 5859 1.766143 GAGCGATGTGGCGGACATTC 61.766 60.000 1.84 0.00 45.90 2.67
5039 5860 1.815421 GAGCGATGTGGCGGACATT 60.815 57.895 1.84 0.00 45.90 2.71
5041 5862 4.794439 CGAGCGATGTGGCGGACA 62.794 66.667 0.00 0.00 39.53 4.02
5042 5863 4.492160 TCGAGCGATGTGGCGGAC 62.492 66.667 0.00 0.00 38.18 4.79
5043 5864 4.492160 GTCGAGCGATGTGGCGGA 62.492 66.667 0.00 0.00 38.18 5.54
5044 5865 4.794439 TGTCGAGCGATGTGGCGG 62.794 66.667 0.00 0.00 38.18 6.13
5045 5866 2.379634 TTTGTCGAGCGATGTGGCG 61.380 57.895 0.00 0.00 38.18 5.69
5046 5867 1.132640 GTTTGTCGAGCGATGTGGC 59.867 57.895 0.00 0.00 0.00 5.01
5047 5868 0.948623 TGGTTTGTCGAGCGATGTGG 60.949 55.000 0.00 0.00 0.00 4.17
5048 5869 0.865111 TTGGTTTGTCGAGCGATGTG 59.135 50.000 0.00 0.00 0.00 3.21
5049 5870 0.865769 GTTGGTTTGTCGAGCGATGT 59.134 50.000 0.00 0.00 0.00 3.06
5050 5871 0.865111 TGTTGGTTTGTCGAGCGATG 59.135 50.000 0.00 0.00 0.00 3.84
5051 5872 1.464608 CATGTTGGTTTGTCGAGCGAT 59.535 47.619 0.00 0.00 0.00 4.58
5052 5873 0.865111 CATGTTGGTTTGTCGAGCGA 59.135 50.000 0.00 0.00 0.00 4.93
5053 5874 0.865111 TCATGTTGGTTTGTCGAGCG 59.135 50.000 0.00 0.00 0.00 5.03
5054 5875 3.042887 GTTTCATGTTGGTTTGTCGAGC 58.957 45.455 0.00 0.00 0.00 5.03
5055 5876 3.628017 GGTTTCATGTTGGTTTGTCGAG 58.372 45.455 0.00 0.00 0.00 4.04
5056 5877 2.032302 CGGTTTCATGTTGGTTTGTCGA 59.968 45.455 0.00 0.00 0.00 4.20
5057 5878 2.380660 CGGTTTCATGTTGGTTTGTCG 58.619 47.619 0.00 0.00 0.00 4.35
5058 5879 2.544903 CCCGGTTTCATGTTGGTTTGTC 60.545 50.000 0.00 0.00 0.00 3.18
5059 5880 1.410882 CCCGGTTTCATGTTGGTTTGT 59.589 47.619 0.00 0.00 0.00 2.83
5060 5881 1.270041 CCCCGGTTTCATGTTGGTTTG 60.270 52.381 0.00 0.00 0.00 2.93
5061 5882 1.044611 CCCCGGTTTCATGTTGGTTT 58.955 50.000 0.00 0.00 0.00 3.27
5062 5883 0.186386 TCCCCGGTTTCATGTTGGTT 59.814 50.000 0.00 0.00 0.00 3.67
5063 5884 0.186386 TTCCCCGGTTTCATGTTGGT 59.814 50.000 0.00 0.00 0.00 3.67
5064 5885 1.204467 CATTCCCCGGTTTCATGTTGG 59.796 52.381 0.00 0.00 0.00 3.77
5065 5886 1.892474 ACATTCCCCGGTTTCATGTTG 59.108 47.619 0.00 0.00 0.00 3.33
5066 5887 2.167662 GACATTCCCCGGTTTCATGTT 58.832 47.619 0.00 0.00 0.00 2.71
5067 5888 1.354368 AGACATTCCCCGGTTTCATGT 59.646 47.619 0.00 2.92 0.00 3.21
5068 5889 1.745087 CAGACATTCCCCGGTTTCATG 59.255 52.381 0.00 0.00 0.00 3.07
5069 5890 1.633432 TCAGACATTCCCCGGTTTCAT 59.367 47.619 0.00 0.00 0.00 2.57
5070 5891 1.003118 CTCAGACATTCCCCGGTTTCA 59.997 52.381 0.00 0.00 0.00 2.69
5071 5892 1.278127 TCTCAGACATTCCCCGGTTTC 59.722 52.381 0.00 0.00 0.00 2.78
5072 5893 1.003233 GTCTCAGACATTCCCCGGTTT 59.997 52.381 0.00 0.00 32.09 3.27
5073 5894 0.613777 GTCTCAGACATTCCCCGGTT 59.386 55.000 0.00 0.00 32.09 4.44
5074 5895 0.544357 TGTCTCAGACATTCCCCGGT 60.544 55.000 2.36 0.00 37.67 5.28
5075 5896 0.176680 CTGTCTCAGACATTCCCCGG 59.823 60.000 8.28 0.00 41.94 5.73
5076 5897 0.460987 GCTGTCTCAGACATTCCCCG 60.461 60.000 8.28 0.00 41.94 5.73
5077 5898 0.908198 AGCTGTCTCAGACATTCCCC 59.092 55.000 8.28 0.00 41.94 4.81
5078 5899 2.027745 TCAAGCTGTCTCAGACATTCCC 60.028 50.000 8.28 0.00 41.94 3.97
5079 5900 3.325293 TCAAGCTGTCTCAGACATTCC 57.675 47.619 8.28 0.00 41.94 3.01
5080 5901 4.437121 GCATTCAAGCTGTCTCAGACATTC 60.437 45.833 8.28 3.49 41.94 2.67
5083 5904 2.420642 GCATTCAAGCTGTCTCAGACA 58.579 47.619 7.44 7.44 40.50 3.41
5088 5909 1.986575 GCGGGCATTCAAGCTGTCTC 61.987 60.000 0.00 0.00 34.17 3.36
5089 5910 2.042831 GCGGGCATTCAAGCTGTCT 61.043 57.895 0.00 0.00 34.17 3.41
5092 5913 3.063704 TGGCGGGCATTCAAGCTG 61.064 61.111 0.00 0.00 34.17 4.24
5095 5916 1.434696 GATGTGGCGGGCATTCAAG 59.565 57.895 7.75 0.00 0.00 3.02
5115 5936 3.056328 GCCCGGGCTGTCAAAGTC 61.056 66.667 38.76 4.71 38.26 3.01
5116 5937 4.660938 GGCCCGGGCTGTCAAAGT 62.661 66.667 42.70 0.00 41.60 2.66
5117 5938 4.351054 AGGCCCGGGCTGTCAAAG 62.351 66.667 42.70 4.59 41.60 2.77
5118 5939 4.344865 GAGGCCCGGGCTGTCAAA 62.345 66.667 42.70 0.00 38.98 2.69
5129 5950 0.405973 AGAGAAGTTTTGGGAGGCCC 59.594 55.000 0.00 0.00 45.71 5.80
5130 5951 1.352687 AGAGAGAAGTTTTGGGAGGCC 59.647 52.381 0.00 0.00 0.00 5.19
5131 5952 2.705730 GAGAGAGAAGTTTTGGGAGGC 58.294 52.381 0.00 0.00 0.00 4.70
5132 5953 2.300437 ACGAGAGAGAAGTTTTGGGAGG 59.700 50.000 0.00 0.00 0.00 4.30
5133 5954 3.580731 GACGAGAGAGAAGTTTTGGGAG 58.419 50.000 0.00 0.00 0.00 4.30
5134 5955 2.030185 CGACGAGAGAGAAGTTTTGGGA 60.030 50.000 0.00 0.00 0.00 4.37
5135 5956 2.288273 ACGACGAGAGAGAAGTTTTGGG 60.288 50.000 0.00 0.00 0.00 4.12
5136 5957 3.014604 ACGACGAGAGAGAAGTTTTGG 57.985 47.619 0.00 0.00 0.00 3.28
5137 5958 4.318121 CCAAACGACGAGAGAGAAGTTTTG 60.318 45.833 0.00 0.00 30.56 2.44
5138 5959 3.802685 CCAAACGACGAGAGAGAAGTTTT 59.197 43.478 0.00 0.00 30.56 2.43
5139 5960 3.067742 TCCAAACGACGAGAGAGAAGTTT 59.932 43.478 0.00 0.00 32.82 2.66
5140 5961 2.621998 TCCAAACGACGAGAGAGAAGTT 59.378 45.455 0.00 0.00 0.00 2.66
5141 5962 2.226912 CTCCAAACGACGAGAGAGAAGT 59.773 50.000 0.00 0.00 0.00 3.01
5142 5963 2.484651 TCTCCAAACGACGAGAGAGAAG 59.515 50.000 0.00 0.00 31.85 2.85
5143 5964 2.501261 TCTCCAAACGACGAGAGAGAA 58.499 47.619 0.00 0.00 31.85 2.87
5144 5965 2.180432 TCTCCAAACGACGAGAGAGA 57.820 50.000 0.00 4.77 31.85 3.10
5145 5966 2.226912 AGTTCTCCAAACGACGAGAGAG 59.773 50.000 0.00 2.29 36.76 3.20
5146 5967 2.225963 GAGTTCTCCAAACGACGAGAGA 59.774 50.000 0.00 4.77 36.52 3.10
5147 5968 2.226912 AGAGTTCTCCAAACGACGAGAG 59.773 50.000 0.00 2.30 36.52 3.20
5148 5969 2.228059 AGAGTTCTCCAAACGACGAGA 58.772 47.619 0.00 0.00 33.31 4.04
5149 5970 2.708386 AGAGTTCTCCAAACGACGAG 57.292 50.000 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.