Multiple sequence alignment - TraesCS3B01G303400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G303400 chr3B 100.000 3914 0 0 1 3914 487541511 487537598 0.000000e+00 7228
1 TraesCS3B01G303400 chr3A 91.382 2982 178 47 538 3481 495501913 495498973 0.000000e+00 4010
2 TraesCS3B01G303400 chr3A 93.370 181 8 2 235 414 495502197 495502020 8.340000e-67 265
3 TraesCS3B01G303400 chr3A 97.561 82 2 0 1 82 495502454 495502373 1.470000e-29 141
4 TraesCS3B01G303400 chr3A 80.380 158 10 7 104 240 495502382 495502225 2.490000e-17 100
5 TraesCS3B01G303400 chr3D 92.913 2568 136 30 527 3075 373835119 373832579 0.000000e+00 3692
6 TraesCS3B01G303400 chr3D 89.453 256 17 4 3063 3308 373832564 373832309 8.160000e-82 315
7 TraesCS3B01G303400 chr3D 88.123 261 9 7 1 240 373835818 373835559 1.380000e-74 291
8 TraesCS3B01G303400 chr3D 90.610 213 14 3 235 447 373835531 373835325 1.070000e-70 278
9 TraesCS3B01G303400 chr3D 93.333 165 6 4 3754 3914 120791380 120791217 5.050000e-59 239
10 TraesCS3B01G303400 chr7B 83.390 590 70 13 2028 2612 735308272 735307706 4.480000e-144 521
11 TraesCS3B01G303400 chr7B 83.390 590 70 13 2028 2612 735806894 735807460 4.480000e-144 521
12 TraesCS3B01G303400 chr6D 95.455 154 5 2 3761 3914 139935901 139936052 1.090000e-60 244
13 TraesCS3B01G303400 chr6A 96.575 146 4 1 3769 3914 442378224 442378368 1.410000e-59 241
14 TraesCS3B01G303400 chr6A 94.231 156 6 3 3761 3914 544366436 544366590 6.540000e-58 235
15 TraesCS3B01G303400 chr4D 96.575 146 4 1 3769 3914 486560811 486560955 1.410000e-59 241
16 TraesCS3B01G303400 chr7D 95.946 148 5 1 3767 3914 531632750 531632896 5.050000e-59 239
17 TraesCS3B01G303400 chr1D 93.671 158 8 2 3757 3914 213933712 213933557 6.540000e-58 235
18 TraesCS3B01G303400 chr1D 93.082 159 9 2 3757 3914 440218852 440218695 8.460000e-57 231
19 TraesCS3B01G303400 chr1B 93.671 158 7 3 3759 3914 542706606 542706450 2.350000e-57 233


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G303400 chr3B 487537598 487541511 3913 True 7228 7228 100.00000 1 3914 1 chr3B.!!$R1 3913
1 TraesCS3B01G303400 chr3A 495498973 495502454 3481 True 1129 4010 90.67325 1 3481 4 chr3A.!!$R1 3480
2 TraesCS3B01G303400 chr3D 373832309 373835818 3509 True 1144 3692 90.27475 1 3308 4 chr3D.!!$R2 3307
3 TraesCS3B01G303400 chr7B 735307706 735308272 566 True 521 521 83.39000 2028 2612 1 chr7B.!!$R1 584
4 TraesCS3B01G303400 chr7B 735806894 735807460 566 False 521 521 83.39000 2028 2612 1 chr7B.!!$F1 584

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
595 776 0.249868 TCCAGGCACAAGTCAACGAG 60.250 55.0 0.00 0.0 0.0 4.18 F
894 1078 0.463295 ACTGCTGCTCCAATCCATCG 60.463 55.0 0.00 0.0 0.0 3.84 F
1560 1762 0.179179 GGTACTCGTGCGTACACCTC 60.179 60.0 4.09 0.0 44.4 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1482 1684 0.482446 TTCAGGGGGCTTGTTCACAT 59.518 50.0 0.0 0.0 0.00 3.21 R
2702 2914 0.670546 CAGTGTTGCCTACCACTCCG 60.671 60.0 0.0 0.0 0.00 4.63 R
3430 3693 0.039527 CGACATATCGGACGCATCCA 60.040 55.0 0.0 0.0 46.67 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.263077 CCTTCTTGAGACGTGGAATCG 58.737 52.381 0.00 0.00 0.00 3.34
164 186 1.506025 AAAACAAACCATGGTGCCCT 58.494 45.000 20.60 0.00 0.00 5.19
174 196 2.290514 CCATGGTGCCCTATACATGAGG 60.291 54.545 2.57 0.00 42.39 3.86
184 206 2.001812 ATACATGAGGATGCGCGATC 57.998 50.000 12.10 10.22 32.14 3.69
218 240 0.992802 GCCGATATTACAGCGCTAGC 59.007 55.000 10.99 4.06 45.58 3.42
261 316 1.352156 CCGTGCCTTGCGAGTACTTC 61.352 60.000 0.00 0.00 0.00 3.01
283 338 8.290325 ACTTCACCAAAATATTTCTTCGAGAAC 58.710 33.333 0.10 0.00 33.26 3.01
302 357 3.434940 ACGGGTTCTTTAGCATTTCCT 57.565 42.857 0.00 0.00 0.00 3.36
384 439 7.574030 GCTTTTTCTTCTCTCATTTCTACCACC 60.574 40.741 0.00 0.00 0.00 4.61
385 440 6.688073 TTTCTTCTCTCATTTCTACCACCT 57.312 37.500 0.00 0.00 0.00 4.00
386 441 7.792364 TTTCTTCTCTCATTTCTACCACCTA 57.208 36.000 0.00 0.00 0.00 3.08
401 456 7.093354 TCTACCACCTACTACTATTACGATCG 58.907 42.308 14.88 14.88 0.00 3.69
433 488 9.261180 CATATCTTAATTTCTGTGTCGTGGTAT 57.739 33.333 0.00 0.00 0.00 2.73
435 490 8.644318 ATCTTAATTTCTGTGTCGTGGTATAC 57.356 34.615 0.00 0.00 0.00 1.47
447 502 9.263538 TGTGTCGTGGTATACATATATTTTTCC 57.736 33.333 5.01 0.00 0.00 3.13
448 503 8.430063 GTGTCGTGGTATACATATATTTTTCCG 58.570 37.037 5.01 0.00 0.00 4.30
449 504 8.143193 TGTCGTGGTATACATATATTTTTCCGT 58.857 33.333 5.01 0.00 0.00 4.69
450 505 9.624697 GTCGTGGTATACATATATTTTTCCGTA 57.375 33.333 5.01 0.00 0.00 4.02
482 628 3.904339 ACTCTTGACCCTACATGTCAGTT 59.096 43.478 0.00 0.00 43.14 3.16
494 640 4.908736 ACATGTCAGTTCAAAGTCAAACG 58.091 39.130 0.00 0.00 0.00 3.60
498 644 6.003234 TGTCAGTTCAAAGTCAAACGAAAA 57.997 33.333 0.00 0.00 0.00 2.29
501 647 5.514914 TCAGTTCAAAGTCAAACGAAAATGC 59.485 36.000 0.00 0.00 0.00 3.56
507 653 6.363088 TCAAAGTCAAACGAAAATGCATCATC 59.637 34.615 0.00 0.13 0.00 2.92
508 654 5.633830 AGTCAAACGAAAATGCATCATCT 57.366 34.783 0.00 0.00 0.00 2.90
510 656 5.860182 AGTCAAACGAAAATGCATCATCTTG 59.140 36.000 0.00 3.85 0.00 3.02
511 657 5.630680 GTCAAACGAAAATGCATCATCTTGT 59.369 36.000 0.00 0.00 0.00 3.16
512 658 5.630264 TCAAACGAAAATGCATCATCTTGTG 59.370 36.000 0.00 0.98 0.00 3.33
513 659 5.375417 AACGAAAATGCATCATCTTGTGA 57.625 34.783 0.00 0.00 42.06 3.58
514 660 5.375417 ACGAAAATGCATCATCTTGTGAA 57.625 34.783 0.00 0.00 40.97 3.18
515 661 5.771469 ACGAAAATGCATCATCTTGTGAAA 58.229 33.333 0.00 0.00 40.97 2.69
516 662 5.860182 ACGAAAATGCATCATCTTGTGAAAG 59.140 36.000 0.00 0.00 40.97 2.62
517 663 6.088173 CGAAAATGCATCATCTTGTGAAAGA 58.912 36.000 0.00 0.00 40.97 2.52
518 664 6.583427 CGAAAATGCATCATCTTGTGAAAGAA 59.417 34.615 0.00 0.00 40.97 2.52
519 665 7.115236 CGAAAATGCATCATCTTGTGAAAGAAA 59.885 33.333 0.00 0.00 40.97 2.52
520 666 8.665643 AAAATGCATCATCTTGTGAAAGAAAA 57.334 26.923 0.00 0.00 40.97 2.29
521 667 8.665643 AAATGCATCATCTTGTGAAAGAAAAA 57.334 26.923 0.00 0.00 40.97 1.94
522 668 7.884816 ATGCATCATCTTGTGAAAGAAAAAG 57.115 32.000 0.00 0.00 40.97 2.27
523 669 6.808829 TGCATCATCTTGTGAAAGAAAAAGT 58.191 32.000 0.00 0.00 40.97 2.66
524 670 6.698329 TGCATCATCTTGTGAAAGAAAAAGTG 59.302 34.615 0.00 0.00 40.97 3.16
525 671 6.919662 GCATCATCTTGTGAAAGAAAAAGTGA 59.080 34.615 0.00 0.00 40.97 3.41
526 672 7.096312 GCATCATCTTGTGAAAGAAAAAGTGAC 60.096 37.037 0.00 0.00 40.97 3.67
528 674 5.576447 TCTTGTGAAAGAAAAAGTGACCC 57.424 39.130 0.00 0.00 0.00 4.46
529 675 5.261216 TCTTGTGAAAGAAAAAGTGACCCT 58.739 37.500 0.00 0.00 0.00 4.34
530 676 5.714806 TCTTGTGAAAGAAAAAGTGACCCTT 59.285 36.000 0.00 0.00 33.79 3.95
531 677 5.323371 TGTGAAAGAAAAAGTGACCCTTG 57.677 39.130 0.00 0.00 32.32 3.61
532 678 4.159506 TGTGAAAGAAAAAGTGACCCTTGG 59.840 41.667 0.00 0.00 32.32 3.61
534 680 3.680777 AAGAAAAAGTGACCCTTGGGA 57.319 42.857 13.39 0.00 32.32 4.37
536 682 1.961394 GAAAAAGTGACCCTTGGGACC 59.039 52.381 13.39 4.46 32.32 4.46
561 742 2.275812 GAATGCACACGTACGCGC 60.276 61.111 16.72 16.06 42.83 6.86
571 752 0.643310 ACGTACGCGCACATATGTTG 59.357 50.000 16.72 2.95 42.83 3.33
574 755 2.427169 GTACGCGCACATATGTTGTTG 58.573 47.619 5.73 0.00 36.00 3.33
593 774 0.307760 GTTCCAGGCACAAGTCAACG 59.692 55.000 0.00 0.00 0.00 4.10
595 776 0.249868 TCCAGGCACAAGTCAACGAG 60.250 55.000 0.00 0.00 0.00 4.18
596 777 1.230635 CCAGGCACAAGTCAACGAGG 61.231 60.000 0.00 0.00 0.00 4.63
619 800 8.380742 AGGACACCAAAGAGAAGAGAATAATA 57.619 34.615 0.00 0.00 0.00 0.98
620 801 8.826765 AGGACACCAAAGAGAAGAGAATAATAA 58.173 33.333 0.00 0.00 0.00 1.40
621 802 9.103861 GGACACCAAAGAGAAGAGAATAATAAG 57.896 37.037 0.00 0.00 0.00 1.73
623 804 7.554476 ACACCAAAGAGAAGAGAATAATAAGCC 59.446 37.037 0.00 0.00 0.00 4.35
624 805 7.012799 CACCAAAGAGAAGAGAATAATAAGCCC 59.987 40.741 0.00 0.00 0.00 5.19
625 806 7.092219 ACCAAAGAGAAGAGAATAATAAGCCCT 60.092 37.037 0.00 0.00 0.00 5.19
626 807 7.228308 CCAAAGAGAAGAGAATAATAAGCCCTG 59.772 40.741 0.00 0.00 0.00 4.45
627 808 6.432403 AGAGAAGAGAATAATAAGCCCTGG 57.568 41.667 0.00 0.00 0.00 4.45
629 810 6.388394 AGAGAAGAGAATAATAAGCCCTGGTT 59.612 38.462 0.00 0.00 0.00 3.67
630 811 6.974795 AGAAGAGAATAATAAGCCCTGGTTT 58.025 36.000 0.00 0.00 0.00 3.27
632 813 8.728098 AGAAGAGAATAATAAGCCCTGGTTTAT 58.272 33.333 0.00 0.00 33.91 1.40
782 966 4.139234 GGGTCGCACGTACTCCCC 62.139 72.222 5.03 1.56 32.66 4.81
783 967 3.066814 GGTCGCACGTACTCCCCT 61.067 66.667 0.00 0.00 0.00 4.79
784 968 2.643232 GGTCGCACGTACTCCCCTT 61.643 63.158 0.00 0.00 0.00 3.95
792 976 1.673808 CGTACTCCCCTTCTTCCCCG 61.674 65.000 0.00 0.00 0.00 5.73
848 1032 5.721000 TGATAAAATCAAATCCAAGCCCTGT 59.279 36.000 0.00 0.00 36.11 4.00
894 1078 0.463295 ACTGCTGCTCCAATCCATCG 60.463 55.000 0.00 0.00 0.00 3.84
926 1111 3.067106 GTTCAAGCCTCTCGTGATTGAA 58.933 45.455 9.50 9.50 37.49 2.69
931 1116 1.066858 GCCTCTCGTGATTGAACTCCA 60.067 52.381 0.00 0.00 0.00 3.86
938 1123 3.054434 TCGTGATTGAACTCCATCCCATT 60.054 43.478 0.00 0.00 0.00 3.16
1078 1263 2.119655 TCGCTCTACCTCGGCTTCC 61.120 63.158 0.00 0.00 0.00 3.46
1122 1307 1.994507 CTCCTGGGCCTTCAGCTCT 60.995 63.158 4.53 0.00 45.11 4.09
1176 1361 2.794350 CCTGCCGTTCAATTTCAACAAC 59.206 45.455 0.00 0.00 0.00 3.32
1264 1449 3.938963 GGGCGTCTGATTAAATTGACAGA 59.061 43.478 0.00 0.00 37.11 3.41
1267 1452 5.220491 GGCGTCTGATTAAATTGACAGAGAC 60.220 44.000 0.00 0.00 39.52 3.36
1274 1459 8.791327 TGATTAAATTGACAGAGACTATTGCA 57.209 30.769 0.00 0.00 0.00 4.08
1288 1473 5.815740 AGACTATTGCATTCGTAATTCCGTT 59.184 36.000 0.00 0.00 0.00 4.44
1289 1474 5.806286 ACTATTGCATTCGTAATTCCGTTG 58.194 37.500 0.00 0.00 0.00 4.10
1325 1511 9.716484 GTTTTATAATTTTGCTTCGTTTTACGG 57.284 29.630 0.00 0.00 42.81 4.02
1416 1602 0.681733 TCTGTTCTGGTGAGCAGTCC 59.318 55.000 11.78 4.16 46.93 3.85
1427 1614 3.365364 GGTGAGCAGTCCGATTCTTTTTG 60.365 47.826 0.00 0.00 0.00 2.44
1428 1615 2.226437 TGAGCAGTCCGATTCTTTTTGC 59.774 45.455 0.00 0.00 0.00 3.68
1436 1624 6.088616 CAGTCCGATTCTTTTTGCATCTTTTC 59.911 38.462 0.00 0.00 0.00 2.29
1439 1627 6.016360 TCCGATTCTTTTTGCATCTTTTCTCA 60.016 34.615 0.00 0.00 0.00 3.27
1443 1631 7.992180 TTCTTTTTGCATCTTTTCTCACTTC 57.008 32.000 0.00 0.00 0.00 3.01
1444 1632 7.099266 TCTTTTTGCATCTTTTCTCACTTCA 57.901 32.000 0.00 0.00 0.00 3.02
1445 1633 6.974622 TCTTTTTGCATCTTTTCTCACTTCAC 59.025 34.615 0.00 0.00 0.00 3.18
1446 1634 5.833406 TTTGCATCTTTTCTCACTTCACA 57.167 34.783 0.00 0.00 0.00 3.58
1447 1635 5.833406 TTGCATCTTTTCTCACTTCACAA 57.167 34.783 0.00 0.00 0.00 3.33
1449 1637 5.765176 TGCATCTTTTCTCACTTCACAATG 58.235 37.500 0.00 0.00 0.00 2.82
1467 1669 4.630940 ACAATGTTCAGTTTGGCAACTTTG 59.369 37.500 0.00 5.68 40.66 2.77
1560 1762 0.179179 GGTACTCGTGCGTACACCTC 60.179 60.000 4.09 0.00 44.40 3.85
1650 1852 2.741612 GTCTCCTTCATGCTCATCTCG 58.258 52.381 0.00 0.00 0.00 4.04
1656 1858 2.587194 ATGCTCATCTCGCACGGC 60.587 61.111 0.00 0.00 40.65 5.68
1687 1889 2.194212 TACGAGCGCCTCTCCATCC 61.194 63.158 2.29 0.00 38.62 3.51
1816 2018 5.519927 GCGATTTATTTGTTTGGGGATTCTG 59.480 40.000 0.00 0.00 0.00 3.02
1831 2033 6.174049 GGGGATTCTGTACAATTAGCTATCC 58.826 44.000 0.00 0.00 0.00 2.59
2035 2238 6.795114 CCAAGTACACAATGTTTAAGTAAGCG 59.205 38.462 0.00 0.00 0.00 4.68
2059 2262 4.389077 GTCCTTATTCCTGACGAACACTTG 59.611 45.833 0.00 0.00 31.79 3.16
2069 2272 5.493133 TGACGAACACTTGCAGTATTTTT 57.507 34.783 0.00 0.00 0.00 1.94
2217 2428 4.212425 TGCACACAGTTTTCTTATGGTACG 59.788 41.667 0.00 0.00 0.00 3.67
2224 2435 7.330946 CACAGTTTTCTTATGGTACGATCAGAA 59.669 37.037 9.63 9.63 0.00 3.02
2235 2446 6.703319 TGGTACGATCAGAAATTGGTAAGAA 58.297 36.000 0.00 0.00 0.00 2.52
2257 2468 4.449131 AGATGCATACTGAACTGTGATGG 58.551 43.478 0.00 0.00 0.00 3.51
2453 2665 7.599621 TGAAATGTGACATGAATTCCAAATGTC 59.400 33.333 21.80 21.80 46.73 3.06
2532 2744 2.957402 AGTCAAACTGGGAGATTGCA 57.043 45.000 0.00 0.00 29.36 4.08
2573 2785 2.835764 TGGTATGGTCACCTAACCTCAC 59.164 50.000 16.51 0.00 40.20 3.51
2601 2813 9.283768 TCATTTCTTTAGCATCTTGTGTTCTTA 57.716 29.630 0.00 0.00 0.00 2.10
2607 2819 4.910195 AGCATCTTGTGTTCTTATGGTCA 58.090 39.130 0.00 0.00 0.00 4.02
2612 2824 6.861065 TCTTGTGTTCTTATGGTCAGAAAC 57.139 37.500 0.00 0.00 31.98 2.78
2660 2872 4.253685 CTGTAACGACACAGGAAATGGAT 58.746 43.478 11.68 0.00 41.88 3.41
2678 2890 0.465097 ATGCAGCCGATTTCAGAGGG 60.465 55.000 0.00 0.00 0.00 4.30
2702 2914 0.107703 TCTCGGACCAATGGCATGTC 60.108 55.000 0.00 4.98 0.00 3.06
2792 3016 5.132897 TGTTGCATTTGAATCTAACACCC 57.867 39.130 0.00 0.00 0.00 4.61
2811 3035 0.817654 CGGTGATACTGCAGAGGACA 59.182 55.000 23.35 11.71 0.00 4.02
2923 3147 3.142174 GGTTTCAGTTGAAGGAGGACAG 58.858 50.000 0.00 0.00 35.21 3.51
2935 3159 1.208293 GGAGGACAGACCAGGTTCATC 59.792 57.143 0.00 0.00 42.04 2.92
2967 3191 3.006217 CGGGAGATGCAGAAGATGACATA 59.994 47.826 0.00 0.00 0.00 2.29
2969 3193 4.563168 GGGAGATGCAGAAGATGACATAGG 60.563 50.000 0.00 0.00 0.00 2.57
3001 3225 4.848685 CGGAAACCGGTGATAGGG 57.151 61.111 8.52 0.00 44.15 3.53
3032 3256 5.183904 GGTTGCAACAGAGAAATATTGGACT 59.816 40.000 29.55 0.00 0.00 3.85
3051 3275 1.005037 CCACGGTGCAGTAGCTTCA 60.005 57.895 1.68 0.00 42.74 3.02
3179 3435 3.069016 TCGTTCTTCTCCAAGTACAGCAA 59.931 43.478 0.00 0.00 31.06 3.91
3216 3472 5.625311 GTGAAAGACACGATCCAAAATGAAC 59.375 40.000 0.00 0.00 39.78 3.18
3218 3474 2.742053 AGACACGATCCAAAATGAACGG 59.258 45.455 0.00 0.00 35.17 4.44
3219 3475 1.199097 ACACGATCCAAAATGAACGGC 59.801 47.619 0.00 0.00 35.17 5.68
3236 3492 4.110036 ACGGCTAGCAATTCCATTTTTC 57.890 40.909 18.24 0.00 0.00 2.29
3237 3493 3.509575 ACGGCTAGCAATTCCATTTTTCA 59.490 39.130 18.24 0.00 0.00 2.69
3238 3494 4.160252 ACGGCTAGCAATTCCATTTTTCAT 59.840 37.500 18.24 0.00 0.00 2.57
3239 3495 4.741676 CGGCTAGCAATTCCATTTTTCATC 59.258 41.667 18.24 0.00 0.00 2.92
3240 3496 5.052481 GGCTAGCAATTCCATTTTTCATCC 58.948 41.667 18.24 0.00 0.00 3.51
3245 3507 4.183101 CAATTCCATTTTTCATCCGGTGG 58.817 43.478 0.00 0.00 0.00 4.61
3246 3508 2.595750 TCCATTTTTCATCCGGTGGT 57.404 45.000 0.00 0.00 0.00 4.16
3247 3509 2.166829 TCCATTTTTCATCCGGTGGTG 58.833 47.619 0.00 0.00 0.00 4.17
3249 3511 2.352617 CCATTTTTCATCCGGTGGTGTG 60.353 50.000 0.00 0.00 0.00 3.82
3252 3514 0.251121 TTTCATCCGGTGGTGTGCAT 60.251 50.000 0.00 0.00 0.00 3.96
3325 3588 2.203280 CCAACCACTGCCGGACAA 60.203 61.111 5.05 0.00 0.00 3.18
3350 3613 1.142870 CTTTCACCACCCAAGACCTGA 59.857 52.381 0.00 0.00 0.00 3.86
3360 3623 2.158755 CCCAAGACCTGACAAACTCAGT 60.159 50.000 0.00 0.00 44.69 3.41
3366 3629 3.279434 ACCTGACAAACTCAGTCCAAAC 58.721 45.455 0.00 0.00 44.69 2.93
3426 3689 1.145571 TGTGGGTTGGATATAGGGGC 58.854 55.000 0.00 0.00 0.00 5.80
3428 3691 0.400815 TGGGTTGGATATAGGGGCGT 60.401 55.000 0.00 0.00 0.00 5.68
3429 3692 0.323957 GGGTTGGATATAGGGGCGTC 59.676 60.000 0.00 0.00 0.00 5.19
3430 3693 1.349067 GGTTGGATATAGGGGCGTCT 58.651 55.000 0.00 0.00 0.00 4.18
3481 3744 2.357952 GCCGGACCTATTTCAAATCCAC 59.642 50.000 5.05 0.00 0.00 4.02
3482 3745 3.886123 CCGGACCTATTTCAAATCCACT 58.114 45.455 0.00 0.00 0.00 4.00
3483 3746 4.270008 CCGGACCTATTTCAAATCCACTT 58.730 43.478 0.00 0.00 0.00 3.16
3484 3747 4.335594 CCGGACCTATTTCAAATCCACTTC 59.664 45.833 0.00 0.00 0.00 3.01
3485 3748 4.941263 CGGACCTATTTCAAATCCACTTCA 59.059 41.667 0.00 0.00 0.00 3.02
3486 3749 5.414454 CGGACCTATTTCAAATCCACTTCAA 59.586 40.000 0.00 0.00 0.00 2.69
3487 3750 6.072175 CGGACCTATTTCAAATCCACTTCAAA 60.072 38.462 0.00 0.00 0.00 2.69
3488 3751 7.362920 CGGACCTATTTCAAATCCACTTCAAAT 60.363 37.037 0.00 0.00 0.00 2.32
3489 3752 8.314021 GGACCTATTTCAAATCCACTTCAAATT 58.686 33.333 0.00 0.00 0.00 1.82
3490 3753 9.143631 GACCTATTTCAAATCCACTTCAAATTG 57.856 33.333 0.00 0.00 0.00 2.32
3491 3754 8.869109 ACCTATTTCAAATCCACTTCAAATTGA 58.131 29.630 0.00 0.00 0.00 2.57
3492 3755 9.143631 CCTATTTCAAATCCACTTCAAATTGAC 57.856 33.333 0.00 0.00 0.00 3.18
3493 3756 9.918630 CTATTTCAAATCCACTTCAAATTGACT 57.081 29.630 0.00 0.00 0.00 3.41
3494 3757 8.597662 ATTTCAAATCCACTTCAAATTGACTG 57.402 30.769 0.00 0.00 0.00 3.51
3495 3758 6.088016 TCAAATCCACTTCAAATTGACTGG 57.912 37.500 11.05 11.05 0.00 4.00
3496 3759 5.598005 TCAAATCCACTTCAAATTGACTGGT 59.402 36.000 15.02 4.77 30.19 4.00
3497 3760 5.712152 AATCCACTTCAAATTGACTGGTC 57.288 39.130 15.02 0.00 30.19 4.02
3498 3761 3.486383 TCCACTTCAAATTGACTGGTCC 58.514 45.455 15.02 0.00 30.19 4.46
3499 3762 3.117701 TCCACTTCAAATTGACTGGTCCA 60.118 43.478 15.02 0.00 30.19 4.02
3500 3763 3.828451 CCACTTCAAATTGACTGGTCCAT 59.172 43.478 9.64 0.00 0.00 3.41
3501 3764 4.082571 CCACTTCAAATTGACTGGTCCATC 60.083 45.833 9.64 0.00 0.00 3.51
3502 3765 4.520111 CACTTCAAATTGACTGGTCCATCA 59.480 41.667 0.00 0.00 0.00 3.07
3503 3766 5.009911 CACTTCAAATTGACTGGTCCATCAA 59.990 40.000 14.98 14.98 39.09 2.57
3504 3767 5.598005 ACTTCAAATTGACTGGTCCATCAAA 59.402 36.000 16.01 2.83 38.29 2.69
3505 3768 6.268387 ACTTCAAATTGACTGGTCCATCAAAT 59.732 34.615 16.01 8.79 38.29 2.32
3506 3769 6.669125 TCAAATTGACTGGTCCATCAAATT 57.331 33.333 16.01 12.74 38.29 1.82
3507 3770 6.457355 TCAAATTGACTGGTCCATCAAATTG 58.543 36.000 22.90 22.90 42.89 2.32
3508 3771 6.267242 TCAAATTGACTGGTCCATCAAATTGA 59.733 34.615 25.02 25.02 45.63 2.57
3509 3772 5.909621 ATTGACTGGTCCATCAAATTGAG 57.090 39.130 16.01 0.00 38.29 3.02
3510 3773 3.084039 TGACTGGTCCATCAAATTGAGC 58.916 45.455 1.10 0.00 0.00 4.26
3511 3774 2.086869 ACTGGTCCATCAAATTGAGCG 58.913 47.619 1.10 0.00 0.00 5.03
3512 3775 0.810648 TGGTCCATCAAATTGAGCGC 59.189 50.000 0.00 0.00 0.00 5.92
3513 3776 0.810648 GGTCCATCAAATTGAGCGCA 59.189 50.000 11.47 0.00 0.00 6.09
3514 3777 1.468054 GGTCCATCAAATTGAGCGCAC 60.468 52.381 11.47 3.13 0.00 5.34
3515 3778 1.470098 GTCCATCAAATTGAGCGCACT 59.530 47.619 11.47 0.00 0.00 4.40
3516 3779 1.739466 TCCATCAAATTGAGCGCACTC 59.261 47.619 11.47 0.00 43.76 3.51
3517 3780 1.202222 CCATCAAATTGAGCGCACTCC 60.202 52.381 11.47 0.00 42.74 3.85
3518 3781 1.741706 CATCAAATTGAGCGCACTCCT 59.258 47.619 11.47 0.00 42.74 3.69
3519 3782 1.442769 TCAAATTGAGCGCACTCCTC 58.557 50.000 11.47 0.00 42.74 3.71
3520 3783 0.449388 CAAATTGAGCGCACTCCTCC 59.551 55.000 11.47 0.00 42.74 4.30
3521 3784 0.678048 AAATTGAGCGCACTCCTCCC 60.678 55.000 11.47 0.00 42.74 4.30
3522 3785 2.859273 AATTGAGCGCACTCCTCCCG 62.859 60.000 11.47 0.00 42.74 5.14
3524 3787 4.803426 GAGCGCACTCCTCCCGTG 62.803 72.222 11.47 0.00 36.90 4.94
3527 3790 4.436998 CGCACTCCTCCCGTGTCC 62.437 72.222 0.00 0.00 34.91 4.02
3528 3791 3.311110 GCACTCCTCCCGTGTCCA 61.311 66.667 0.00 0.00 34.91 4.02
3529 3792 2.660064 GCACTCCTCCCGTGTCCAT 61.660 63.158 0.00 0.00 34.91 3.41
3530 3793 1.219124 CACTCCTCCCGTGTCCATG 59.781 63.158 0.00 0.00 0.00 3.66
3531 3794 2.187946 CTCCTCCCGTGTCCATGC 59.812 66.667 0.00 0.00 0.00 4.06
3532 3795 3.391665 CTCCTCCCGTGTCCATGCC 62.392 68.421 0.00 0.00 0.00 4.40
3533 3796 4.838152 CCTCCCGTGTCCATGCCG 62.838 72.222 0.00 0.00 0.00 5.69
3551 3814 3.902112 CCACCCACCTGCACCCTT 61.902 66.667 0.00 0.00 0.00 3.95
3552 3815 2.598394 CACCCACCTGCACCCTTG 60.598 66.667 0.00 0.00 0.00 3.61
3561 3824 2.033602 GCACCCTTGCTACCCGTT 59.966 61.111 0.00 0.00 46.17 4.44
3562 3825 2.038837 GCACCCTTGCTACCCGTTC 61.039 63.158 0.00 0.00 46.17 3.95
3563 3826 1.740296 CACCCTTGCTACCCGTTCG 60.740 63.158 0.00 0.00 0.00 3.95
3564 3827 2.818274 CCCTTGCTACCCGTTCGC 60.818 66.667 0.00 0.00 0.00 4.70
3565 3828 3.186047 CCTTGCTACCCGTTCGCG 61.186 66.667 0.00 0.00 40.93 5.87
3566 3829 3.849953 CTTGCTACCCGTTCGCGC 61.850 66.667 0.00 0.00 39.70 6.86
3567 3830 4.367023 TTGCTACCCGTTCGCGCT 62.367 61.111 5.56 0.00 39.70 5.92
3589 3852 2.747460 CCCTCGTCCACCGTCGTA 60.747 66.667 0.00 0.00 37.94 3.43
3590 3853 2.758089 CCCTCGTCCACCGTCGTAG 61.758 68.421 0.00 0.00 37.94 3.51
3591 3854 1.742880 CCTCGTCCACCGTCGTAGA 60.743 63.158 0.00 0.00 37.94 2.59
3592 3855 1.094073 CCTCGTCCACCGTCGTAGAT 61.094 60.000 0.00 0.00 40.67 1.98
3593 3856 0.027716 CTCGTCCACCGTCGTAGATG 59.972 60.000 0.00 0.00 44.47 2.90
3594 3857 0.674581 TCGTCCACCGTCGTAGATGT 60.675 55.000 0.00 0.00 43.09 3.06
3595 3858 0.169672 CGTCCACCGTCGTAGATGTT 59.830 55.000 0.00 0.00 43.09 2.71
3596 3859 1.625616 GTCCACCGTCGTAGATGTTG 58.374 55.000 0.00 0.00 43.09 3.33
3597 3860 1.068055 GTCCACCGTCGTAGATGTTGT 60.068 52.381 0.00 0.00 43.09 3.32
3598 3861 1.614903 TCCACCGTCGTAGATGTTGTT 59.385 47.619 0.00 0.00 43.09 2.83
3599 3862 1.724623 CCACCGTCGTAGATGTTGTTG 59.275 52.381 0.00 0.00 43.09 3.33
3600 3863 2.400399 CACCGTCGTAGATGTTGTTGT 58.600 47.619 0.00 0.00 43.09 3.32
3601 3864 2.407361 CACCGTCGTAGATGTTGTTGTC 59.593 50.000 0.00 0.00 43.09 3.18
3602 3865 1.647213 CCGTCGTAGATGTTGTTGTCG 59.353 52.381 0.00 0.00 43.09 4.35
3603 3866 2.577450 CGTCGTAGATGTTGTTGTCGA 58.423 47.619 0.00 0.00 40.67 4.20
3604 3867 2.337644 CGTCGTAGATGTTGTTGTCGAC 59.662 50.000 9.11 9.11 40.67 4.20
3605 3868 3.562505 GTCGTAGATGTTGTTGTCGACT 58.437 45.455 17.92 0.00 41.48 4.18
3606 3869 4.667415 CGTCGTAGATGTTGTTGTCGACTA 60.667 45.833 17.92 6.32 42.17 2.59
3607 3870 4.552660 GTCGTAGATGTTGTTGTCGACTAC 59.447 45.833 21.04 21.04 41.48 2.73
3608 3871 3.850273 CGTAGATGTTGTTGTCGACTACC 59.150 47.826 24.00 12.30 33.75 3.18
3609 3872 4.379186 CGTAGATGTTGTTGTCGACTACCT 60.379 45.833 24.00 16.31 33.75 3.08
3610 3873 4.602340 AGATGTTGTTGTCGACTACCTT 57.398 40.909 24.00 10.17 33.75 3.50
3611 3874 5.717078 AGATGTTGTTGTCGACTACCTTA 57.283 39.130 24.00 12.23 33.75 2.69
3612 3875 6.282199 AGATGTTGTTGTCGACTACCTTAT 57.718 37.500 24.00 15.74 33.75 1.73
3613 3876 6.331061 AGATGTTGTTGTCGACTACCTTATC 58.669 40.000 24.00 21.34 33.75 1.75
3614 3877 4.813027 TGTTGTTGTCGACTACCTTATCC 58.187 43.478 24.00 8.60 33.75 2.59
3615 3878 3.770263 TGTTGTCGACTACCTTATCCG 57.230 47.619 24.00 0.00 0.00 4.18
3616 3879 2.159338 TGTTGTCGACTACCTTATCCGC 60.159 50.000 24.00 0.31 0.00 5.54
3617 3880 1.027357 TGTCGACTACCTTATCCGCC 58.973 55.000 17.92 0.00 0.00 6.13
3618 3881 1.027357 GTCGACTACCTTATCCGCCA 58.973 55.000 8.70 0.00 0.00 5.69
3619 3882 1.027357 TCGACTACCTTATCCGCCAC 58.973 55.000 0.00 0.00 0.00 5.01
3620 3883 0.031721 CGACTACCTTATCCGCCACC 59.968 60.000 0.00 0.00 0.00 4.61
3621 3884 0.031721 GACTACCTTATCCGCCACCG 59.968 60.000 0.00 0.00 0.00 4.94
3633 3896 4.900704 CCACCGGGGGCATGGATG 62.901 72.222 11.58 0.00 35.33 3.51
3634 3897 3.807839 CACCGGGGGCATGGATGA 61.808 66.667 6.32 0.00 0.00 2.92
3635 3898 2.778278 ACCGGGGGCATGGATGAT 60.778 61.111 6.32 0.00 0.00 2.45
3636 3899 2.282674 CCGGGGGCATGGATGATG 60.283 66.667 0.00 0.00 34.84 3.07
3643 3906 3.773370 CATGGATGATGCCTGGGC 58.227 61.111 4.43 4.43 42.35 5.36
3644 3907 2.114625 ATGGATGATGCCTGGGCG 59.885 61.111 7.14 0.00 45.51 6.13
3645 3908 3.502621 ATGGATGATGCCTGGGCGG 62.503 63.158 7.14 0.00 45.51 6.13
3646 3909 3.877450 GGATGATGCCTGGGCGGA 61.877 66.667 7.14 0.00 45.51 5.54
3647 3910 2.192979 GATGATGCCTGGGCGGAA 59.807 61.111 7.14 0.00 45.51 4.30
3648 3911 1.228367 GATGATGCCTGGGCGGAAT 60.228 57.895 7.14 0.22 45.51 3.01
3649 3912 1.228367 ATGATGCCTGGGCGGAATC 60.228 57.895 7.14 5.46 46.81 2.52
3650 3913 2.595754 GATGCCTGGGCGGAATCC 60.596 66.667 7.14 0.00 41.49 3.01
3665 3928 2.365105 TCCGTGGGGATCCTGGAC 60.365 66.667 12.58 5.06 37.43 4.02
3666 3929 2.365635 CCGTGGGGATCCTGGACT 60.366 66.667 12.58 0.00 33.06 3.85
3667 3930 2.735772 CCGTGGGGATCCTGGACTG 61.736 68.421 12.58 0.00 33.06 3.51
3668 3931 1.990060 CGTGGGGATCCTGGACTGT 60.990 63.158 12.58 0.00 0.00 3.55
3669 3932 1.604378 GTGGGGATCCTGGACTGTG 59.396 63.158 12.58 0.00 0.00 3.66
3670 3933 1.616327 TGGGGATCCTGGACTGTGG 60.616 63.158 12.58 0.00 0.00 4.17
3671 3934 1.616628 GGGGATCCTGGACTGTGGT 60.617 63.158 12.58 0.00 0.00 4.16
3672 3935 1.208165 GGGGATCCTGGACTGTGGTT 61.208 60.000 12.58 0.00 0.00 3.67
3673 3936 0.035056 GGGATCCTGGACTGTGGTTG 60.035 60.000 12.58 0.00 0.00 3.77
3674 3937 0.678048 GGATCCTGGACTGTGGTTGC 60.678 60.000 3.84 0.00 0.00 4.17
3675 3938 0.678048 GATCCTGGACTGTGGTTGCC 60.678 60.000 0.00 0.00 0.00 4.52
3676 3939 1.426251 ATCCTGGACTGTGGTTGCCA 61.426 55.000 0.00 0.00 0.00 4.92
3677 3940 1.601759 CCTGGACTGTGGTTGCCAG 60.602 63.158 0.00 0.00 45.81 4.85
3678 3941 1.149174 CTGGACTGTGGTTGCCAGT 59.851 57.895 0.00 0.00 45.52 4.00
3679 3942 0.466189 CTGGACTGTGGTTGCCAGTT 60.466 55.000 0.00 0.00 43.00 3.16
3680 3943 0.751277 TGGACTGTGGTTGCCAGTTG 60.751 55.000 0.00 0.00 43.00 3.16
3681 3944 1.360192 GACTGTGGTTGCCAGTTGC 59.640 57.895 0.00 0.00 43.00 4.17
3690 3953 2.256461 GCCAGTTGCAAGGCGAAG 59.744 61.111 13.36 0.00 41.70 3.79
3691 3954 2.260869 GCCAGTTGCAAGGCGAAGA 61.261 57.895 13.36 0.00 41.70 2.87
3692 3955 1.795170 GCCAGTTGCAAGGCGAAGAA 61.795 55.000 13.36 0.00 41.70 2.52
3693 3956 0.883833 CCAGTTGCAAGGCGAAGAAT 59.116 50.000 0.00 0.00 0.00 2.40
3694 3957 1.401931 CCAGTTGCAAGGCGAAGAATG 60.402 52.381 0.00 0.00 0.00 2.67
3695 3958 1.267806 CAGTTGCAAGGCGAAGAATGT 59.732 47.619 0.00 0.00 0.00 2.71
3696 3959 1.537202 AGTTGCAAGGCGAAGAATGTC 59.463 47.619 0.00 0.00 0.00 3.06
3697 3960 0.516877 TTGCAAGGCGAAGAATGTCG 59.483 50.000 0.00 0.00 43.98 4.35
3705 3968 1.002366 CGAAGAATGTCGCCAGAAGG 58.998 55.000 0.00 0.00 33.66 3.46
3706 3969 1.373570 GAAGAATGTCGCCAGAAGGG 58.626 55.000 0.00 0.00 40.85 3.95
3707 3970 0.984230 AAGAATGTCGCCAGAAGGGA 59.016 50.000 0.00 0.00 40.01 4.20
3708 3971 0.539051 AGAATGTCGCCAGAAGGGAG 59.461 55.000 0.00 0.00 40.01 4.30
3709 3972 1.078143 AATGTCGCCAGAAGGGAGC 60.078 57.895 0.00 0.00 40.01 4.70
3715 3978 3.458163 CCAGAAGGGAGCGCCGTA 61.458 66.667 2.29 0.00 40.01 4.02
3716 3979 2.105128 CAGAAGGGAGCGCCGTAG 59.895 66.667 2.29 0.00 33.83 3.51
3729 3992 4.591852 CGTAGGAAGCTACGCGAG 57.408 61.111 15.93 7.21 44.54 5.03
3741 4004 2.944075 ACGCGAGTGAGAAGGTAGT 58.056 52.632 15.93 0.00 46.97 2.73
3742 4005 1.245732 ACGCGAGTGAGAAGGTAGTT 58.754 50.000 15.93 0.00 46.97 2.24
3743 4006 1.068472 ACGCGAGTGAGAAGGTAGTTG 60.068 52.381 15.93 0.00 46.97 3.16
3744 4007 1.351153 GCGAGTGAGAAGGTAGTTGC 58.649 55.000 0.00 0.00 0.00 4.17
3745 4008 1.336887 GCGAGTGAGAAGGTAGTTGCA 60.337 52.381 0.00 0.00 0.00 4.08
3746 4009 2.600731 CGAGTGAGAAGGTAGTTGCAG 58.399 52.381 0.00 0.00 0.00 4.41
3747 4010 2.229062 CGAGTGAGAAGGTAGTTGCAGA 59.771 50.000 0.00 0.00 0.00 4.26
3748 4011 3.671971 CGAGTGAGAAGGTAGTTGCAGAG 60.672 52.174 0.00 0.00 0.00 3.35
3749 4012 3.501349 AGTGAGAAGGTAGTTGCAGAGA 58.499 45.455 0.00 0.00 0.00 3.10
3750 4013 3.509575 AGTGAGAAGGTAGTTGCAGAGAG 59.490 47.826 0.00 0.00 0.00 3.20
3751 4014 3.508012 GTGAGAAGGTAGTTGCAGAGAGA 59.492 47.826 0.00 0.00 0.00 3.10
3752 4015 4.159506 GTGAGAAGGTAGTTGCAGAGAGAT 59.840 45.833 0.00 0.00 0.00 2.75
3753 4016 4.400884 TGAGAAGGTAGTTGCAGAGAGATC 59.599 45.833 0.00 0.00 0.00 2.75
3754 4017 3.380004 AGAAGGTAGTTGCAGAGAGATCG 59.620 47.826 0.00 0.00 0.00 3.69
3755 4018 2.028130 AGGTAGTTGCAGAGAGATCGG 58.972 52.381 0.00 0.00 0.00 4.18
3756 4019 1.751924 GGTAGTTGCAGAGAGATCGGT 59.248 52.381 0.00 0.00 0.00 4.69
3757 4020 2.480416 GGTAGTTGCAGAGAGATCGGTG 60.480 54.545 0.00 0.00 0.00 4.94
3758 4021 0.108424 AGTTGCAGAGAGATCGGTGC 60.108 55.000 5.10 5.10 36.42 5.01
3759 4022 1.153765 TTGCAGAGAGATCGGTGCG 60.154 57.895 7.00 0.00 38.84 5.34
3760 4023 2.279120 GCAGAGAGATCGGTGCGG 60.279 66.667 0.00 0.00 0.00 5.69
3761 4024 2.775856 GCAGAGAGATCGGTGCGGA 61.776 63.158 0.00 0.00 0.00 5.54
3762 4025 1.358402 CAGAGAGATCGGTGCGGAG 59.642 63.158 0.00 0.00 0.00 4.63
3763 4026 1.098129 CAGAGAGATCGGTGCGGAGA 61.098 60.000 0.00 0.00 0.00 3.71
3764 4027 0.179004 AGAGAGATCGGTGCGGAGAT 60.179 55.000 0.00 0.00 0.00 2.75
3765 4028 0.039617 GAGAGATCGGTGCGGAGATG 60.040 60.000 0.00 0.00 0.00 2.90
3766 4029 1.006805 GAGATCGGTGCGGAGATGG 60.007 63.158 0.00 0.00 0.00 3.51
3767 4030 2.663188 GATCGGTGCGGAGATGGC 60.663 66.667 0.00 0.00 0.00 4.40
3768 4031 3.157217 GATCGGTGCGGAGATGGCT 62.157 63.158 0.00 0.00 0.00 4.75
3769 4032 3.451556 ATCGGTGCGGAGATGGCTG 62.452 63.158 0.00 0.00 0.00 4.85
3771 4034 4.101448 GGTGCGGAGATGGCTGGT 62.101 66.667 0.00 0.00 0.00 4.00
3772 4035 2.821366 GTGCGGAGATGGCTGGTG 60.821 66.667 0.00 0.00 0.00 4.17
3773 4036 3.002583 TGCGGAGATGGCTGGTGA 61.003 61.111 0.00 0.00 0.00 4.02
3774 4037 2.369633 TGCGGAGATGGCTGGTGAT 61.370 57.895 0.00 0.00 0.00 3.06
3775 4038 1.890979 GCGGAGATGGCTGGTGATG 60.891 63.158 0.00 0.00 0.00 3.07
3776 4039 1.825341 CGGAGATGGCTGGTGATGA 59.175 57.895 0.00 0.00 0.00 2.92
3777 4040 0.249784 CGGAGATGGCTGGTGATGAG 60.250 60.000 0.00 0.00 0.00 2.90
3778 4041 0.835941 GGAGATGGCTGGTGATGAGT 59.164 55.000 0.00 0.00 0.00 3.41
3779 4042 1.474677 GGAGATGGCTGGTGATGAGTG 60.475 57.143 0.00 0.00 0.00 3.51
3780 4043 1.209019 GAGATGGCTGGTGATGAGTGT 59.791 52.381 0.00 0.00 0.00 3.55
3781 4044 1.632409 AGATGGCTGGTGATGAGTGTT 59.368 47.619 0.00 0.00 0.00 3.32
3782 4045 1.741706 GATGGCTGGTGATGAGTGTTG 59.258 52.381 0.00 0.00 0.00 3.33
3783 4046 0.250858 TGGCTGGTGATGAGTGTTGG 60.251 55.000 0.00 0.00 0.00 3.77
3784 4047 0.962356 GGCTGGTGATGAGTGTTGGG 60.962 60.000 0.00 0.00 0.00 4.12
3785 4048 0.962356 GCTGGTGATGAGTGTTGGGG 60.962 60.000 0.00 0.00 0.00 4.96
3786 4049 0.692476 CTGGTGATGAGTGTTGGGGA 59.308 55.000 0.00 0.00 0.00 4.81
3787 4050 1.073763 CTGGTGATGAGTGTTGGGGAA 59.926 52.381 0.00 0.00 0.00 3.97
3788 4051 1.202879 TGGTGATGAGTGTTGGGGAAC 60.203 52.381 0.00 0.00 0.00 3.62
3789 4052 1.156736 GTGATGAGTGTTGGGGAACG 58.843 55.000 0.00 0.00 0.00 3.95
3790 4053 0.762418 TGATGAGTGTTGGGGAACGT 59.238 50.000 0.00 0.00 0.00 3.99
3791 4054 1.972075 TGATGAGTGTTGGGGAACGTA 59.028 47.619 0.00 0.00 0.00 3.57
3792 4055 2.369203 TGATGAGTGTTGGGGAACGTAA 59.631 45.455 0.00 0.00 0.00 3.18
3793 4056 3.008594 TGATGAGTGTTGGGGAACGTAAT 59.991 43.478 0.00 0.00 0.00 1.89
3794 4057 4.223255 TGATGAGTGTTGGGGAACGTAATA 59.777 41.667 0.00 0.00 0.00 0.98
3795 4058 4.620589 TGAGTGTTGGGGAACGTAATAA 57.379 40.909 0.00 0.00 0.00 1.40
3796 4059 5.168647 TGAGTGTTGGGGAACGTAATAAT 57.831 39.130 0.00 0.00 0.00 1.28
3797 4060 5.562635 TGAGTGTTGGGGAACGTAATAATT 58.437 37.500 0.00 0.00 0.00 1.40
3798 4061 6.005198 TGAGTGTTGGGGAACGTAATAATTT 58.995 36.000 0.00 0.00 0.00 1.82
3799 4062 6.149807 TGAGTGTTGGGGAACGTAATAATTTC 59.850 38.462 0.00 0.00 0.00 2.17
3800 4063 6.005198 AGTGTTGGGGAACGTAATAATTTCA 58.995 36.000 0.00 0.00 0.00 2.69
3801 4064 6.490721 AGTGTTGGGGAACGTAATAATTTCAA 59.509 34.615 0.00 0.00 0.00 2.69
3802 4065 7.014422 AGTGTTGGGGAACGTAATAATTTCAAA 59.986 33.333 0.00 0.00 0.00 2.69
3803 4066 7.652507 GTGTTGGGGAACGTAATAATTTCAAAA 59.347 33.333 0.00 0.00 0.00 2.44
3804 4067 8.202137 TGTTGGGGAACGTAATAATTTCAAAAA 58.798 29.630 0.00 0.00 0.00 1.94
3822 4085 2.325509 AAAAATTCCTACGCACACGC 57.674 45.000 0.00 0.00 45.53 5.34
3823 4086 1.231221 AAAATTCCTACGCACACGCA 58.769 45.000 0.00 0.00 45.53 5.24
3824 4087 1.231221 AAATTCCTACGCACACGCAA 58.769 45.000 0.00 0.00 45.53 4.85
3825 4088 0.796312 AATTCCTACGCACACGCAAG 59.204 50.000 0.00 0.00 45.53 4.01
3826 4089 0.037697 ATTCCTACGCACACGCAAGA 60.038 50.000 0.00 0.00 45.53 3.02
3827 4090 0.037697 TTCCTACGCACACGCAAGAT 60.038 50.000 0.00 0.00 45.53 2.40
3828 4091 0.457853 TCCTACGCACACGCAAGATC 60.458 55.000 0.00 0.00 45.53 2.75
3829 4092 0.735978 CCTACGCACACGCAAGATCA 60.736 55.000 0.00 0.00 45.53 2.92
3830 4093 1.280982 CTACGCACACGCAAGATCAT 58.719 50.000 0.00 0.00 45.53 2.45
3831 4094 0.998669 TACGCACACGCAAGATCATG 59.001 50.000 0.00 0.00 45.53 3.07
3832 4095 1.061411 CGCACACGCAAGATCATGG 59.939 57.895 0.00 0.00 43.62 3.66
3833 4096 1.638388 CGCACACGCAAGATCATGGT 61.638 55.000 0.00 0.00 43.62 3.55
3834 4097 0.179181 GCACACGCAAGATCATGGTG 60.179 55.000 14.17 14.17 43.62 4.17
3835 4098 1.441738 CACACGCAAGATCATGGTGA 58.558 50.000 19.56 0.00 43.62 4.02
3836 4099 2.011947 CACACGCAAGATCATGGTGAT 58.988 47.619 19.56 0.00 40.34 3.06
3837 4100 2.011947 ACACGCAAGATCATGGTGATG 58.988 47.619 19.56 8.58 37.20 3.07
3838 4101 1.019673 ACGCAAGATCATGGTGATGC 58.980 50.000 0.00 3.06 37.20 3.91
3839 4102 1.018910 CGCAAGATCATGGTGATGCA 58.981 50.000 11.83 0.00 37.20 3.96
3840 4103 1.607148 CGCAAGATCATGGTGATGCAT 59.393 47.619 0.00 0.00 37.20 3.96
3841 4104 2.809696 CGCAAGATCATGGTGATGCATA 59.190 45.455 0.00 0.00 37.20 3.14
3842 4105 3.120304 CGCAAGATCATGGTGATGCATAG 60.120 47.826 0.00 0.00 37.20 2.23
3843 4106 3.366070 GCAAGATCATGGTGATGCATAGC 60.366 47.826 0.00 0.00 37.20 2.97
3844 4107 3.782656 AGATCATGGTGATGCATAGCA 57.217 42.857 0.00 4.86 44.86 3.49
3845 4108 4.094830 AGATCATGGTGATGCATAGCAA 57.905 40.909 0.00 0.00 43.62 3.91
3846 4109 3.819337 AGATCATGGTGATGCATAGCAAC 59.181 43.478 0.00 0.00 43.62 4.17
3847 4110 1.941975 TCATGGTGATGCATAGCAACG 59.058 47.619 0.00 1.35 43.62 4.10
3848 4111 1.941975 CATGGTGATGCATAGCAACGA 59.058 47.619 0.00 0.00 43.62 3.85
3849 4112 1.655484 TGGTGATGCATAGCAACGAG 58.345 50.000 0.00 0.00 43.62 4.18
3850 4113 1.206849 TGGTGATGCATAGCAACGAGA 59.793 47.619 0.00 0.00 43.62 4.04
3851 4114 1.863454 GGTGATGCATAGCAACGAGAG 59.137 52.381 0.00 0.00 43.62 3.20
3852 4115 1.863454 GTGATGCATAGCAACGAGAGG 59.137 52.381 0.00 0.00 43.62 3.69
3853 4116 1.202568 TGATGCATAGCAACGAGAGGG 60.203 52.381 0.00 0.00 43.62 4.30
3854 4117 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
3855 4118 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
3856 4119 0.249657 GCATAGCAACGAGAGGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
3857 4120 1.403814 CATAGCAACGAGAGGGGAGA 58.596 55.000 0.00 0.00 0.00 3.71
3858 4121 1.339610 CATAGCAACGAGAGGGGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
3859 4122 0.331954 TAGCAACGAGAGGGGAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
3860 4123 1.216710 GCAACGAGAGGGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
3861 4124 1.536943 GCAACGAGAGGGGAGAGTGT 61.537 60.000 0.00 0.00 0.00 3.55
3862 4125 0.969894 CAACGAGAGGGGAGAGTGTT 59.030 55.000 0.00 0.00 0.00 3.32
3863 4126 0.969894 AACGAGAGGGGAGAGTGTTG 59.030 55.000 0.00 0.00 0.00 3.33
3864 4127 0.178958 ACGAGAGGGGAGAGTGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
3865 4128 0.528470 CGAGAGGGGAGAGTGTTGTC 59.472 60.000 0.00 0.00 0.00 3.18
3866 4129 0.899019 GAGAGGGGAGAGTGTTGTCC 59.101 60.000 0.00 0.00 36.03 4.02
3867 4130 0.191064 AGAGGGGAGAGTGTTGTCCA 59.809 55.000 0.00 0.00 38.50 4.02
3868 4131 0.321996 GAGGGGAGAGTGTTGTCCAC 59.678 60.000 0.00 0.00 40.47 4.02
3869 4132 1.472662 AGGGGAGAGTGTTGTCCACG 61.473 60.000 0.00 0.00 44.77 4.94
3871 4134 4.748514 AGGGGAGAGTGTTGTCCACGTA 62.749 54.545 0.00 0.00 44.77 3.57
3876 4139 3.206090 GTGTTGTCCACGTACCCTC 57.794 57.895 0.00 0.00 33.61 4.30
3877 4140 0.665369 GTGTTGTCCACGTACCCTCG 60.665 60.000 0.00 0.00 33.61 4.63
3878 4141 1.108727 TGTTGTCCACGTACCCTCGT 61.109 55.000 0.00 0.00 45.10 4.18
3879 4142 0.881118 GTTGTCCACGTACCCTCGTA 59.119 55.000 0.00 0.00 42.27 3.43
3880 4143 1.135575 GTTGTCCACGTACCCTCGTAG 60.136 57.143 0.00 0.00 42.27 3.51
3881 4144 0.324614 TGTCCACGTACCCTCGTAGA 59.675 55.000 0.00 0.00 42.27 2.59
3882 4145 0.729690 GTCCACGTACCCTCGTAGAC 59.270 60.000 0.00 2.79 42.50 2.59
3883 4146 0.392998 TCCACGTACCCTCGTAGACC 60.393 60.000 0.00 0.00 42.27 3.85
3884 4147 1.709147 CCACGTACCCTCGTAGACCG 61.709 65.000 0.00 0.00 42.27 4.79
3885 4148 0.740868 CACGTACCCTCGTAGACCGA 60.741 60.000 0.00 0.00 45.00 4.69
3886 4149 0.036388 ACGTACCCTCGTAGACCGAA 60.036 55.000 0.00 0.00 46.75 4.30
3887 4150 1.086696 CGTACCCTCGTAGACCGAAA 58.913 55.000 0.00 0.00 46.75 3.46
3888 4151 1.063174 CGTACCCTCGTAGACCGAAAG 59.937 57.143 0.00 0.00 46.75 2.62
3889 4152 1.098050 TACCCTCGTAGACCGAAAGC 58.902 55.000 0.00 0.00 46.75 3.51
3890 4153 1.226603 CCCTCGTAGACCGAAAGCG 60.227 63.158 0.00 0.00 46.75 4.68
3907 4170 3.921081 CGGAAGCGTTAGAACAACG 57.079 52.632 5.22 5.22 45.56 4.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 1.915141 CAGATTTCAGGGCAGTTGGT 58.085 50.000 0.00 0.00 0.00 3.67
101 102 0.401738 TTGAAGGGTGAGAAGCAGGG 59.598 55.000 0.00 0.00 0.00 4.45
110 111 2.488204 TGCGATTCATTGAAGGGTGA 57.512 45.000 5.21 0.00 0.00 4.02
156 157 5.144456 GCATCCTCATGTATAGGGCACCA 62.144 52.174 0.00 0.00 41.49 4.17
158 159 2.704572 GCATCCTCATGTATAGGGCAC 58.295 52.381 0.00 0.00 34.66 5.01
160 161 2.009042 GCGCATCCTCATGTATAGGGC 61.009 57.143 0.30 1.24 34.66 5.19
161 162 1.737029 CGCGCATCCTCATGTATAGGG 60.737 57.143 8.75 0.00 34.66 3.53
164 186 2.755103 AGATCGCGCATCCTCATGTATA 59.245 45.455 8.75 0.00 31.86 1.47
218 240 0.179067 TGCCTTACCGCCGGAATTAG 60.179 55.000 11.71 0.58 0.00 1.73
242 297 1.352156 GAAGTACTCGCAAGGCACGG 61.352 60.000 0.00 0.00 38.47 4.94
261 316 6.021596 CCGTTCTCGAAGAAATATTTTGGTG 58.978 40.000 1.43 0.00 35.75 4.17
283 338 3.764885 CAGGAAATGCTAAAGAACCCG 57.235 47.619 0.00 0.00 0.00 5.28
296 351 3.443681 CACGAATTTGTAGGGCAGGAAAT 59.556 43.478 0.00 0.00 0.00 2.17
302 357 2.552599 TGTCACGAATTTGTAGGGCA 57.447 45.000 0.00 0.00 0.00 5.36
384 439 7.299787 TGGTATGCGATCGTAATAGTAGTAG 57.700 40.000 17.81 0.00 0.00 2.57
385 440 7.854557 ATGGTATGCGATCGTAATAGTAGTA 57.145 36.000 17.81 0.00 0.00 1.82
386 441 6.754702 ATGGTATGCGATCGTAATAGTAGT 57.245 37.500 17.81 0.00 0.00 2.73
401 456 8.223769 CGACACAGAAATTAAGATATGGTATGC 58.776 37.037 0.00 0.00 0.00 3.14
440 495 9.893305 CAAGAGTCACTTTATTTACGGAAAAAT 57.107 29.630 0.00 0.00 36.61 1.82
444 499 6.647895 GGTCAAGAGTCACTTTATTTACGGAA 59.352 38.462 0.00 0.00 36.61 4.30
446 501 5.350640 GGGTCAAGAGTCACTTTATTTACGG 59.649 44.000 0.00 0.00 36.61 4.02
447 502 6.164176 AGGGTCAAGAGTCACTTTATTTACG 58.836 40.000 0.00 0.00 36.61 3.18
448 503 8.092687 TGTAGGGTCAAGAGTCACTTTATTTAC 58.907 37.037 0.00 0.00 36.61 2.01
449 504 8.197592 TGTAGGGTCAAGAGTCACTTTATTTA 57.802 34.615 0.00 0.00 36.61 1.40
450 505 7.074653 TGTAGGGTCAAGAGTCACTTTATTT 57.925 36.000 0.00 0.00 36.61 1.40
451 506 6.681729 TGTAGGGTCAAGAGTCACTTTATT 57.318 37.500 0.00 0.00 36.61 1.40
452 507 6.213600 ACATGTAGGGTCAAGAGTCACTTTAT 59.786 38.462 0.00 0.00 36.61 1.40
453 508 5.542635 ACATGTAGGGTCAAGAGTCACTTTA 59.457 40.000 0.00 0.00 36.61 1.85
454 509 4.348168 ACATGTAGGGTCAAGAGTCACTTT 59.652 41.667 0.00 0.00 36.61 2.66
456 511 3.511477 ACATGTAGGGTCAAGAGTCACT 58.489 45.455 0.00 0.00 0.00 3.41
457 512 3.258372 TGACATGTAGGGTCAAGAGTCAC 59.742 47.826 0.00 0.00 41.96 3.67
465 611 4.102524 ACTTTGAACTGACATGTAGGGTCA 59.897 41.667 12.46 12.46 42.62 4.02
482 628 5.586339 TGATGCATTTTCGTTTGACTTTGA 58.414 33.333 0.00 0.00 0.00 2.69
494 640 7.878477 TTCTTTCACAAGATGATGCATTTTC 57.122 32.000 0.00 0.79 38.89 2.29
498 644 7.384115 CACTTTTTCTTTCACAAGATGATGCAT 59.616 33.333 0.00 0.00 38.89 3.96
501 647 7.380602 GGTCACTTTTTCTTTCACAAGATGATG 59.619 37.037 0.00 0.00 38.89 3.07
507 653 5.582689 AGGGTCACTTTTTCTTTCACAAG 57.417 39.130 0.00 0.00 0.00 3.16
508 654 5.337169 CCAAGGGTCACTTTTTCTTTCACAA 60.337 40.000 0.00 0.00 37.29 3.33
510 656 4.441495 CCCAAGGGTCACTTTTTCTTTCAC 60.441 45.833 0.00 0.00 37.29 3.18
511 657 3.704061 CCCAAGGGTCACTTTTTCTTTCA 59.296 43.478 0.00 0.00 37.29 2.69
512 658 3.958147 TCCCAAGGGTCACTTTTTCTTTC 59.042 43.478 4.80 0.00 37.29 2.62
513 659 3.704566 GTCCCAAGGGTCACTTTTTCTTT 59.295 43.478 4.80 0.00 37.29 2.52
514 660 3.296854 GTCCCAAGGGTCACTTTTTCTT 58.703 45.455 4.80 0.00 37.29 2.52
515 661 2.424379 GGTCCCAAGGGTCACTTTTTCT 60.424 50.000 4.80 0.00 37.29 2.52
516 662 1.961394 GGTCCCAAGGGTCACTTTTTC 59.039 52.381 4.80 0.00 37.29 2.29
517 663 1.752788 CGGTCCCAAGGGTCACTTTTT 60.753 52.381 4.80 0.00 37.29 1.94
518 664 0.179001 CGGTCCCAAGGGTCACTTTT 60.179 55.000 4.80 0.00 37.29 2.27
519 665 1.454539 CGGTCCCAAGGGTCACTTT 59.545 57.895 4.80 0.00 37.29 2.66
520 666 3.157680 CGGTCCCAAGGGTCACTT 58.842 61.111 4.80 0.00 41.00 3.16
521 667 3.637273 GCGGTCCCAAGGGTCACT 61.637 66.667 4.80 0.00 36.47 3.41
522 668 4.717313 GGCGGTCCCAAGGGTCAC 62.717 72.222 4.80 0.00 36.47 3.67
530 676 1.304052 CATTCCTTTGGCGGTCCCA 60.304 57.895 0.00 0.00 43.51 4.37
531 677 2.710902 GCATTCCTTTGGCGGTCCC 61.711 63.158 0.00 0.00 0.00 4.46
532 678 1.976474 TGCATTCCTTTGGCGGTCC 60.976 57.895 0.00 0.00 0.00 4.46
534 680 1.530419 TGTGCATTCCTTTGGCGGT 60.530 52.632 0.00 0.00 0.00 5.68
536 682 1.442520 CGTGTGCATTCCTTTGGCG 60.443 57.895 0.00 0.00 0.00 5.69
561 742 3.255395 TGCCTGGAACAACAACATATGTG 59.745 43.478 9.63 6.45 42.99 3.21
571 752 1.388547 TGACTTGTGCCTGGAACAAC 58.611 50.000 16.46 8.55 38.70 3.32
574 755 0.307760 CGTTGACTTGTGCCTGGAAC 59.692 55.000 0.00 0.00 0.00 3.62
593 774 4.608948 TTCTCTTCTCTTTGGTGTCCTC 57.391 45.455 0.00 0.00 0.00 3.71
595 776 9.103861 CTTATTATTCTCTTCTCTTTGGTGTCC 57.896 37.037 0.00 0.00 0.00 4.02
596 777 8.608317 GCTTATTATTCTCTTCTCTTTGGTGTC 58.392 37.037 0.00 0.00 0.00 3.67
647 828 8.675504 TCGTGTCCAACTAATTAAACAAAAGAA 58.324 29.630 0.00 0.00 0.00 2.52
648 829 8.211116 TCGTGTCCAACTAATTAAACAAAAGA 57.789 30.769 0.00 0.00 0.00 2.52
649 830 8.844441 TTCGTGTCCAACTAATTAAACAAAAG 57.156 30.769 0.00 0.00 0.00 2.27
662 843 1.135083 CGGCTCTATTCGTGTCCAACT 60.135 52.381 0.00 0.00 0.00 3.16
665 846 0.892755 AACGGCTCTATTCGTGTCCA 59.107 50.000 0.00 0.00 39.70 4.02
666 847 1.278238 CAACGGCTCTATTCGTGTCC 58.722 55.000 0.00 0.00 39.70 4.02
762 946 2.643232 GGAGTACGTGCGACCCCTT 61.643 63.158 0.00 0.00 0.00 3.95
768 952 0.896940 AAGAAGGGGAGTACGTGCGA 60.897 55.000 0.00 0.00 0.00 5.10
782 966 2.167398 TTGGCGTCTCGGGGAAGAAG 62.167 60.000 0.00 0.00 0.00 2.85
783 967 1.760479 TTTGGCGTCTCGGGGAAGAA 61.760 55.000 0.00 0.00 0.00 2.52
784 968 2.211410 TTTGGCGTCTCGGGGAAGA 61.211 57.895 0.00 0.00 0.00 2.87
792 976 1.092348 GGTAATGGGTTTGGCGTCTC 58.908 55.000 0.00 0.00 0.00 3.36
894 1078 2.352960 GAGGCTTGAACGGATTGATGAC 59.647 50.000 0.00 0.00 0.00 3.06
926 1111 0.331278 TGGCGAAAATGGGATGGAGT 59.669 50.000 0.00 0.00 0.00 3.85
931 1116 3.303351 AGATCTTGGCGAAAATGGGAT 57.697 42.857 0.00 0.00 0.00 3.85
938 1123 2.736721 CACGAAGAAGATCTTGGCGAAA 59.263 45.455 14.00 0.00 36.73 3.46
1005 1190 1.001887 AGAAGACGACGAGGCCTCT 60.002 57.895 29.73 17.05 0.00 3.69
1122 1307 0.035439 GGAAGTGCCGATTCCTCCAA 60.035 55.000 4.81 0.00 42.52 3.53
1188 1373 9.982651 TGTCTAAAGTTCATATATAGTTCTGGC 57.017 33.333 0.00 0.00 0.00 4.85
1234 1419 0.036732 AATCAGACGCCCAAAGCAGA 59.963 50.000 0.00 0.00 44.04 4.26
1264 1449 5.357257 ACGGAATTACGAATGCAATAGTCT 58.643 37.500 18.96 0.00 37.61 3.24
1267 1452 5.676744 CACAACGGAATTACGAATGCAATAG 59.323 40.000 18.96 1.18 37.61 1.73
1274 1459 3.816523 ACCAACACAACGGAATTACGAAT 59.183 39.130 18.96 1.74 37.61 3.34
1313 1498 1.131826 CGCCTGCCGTAAAACGAAG 59.868 57.895 0.15 0.00 46.05 3.79
1317 1502 2.476686 GGTTATTCGCCTGCCGTAAAAC 60.477 50.000 0.00 0.00 38.35 2.43
1324 1510 1.017387 CTGAAGGTTATTCGCCTGCC 58.983 55.000 0.00 0.00 36.30 4.85
1325 1511 1.398390 CACTGAAGGTTATTCGCCTGC 59.602 52.381 0.00 0.00 36.30 4.85
1416 1602 6.860023 AGTGAGAAAAGATGCAAAAAGAATCG 59.140 34.615 0.00 0.00 37.36 3.34
1427 1614 5.766222 ACATTGTGAAGTGAGAAAAGATGC 58.234 37.500 0.00 0.00 0.00 3.91
1428 1615 7.420002 TGAACATTGTGAAGTGAGAAAAGATG 58.580 34.615 0.00 0.00 0.00 2.90
1436 1624 5.276270 CCAAACTGAACATTGTGAAGTGAG 58.724 41.667 5.63 2.83 0.00 3.51
1439 1627 3.446873 TGCCAAACTGAACATTGTGAAGT 59.553 39.130 0.00 0.00 0.00 3.01
1443 1631 3.784338 AGTTGCCAAACTGAACATTGTG 58.216 40.909 0.00 0.00 45.12 3.33
1444 1632 4.470334 AAGTTGCCAAACTGAACATTGT 57.530 36.364 0.00 0.00 46.15 2.71
1445 1633 4.869297 TCAAAGTTGCCAAACTGAACATTG 59.131 37.500 0.00 0.00 46.15 2.82
1446 1634 5.083533 TCAAAGTTGCCAAACTGAACATT 57.916 34.783 0.00 0.00 46.15 2.71
1447 1635 4.734398 TCAAAGTTGCCAAACTGAACAT 57.266 36.364 0.00 0.00 46.15 2.71
1449 1637 4.051237 GGATCAAAGTTGCCAAACTGAAC 58.949 43.478 0.00 0.00 46.15 3.18
1482 1684 0.482446 TTCAGGGGGCTTGTTCACAT 59.518 50.000 0.00 0.00 0.00 3.21
1493 1695 1.975407 CTGCAGCAACTTCAGGGGG 60.975 63.158 0.00 0.00 0.00 5.40
1560 1762 2.865308 CACAGCGAGCATGTGTGG 59.135 61.111 14.83 0.00 42.47 4.17
1650 1852 1.091771 ACATGATGCAGTAGCCGTGC 61.092 55.000 0.00 0.00 41.13 5.34
1656 1858 2.047040 CGCTCGTACATGATGCAGTAG 58.953 52.381 0.00 0.00 0.00 2.57
1687 1889 3.432588 AGTCGTGCGTCTCTCCCG 61.433 66.667 0.00 0.00 0.00 5.14
1816 2018 6.055588 TGGCTTCTTGGATAGCTAATTGTAC 58.944 40.000 0.00 0.00 37.54 2.90
1831 2033 4.942483 AGTTTCTGATCATCTGGCTTCTTG 59.058 41.667 0.00 0.00 0.00 3.02
2035 2238 3.056035 AGTGTTCGTCAGGAATAAGGACC 60.056 47.826 0.00 0.00 36.92 4.46
2071 2274 9.155053 GCACATGCGTTATTATTTTAAGAGTAC 57.845 33.333 0.00 0.00 0.00 2.73
2090 2301 1.457346 ACAAGGAGCTAAGCACATGC 58.543 50.000 0.00 0.00 42.49 4.06
2201 2412 9.449719 AATTTCTGATCGTACCATAAGAAAACT 57.550 29.630 14.74 5.25 36.98 2.66
2217 2428 7.325660 TGCATCTTCTTACCAATTTCTGATC 57.674 36.000 0.00 0.00 0.00 2.92
2224 2435 7.831193 AGTTCAGTATGCATCTTCTTACCAATT 59.169 33.333 0.19 0.00 34.76 2.32
2235 2446 4.080695 ACCATCACAGTTCAGTATGCATCT 60.081 41.667 0.19 0.00 34.76 2.90
2257 2468 1.956477 ACCTGAAGTCACAAATGGCAC 59.044 47.619 0.00 0.00 30.46 5.01
2453 2665 1.065126 GGATCCTGAAGTTCCACCTGG 60.065 57.143 3.84 0.00 0.00 4.45
2532 2744 0.817013 CGCTGTAAATGGGTGGCATT 59.183 50.000 0.00 0.00 0.00 3.56
2573 2785 8.295288 AGAACACAAGATGCTAAAGAAATGAAG 58.705 33.333 0.00 0.00 0.00 3.02
2601 2813 2.628178 TCAGTCGAGTGTTTCTGACCAT 59.372 45.455 19.41 0.00 32.95 3.55
2607 2819 2.476619 CGCATTTCAGTCGAGTGTTTCT 59.523 45.455 19.41 1.43 0.00 2.52
2612 2824 1.421485 GGCGCATTTCAGTCGAGTG 59.579 57.895 14.33 14.33 0.00 3.51
2635 2847 5.046878 TCCATTTCCTGTGTCGTTACAGTAT 60.047 40.000 16.49 7.69 45.12 2.12
2660 2872 1.078214 CCCTCTGAAATCGGCTGCA 60.078 57.895 0.50 0.00 0.00 4.41
2678 2890 1.519455 CCATTGGTCCGAGACGAGC 60.519 63.158 0.00 0.00 32.65 5.03
2702 2914 0.670546 CAGTGTTGCCTACCACTCCG 60.671 60.000 0.00 0.00 0.00 4.63
2792 3016 0.817654 TGTCCTCTGCAGTATCACCG 59.182 55.000 14.67 0.00 0.00 4.94
2811 3035 2.583319 CACGCGTCGGCATGAGAT 60.583 61.111 9.86 0.00 33.28 2.75
2923 3147 1.902508 TCCTCACAGATGAACCTGGTC 59.097 52.381 0.00 0.00 38.44 4.02
2935 3159 1.819229 CATCTCCCGGTCCTCACAG 59.181 63.158 0.00 0.00 0.00 3.66
2969 3193 2.819984 TTCCGGATCAGGCAGTTGGC 62.820 60.000 4.15 0.00 43.74 4.52
3032 3256 1.292223 GAAGCTACTGCACCGTGGA 59.708 57.895 0.00 0.00 42.74 4.02
3051 3275 5.625656 GCAGACTCTTTCCTAGTGCTAACAT 60.626 44.000 0.00 0.00 0.00 2.71
3156 3412 3.246619 GCTGTACTTGGAGAAGAACGAG 58.753 50.000 0.00 0.00 32.98 4.18
3216 3472 4.108699 TGAAAAATGGAATTGCTAGCCG 57.891 40.909 13.29 0.00 36.10 5.52
3218 3474 4.741676 CGGATGAAAAATGGAATTGCTAGC 59.258 41.667 8.10 8.10 36.10 3.42
3219 3475 5.163519 ACCGGATGAAAAATGGAATTGCTAG 60.164 40.000 9.46 0.00 36.10 3.42
3236 3492 1.401552 CTAAATGCACACCACCGGATG 59.598 52.381 9.46 5.95 0.00 3.51
3237 3493 1.280710 TCTAAATGCACACCACCGGAT 59.719 47.619 9.46 0.00 0.00 4.18
3238 3494 0.687920 TCTAAATGCACACCACCGGA 59.312 50.000 9.46 0.00 0.00 5.14
3239 3495 1.086696 CTCTAAATGCACACCACCGG 58.913 55.000 0.00 0.00 0.00 5.28
3240 3496 0.447801 GCTCTAAATGCACACCACCG 59.552 55.000 0.00 0.00 0.00 4.94
3245 3507 4.320057 GCCATAGATGCTCTAAATGCACAC 60.320 45.833 0.00 0.00 43.59 3.82
3246 3508 3.817084 GCCATAGATGCTCTAAATGCACA 59.183 43.478 0.00 0.00 43.59 4.57
3247 3509 3.190118 GGCCATAGATGCTCTAAATGCAC 59.810 47.826 0.00 0.00 43.59 4.57
3249 3511 2.417933 CGGCCATAGATGCTCTAAATGC 59.582 50.000 2.24 0.00 31.96 3.56
3252 3514 2.300152 CTCCGGCCATAGATGCTCTAAA 59.700 50.000 2.24 0.00 31.96 1.85
3308 3571 1.388065 TTTTGTCCGGCAGTGGTTGG 61.388 55.000 0.00 0.00 0.00 3.77
3310 3573 2.889200 TTTTTGTCCGGCAGTGGTT 58.111 47.368 0.00 0.00 0.00 3.67
3311 3574 4.668151 TTTTTGTCCGGCAGTGGT 57.332 50.000 0.00 0.00 0.00 4.16
3325 3588 3.196901 GGTCTTGGGTGGTGAAAGTTTTT 59.803 43.478 0.00 0.00 0.00 1.94
3334 3597 0.182537 TTGTCAGGTCTTGGGTGGTG 59.817 55.000 0.00 0.00 0.00 4.17
3338 3601 1.843851 TGAGTTTGTCAGGTCTTGGGT 59.156 47.619 0.00 0.00 0.00 4.51
3339 3602 2.638480 TGAGTTTGTCAGGTCTTGGG 57.362 50.000 0.00 0.00 0.00 4.12
3350 3613 2.285977 GGACGTTTGGACTGAGTTTGT 58.714 47.619 0.00 0.00 0.00 2.83
3360 3623 1.070786 GTCAGCCTGGACGTTTGGA 59.929 57.895 0.00 0.00 0.00 3.53
3387 3650 2.505672 TATGAGCTGGGTATTGGGGA 57.494 50.000 0.00 0.00 0.00 4.81
3426 3689 0.241213 ATATCGGACGCATCCAGACG 59.759 55.000 0.00 0.00 46.67 4.18
3428 3691 1.269723 GACATATCGGACGCATCCAGA 59.730 52.381 0.00 0.00 46.67 3.86
3429 3692 1.702886 GACATATCGGACGCATCCAG 58.297 55.000 0.00 0.00 46.67 3.86
3430 3693 0.039527 CGACATATCGGACGCATCCA 60.040 55.000 0.00 0.00 46.67 3.41
3443 3706 2.420568 GCCTGTCCGACCCGACATA 61.421 63.158 0.00 0.00 41.78 2.29
3462 3725 4.941263 TGAAGTGGATTTGAAATAGGTCCG 59.059 41.667 0.00 0.00 0.00 4.79
3466 3729 9.143631 GTCAATTTGAAGTGGATTTGAAATAGG 57.856 33.333 0.00 0.00 0.00 2.57
3468 3731 9.695526 CAGTCAATTTGAAGTGGATTTGAAATA 57.304 29.630 0.00 0.00 0.00 1.40
3472 3735 5.598005 ACCAGTCAATTTGAAGTGGATTTGA 59.402 36.000 25.44 0.00 36.65 2.69
3481 3744 5.710513 TTGATGGACCAGTCAATTTGAAG 57.289 39.130 12.57 0.00 29.93 3.02
3482 3745 6.669125 ATTTGATGGACCAGTCAATTTGAA 57.331 33.333 15.62 5.74 34.60 2.69
3483 3746 6.267242 TCAATTTGATGGACCAGTCAATTTGA 59.733 34.615 27.41 27.41 44.19 2.69
3484 3747 6.457355 TCAATTTGATGGACCAGTCAATTTG 58.543 36.000 25.55 25.55 41.89 2.32
3485 3748 6.669125 TCAATTTGATGGACCAGTCAATTT 57.331 33.333 15.62 14.97 34.60 1.82
3486 3749 5.337009 GCTCAATTTGATGGACCAGTCAATT 60.337 40.000 15.62 9.67 34.60 2.32
3487 3750 4.159135 GCTCAATTTGATGGACCAGTCAAT 59.841 41.667 15.62 5.07 34.60 2.57
3488 3751 3.507233 GCTCAATTTGATGGACCAGTCAA 59.493 43.478 12.57 12.57 32.86 3.18
3489 3752 3.084039 GCTCAATTTGATGGACCAGTCA 58.916 45.455 0.00 1.44 0.00 3.41
3490 3753 2.096496 CGCTCAATTTGATGGACCAGTC 59.904 50.000 0.00 0.00 0.00 3.51
3491 3754 2.086869 CGCTCAATTTGATGGACCAGT 58.913 47.619 0.00 0.00 0.00 4.00
3492 3755 1.202222 GCGCTCAATTTGATGGACCAG 60.202 52.381 0.00 0.00 0.00 4.00
3493 3756 0.810648 GCGCTCAATTTGATGGACCA 59.189 50.000 0.00 0.00 0.00 4.02
3494 3757 0.810648 TGCGCTCAATTTGATGGACC 59.189 50.000 9.73 0.00 0.00 4.46
3495 3758 1.470098 AGTGCGCTCAATTTGATGGAC 59.530 47.619 9.73 12.51 0.00 4.02
3496 3759 1.739466 GAGTGCGCTCAATTTGATGGA 59.261 47.619 22.25 0.00 41.29 3.41
3497 3760 1.202222 GGAGTGCGCTCAATTTGATGG 60.202 52.381 27.48 0.00 43.37 3.51
3498 3761 1.741706 AGGAGTGCGCTCAATTTGATG 59.258 47.619 27.48 0.00 43.37 3.07
3499 3762 2.012673 GAGGAGTGCGCTCAATTTGAT 58.987 47.619 27.48 5.11 43.37 2.57
3500 3763 1.442769 GAGGAGTGCGCTCAATTTGA 58.557 50.000 27.48 0.00 43.37 2.69
3501 3764 0.449388 GGAGGAGTGCGCTCAATTTG 59.551 55.000 27.48 0.00 43.37 2.32
3502 3765 0.678048 GGGAGGAGTGCGCTCAATTT 60.678 55.000 27.48 10.63 43.37 1.82
3503 3766 1.078143 GGGAGGAGTGCGCTCAATT 60.078 57.895 27.48 13.09 43.37 2.32
3504 3767 2.586792 GGGAGGAGTGCGCTCAAT 59.413 61.111 27.48 16.02 43.37 2.57
3505 3768 4.069232 CGGGAGGAGTGCGCTCAA 62.069 66.667 27.48 0.00 43.37 3.02
3507 3770 4.803426 CACGGGAGGAGTGCGCTC 62.803 72.222 19.20 19.20 40.93 5.03
3510 3773 4.436998 GGACACGGGAGGAGTGCG 62.437 72.222 0.00 0.00 42.94 5.34
3511 3774 2.660064 ATGGACACGGGAGGAGTGC 61.660 63.158 0.00 0.00 42.94 4.40
3512 3775 1.219124 CATGGACACGGGAGGAGTG 59.781 63.158 0.00 0.00 44.57 3.51
3513 3776 2.660064 GCATGGACACGGGAGGAGT 61.660 63.158 0.00 0.00 0.00 3.85
3514 3777 2.187946 GCATGGACACGGGAGGAG 59.812 66.667 0.00 0.00 0.00 3.69
3515 3778 3.399181 GGCATGGACACGGGAGGA 61.399 66.667 0.00 0.00 0.00 3.71
3516 3779 4.838152 CGGCATGGACACGGGAGG 62.838 72.222 0.00 0.00 0.00 4.30
3534 3797 3.902112 AAGGGTGCAGGTGGGTGG 61.902 66.667 0.00 0.00 0.00 4.61
3535 3798 2.598394 CAAGGGTGCAGGTGGGTG 60.598 66.667 0.00 0.00 0.00 4.61
3545 3808 1.740296 CGAACGGGTAGCAAGGGTG 60.740 63.158 0.00 0.00 0.00 4.61
3546 3809 2.660802 CGAACGGGTAGCAAGGGT 59.339 61.111 0.00 0.00 0.00 4.34
3547 3810 2.818274 GCGAACGGGTAGCAAGGG 60.818 66.667 0.00 0.00 0.00 3.95
3548 3811 3.186047 CGCGAACGGGTAGCAAGG 61.186 66.667 0.00 0.00 34.97 3.61
3549 3812 3.849953 GCGCGAACGGGTAGCAAG 61.850 66.667 12.10 0.00 40.57 4.01
3550 3813 4.367023 AGCGCGAACGGGTAGCAA 62.367 61.111 12.10 0.00 40.57 3.91
3577 3840 1.068055 ACAACATCTACGACGGTGGAC 60.068 52.381 0.00 0.00 36.41 4.02
3578 3841 1.250328 ACAACATCTACGACGGTGGA 58.750 50.000 0.00 0.00 38.09 4.02
3579 3842 1.724623 CAACAACATCTACGACGGTGG 59.275 52.381 0.00 0.00 0.00 4.61
3580 3843 2.400399 ACAACAACATCTACGACGGTG 58.600 47.619 0.00 0.00 0.00 4.94
3581 3844 2.669364 GACAACAACATCTACGACGGT 58.331 47.619 0.00 0.00 0.00 4.83
3582 3845 1.647213 CGACAACAACATCTACGACGG 59.353 52.381 0.00 0.00 0.00 4.79
3583 3846 2.337644 GTCGACAACAACATCTACGACG 59.662 50.000 11.55 0.00 38.92 5.12
3584 3847 3.562505 AGTCGACAACAACATCTACGAC 58.437 45.455 19.50 0.00 45.36 4.34
3585 3848 3.909776 AGTCGACAACAACATCTACGA 57.090 42.857 19.50 0.00 0.00 3.43
3586 3849 3.850273 GGTAGTCGACAACAACATCTACG 59.150 47.826 19.50 0.00 0.00 3.51
3587 3850 5.056894 AGGTAGTCGACAACAACATCTAC 57.943 43.478 19.50 7.73 0.00 2.59
3588 3851 5.717078 AAGGTAGTCGACAACAACATCTA 57.283 39.130 19.50 0.00 0.00 1.98
3589 3852 4.602340 AAGGTAGTCGACAACAACATCT 57.398 40.909 19.50 0.00 0.00 2.90
3590 3853 5.519206 GGATAAGGTAGTCGACAACAACATC 59.481 44.000 19.50 12.46 0.00 3.06
3591 3854 5.416947 GGATAAGGTAGTCGACAACAACAT 58.583 41.667 19.50 5.06 0.00 2.71
3592 3855 4.616604 CGGATAAGGTAGTCGACAACAACA 60.617 45.833 19.50 0.00 0.00 3.33
3593 3856 3.855950 CGGATAAGGTAGTCGACAACAAC 59.144 47.826 19.50 9.81 0.00 3.32
3594 3857 3.674138 GCGGATAAGGTAGTCGACAACAA 60.674 47.826 19.50 0.00 0.00 2.83
3595 3858 2.159338 GCGGATAAGGTAGTCGACAACA 60.159 50.000 19.50 0.00 0.00 3.33
3596 3859 2.457970 GCGGATAAGGTAGTCGACAAC 58.542 52.381 19.50 6.63 0.00 3.32
3597 3860 1.406539 GGCGGATAAGGTAGTCGACAA 59.593 52.381 19.50 0.00 0.00 3.18
3598 3861 1.027357 GGCGGATAAGGTAGTCGACA 58.973 55.000 19.50 0.48 0.00 4.35
3599 3862 1.027357 TGGCGGATAAGGTAGTCGAC 58.973 55.000 7.70 7.70 0.00 4.20
3600 3863 1.027357 GTGGCGGATAAGGTAGTCGA 58.973 55.000 0.00 0.00 0.00 4.20
3601 3864 0.031721 GGTGGCGGATAAGGTAGTCG 59.968 60.000 0.00 0.00 0.00 4.18
3602 3865 0.031721 CGGTGGCGGATAAGGTAGTC 59.968 60.000 0.00 0.00 0.00 2.59
3603 3866 1.397390 CCGGTGGCGGATAAGGTAGT 61.397 60.000 0.00 0.00 0.00 2.73
3604 3867 1.366366 CCGGTGGCGGATAAGGTAG 59.634 63.158 0.00 0.00 0.00 3.18
3605 3868 2.135581 CCCGGTGGCGGATAAGGTA 61.136 63.158 0.00 0.00 0.00 3.08
3606 3869 3.476419 CCCGGTGGCGGATAAGGT 61.476 66.667 0.00 0.00 0.00 3.50
3607 3870 4.250305 CCCCGGTGGCGGATAAGG 62.250 72.222 0.00 0.00 0.00 2.69
3608 3871 4.250305 CCCCCGGTGGCGGATAAG 62.250 72.222 0.00 0.00 0.00 1.73
3616 3879 4.900704 CATCCATGCCCCCGGTGG 62.901 72.222 0.00 0.00 0.00 4.61
3617 3880 3.137385 ATCATCCATGCCCCCGGTG 62.137 63.158 0.00 0.00 0.00 4.94
3618 3881 2.778278 ATCATCCATGCCCCCGGT 60.778 61.111 0.00 0.00 0.00 5.28
3619 3882 2.282674 CATCATCCATGCCCCCGG 60.283 66.667 0.00 0.00 0.00 5.73
3626 3889 2.265904 CGCCCAGGCATCATCCATG 61.266 63.158 9.78 0.00 42.06 3.66
3627 3890 2.114625 CGCCCAGGCATCATCCAT 59.885 61.111 9.78 0.00 42.06 3.41
3628 3891 4.193893 CCGCCCAGGCATCATCCA 62.194 66.667 9.78 0.00 42.06 3.41
3629 3892 2.703675 ATTCCGCCCAGGCATCATCC 62.704 60.000 9.78 0.00 42.06 3.51
3630 3893 1.228367 ATTCCGCCCAGGCATCATC 60.228 57.895 9.78 0.00 42.06 2.92
3631 3894 1.228367 GATTCCGCCCAGGCATCAT 60.228 57.895 9.78 0.00 41.49 2.45
3632 3895 2.192979 GATTCCGCCCAGGCATCA 59.807 61.111 9.78 0.00 41.49 3.07
3633 3896 2.595754 GGATTCCGCCCAGGCATC 60.596 66.667 9.78 4.29 41.19 3.91
3634 3897 4.569180 CGGATTCCGCCCAGGCAT 62.569 66.667 12.95 0.00 41.17 4.40
3648 3911 2.365105 GTCCAGGATCCCCACGGA 60.365 66.667 8.55 6.93 44.33 4.69
3649 3912 2.365635 AGTCCAGGATCCCCACGG 60.366 66.667 8.55 4.37 33.88 4.94
3650 3913 1.990060 ACAGTCCAGGATCCCCACG 60.990 63.158 8.55 2.47 33.88 4.94
3651 3914 1.604378 CACAGTCCAGGATCCCCAC 59.396 63.158 8.55 2.43 33.88 4.61
3652 3915 1.616327 CCACAGTCCAGGATCCCCA 60.616 63.158 8.55 0.00 33.88 4.96
3653 3916 1.208165 AACCACAGTCCAGGATCCCC 61.208 60.000 8.55 0.00 0.00 4.81
3654 3917 0.035056 CAACCACAGTCCAGGATCCC 60.035 60.000 8.55 0.00 0.00 3.85
3655 3918 0.678048 GCAACCACAGTCCAGGATCC 60.678 60.000 2.48 2.48 0.00 3.36
3656 3919 0.678048 GGCAACCACAGTCCAGGATC 60.678 60.000 0.00 0.00 0.00 3.36
3657 3920 1.380302 GGCAACCACAGTCCAGGAT 59.620 57.895 0.00 0.00 0.00 3.24
3658 3921 2.055689 CTGGCAACCACAGTCCAGGA 62.056 60.000 0.00 0.00 41.71 3.86
3659 3922 1.601759 CTGGCAACCACAGTCCAGG 60.602 63.158 0.00 0.00 41.71 4.45
3660 3923 1.149174 ACTGGCAACCACAGTCCAG 59.851 57.895 5.65 5.65 45.50 3.86
3661 3924 3.330192 ACTGGCAACCACAGTCCA 58.670 55.556 0.00 0.00 45.50 4.02
3673 3936 1.795170 TTCTTCGCCTTGCAACTGGC 61.795 55.000 17.57 17.57 45.25 4.85
3674 3937 0.883833 ATTCTTCGCCTTGCAACTGG 59.116 50.000 0.00 0.00 0.00 4.00
3675 3938 1.267806 ACATTCTTCGCCTTGCAACTG 59.732 47.619 0.00 0.00 0.00 3.16
3676 3939 1.537202 GACATTCTTCGCCTTGCAACT 59.463 47.619 0.00 0.00 0.00 3.16
3677 3940 1.725931 CGACATTCTTCGCCTTGCAAC 60.726 52.381 0.00 0.00 31.03 4.17
3678 3941 0.516877 CGACATTCTTCGCCTTGCAA 59.483 50.000 0.00 0.00 31.03 4.08
3679 3942 2.161831 CGACATTCTTCGCCTTGCA 58.838 52.632 0.00 0.00 31.03 4.08
3686 3949 1.002366 CCTTCTGGCGACATTCTTCG 58.998 55.000 0.00 0.00 41.51 3.79
3687 3950 1.066143 TCCCTTCTGGCGACATTCTTC 60.066 52.381 0.00 0.00 41.51 2.87
3688 3951 0.984230 TCCCTTCTGGCGACATTCTT 59.016 50.000 0.00 0.00 41.51 2.52
3689 3952 0.539051 CTCCCTTCTGGCGACATTCT 59.461 55.000 0.00 0.00 41.51 2.40
3690 3953 1.092345 GCTCCCTTCTGGCGACATTC 61.092 60.000 0.00 0.00 41.51 2.67
3691 3954 1.078143 GCTCCCTTCTGGCGACATT 60.078 57.895 0.00 0.00 41.51 2.71
3692 3955 2.586792 GCTCCCTTCTGGCGACAT 59.413 61.111 0.00 0.00 41.51 3.06
3698 3961 3.432051 CTACGGCGCTCCCTTCTGG 62.432 68.421 6.90 0.00 0.00 3.86
3699 3962 2.105128 CTACGGCGCTCCCTTCTG 59.895 66.667 6.90 0.00 0.00 3.02
3700 3963 3.148279 CCTACGGCGCTCCCTTCT 61.148 66.667 6.90 0.00 0.00 2.85
3701 3964 2.630592 CTTCCTACGGCGCTCCCTTC 62.631 65.000 6.90 0.00 0.00 3.46
3702 3965 2.682494 TTCCTACGGCGCTCCCTT 60.682 61.111 6.90 0.00 0.00 3.95
3703 3966 3.148279 CTTCCTACGGCGCTCCCT 61.148 66.667 6.90 0.00 0.00 4.20
3704 3967 4.893601 GCTTCCTACGGCGCTCCC 62.894 72.222 6.90 0.00 0.00 4.30
3705 3968 2.487532 TAGCTTCCTACGGCGCTCC 61.488 63.158 6.90 0.00 32.99 4.70
3706 3969 1.299240 GTAGCTTCCTACGGCGCTC 60.299 63.158 6.90 0.00 35.06 5.03
3707 3970 2.806237 GTAGCTTCCTACGGCGCT 59.194 61.111 6.90 0.00 35.06 5.92
3721 3984 2.008329 ACTACCTTCTCACTCGCGTAG 58.992 52.381 5.77 4.90 0.00 3.51
3722 3985 2.105006 ACTACCTTCTCACTCGCGTA 57.895 50.000 5.77 0.00 0.00 4.42
3723 3986 1.068472 CAACTACCTTCTCACTCGCGT 60.068 52.381 5.77 0.00 0.00 6.01
3724 3987 1.618861 CAACTACCTTCTCACTCGCG 58.381 55.000 0.00 0.00 0.00 5.87
3725 3988 1.336887 TGCAACTACCTTCTCACTCGC 60.337 52.381 0.00 0.00 0.00 5.03
3726 3989 2.229062 TCTGCAACTACCTTCTCACTCG 59.771 50.000 0.00 0.00 0.00 4.18
3727 3990 3.508012 TCTCTGCAACTACCTTCTCACTC 59.492 47.826 0.00 0.00 0.00 3.51
3728 3991 3.501349 TCTCTGCAACTACCTTCTCACT 58.499 45.455 0.00 0.00 0.00 3.41
3729 3992 3.508012 TCTCTCTGCAACTACCTTCTCAC 59.492 47.826 0.00 0.00 0.00 3.51
3730 3993 3.767711 TCTCTCTGCAACTACCTTCTCA 58.232 45.455 0.00 0.00 0.00 3.27
3731 3994 4.497340 CGATCTCTCTGCAACTACCTTCTC 60.497 50.000 0.00 0.00 0.00 2.87
3732 3995 3.380004 CGATCTCTCTGCAACTACCTTCT 59.620 47.826 0.00 0.00 0.00 2.85
3733 3996 3.490078 CCGATCTCTCTGCAACTACCTTC 60.490 52.174 0.00 0.00 0.00 3.46
3734 3997 2.428890 CCGATCTCTCTGCAACTACCTT 59.571 50.000 0.00 0.00 0.00 3.50
3735 3998 2.028130 CCGATCTCTCTGCAACTACCT 58.972 52.381 0.00 0.00 0.00 3.08
3736 3999 1.751924 ACCGATCTCTCTGCAACTACC 59.248 52.381 0.00 0.00 0.00 3.18
3737 4000 2.803451 CACCGATCTCTCTGCAACTAC 58.197 52.381 0.00 0.00 0.00 2.73
3738 4001 1.135139 GCACCGATCTCTCTGCAACTA 59.865 52.381 0.00 0.00 0.00 2.24
3739 4002 0.108424 GCACCGATCTCTCTGCAACT 60.108 55.000 0.00 0.00 0.00 3.16
3740 4003 1.416813 CGCACCGATCTCTCTGCAAC 61.417 60.000 0.00 0.00 0.00 4.17
3741 4004 1.153765 CGCACCGATCTCTCTGCAA 60.154 57.895 0.00 0.00 0.00 4.08
3742 4005 2.491621 CGCACCGATCTCTCTGCA 59.508 61.111 0.00 0.00 0.00 4.41
3743 4006 2.279120 CCGCACCGATCTCTCTGC 60.279 66.667 0.00 0.00 0.00 4.26
3744 4007 1.098129 TCTCCGCACCGATCTCTCTG 61.098 60.000 0.00 0.00 0.00 3.35
3745 4008 0.179004 ATCTCCGCACCGATCTCTCT 60.179 55.000 0.00 0.00 0.00 3.10
3746 4009 0.039617 CATCTCCGCACCGATCTCTC 60.040 60.000 0.00 0.00 0.00 3.20
3747 4010 1.459455 CCATCTCCGCACCGATCTCT 61.459 60.000 0.00 0.00 0.00 3.10
3748 4011 1.006805 CCATCTCCGCACCGATCTC 60.007 63.158 0.00 0.00 0.00 2.75
3749 4012 3.133014 CCATCTCCGCACCGATCT 58.867 61.111 0.00 0.00 0.00 2.75
3750 4013 2.663188 GCCATCTCCGCACCGATC 60.663 66.667 0.00 0.00 0.00 3.69
3751 4014 3.157252 AGCCATCTCCGCACCGAT 61.157 61.111 0.00 0.00 0.00 4.18
3752 4015 4.147449 CAGCCATCTCCGCACCGA 62.147 66.667 0.00 0.00 0.00 4.69
3754 4017 4.101448 ACCAGCCATCTCCGCACC 62.101 66.667 0.00 0.00 0.00 5.01
3755 4018 2.599645 ATCACCAGCCATCTCCGCAC 62.600 60.000 0.00 0.00 0.00 5.34
3756 4019 2.369633 ATCACCAGCCATCTCCGCA 61.370 57.895 0.00 0.00 0.00 5.69
3757 4020 1.890979 CATCACCAGCCATCTCCGC 60.891 63.158 0.00 0.00 0.00 5.54
3758 4021 0.249784 CTCATCACCAGCCATCTCCG 60.250 60.000 0.00 0.00 0.00 4.63
3759 4022 0.835941 ACTCATCACCAGCCATCTCC 59.164 55.000 0.00 0.00 0.00 3.71
3760 4023 1.209019 ACACTCATCACCAGCCATCTC 59.791 52.381 0.00 0.00 0.00 2.75
3761 4024 1.283347 ACACTCATCACCAGCCATCT 58.717 50.000 0.00 0.00 0.00 2.90
3762 4025 1.741706 CAACACTCATCACCAGCCATC 59.258 52.381 0.00 0.00 0.00 3.51
3763 4026 1.615116 CCAACACTCATCACCAGCCAT 60.615 52.381 0.00 0.00 0.00 4.40
3764 4027 0.250858 CCAACACTCATCACCAGCCA 60.251 55.000 0.00 0.00 0.00 4.75
3765 4028 0.962356 CCCAACACTCATCACCAGCC 60.962 60.000 0.00 0.00 0.00 4.85
3766 4029 0.962356 CCCCAACACTCATCACCAGC 60.962 60.000 0.00 0.00 0.00 4.85
3767 4030 0.692476 TCCCCAACACTCATCACCAG 59.308 55.000 0.00 0.00 0.00 4.00
3768 4031 1.144691 TTCCCCAACACTCATCACCA 58.855 50.000 0.00 0.00 0.00 4.17
3769 4032 1.534729 GTTCCCCAACACTCATCACC 58.465 55.000 0.00 0.00 32.14 4.02
3770 4033 1.156736 CGTTCCCCAACACTCATCAC 58.843 55.000 0.00 0.00 32.14 3.06
3771 4034 0.762418 ACGTTCCCCAACACTCATCA 59.238 50.000 0.00 0.00 32.14 3.07
3772 4035 2.754946 TACGTTCCCCAACACTCATC 57.245 50.000 0.00 0.00 32.14 2.92
3773 4036 3.713826 ATTACGTTCCCCAACACTCAT 57.286 42.857 0.00 0.00 32.14 2.90
3774 4037 4.620589 TTATTACGTTCCCCAACACTCA 57.379 40.909 0.00 0.00 32.14 3.41
3775 4038 6.149807 TGAAATTATTACGTTCCCCAACACTC 59.850 38.462 0.00 0.00 32.14 3.51
3776 4039 6.005198 TGAAATTATTACGTTCCCCAACACT 58.995 36.000 0.00 0.00 32.14 3.55
3777 4040 6.256912 TGAAATTATTACGTTCCCCAACAC 57.743 37.500 0.00 0.00 32.14 3.32
3778 4041 6.896021 TTGAAATTATTACGTTCCCCAACA 57.104 33.333 0.00 0.00 32.14 3.33
3779 4042 8.590719 TTTTTGAAATTATTACGTTCCCCAAC 57.409 30.769 0.00 0.00 0.00 3.77
3803 4066 2.325509 GCGTGTGCGTAGGAATTTTT 57.674 45.000 0.00 0.00 40.81 1.94
3815 4078 0.179181 CACCATGATCTTGCGTGTGC 60.179 55.000 15.81 0.00 43.20 4.57
3816 4079 1.441738 TCACCATGATCTTGCGTGTG 58.558 50.000 19.89 14.96 0.00 3.82
3817 4080 2.011947 CATCACCATGATCTTGCGTGT 58.988 47.619 19.89 6.63 34.28 4.49
3818 4081 1.268386 GCATCACCATGATCTTGCGTG 60.268 52.381 17.02 17.02 34.28 5.34
3819 4082 1.019673 GCATCACCATGATCTTGCGT 58.980 50.000 3.07 0.87 34.28 5.24
3820 4083 1.018910 TGCATCACCATGATCTTGCG 58.981 50.000 3.07 0.30 34.28 4.85
3821 4084 3.366070 GCTATGCATCACCATGATCTTGC 60.366 47.826 0.19 0.00 34.28 4.01
3822 4085 3.818773 TGCTATGCATCACCATGATCTTG 59.181 43.478 0.19 1.60 34.28 3.02
3823 4086 4.094830 TGCTATGCATCACCATGATCTT 57.905 40.909 0.19 0.00 34.28 2.40
3824 4087 3.782656 TGCTATGCATCACCATGATCT 57.217 42.857 0.19 0.00 34.28 2.75
3825 4088 3.364664 CGTTGCTATGCATCACCATGATC 60.365 47.826 0.19 0.00 38.76 2.92
3826 4089 2.551032 CGTTGCTATGCATCACCATGAT 59.449 45.455 0.19 0.00 38.76 2.45
3827 4090 1.941975 CGTTGCTATGCATCACCATGA 59.058 47.619 0.19 0.00 38.76 3.07
3828 4091 1.941975 TCGTTGCTATGCATCACCATG 59.058 47.619 0.19 0.00 38.76 3.66
3829 4092 2.158914 TCTCGTTGCTATGCATCACCAT 60.159 45.455 0.19 0.00 38.76 3.55
3830 4093 1.206849 TCTCGTTGCTATGCATCACCA 59.793 47.619 0.19 0.00 38.76 4.17
3831 4094 1.863454 CTCTCGTTGCTATGCATCACC 59.137 52.381 0.19 0.00 38.76 4.02
3832 4095 1.863454 CCTCTCGTTGCTATGCATCAC 59.137 52.381 0.19 0.00 38.76 3.06
3833 4096 1.202568 CCCTCTCGTTGCTATGCATCA 60.203 52.381 0.19 0.00 38.76 3.07
3834 4097 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
3835 4098 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
3836 4099 0.975556 TCCCCTCTCGTTGCTATGCA 60.976 55.000 0.00 0.00 36.47 3.96
3837 4100 0.249657 CTCCCCTCTCGTTGCTATGC 60.250 60.000 0.00 0.00 0.00 3.14
3838 4101 1.339610 CTCTCCCCTCTCGTTGCTATG 59.660 57.143 0.00 0.00 0.00 2.23
3839 4102 1.063567 ACTCTCCCCTCTCGTTGCTAT 60.064 52.381 0.00 0.00 0.00 2.97
3840 4103 0.331954 ACTCTCCCCTCTCGTTGCTA 59.668 55.000 0.00 0.00 0.00 3.49
3841 4104 1.077625 ACTCTCCCCTCTCGTTGCT 59.922 57.895 0.00 0.00 0.00 3.91
3842 4105 1.216710 CACTCTCCCCTCTCGTTGC 59.783 63.158 0.00 0.00 0.00 4.17
3843 4106 0.969894 AACACTCTCCCCTCTCGTTG 59.030 55.000 0.00 0.00 0.00 4.10
3844 4107 0.969894 CAACACTCTCCCCTCTCGTT 59.030 55.000 0.00 0.00 0.00 3.85
3845 4108 0.178958 ACAACACTCTCCCCTCTCGT 60.179 55.000 0.00 0.00 0.00 4.18
3846 4109 0.528470 GACAACACTCTCCCCTCTCG 59.472 60.000 0.00 0.00 0.00 4.04
3847 4110 0.899019 GGACAACACTCTCCCCTCTC 59.101 60.000 0.00 0.00 0.00 3.20
3848 4111 0.191064 TGGACAACACTCTCCCCTCT 59.809 55.000 0.00 0.00 0.00 3.69
3849 4112 0.321996 GTGGACAACACTCTCCCCTC 59.678 60.000 0.00 0.00 46.72 4.30
3850 4113 2.453242 GTGGACAACACTCTCCCCT 58.547 57.895 0.00 0.00 46.72 4.79
3858 4121 0.665369 CGAGGGTACGTGGACAACAC 60.665 60.000 0.00 0.00 46.78 3.32
3859 4122 1.108727 ACGAGGGTACGTGGACAACA 61.109 55.000 0.00 0.00 44.84 3.33
3860 4123 0.881118 TACGAGGGTACGTGGACAAC 59.119 55.000 0.00 0.00 46.02 3.32
3861 4124 1.167851 CTACGAGGGTACGTGGACAA 58.832 55.000 0.00 0.00 44.98 3.18
3862 4125 0.324614 TCTACGAGGGTACGTGGACA 59.675 55.000 0.00 0.00 45.53 4.02
3863 4126 3.159298 TCTACGAGGGTACGTGGAC 57.841 57.895 0.00 0.00 45.53 4.02
3865 4128 2.101700 GGTCTACGAGGGTACGTGG 58.898 63.158 0.00 0.00 46.02 4.94
3883 4146 1.065358 TTCTAACGCTTCCGCTTTCG 58.935 50.000 0.00 0.00 38.22 3.46
3884 4147 1.796459 TGTTCTAACGCTTCCGCTTTC 59.204 47.619 0.00 0.00 38.22 2.62
3885 4148 1.873698 TGTTCTAACGCTTCCGCTTT 58.126 45.000 0.00 0.00 38.22 3.51
3886 4149 1.529865 GTTGTTCTAACGCTTCCGCTT 59.470 47.619 0.00 0.00 38.22 4.68
3887 4150 1.145803 GTTGTTCTAACGCTTCCGCT 58.854 50.000 0.00 0.00 38.22 5.52
3888 4151 0.179258 CGTTGTTCTAACGCTTCCGC 60.179 55.000 0.00 0.00 36.82 5.54
3889 4152 3.921081 CGTTGTTCTAACGCTTCCG 57.079 52.632 0.00 0.00 36.82 4.30
3895 4158 3.338603 CAACCGCGTTGTTCTAACG 57.661 52.632 4.92 7.73 45.56 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.