Multiple sequence alignment - TraesCS3B01G300700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G300700 chr3B 100.000 3257 0 0 1 3257 482349811 482346555 0.000000e+00 6015.0
1 TraesCS3B01G300700 chr3B 88.652 282 22 1 489 760 482407169 482406888 5.210000e-88 335.0
2 TraesCS3B01G300700 chr3B 82.005 389 63 4 135 518 66367222 66366836 1.130000e-84 324.0
3 TraesCS3B01G300700 chr3A 93.145 2159 112 12 761 2896 492055826 492053681 0.000000e+00 3134.0
4 TraesCS3B01G300700 chr3A 93.956 364 17 1 2894 3257 492053646 492053288 2.210000e-151 545.0
5 TraesCS3B01G300700 chr3D 93.038 2169 82 20 761 2896 371151293 371149161 0.000000e+00 3105.0
6 TraesCS3B01G300700 chr3D 82.872 397 67 1 127 523 94021406 94021011 4.000000e-94 355.0
7 TraesCS3B01G300700 chr3D 85.514 214 20 6 2894 3106 371148608 371148405 2.550000e-51 213.0
8 TraesCS3B01G300700 chr3D 84.663 163 16 4 2894 3055 371149126 371148972 1.560000e-33 154.0
9 TraesCS3B01G300700 chr3D 81.707 164 19 5 2894 3055 371148867 371148713 3.410000e-25 126.0
10 TraesCS3B01G300700 chr7B 84.733 393 58 2 127 518 43547191 43547582 3.050000e-105 392.0
11 TraesCS3B01G300700 chr7B 84.783 92 10 4 1406 1495 28763998 28763909 4.480000e-14 89.8
12 TraesCS3B01G300700 chr7D 73.475 1131 204 63 1057 2169 81772880 81771828 4.030000e-89 339.0
13 TraesCS3B01G300700 chr7D 84.861 251 34 4 264 511 321977252 321977501 1.940000e-62 250.0
14 TraesCS3B01G300700 chr6D 81.955 399 69 2 127 523 12275370 12274973 5.210000e-88 335.0
15 TraesCS3B01G300700 chr7A 82.114 369 64 1 152 518 92470324 92470692 6.780000e-82 315.0
16 TraesCS3B01G300700 chr7A 81.868 364 56 5 155 518 92473990 92474343 6.830000e-77 298.0
17 TraesCS3B01G300700 chr7A 72.937 521 92 32 1397 1903 83733431 83732946 5.670000e-28 135.0
18 TraesCS3B01G300700 chr2D 93.750 128 8 0 633 760 463909832 463909705 3.320000e-45 193.0
19 TraesCS3B01G300700 chr2D 92.188 128 8 2 633 760 463884554 463884429 2.580000e-41 180.0
20 TraesCS3B01G300700 chr4A 84.444 180 26 2 341 518 277888392 277888213 3.340000e-40 176.0
21 TraesCS3B01G300700 chr4A 82.877 146 20 4 376 518 108709734 108709877 3.410000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G300700 chr3B 482346555 482349811 3256 True 6015.0 6015 100.0000 1 3257 1 chr3B.!!$R2 3256
1 TraesCS3B01G300700 chr3A 492053288 492055826 2538 True 1839.5 3134 93.5505 761 3257 2 chr3A.!!$R1 2496
2 TraesCS3B01G300700 chr3D 371148405 371151293 2888 True 899.5 3105 86.2305 761 3106 4 chr3D.!!$R2 2345
3 TraesCS3B01G300700 chr7D 81771828 81772880 1052 True 339.0 339 73.4750 1057 2169 1 chr7D.!!$R1 1112
4 TraesCS3B01G300700 chr7A 92470324 92474343 4019 False 306.5 315 81.9910 152 518 2 chr7A.!!$F1 366

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
293 3806 0.034896 AACGCCGTCTCCATGAACTT 59.965 50.0 0.0 0.0 0.0 2.66 F
673 4186 0.036388 TGTTCGTGGCATCTTCTCCC 60.036 55.0 0.0 0.0 0.0 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2224 5748 0.913924 TCATCATCTGGAGCAGGCAA 59.086 50.000 0.00 0.0 31.51 4.52 R
2442 5967 4.444056 CCAACAAAATTTGTAAGCACCGAG 59.556 41.667 12.11 0.0 44.59 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.688136 CGGGAACACGCGTAGATG 58.312 61.111 13.44 1.07 35.74 2.90
23 24 1.153901 CGGGAACACGCGTAGATGT 60.154 57.895 13.44 1.90 35.74 3.06
24 25 0.734942 CGGGAACACGCGTAGATGTT 60.735 55.000 13.44 12.57 41.70 2.71
25 26 0.719465 GGGAACACGCGTAGATGTTG 59.281 55.000 13.44 0.00 39.13 3.33
26 27 1.425412 GGAACACGCGTAGATGTTGT 58.575 50.000 13.44 0.00 39.13 3.32
27 28 1.389106 GGAACACGCGTAGATGTTGTC 59.611 52.381 13.44 0.81 39.13 3.18
28 29 1.057285 GAACACGCGTAGATGTTGTCG 59.943 52.381 13.44 0.00 39.13 4.35
29 30 0.039798 ACACGCGTAGATGTTGTCGT 60.040 50.000 13.44 0.00 0.00 4.34
31 32 0.039798 ACGCGTAGATGTTGTCGTGT 60.040 50.000 11.67 0.00 41.09 4.49
32 33 0.362179 CGCGTAGATGTTGTCGTGTG 59.638 55.000 0.00 0.00 0.00 3.82
33 34 0.093026 GCGTAGATGTTGTCGTGTGC 59.907 55.000 0.00 0.00 0.00 4.57
34 35 0.362179 CGTAGATGTTGTCGTGTGCG 59.638 55.000 0.00 0.00 39.92 5.34
35 36 0.093026 GTAGATGTTGTCGTGTGCGC 59.907 55.000 0.00 0.00 38.14 6.09
37 38 2.653967 GATGTTGTCGTGTGCGCGA 61.654 57.895 12.10 3.58 38.68 5.87
38 39 1.955529 GATGTTGTCGTGTGCGCGAT 61.956 55.000 12.10 0.00 43.07 4.58
39 40 1.565156 ATGTTGTCGTGTGCGCGATT 61.565 50.000 12.10 0.00 43.07 3.34
42 43 3.109547 GTCGTGTGCGCGATTGGA 61.110 61.111 12.10 0.00 43.07 3.53
43 44 2.809174 TCGTGTGCGCGATTGGAG 60.809 61.111 12.10 0.00 35.83 3.86
44 45 4.505217 CGTGTGCGCGATTGGAGC 62.505 66.667 12.10 0.00 42.40 4.70
53 54 4.814294 GATTGGAGCGGCGGTCGT 62.814 66.667 29.68 19.31 41.72 4.34
73 74 4.704833 CTGGCGTGGGGGTGTCTG 62.705 72.222 0.00 0.00 0.00 3.51
75 76 3.315949 GGCGTGGGGGTGTCTGTA 61.316 66.667 0.00 0.00 0.00 2.74
76 77 2.264794 GCGTGGGGGTGTCTGTAG 59.735 66.667 0.00 0.00 0.00 2.74
77 78 2.264794 CGTGGGGGTGTCTGTAGC 59.735 66.667 0.00 0.00 0.00 3.58
80 81 3.001406 GGGGGTGTCTGTAGCCGT 61.001 66.667 0.00 0.00 39.11 5.68
81 82 2.577593 GGGGTGTCTGTAGCCGTC 59.422 66.667 0.00 0.00 39.11 4.79
83 84 2.506438 GGTGTCTGTAGCCGTCGC 60.506 66.667 0.00 0.00 0.00 5.19
84 85 2.506438 GTGTCTGTAGCCGTCGCC 60.506 66.667 0.00 0.00 34.57 5.54
85 86 4.111016 TGTCTGTAGCCGTCGCCG 62.111 66.667 0.00 0.00 34.57 6.46
88 89 4.796231 CTGTAGCCGTCGCCGCTT 62.796 66.667 1.26 0.00 34.57 4.68
110 111 4.021925 GGAGGCCGCAGTCCAACT 62.022 66.667 9.31 0.00 32.55 3.16
113 114 4.643387 GGCCGCAGTCCAACTGGT 62.643 66.667 9.01 0.00 46.01 4.00
114 115 3.357079 GCCGCAGTCCAACTGGTG 61.357 66.667 9.01 0.00 46.01 4.17
144 145 4.147449 CCGCGCAGGACAGATGGA 62.147 66.667 8.75 0.00 45.00 3.41
145 146 2.125552 CGCGCAGGACAGATGGAA 60.126 61.111 8.75 0.00 0.00 3.53
146 147 1.741401 CGCGCAGGACAGATGGAAA 60.741 57.895 8.75 0.00 0.00 3.13
147 148 1.796796 GCGCAGGACAGATGGAAAC 59.203 57.895 0.30 0.00 0.00 2.78
150 151 1.970917 GCAGGACAGATGGAAACGCG 61.971 60.000 3.53 3.53 0.00 6.01
151 152 1.079127 AGGACAGATGGAAACGCGG 60.079 57.895 12.47 0.00 0.00 6.46
153 154 2.746277 ACAGATGGAAACGCGGCC 60.746 61.111 12.47 9.70 0.00 6.13
154 155 3.864686 CAGATGGAAACGCGGCCG 61.865 66.667 24.05 24.05 41.14 6.13
155 156 4.077184 AGATGGAAACGCGGCCGA 62.077 61.111 33.48 5.99 38.29 5.54
156 157 3.122323 GATGGAAACGCGGCCGAA 61.122 61.111 33.48 4.39 38.29 4.30
218 3731 4.041917 GGTGCCGTCGTCCGTACA 62.042 66.667 0.00 0.00 33.66 2.90
226 3739 0.595095 GTCGTCCGTACACACCTTCT 59.405 55.000 0.00 0.00 0.00 2.85
227 3740 0.594602 TCGTCCGTACACACCTTCTG 59.405 55.000 0.00 0.00 0.00 3.02
245 3758 2.738904 GCGAAGGCGGCCTATAGC 60.739 66.667 24.16 22.56 42.60 2.97
287 3800 4.814294 GCCGAACGCCGTCTCCAT 62.814 66.667 0.00 0.00 36.31 3.41
288 3801 2.885644 CCGAACGCCGTCTCCATG 60.886 66.667 0.00 0.00 36.31 3.66
289 3802 2.180769 CGAACGCCGTCTCCATGA 59.819 61.111 0.00 0.00 0.00 3.07
290 3803 1.445410 CGAACGCCGTCTCCATGAA 60.445 57.895 0.00 0.00 0.00 2.57
291 3804 1.683790 CGAACGCCGTCTCCATGAAC 61.684 60.000 0.00 0.00 0.00 3.18
292 3805 0.389948 GAACGCCGTCTCCATGAACT 60.390 55.000 0.00 0.00 0.00 3.01
293 3806 0.034896 AACGCCGTCTCCATGAACTT 59.965 50.000 0.00 0.00 0.00 2.66
294 3807 0.389948 ACGCCGTCTCCATGAACTTC 60.390 55.000 0.00 0.00 0.00 3.01
295 3808 0.108615 CGCCGTCTCCATGAACTTCT 60.109 55.000 0.00 0.00 0.00 2.85
296 3809 1.646189 GCCGTCTCCATGAACTTCTC 58.354 55.000 0.00 0.00 0.00 2.87
297 3810 1.740718 GCCGTCTCCATGAACTTCTCC 60.741 57.143 0.00 0.00 0.00 3.71
298 3811 1.550524 CCGTCTCCATGAACTTCTCCA 59.449 52.381 0.00 0.00 0.00 3.86
299 3812 2.417924 CCGTCTCCATGAACTTCTCCAG 60.418 54.545 0.00 0.00 0.00 3.86
300 3813 2.626840 GTCTCCATGAACTTCTCCAGC 58.373 52.381 0.00 0.00 0.00 4.85
301 3814 1.556911 TCTCCATGAACTTCTCCAGCC 59.443 52.381 0.00 0.00 0.00 4.85
302 3815 1.558756 CTCCATGAACTTCTCCAGCCT 59.441 52.381 0.00 0.00 0.00 4.58
303 3816 1.556911 TCCATGAACTTCTCCAGCCTC 59.443 52.381 0.00 0.00 0.00 4.70
304 3817 1.649664 CATGAACTTCTCCAGCCTCG 58.350 55.000 0.00 0.00 0.00 4.63
305 3818 0.107945 ATGAACTTCTCCAGCCTCGC 60.108 55.000 0.00 0.00 0.00 5.03
306 3819 1.448717 GAACTTCTCCAGCCTCGCC 60.449 63.158 0.00 0.00 0.00 5.54
307 3820 1.893919 GAACTTCTCCAGCCTCGCCT 61.894 60.000 0.00 0.00 0.00 5.52
308 3821 1.484444 AACTTCTCCAGCCTCGCCTT 61.484 55.000 0.00 0.00 0.00 4.35
309 3822 1.449246 CTTCTCCAGCCTCGCCTTG 60.449 63.158 0.00 0.00 0.00 3.61
310 3823 2.866085 CTTCTCCAGCCTCGCCTTGG 62.866 65.000 0.00 0.00 0.00 3.61
311 3824 3.393970 CTCCAGCCTCGCCTTGGA 61.394 66.667 0.00 0.00 38.62 3.53
312 3825 3.393970 TCCAGCCTCGCCTTGGAG 61.394 66.667 0.00 0.00 36.13 3.86
322 3835 3.431725 CCTTGGAGGCGGCGAAAC 61.432 66.667 12.98 0.00 0.00 2.78
323 3836 2.358737 CTTGGAGGCGGCGAAACT 60.359 61.111 12.98 4.70 0.00 2.66
324 3837 1.966451 CTTGGAGGCGGCGAAACTT 60.966 57.895 12.98 0.00 0.00 2.66
325 3838 1.912371 CTTGGAGGCGGCGAAACTTC 61.912 60.000 12.98 4.36 0.00 3.01
337 3850 2.315901 CGAAACTTCGGTCCAAATTGC 58.684 47.619 3.91 0.00 46.30 3.56
338 3851 2.315901 GAAACTTCGGTCCAAATTGCG 58.684 47.619 0.00 0.00 0.00 4.85
339 3852 1.600023 AACTTCGGTCCAAATTGCGA 58.400 45.000 0.00 0.00 0.00 5.10
340 3853 1.156736 ACTTCGGTCCAAATTGCGAG 58.843 50.000 0.00 0.00 0.00 5.03
341 3854 0.179189 CTTCGGTCCAAATTGCGAGC 60.179 55.000 0.00 4.38 0.00 5.03
342 3855 0.605319 TTCGGTCCAAATTGCGAGCT 60.605 50.000 10.31 0.00 0.00 4.09
343 3856 0.248012 TCGGTCCAAATTGCGAGCTA 59.752 50.000 10.31 0.00 0.00 3.32
344 3857 0.652592 CGGTCCAAATTGCGAGCTAG 59.347 55.000 10.31 0.00 0.00 3.42
345 3858 0.378610 GGTCCAAATTGCGAGCTAGC 59.621 55.000 12.40 12.40 37.71 3.42
346 3859 1.373570 GTCCAAATTGCGAGCTAGCT 58.626 50.000 19.45 19.45 38.13 3.32
347 3860 1.063174 GTCCAAATTGCGAGCTAGCTG 59.937 52.381 24.99 15.40 38.13 4.24
348 3861 0.379669 CCAAATTGCGAGCTAGCTGG 59.620 55.000 24.99 22.92 38.13 4.85
349 3862 0.379669 CAAATTGCGAGCTAGCTGGG 59.620 55.000 24.99 14.96 38.13 4.45
350 3863 1.379642 AAATTGCGAGCTAGCTGGGC 61.380 55.000 24.99 24.26 38.13 5.36
351 3864 3.764160 ATTGCGAGCTAGCTGGGCC 62.764 63.158 24.99 9.70 38.13 5.80
353 3866 4.168291 GCGAGCTAGCTGGGCCTT 62.168 66.667 24.99 0.00 0.00 4.35
354 3867 2.107953 CGAGCTAGCTGGGCCTTC 59.892 66.667 24.99 4.75 0.00 3.46
355 3868 2.725312 CGAGCTAGCTGGGCCTTCA 61.725 63.158 24.99 0.00 0.00 3.02
356 3869 1.145819 GAGCTAGCTGGGCCTTCAG 59.854 63.158 24.99 3.20 37.79 3.02
357 3870 1.306482 AGCTAGCTGGGCCTTCAGA 60.306 57.895 18.57 0.00 36.93 3.27
358 3871 0.911525 AGCTAGCTGGGCCTTCAGAA 60.912 55.000 18.57 0.00 36.93 3.02
359 3872 0.746204 GCTAGCTGGGCCTTCAGAAC 60.746 60.000 12.73 0.00 36.93 3.01
360 3873 0.107459 CTAGCTGGGCCTTCAGAACC 60.107 60.000 12.73 0.00 36.93 3.62
361 3874 0.547712 TAGCTGGGCCTTCAGAACCT 60.548 55.000 12.73 3.61 36.93 3.50
362 3875 1.377856 GCTGGGCCTTCAGAACCTC 60.378 63.158 12.73 0.00 36.93 3.85
363 3876 2.069776 CTGGGCCTTCAGAACCTCA 58.930 57.895 4.53 0.00 36.93 3.86
364 3877 0.622665 CTGGGCCTTCAGAACCTCAT 59.377 55.000 4.53 0.00 36.93 2.90
365 3878 1.839994 CTGGGCCTTCAGAACCTCATA 59.160 52.381 4.53 0.00 36.93 2.15
366 3879 1.559682 TGGGCCTTCAGAACCTCATAC 59.440 52.381 4.53 0.00 0.00 2.39
367 3880 1.473434 GGGCCTTCAGAACCTCATACG 60.473 57.143 0.84 0.00 0.00 3.06
368 3881 1.207329 GGCCTTCAGAACCTCATACGT 59.793 52.381 0.00 0.00 0.00 3.57
369 3882 2.541556 GCCTTCAGAACCTCATACGTC 58.458 52.381 0.00 0.00 0.00 4.34
370 3883 2.798680 CCTTCAGAACCTCATACGTCG 58.201 52.381 0.00 0.00 0.00 5.12
371 3884 2.422479 CCTTCAGAACCTCATACGTCGA 59.578 50.000 0.00 0.00 0.00 4.20
372 3885 3.427243 CTTCAGAACCTCATACGTCGAC 58.573 50.000 5.18 5.18 0.00 4.20
373 3886 2.429478 TCAGAACCTCATACGTCGACA 58.571 47.619 17.16 0.00 0.00 4.35
374 3887 2.815503 TCAGAACCTCATACGTCGACAA 59.184 45.455 17.16 2.88 0.00 3.18
375 3888 3.253921 TCAGAACCTCATACGTCGACAAA 59.746 43.478 17.16 2.46 0.00 2.83
376 3889 3.364023 CAGAACCTCATACGTCGACAAAC 59.636 47.826 17.16 0.00 0.00 2.93
377 3890 2.358939 ACCTCATACGTCGACAAACC 57.641 50.000 17.16 0.00 0.00 3.27
378 3891 1.067354 ACCTCATACGTCGACAAACCC 60.067 52.381 17.16 0.00 0.00 4.11
379 3892 1.203994 CCTCATACGTCGACAAACCCT 59.796 52.381 17.16 0.00 0.00 4.34
380 3893 2.527100 CTCATACGTCGACAAACCCTC 58.473 52.381 17.16 0.00 0.00 4.30
381 3894 1.203052 TCATACGTCGACAAACCCTCC 59.797 52.381 17.16 0.00 0.00 4.30
382 3895 0.171903 ATACGTCGACAAACCCTCCG 59.828 55.000 17.16 0.08 0.00 4.63
383 3896 1.865788 TACGTCGACAAACCCTCCGG 61.866 60.000 17.16 0.00 0.00 5.14
384 3897 2.741211 GTCGACAAACCCTCCGGC 60.741 66.667 11.55 0.00 0.00 6.13
385 3898 2.920912 TCGACAAACCCTCCGGCT 60.921 61.111 0.00 0.00 0.00 5.52
386 3899 1.607178 TCGACAAACCCTCCGGCTA 60.607 57.895 0.00 0.00 0.00 3.93
387 3900 1.153628 CGACAAACCCTCCGGCTAG 60.154 63.158 0.00 0.00 0.00 3.42
388 3901 1.601419 CGACAAACCCTCCGGCTAGA 61.601 60.000 0.00 0.00 0.00 2.43
389 3902 0.175989 GACAAACCCTCCGGCTAGAG 59.824 60.000 0.00 0.00 0.00 2.43
399 3912 3.541713 GGCTAGAGGGCCGTCAGG 61.542 72.222 26.40 18.25 42.82 3.86
400 3913 2.442272 GCTAGAGGGCCGTCAGGA 60.442 66.667 26.40 10.83 41.02 3.86
401 3914 2.494530 GCTAGAGGGCCGTCAGGAG 61.495 68.421 26.40 19.61 41.02 3.69
402 3915 2.442272 TAGAGGGCCGTCAGGAGC 60.442 66.667 26.40 0.00 41.02 4.70
403 3916 2.920076 CTAGAGGGCCGTCAGGAGCT 62.920 65.000 26.40 7.96 41.02 4.09
404 3917 2.912987 TAGAGGGCCGTCAGGAGCTC 62.913 65.000 26.40 4.71 41.02 4.09
426 3939 3.853330 CGCCGTCGCAAGTCCATG 61.853 66.667 0.00 0.00 39.48 3.66
427 3940 3.499737 GCCGTCGCAAGTCCATGG 61.500 66.667 4.97 4.97 39.48 3.66
428 3941 2.264480 CCGTCGCAAGTCCATGGA 59.736 61.111 11.44 11.44 39.48 3.41
429 3942 1.375396 CCGTCGCAAGTCCATGGAA 60.375 57.895 18.20 0.00 39.48 3.53
430 3943 0.744414 CCGTCGCAAGTCCATGGAAT 60.744 55.000 18.20 13.77 39.48 3.01
431 3944 1.086696 CGTCGCAAGTCCATGGAATT 58.913 50.000 21.43 21.43 39.48 2.17
439 3952 4.335735 AAGTCCATGGAATTGATTGGGA 57.664 40.909 25.81 0.00 30.90 4.37
440 3953 4.335735 AGTCCATGGAATTGATTGGGAA 57.664 40.909 18.20 0.00 0.00 3.97
441 3954 4.686891 AGTCCATGGAATTGATTGGGAAA 58.313 39.130 18.20 0.00 0.00 3.13
442 3955 5.092968 AGTCCATGGAATTGATTGGGAAAA 58.907 37.500 18.20 0.00 0.00 2.29
443 3956 5.547276 AGTCCATGGAATTGATTGGGAAAAA 59.453 36.000 18.20 0.00 0.00 1.94
464 3977 6.956202 AAAATTTGATGGATTTTTGGTGCA 57.044 29.167 0.00 0.00 34.05 4.57
465 3978 7.527568 AAAATTTGATGGATTTTTGGTGCAT 57.472 28.000 0.00 0.00 34.05 3.96
466 3979 6.503589 AATTTGATGGATTTTTGGTGCATG 57.496 33.333 0.00 0.00 0.00 4.06
467 3980 4.886496 TTGATGGATTTTTGGTGCATGA 57.114 36.364 0.00 0.00 0.00 3.07
468 3981 5.423704 TTGATGGATTTTTGGTGCATGAT 57.576 34.783 0.00 0.00 0.00 2.45
469 3982 5.013568 TGATGGATTTTTGGTGCATGATC 57.986 39.130 0.00 0.00 0.00 2.92
470 3983 4.466726 TGATGGATTTTTGGTGCATGATCA 59.533 37.500 0.00 0.00 0.00 2.92
471 3984 4.886496 TGGATTTTTGGTGCATGATCAA 57.114 36.364 0.00 0.00 0.00 2.57
472 3985 5.224821 TGGATTTTTGGTGCATGATCAAA 57.775 34.783 0.00 0.55 32.52 2.69
473 3986 4.996122 TGGATTTTTGGTGCATGATCAAAC 59.004 37.500 0.00 0.00 34.23 2.93
474 3987 4.091800 GGATTTTTGGTGCATGATCAAACG 59.908 41.667 0.00 0.00 34.23 3.60
475 3988 3.724508 TTTTGGTGCATGATCAAACGT 57.275 38.095 0.00 0.00 34.23 3.99
476 3989 2.987413 TTGGTGCATGATCAAACGTC 57.013 45.000 0.00 0.00 0.00 4.34
477 3990 2.183478 TGGTGCATGATCAAACGTCT 57.817 45.000 0.00 0.00 0.00 4.18
478 3991 2.076100 TGGTGCATGATCAAACGTCTC 58.924 47.619 0.00 0.00 0.00 3.36
479 3992 2.289631 TGGTGCATGATCAAACGTCTCT 60.290 45.455 0.00 0.00 0.00 3.10
480 3993 2.094894 GGTGCATGATCAAACGTCTCTG 59.905 50.000 0.00 0.00 0.00 3.35
481 3994 2.995939 GTGCATGATCAAACGTCTCTGA 59.004 45.455 0.00 0.00 0.00 3.27
482 3995 3.620374 GTGCATGATCAAACGTCTCTGAT 59.380 43.478 0.00 7.29 34.96 2.90
483 3996 3.619929 TGCATGATCAAACGTCTCTGATG 59.380 43.478 11.26 1.89 32.40 3.07
484 3997 3.545624 GCATGATCAAACGTCTCTGATGC 60.546 47.826 11.26 7.35 32.40 3.91
485 3998 2.621338 TGATCAAACGTCTCTGATGCC 58.379 47.619 11.26 1.47 32.40 4.40
486 3999 2.028203 TGATCAAACGTCTCTGATGCCA 60.028 45.455 11.26 3.57 32.40 4.92
487 4000 2.542020 TCAAACGTCTCTGATGCCAA 57.458 45.000 0.00 0.00 0.00 4.52
488 4001 3.057969 TCAAACGTCTCTGATGCCAAT 57.942 42.857 0.00 0.00 0.00 3.16
489 4002 3.411446 TCAAACGTCTCTGATGCCAATT 58.589 40.909 0.00 0.00 0.00 2.32
490 4003 3.189080 TCAAACGTCTCTGATGCCAATTG 59.811 43.478 0.00 0.00 0.00 2.32
491 4004 2.479566 ACGTCTCTGATGCCAATTGT 57.520 45.000 4.43 0.00 0.00 2.71
492 4005 2.079158 ACGTCTCTGATGCCAATTGTG 58.921 47.619 4.43 0.00 0.00 3.33
493 4006 2.289631 ACGTCTCTGATGCCAATTGTGA 60.290 45.455 4.43 0.00 0.00 3.58
494 4007 2.350804 CGTCTCTGATGCCAATTGTGAG 59.649 50.000 4.43 2.82 0.00 3.51
495 4008 2.681848 GTCTCTGATGCCAATTGTGAGG 59.318 50.000 4.43 0.00 0.00 3.86
496 4009 2.573009 TCTCTGATGCCAATTGTGAGGA 59.427 45.455 4.43 0.00 0.00 3.71
497 4010 3.201487 TCTCTGATGCCAATTGTGAGGAT 59.799 43.478 4.43 0.00 0.00 3.24
498 4011 3.548770 TCTGATGCCAATTGTGAGGATC 58.451 45.455 4.43 6.26 0.00 3.36
499 4012 3.201487 TCTGATGCCAATTGTGAGGATCT 59.799 43.478 13.14 0.00 34.92 2.75
500 4013 3.952323 CTGATGCCAATTGTGAGGATCTT 59.048 43.478 13.14 0.00 34.92 2.40
501 4014 5.104402 TCTGATGCCAATTGTGAGGATCTTA 60.104 40.000 13.14 2.69 34.92 2.10
502 4015 4.883585 TGATGCCAATTGTGAGGATCTTAC 59.116 41.667 13.14 0.00 34.92 2.34
503 4016 4.574674 TGCCAATTGTGAGGATCTTACT 57.425 40.909 4.43 0.00 34.92 2.24
504 4017 5.692115 TGCCAATTGTGAGGATCTTACTA 57.308 39.130 4.43 0.00 34.92 1.82
505 4018 5.428253 TGCCAATTGTGAGGATCTTACTAC 58.572 41.667 4.43 0.00 34.92 2.73
506 4019 5.189736 TGCCAATTGTGAGGATCTTACTACT 59.810 40.000 4.43 0.00 34.92 2.57
507 4020 6.382859 TGCCAATTGTGAGGATCTTACTACTA 59.617 38.462 4.43 0.00 34.92 1.82
508 4021 7.093068 TGCCAATTGTGAGGATCTTACTACTAA 60.093 37.037 4.43 0.00 34.92 2.24
509 4022 7.934120 GCCAATTGTGAGGATCTTACTACTAAT 59.066 37.037 4.43 0.00 34.92 1.73
510 4023 9.838339 CCAATTGTGAGGATCTTACTACTAATT 57.162 33.333 4.43 0.00 34.92 1.40
527 4040 9.593134 ACTACTAATTCATTCAACTTAGAGCAG 57.407 33.333 0.00 0.00 0.00 4.24
528 4041 9.593134 CTACTAATTCATTCAACTTAGAGCAGT 57.407 33.333 0.00 0.00 0.00 4.40
530 4043 9.372369 ACTAATTCATTCAACTTAGAGCAGTAC 57.628 33.333 0.00 0.00 0.00 2.73
531 4044 9.371136 CTAATTCATTCAACTTAGAGCAGTACA 57.629 33.333 0.00 0.00 0.00 2.90
532 4045 7.602517 ATTCATTCAACTTAGAGCAGTACAC 57.397 36.000 0.00 0.00 0.00 2.90
533 4046 6.346477 TCATTCAACTTAGAGCAGTACACT 57.654 37.500 0.00 0.00 0.00 3.55
534 4047 6.390721 TCATTCAACTTAGAGCAGTACACTC 58.609 40.000 7.63 7.63 0.00 3.51
535 4048 4.421033 TCAACTTAGAGCAGTACACTCG 57.579 45.455 9.50 0.77 39.23 4.18
536 4049 4.070009 TCAACTTAGAGCAGTACACTCGA 58.930 43.478 9.50 3.17 39.23 4.04
537 4050 4.517832 TCAACTTAGAGCAGTACACTCGAA 59.482 41.667 9.50 9.68 39.23 3.71
538 4051 5.183331 TCAACTTAGAGCAGTACACTCGAAT 59.817 40.000 10.42 0.00 39.23 3.34
539 4052 5.646577 ACTTAGAGCAGTACACTCGAATT 57.353 39.130 10.42 4.65 39.23 2.17
540 4053 6.754702 ACTTAGAGCAGTACACTCGAATTA 57.245 37.500 10.42 0.00 39.23 1.40
541 4054 6.553524 ACTTAGAGCAGTACACTCGAATTAC 58.446 40.000 10.42 0.00 39.23 1.89
542 4055 6.150641 ACTTAGAGCAGTACACTCGAATTACA 59.849 38.462 10.42 0.00 39.23 2.41
543 4056 4.987832 AGAGCAGTACACTCGAATTACAG 58.012 43.478 9.50 0.00 39.23 2.74
544 4057 4.700692 AGAGCAGTACACTCGAATTACAGA 59.299 41.667 9.50 0.00 39.23 3.41
545 4058 5.183331 AGAGCAGTACACTCGAATTACAGAA 59.817 40.000 9.50 0.00 39.23 3.02
546 4059 5.403246 AGCAGTACACTCGAATTACAGAAG 58.597 41.667 0.00 0.00 0.00 2.85
547 4060 4.563184 GCAGTACACTCGAATTACAGAAGG 59.437 45.833 0.00 0.00 0.00 3.46
548 4061 5.621555 GCAGTACACTCGAATTACAGAAGGA 60.622 44.000 0.00 0.00 0.00 3.36
549 4062 6.565234 CAGTACACTCGAATTACAGAAGGAT 58.435 40.000 0.00 0.00 0.00 3.24
550 4063 7.036220 CAGTACACTCGAATTACAGAAGGATT 58.964 38.462 0.00 0.00 0.00 3.01
551 4064 7.009631 CAGTACACTCGAATTACAGAAGGATTG 59.990 40.741 0.00 0.00 0.00 2.67
552 4065 6.037786 ACACTCGAATTACAGAAGGATTGA 57.962 37.500 0.00 0.00 0.00 2.57
553 4066 6.464222 ACACTCGAATTACAGAAGGATTGAA 58.536 36.000 0.00 0.00 0.00 2.69
554 4067 6.591834 ACACTCGAATTACAGAAGGATTGAAG 59.408 38.462 0.00 0.00 0.00 3.02
555 4068 5.582665 ACTCGAATTACAGAAGGATTGAAGC 59.417 40.000 0.00 0.00 0.00 3.86
556 4069 5.734720 TCGAATTACAGAAGGATTGAAGCT 58.265 37.500 0.00 0.00 0.00 3.74
557 4070 6.173339 TCGAATTACAGAAGGATTGAAGCTT 58.827 36.000 0.00 0.00 0.00 3.74
558 4071 7.327975 TCGAATTACAGAAGGATTGAAGCTTA 58.672 34.615 0.00 0.00 0.00 3.09
559 4072 7.277981 TCGAATTACAGAAGGATTGAAGCTTAC 59.722 37.037 0.00 0.00 0.00 2.34
560 4073 7.466050 CGAATTACAGAAGGATTGAAGCTTACC 60.466 40.741 0.00 0.96 0.00 2.85
561 4074 4.640771 ACAGAAGGATTGAAGCTTACCA 57.359 40.909 0.00 0.00 0.00 3.25
562 4075 4.985538 ACAGAAGGATTGAAGCTTACCAA 58.014 39.130 0.00 0.11 0.00 3.67
563 4076 5.574188 ACAGAAGGATTGAAGCTTACCAAT 58.426 37.500 11.95 11.95 35.87 3.16
564 4077 5.416952 ACAGAAGGATTGAAGCTTACCAATG 59.583 40.000 15.86 6.71 33.57 2.82
565 4078 5.649395 CAGAAGGATTGAAGCTTACCAATGA 59.351 40.000 15.86 0.00 33.57 2.57
566 4079 6.151648 CAGAAGGATTGAAGCTTACCAATGAA 59.848 38.462 15.86 0.00 33.57 2.57
567 4080 6.376581 AGAAGGATTGAAGCTTACCAATGAAG 59.623 38.462 15.86 0.00 33.57 3.02
568 4081 5.819991 AGGATTGAAGCTTACCAATGAAGA 58.180 37.500 15.86 0.00 33.57 2.87
569 4082 6.248433 AGGATTGAAGCTTACCAATGAAGAA 58.752 36.000 15.86 0.00 33.57 2.52
570 4083 6.894103 AGGATTGAAGCTTACCAATGAAGAAT 59.106 34.615 15.86 0.00 33.57 2.40
571 4084 7.398332 AGGATTGAAGCTTACCAATGAAGAATT 59.602 33.333 15.86 0.00 33.57 2.17
572 4085 8.037166 GGATTGAAGCTTACCAATGAAGAATTT 58.963 33.333 15.86 0.00 33.57 1.82
573 4086 8.767478 ATTGAAGCTTACCAATGAAGAATTTG 57.233 30.769 11.47 0.00 32.34 2.32
574 4087 7.523293 TGAAGCTTACCAATGAAGAATTTGA 57.477 32.000 0.00 0.00 0.00 2.69
575 4088 7.596494 TGAAGCTTACCAATGAAGAATTTGAG 58.404 34.615 0.00 0.00 0.00 3.02
576 4089 7.448161 TGAAGCTTACCAATGAAGAATTTGAGA 59.552 33.333 0.00 0.00 0.00 3.27
577 4090 7.388460 AGCTTACCAATGAAGAATTTGAGAG 57.612 36.000 0.00 0.00 0.00 3.20
578 4091 6.376581 AGCTTACCAATGAAGAATTTGAGAGG 59.623 38.462 0.00 0.00 0.00 3.69
579 4092 6.375455 GCTTACCAATGAAGAATTTGAGAGGA 59.625 38.462 0.00 0.00 0.00 3.71
580 4093 7.094205 GCTTACCAATGAAGAATTTGAGAGGAA 60.094 37.037 0.00 0.00 0.00 3.36
581 4094 6.830873 ACCAATGAAGAATTTGAGAGGAAG 57.169 37.500 0.00 0.00 0.00 3.46
582 4095 6.546484 ACCAATGAAGAATTTGAGAGGAAGA 58.454 36.000 0.00 0.00 0.00 2.87
583 4096 7.006509 ACCAATGAAGAATTTGAGAGGAAGAA 58.993 34.615 0.00 0.00 0.00 2.52
584 4097 7.176340 ACCAATGAAGAATTTGAGAGGAAGAAG 59.824 37.037 0.00 0.00 0.00 2.85
585 4098 7.392673 CCAATGAAGAATTTGAGAGGAAGAAGA 59.607 37.037 0.00 0.00 0.00 2.87
586 4099 8.790718 CAATGAAGAATTTGAGAGGAAGAAGAA 58.209 33.333 0.00 0.00 0.00 2.52
587 4100 7.976135 TGAAGAATTTGAGAGGAAGAAGAAG 57.024 36.000 0.00 0.00 0.00 2.85
588 4101 7.739825 TGAAGAATTTGAGAGGAAGAAGAAGA 58.260 34.615 0.00 0.00 0.00 2.87
589 4102 8.213679 TGAAGAATTTGAGAGGAAGAAGAAGAA 58.786 33.333 0.00 0.00 0.00 2.52
590 4103 8.620116 AAGAATTTGAGAGGAAGAAGAAGAAG 57.380 34.615 0.00 0.00 0.00 2.85
591 4104 7.972301 AGAATTTGAGAGGAAGAAGAAGAAGA 58.028 34.615 0.00 0.00 0.00 2.87
592 4105 8.096414 AGAATTTGAGAGGAAGAAGAAGAAGAG 58.904 37.037 0.00 0.00 0.00 2.85
593 4106 4.799564 TGAGAGGAAGAAGAAGAAGAGC 57.200 45.455 0.00 0.00 0.00 4.09
594 4107 4.415596 TGAGAGGAAGAAGAAGAAGAGCT 58.584 43.478 0.00 0.00 0.00 4.09
595 4108 4.837860 TGAGAGGAAGAAGAAGAAGAGCTT 59.162 41.667 0.00 0.00 40.25 3.74
596 4109 6.013379 TGAGAGGAAGAAGAAGAAGAGCTTA 58.987 40.000 0.00 0.00 36.83 3.09
597 4110 6.495181 TGAGAGGAAGAAGAAGAAGAGCTTAA 59.505 38.462 0.00 0.00 36.83 1.85
598 4111 6.935167 AGAGGAAGAAGAAGAAGAGCTTAAG 58.065 40.000 0.00 0.00 36.83 1.85
599 4112 5.487433 AGGAAGAAGAAGAAGAGCTTAAGC 58.513 41.667 20.09 20.09 36.83 3.09
600 4113 4.634004 GGAAGAAGAAGAAGAGCTTAAGCC 59.366 45.833 23.71 14.86 43.38 4.35
601 4114 3.855858 AGAAGAAGAAGAGCTTAAGCCG 58.144 45.455 23.71 0.00 43.38 5.52
602 4115 3.511934 AGAAGAAGAAGAGCTTAAGCCGA 59.488 43.478 23.71 0.00 43.38 5.54
603 4116 3.518634 AGAAGAAGAGCTTAAGCCGAG 57.481 47.619 23.71 0.00 43.38 4.63
604 4117 2.167487 AGAAGAAGAGCTTAAGCCGAGG 59.833 50.000 23.71 0.00 43.38 4.63
605 4118 0.176910 AGAAGAGCTTAAGCCGAGGC 59.823 55.000 23.71 5.89 43.38 4.70
606 4119 0.812014 GAAGAGCTTAAGCCGAGGCC 60.812 60.000 23.71 0.00 43.38 5.19
607 4120 1.268283 AAGAGCTTAAGCCGAGGCCT 61.268 55.000 23.71 3.86 43.38 5.19
608 4121 1.227409 GAGCTTAAGCCGAGGCCTC 60.227 63.158 23.79 23.79 43.38 4.70
609 4122 2.203084 GCTTAAGCCGAGGCCTCC 60.203 66.667 27.20 14.03 43.17 4.30
610 4123 2.107141 CTTAAGCCGAGGCCTCCG 59.893 66.667 27.20 21.37 43.17 4.63
611 4124 2.363276 TTAAGCCGAGGCCTCCGA 60.363 61.111 27.20 4.91 43.17 4.55
612 4125 1.749334 CTTAAGCCGAGGCCTCCGAT 61.749 60.000 27.20 16.94 43.17 4.18
613 4126 1.745320 TTAAGCCGAGGCCTCCGATC 61.745 60.000 27.20 12.94 43.17 3.69
616 4129 2.115480 CCGAGGCCTCCGATCCTA 59.885 66.667 27.20 0.00 31.71 2.94
617 4130 1.974343 CCGAGGCCTCCGATCCTAG 60.974 68.421 27.20 10.02 31.71 3.02
618 4131 2.631580 CGAGGCCTCCGATCCTAGC 61.632 68.421 27.20 0.00 31.71 3.42
619 4132 2.203714 AGGCCTCCGATCCTAGCC 60.204 66.667 0.00 3.17 44.20 3.93
620 4133 2.524394 GGCCTCCGATCCTAGCCA 60.524 66.667 0.00 0.00 43.32 4.75
621 4134 2.140792 GGCCTCCGATCCTAGCCAA 61.141 63.158 0.00 0.00 43.32 4.52
622 4135 1.369321 GCCTCCGATCCTAGCCAAG 59.631 63.158 0.00 0.00 0.00 3.61
623 4136 1.369321 CCTCCGATCCTAGCCAAGC 59.631 63.158 0.00 0.00 0.00 4.01
624 4137 1.369321 CTCCGATCCTAGCCAAGCC 59.631 63.158 0.00 0.00 0.00 4.35
625 4138 2.029666 CCGATCCTAGCCAAGCCG 59.970 66.667 0.00 0.00 0.00 5.52
626 4139 2.498941 CCGATCCTAGCCAAGCCGA 61.499 63.158 0.00 0.00 0.00 5.54
627 4140 1.441729 CGATCCTAGCCAAGCCGAA 59.558 57.895 0.00 0.00 0.00 4.30
628 4141 0.598680 CGATCCTAGCCAAGCCGAAG 60.599 60.000 0.00 0.00 0.00 3.79
629 4142 0.882484 GATCCTAGCCAAGCCGAAGC 60.882 60.000 0.00 0.00 40.32 3.86
630 4143 2.330924 ATCCTAGCCAAGCCGAAGCC 62.331 60.000 0.00 0.00 41.25 4.35
631 4144 2.586792 CTAGCCAAGCCGAAGCCT 59.413 61.111 0.00 0.00 41.25 4.58
632 4145 1.078143 CTAGCCAAGCCGAAGCCTT 60.078 57.895 0.00 0.00 41.25 4.35
633 4146 1.078426 TAGCCAAGCCGAAGCCTTC 60.078 57.895 0.00 0.00 41.25 3.46
634 4147 2.536997 TAGCCAAGCCGAAGCCTTCC 62.537 60.000 0.00 0.00 41.25 3.46
635 4148 3.127533 CCAAGCCGAAGCCTTCCG 61.128 66.667 0.00 0.00 41.25 4.30
636 4149 2.358737 CAAGCCGAAGCCTTCCGT 60.359 61.111 0.00 0.00 41.25 4.69
637 4150 1.966451 CAAGCCGAAGCCTTCCGTT 60.966 57.895 0.00 0.00 41.25 4.44
638 4151 1.671379 AAGCCGAAGCCTTCCGTTC 60.671 57.895 0.00 0.00 41.25 3.95
639 4152 3.125573 GCCGAAGCCTTCCGTTCC 61.126 66.667 0.00 0.00 0.00 3.62
640 4153 2.813908 CCGAAGCCTTCCGTTCCG 60.814 66.667 0.00 0.00 0.00 4.30
650 4163 2.670592 CCGTTCCGGTCCAAACCC 60.671 66.667 0.00 0.00 43.21 4.11
651 4164 2.111460 CGTTCCGGTCCAAACCCA 59.889 61.111 0.00 0.00 43.21 4.51
652 4165 2.255881 CGTTCCGGTCCAAACCCAC 61.256 63.158 0.00 0.00 43.21 4.61
653 4166 1.149854 GTTCCGGTCCAAACCCACT 59.850 57.895 0.00 0.00 43.21 4.00
654 4167 0.466739 GTTCCGGTCCAAACCCACTT 60.467 55.000 0.00 0.00 43.21 3.16
655 4168 0.466555 TTCCGGTCCAAACCCACTTG 60.467 55.000 0.00 0.00 43.21 3.16
656 4169 1.152839 CCGGTCCAAACCCACTTGT 60.153 57.895 0.00 0.00 43.21 3.16
657 4170 0.753848 CCGGTCCAAACCCACTTGTT 60.754 55.000 0.00 0.00 43.21 2.83
658 4171 0.666374 CGGTCCAAACCCACTTGTTC 59.334 55.000 0.00 0.00 43.21 3.18
659 4172 0.666374 GGTCCAAACCCACTTGTTCG 59.334 55.000 0.00 0.00 39.93 3.95
660 4173 1.385528 GTCCAAACCCACTTGTTCGT 58.614 50.000 0.00 0.00 0.00 3.85
661 4174 1.064952 GTCCAAACCCACTTGTTCGTG 59.935 52.381 0.00 0.00 34.71 4.35
667 4180 2.932663 CCACTTGTTCGTGGCATCT 58.067 52.632 0.00 0.00 46.98 2.90
668 4181 1.238439 CCACTTGTTCGTGGCATCTT 58.762 50.000 0.00 0.00 46.98 2.40
669 4182 1.197721 CCACTTGTTCGTGGCATCTTC 59.802 52.381 0.00 0.00 46.98 2.87
670 4183 2.146342 CACTTGTTCGTGGCATCTTCT 58.854 47.619 0.00 0.00 0.00 2.85
671 4184 2.158449 CACTTGTTCGTGGCATCTTCTC 59.842 50.000 0.00 0.00 0.00 2.87
672 4185 1.734465 CTTGTTCGTGGCATCTTCTCC 59.266 52.381 0.00 0.00 0.00 3.71
673 4186 0.036388 TGTTCGTGGCATCTTCTCCC 60.036 55.000 0.00 0.00 0.00 4.30
674 4187 0.036388 GTTCGTGGCATCTTCTCCCA 60.036 55.000 0.00 0.00 0.00 4.37
675 4188 0.911769 TTCGTGGCATCTTCTCCCAT 59.088 50.000 0.00 0.00 0.00 4.00
676 4189 1.788229 TCGTGGCATCTTCTCCCATA 58.212 50.000 0.00 0.00 0.00 2.74
677 4190 2.329267 TCGTGGCATCTTCTCCCATAT 58.671 47.619 0.00 0.00 0.00 1.78
678 4191 2.705658 TCGTGGCATCTTCTCCCATATT 59.294 45.455 0.00 0.00 0.00 1.28
679 4192 3.136443 TCGTGGCATCTTCTCCCATATTT 59.864 43.478 0.00 0.00 0.00 1.40
680 4193 4.346709 TCGTGGCATCTTCTCCCATATTTA 59.653 41.667 0.00 0.00 0.00 1.40
681 4194 5.013079 TCGTGGCATCTTCTCCCATATTTAT 59.987 40.000 0.00 0.00 0.00 1.40
682 4195 6.212589 TCGTGGCATCTTCTCCCATATTTATA 59.787 38.462 0.00 0.00 0.00 0.98
683 4196 6.536582 CGTGGCATCTTCTCCCATATTTATAG 59.463 42.308 0.00 0.00 0.00 1.31
684 4197 6.317391 GTGGCATCTTCTCCCATATTTATAGC 59.683 42.308 0.00 0.00 0.00 2.97
685 4198 6.012596 TGGCATCTTCTCCCATATTTATAGCA 60.013 38.462 0.00 0.00 0.00 3.49
686 4199 6.541641 GGCATCTTCTCCCATATTTATAGCAG 59.458 42.308 0.00 0.00 0.00 4.24
687 4200 6.038050 GCATCTTCTCCCATATTTATAGCAGC 59.962 42.308 0.00 0.00 0.00 5.25
688 4201 6.054860 TCTTCTCCCATATTTATAGCAGCC 57.945 41.667 0.00 0.00 0.00 4.85
689 4202 4.471904 TCTCCCATATTTATAGCAGCCG 57.528 45.455 0.00 0.00 0.00 5.52
690 4203 2.939103 CTCCCATATTTATAGCAGCCGC 59.061 50.000 0.00 0.00 38.99 6.53
710 4223 4.785453 CCGAGCAGGCCAAGGTCC 62.785 72.222 18.16 4.89 0.00 4.46
711 4224 4.020617 CGAGCAGGCCAAGGTCCA 62.021 66.667 18.16 0.00 0.00 4.02
712 4225 2.436109 GAGCAGGCCAAGGTCCAA 59.564 61.111 5.01 0.00 0.00 3.53
713 4226 1.676967 GAGCAGGCCAAGGTCCAAG 60.677 63.158 5.01 0.00 0.00 3.61
714 4227 2.129555 GAGCAGGCCAAGGTCCAAGA 62.130 60.000 5.01 0.00 0.00 3.02
715 4228 1.676967 GCAGGCCAAGGTCCAAGAG 60.677 63.158 5.01 0.00 0.00 2.85
716 4229 1.763770 CAGGCCAAGGTCCAAGAGT 59.236 57.895 5.01 0.00 0.00 3.24
717 4230 0.984230 CAGGCCAAGGTCCAAGAGTA 59.016 55.000 5.01 0.00 0.00 2.59
718 4231 1.065854 CAGGCCAAGGTCCAAGAGTAG 60.066 57.143 5.01 0.00 0.00 2.57
719 4232 0.393132 GGCCAAGGTCCAAGAGTAGC 60.393 60.000 0.00 0.00 0.00 3.58
720 4233 0.393132 GCCAAGGTCCAAGAGTAGCC 60.393 60.000 0.00 0.00 0.00 3.93
721 4234 0.253327 CCAAGGTCCAAGAGTAGCCC 59.747 60.000 0.00 0.00 0.00 5.19
722 4235 0.984230 CAAGGTCCAAGAGTAGCCCA 59.016 55.000 0.00 0.00 0.00 5.36
723 4236 1.561542 CAAGGTCCAAGAGTAGCCCAT 59.438 52.381 0.00 0.00 0.00 4.00
724 4237 1.207791 AGGTCCAAGAGTAGCCCATG 58.792 55.000 0.00 0.00 0.00 3.66
725 4238 0.181350 GGTCCAAGAGTAGCCCATGG 59.819 60.000 4.14 4.14 0.00 3.66
726 4239 0.912486 GTCCAAGAGTAGCCCATGGT 59.088 55.000 11.73 0.00 32.90 3.55
727 4240 1.134371 GTCCAAGAGTAGCCCATGGTC 60.134 57.143 11.73 0.00 32.90 4.02
728 4241 1.207791 CCAAGAGTAGCCCATGGTCT 58.792 55.000 11.73 5.58 0.00 3.85
729 4242 1.134280 CCAAGAGTAGCCCATGGTCTG 60.134 57.143 11.73 0.00 0.00 3.51
730 4243 1.134280 CAAGAGTAGCCCATGGTCTGG 60.134 57.143 11.73 0.00 45.51 3.86
735 4248 4.380945 GCCCATGGTCTGGCCCAA 62.381 66.667 11.73 0.00 44.46 4.12
736 4249 2.362889 CCCATGGTCTGGCCCAAC 60.363 66.667 11.73 0.00 44.46 3.77
737 4250 2.440147 CCATGGTCTGGCCCAACA 59.560 61.111 2.57 0.00 38.47 3.33
738 4251 1.679977 CCATGGTCTGGCCCAACAG 60.680 63.158 2.57 0.00 38.47 3.16
739 4252 1.075482 CATGGTCTGGCCCAACAGT 59.925 57.895 0.00 0.00 38.20 3.55
740 4253 1.075482 ATGGTCTGGCCCAACAGTG 59.925 57.895 0.00 0.00 38.20 3.66
741 4254 2.282462 GGTCTGGCCCAACAGTGG 60.282 66.667 0.00 0.00 45.53 4.00
752 4265 3.732048 CCAACAGTGGGGTAAAGGTAT 57.268 47.619 0.00 0.00 41.77 2.73
753 4266 3.352648 CCAACAGTGGGGTAAAGGTATG 58.647 50.000 0.00 0.00 41.77 2.39
754 4267 2.752903 CAACAGTGGGGTAAAGGTATGC 59.247 50.000 0.00 0.00 0.00 3.14
755 4268 2.275466 ACAGTGGGGTAAAGGTATGCT 58.725 47.619 0.00 0.00 0.00 3.79
756 4269 2.026262 ACAGTGGGGTAAAGGTATGCTG 60.026 50.000 0.00 0.00 0.00 4.41
757 4270 2.238646 CAGTGGGGTAAAGGTATGCTGA 59.761 50.000 0.00 0.00 0.00 4.26
758 4271 2.238898 AGTGGGGTAAAGGTATGCTGAC 59.761 50.000 0.00 0.00 0.00 3.51
759 4272 2.026636 GTGGGGTAAAGGTATGCTGACA 60.027 50.000 0.00 0.00 0.00 3.58
790 4303 7.174253 TCTGTGCCGAAAAGTAATCAATAAAGT 59.826 33.333 0.00 0.00 0.00 2.66
795 4308 7.148306 GCCGAAAAGTAATCAATAAAGTGGAGA 60.148 37.037 0.00 0.00 0.00 3.71
804 4317 8.970859 AATCAATAAAGTGGAGAGTATTCCTG 57.029 34.615 0.00 0.00 38.12 3.86
809 4322 5.825593 AAGTGGAGAGTATTCCTGTCAAA 57.174 39.130 0.00 0.00 38.12 2.69
812 4325 5.998363 AGTGGAGAGTATTCCTGTCAAAAAC 59.002 40.000 0.00 0.00 38.12 2.43
916 4436 3.302415 GCGCCAAAAATCACAACTGAAAC 60.302 43.478 0.00 0.00 0.00 2.78
934 4455 1.705873 ACGCCCCTATAAGAGTGAGG 58.294 55.000 0.00 0.00 0.00 3.86
964 4485 7.274447 AGAGAAATCTGATCTGATCCTTCAAC 58.726 38.462 20.36 15.65 0.00 3.18
986 4507 5.784177 ACAGCGAATTCTCTTGAGAAGTAA 58.216 37.500 16.66 0.00 0.00 2.24
987 4508 5.866633 ACAGCGAATTCTCTTGAGAAGTAAG 59.133 40.000 16.66 12.77 0.00 2.34
1016 4537 3.874316 ACTATATGGAGCCATGGGAGAA 58.126 45.455 15.13 0.00 37.82 2.87
1128 4649 3.770040 CTCCCCGACATGGCGTCA 61.770 66.667 21.63 1.48 45.70 4.35
1202 4723 2.187946 CATCTTCCGCCGCTTCCT 59.812 61.111 0.00 0.00 0.00 3.36
1281 4802 0.690762 TTCCTCACCACTGCCCTAAC 59.309 55.000 0.00 0.00 0.00 2.34
1283 4804 1.299976 CTCACCACTGCCCTAACCC 59.700 63.158 0.00 0.00 0.00 4.11
1780 5304 1.671379 GACACCAAGAAGTCCCGGC 60.671 63.158 0.00 0.00 0.00 6.13
1799 5323 2.201022 ACTGCAAGGACGACGAGGT 61.201 57.895 0.00 0.00 39.30 3.85
2127 5651 3.395607 AGCCCCATTCATATCTGCTTGTA 59.604 43.478 0.00 0.00 0.00 2.41
2254 5779 8.529424 TGCTCCAGATGATGATAAGAAATTTT 57.471 30.769 0.00 0.00 0.00 1.82
2273 5798 9.638239 GAAATTTTAAGGTGCTTGATACAATGA 57.362 29.630 0.00 0.00 0.00 2.57
2296 5821 7.136885 TGAAGTAGGTAATCTCCCCTTTGATA 58.863 38.462 0.00 0.00 32.08 2.15
2335 5860 9.589461 TTATTTCCTTTTGGTTGTACTTCCATA 57.411 29.630 9.63 3.95 41.38 2.74
2396 5921 6.479006 CCAGATCAGGATTTGATGCCTAATA 58.521 40.000 0.00 0.00 46.51 0.98
2401 5926 5.536161 TCAGGATTTGATGCCTAATAAAGCC 59.464 40.000 0.00 0.00 38.50 4.35
2422 5947 6.273825 AGCCAGTACATGATAAAGTAGTTCG 58.726 40.000 0.00 0.00 0.00 3.95
2486 6011 4.514816 TGGTATTGTCACAGTGTGTCATTG 59.485 41.667 21.19 0.00 32.53 2.82
2671 6214 5.751243 TTCAGAAAGAACTACTTGGTTGC 57.249 39.130 0.00 0.00 38.98 4.17
2703 6247 5.757850 ATTGTTCAGTTTTCTCAGACACC 57.242 39.130 0.00 0.00 0.00 4.16
2713 6257 4.558226 TTCTCAGACACCACATATTGCT 57.442 40.909 0.00 0.00 0.00 3.91
2726 6270 6.203530 ACCACATATTGCTAGAATCAACGATG 59.796 38.462 0.00 0.00 0.00 3.84
2826 6395 4.566004 TGGCACCATCGCTTTATATAGTC 58.434 43.478 0.00 0.00 0.00 2.59
2847 6416 4.909880 GTCAACACCTGAATTCTTAAACGC 59.090 41.667 7.05 0.00 35.22 4.84
2962 7086 3.260884 TGTCATTAGTTTTCCTCCTCGCT 59.739 43.478 0.00 0.00 0.00 4.93
3027 7152 9.386010 TCGAATGCATGAATCATGATCATATAA 57.614 29.630 25.77 7.38 43.81 0.98
3062 7187 6.157820 TCTCCATTTCCATGTGTAATAGTGGA 59.842 38.462 0.00 0.00 38.90 4.02
3108 7233 3.937706 CCAGTTCCAGATGATTCAGTGAC 59.062 47.826 0.00 0.00 0.00 3.67
3149 7274 1.960689 TGGCTTACTGGCTTTGGTTTC 59.039 47.619 0.00 0.00 42.34 2.78
3162 7287 7.712797 TGGCTTTGGTTTCTAGTTTCTAAAAG 58.287 34.615 0.00 0.00 0.00 2.27
3194 7319 4.642437 TGCATTTCAGGTCAAGTTGTTACA 59.358 37.500 2.11 0.00 0.00 2.41
3225 7350 3.063045 CGATTAGCCGAAGTTGGGTTAAC 59.937 47.826 13.97 8.45 40.88 2.01
3239 7364 2.298610 GGTTAACTGGGGCATAAGAGC 58.701 52.381 5.42 0.00 0.00 4.09
3254 7379 1.774110 AGAGCGTCATCCAGATGTCT 58.226 50.000 7.48 0.84 39.72 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.209898 TACGCGTGTTCCCGTAGTG 59.790 57.895 24.59 0.00 38.75 2.74
1 2 3.667087 TACGCGTGTTCCCGTAGT 58.333 55.556 24.59 0.00 38.75 2.73
3 4 0.099259 CATCTACGCGTGTTCCCGTA 59.901 55.000 24.59 0.00 38.75 4.02
5 6 0.734942 AACATCTACGCGTGTTCCCG 60.735 55.000 24.59 7.83 33.53 5.14
6 7 0.719465 CAACATCTACGCGTGTTCCC 59.281 55.000 24.59 0.00 36.48 3.97
7 8 1.389106 GACAACATCTACGCGTGTTCC 59.611 52.381 24.59 7.63 36.48 3.62
8 9 1.057285 CGACAACATCTACGCGTGTTC 59.943 52.381 24.59 5.64 36.48 3.18
9 10 1.057636 CGACAACATCTACGCGTGTT 58.942 50.000 24.59 14.75 39.00 3.32
10 11 0.039798 ACGACAACATCTACGCGTGT 60.040 50.000 24.59 9.30 0.00 4.49
12 13 0.039798 ACACGACAACATCTACGCGT 60.040 50.000 19.17 19.17 0.00 6.01
14 15 0.093026 GCACACGACAACATCTACGC 59.907 55.000 0.00 0.00 0.00 4.42
15 16 0.362179 CGCACACGACAACATCTACG 59.638 55.000 0.00 0.00 43.93 3.51
16 17 0.093026 GCGCACACGACAACATCTAC 59.907 55.000 0.30 0.00 43.93 2.59
18 19 2.657757 CGCGCACACGACAACATCT 61.658 57.895 8.75 0.00 43.93 2.90
19 20 1.955529 ATCGCGCACACGACAACATC 61.956 55.000 8.75 0.00 46.28 3.06
21 22 2.241190 AATCGCGCACACGACAACA 61.241 52.632 8.75 0.00 46.28 3.33
22 23 1.788203 CAATCGCGCACACGACAAC 60.788 57.895 8.75 0.00 46.28 3.32
23 24 2.548787 CAATCGCGCACACGACAA 59.451 55.556 8.75 0.00 46.28 3.18
24 25 3.410516 CCAATCGCGCACACGACA 61.411 61.111 8.75 0.00 46.28 4.35
25 26 3.071459 CTCCAATCGCGCACACGAC 62.071 63.158 8.75 0.00 46.28 4.34
27 28 4.505217 GCTCCAATCGCGCACACG 62.505 66.667 8.75 0.00 44.07 4.49
28 29 4.505217 CGCTCCAATCGCGCACAC 62.505 66.667 8.75 0.00 44.33 3.82
56 57 4.704833 CAGACACCCCCACGCCAG 62.705 72.222 0.00 0.00 0.00 4.85
58 59 3.310860 CTACAGACACCCCCACGCC 62.311 68.421 0.00 0.00 0.00 5.68
60 61 2.264794 GCTACAGACACCCCCACG 59.735 66.667 0.00 0.00 0.00 4.94
61 62 2.669240 GGCTACAGACACCCCCAC 59.331 66.667 0.00 0.00 0.00 4.61
62 63 3.000819 CGGCTACAGACACCCCCA 61.001 66.667 0.00 0.00 0.00 4.96
63 64 3.001406 ACGGCTACAGACACCCCC 61.001 66.667 0.00 0.00 0.00 5.40
64 65 2.577593 GACGGCTACAGACACCCC 59.422 66.667 0.00 0.00 0.00 4.95
65 66 2.181021 CGACGGCTACAGACACCC 59.819 66.667 0.00 0.00 0.00 4.61
66 67 2.506438 GCGACGGCTACAGACACC 60.506 66.667 0.00 0.00 35.83 4.16
94 95 2.743928 CAGTTGGACTGCGGCCTC 60.744 66.667 0.00 0.00 39.62 4.70
95 96 4.335647 CCAGTTGGACTGCGGCCT 62.336 66.667 0.00 0.00 44.63 5.19
96 97 4.643387 ACCAGTTGGACTGCGGCC 62.643 66.667 4.92 0.00 44.63 6.13
106 107 1.891919 CCGTGTCCACCACCAGTTG 60.892 63.158 0.00 0.00 41.26 3.16
107 108 2.508928 CCGTGTCCACCACCAGTT 59.491 61.111 0.00 0.00 41.26 3.16
108 109 4.250305 GCCGTGTCCACCACCAGT 62.250 66.667 0.00 0.00 41.26 4.00
129 130 1.796796 GTTTCCATCTGTCCTGCGC 59.203 57.895 0.00 0.00 0.00 6.09
130 131 1.970917 GCGTTTCCATCTGTCCTGCG 61.971 60.000 0.00 0.00 0.00 5.18
131 132 1.796796 GCGTTTCCATCTGTCCTGC 59.203 57.895 0.00 0.00 0.00 4.85
132 133 1.361668 CCGCGTTTCCATCTGTCCTG 61.362 60.000 4.92 0.00 0.00 3.86
133 134 1.079127 CCGCGTTTCCATCTGTCCT 60.079 57.895 4.92 0.00 0.00 3.85
135 136 2.750888 GGCCGCGTTTCCATCTGTC 61.751 63.158 4.92 0.00 0.00 3.51
136 137 2.746277 GGCCGCGTTTCCATCTGT 60.746 61.111 4.92 0.00 0.00 3.41
138 139 3.599285 TTCGGCCGCGTTTCCATCT 62.599 57.895 23.51 0.00 0.00 2.90
139 140 3.122323 TTCGGCCGCGTTTCCATC 61.122 61.111 23.51 0.00 0.00 3.51
140 141 3.428282 GTTCGGCCGCGTTTCCAT 61.428 61.111 23.51 0.00 0.00 3.41
142 143 3.785499 GAGTTCGGCCGCGTTTCC 61.785 66.667 23.51 3.11 0.00 3.13
143 144 4.130281 CGAGTTCGGCCGCGTTTC 62.130 66.667 23.51 14.02 35.37 2.78
144 145 4.955774 ACGAGTTCGGCCGCGTTT 62.956 61.111 23.51 5.51 44.95 3.60
154 155 0.642800 GCTTCATCAGCGACGAGTTC 59.357 55.000 0.00 0.00 39.29 3.01
155 156 2.743195 GCTTCATCAGCGACGAGTT 58.257 52.632 0.00 0.00 39.29 3.01
156 157 4.485554 GCTTCATCAGCGACGAGT 57.514 55.556 0.00 0.00 39.29 4.18
214 3727 3.599412 TTCGCCAGAAGGTGTGTAC 57.401 52.632 0.00 0.00 45.81 2.90
226 3739 2.840572 TATAGGCCGCCTTCGCCA 60.841 61.111 19.35 0.00 34.61 5.69
227 3740 2.048127 CTATAGGCCGCCTTCGCC 60.048 66.667 19.35 0.00 34.61 5.54
238 3751 2.490115 CCAAGCTAGACGAGGCTATAGG 59.510 54.545 1.04 0.00 37.87 2.57
240 3753 2.885266 CACCAAGCTAGACGAGGCTATA 59.115 50.000 0.00 0.00 37.87 1.31
245 3758 0.108615 CCACACCAAGCTAGACGAGG 60.109 60.000 0.00 0.00 0.00 4.63
247 3760 0.888619 CTCCACACCAAGCTAGACGA 59.111 55.000 0.00 0.00 0.00 4.20
248 3761 0.108615 CCTCCACACCAAGCTAGACG 60.109 60.000 0.00 0.00 0.00 4.18
252 3765 1.972198 CGACCTCCACACCAAGCTA 59.028 57.895 0.00 0.00 0.00 3.32
282 3795 1.558756 AGGCTGGAGAAGTTCATGGAG 59.441 52.381 5.50 0.00 0.00 3.86
283 3796 1.556911 GAGGCTGGAGAAGTTCATGGA 59.443 52.381 5.50 0.00 0.00 3.41
284 3797 1.741732 CGAGGCTGGAGAAGTTCATGG 60.742 57.143 5.50 0.00 0.00 3.66
285 3798 1.649664 CGAGGCTGGAGAAGTTCATG 58.350 55.000 5.50 0.00 0.00 3.07
286 3799 0.107945 GCGAGGCTGGAGAAGTTCAT 60.108 55.000 5.50 0.00 0.00 2.57
287 3800 1.293498 GCGAGGCTGGAGAAGTTCA 59.707 57.895 5.50 0.00 0.00 3.18
288 3801 1.448717 GGCGAGGCTGGAGAAGTTC 60.449 63.158 0.00 0.00 0.00 3.01
289 3802 1.484444 AAGGCGAGGCTGGAGAAGTT 61.484 55.000 0.00 0.00 0.00 2.66
290 3803 1.915769 AAGGCGAGGCTGGAGAAGT 60.916 57.895 0.00 0.00 0.00 3.01
291 3804 1.449246 CAAGGCGAGGCTGGAGAAG 60.449 63.158 0.00 0.00 0.00 2.85
292 3805 2.665000 CAAGGCGAGGCTGGAGAA 59.335 61.111 0.00 0.00 0.00 2.87
293 3806 3.393970 CCAAGGCGAGGCTGGAGA 61.394 66.667 0.00 0.00 31.38 3.71
294 3807 3.393970 TCCAAGGCGAGGCTGGAG 61.394 66.667 0.00 0.00 34.26 3.86
295 3808 3.393970 CTCCAAGGCGAGGCTGGA 61.394 66.667 0.00 9.48 36.89 3.86
296 3809 4.479993 CCTCCAAGGCGAGGCTGG 62.480 72.222 0.00 0.00 43.01 4.85
305 3818 3.431725 GTTTCGCCGCCTCCAAGG 61.432 66.667 0.00 0.00 38.80 3.61
306 3819 1.912371 GAAGTTTCGCCGCCTCCAAG 61.912 60.000 0.00 0.00 0.00 3.61
307 3820 1.964373 GAAGTTTCGCCGCCTCCAA 60.964 57.895 0.00 0.00 0.00 3.53
308 3821 2.358247 GAAGTTTCGCCGCCTCCA 60.358 61.111 0.00 0.00 0.00 3.86
309 3822 3.488090 CGAAGTTTCGCCGCCTCC 61.488 66.667 0.92 0.00 44.26 4.30
318 3831 2.031508 TCGCAATTTGGACCGAAGTTTC 60.032 45.455 0.00 0.00 0.00 2.78
319 3832 1.950909 TCGCAATTTGGACCGAAGTTT 59.049 42.857 0.00 0.00 0.00 2.66
320 3833 1.535462 CTCGCAATTTGGACCGAAGTT 59.465 47.619 0.00 0.00 0.00 2.66
321 3834 1.156736 CTCGCAATTTGGACCGAAGT 58.843 50.000 0.00 0.00 0.00 3.01
322 3835 0.179189 GCTCGCAATTTGGACCGAAG 60.179 55.000 0.00 0.00 0.00 3.79
323 3836 0.605319 AGCTCGCAATTTGGACCGAA 60.605 50.000 0.00 0.00 0.00 4.30
324 3837 0.248012 TAGCTCGCAATTTGGACCGA 59.752 50.000 0.00 0.00 0.00 4.69
325 3838 0.652592 CTAGCTCGCAATTTGGACCG 59.347 55.000 0.00 0.00 0.00 4.79
326 3839 0.378610 GCTAGCTCGCAATTTGGACC 59.621 55.000 7.70 0.00 0.00 4.46
327 3840 1.063174 CAGCTAGCTCGCAATTTGGAC 59.937 52.381 16.15 0.00 0.00 4.02
328 3841 1.372582 CAGCTAGCTCGCAATTTGGA 58.627 50.000 16.15 0.00 0.00 3.53
329 3842 0.379669 CCAGCTAGCTCGCAATTTGG 59.620 55.000 16.15 7.68 0.00 3.28
330 3843 0.379669 CCCAGCTAGCTCGCAATTTG 59.620 55.000 16.15 1.36 0.00 2.32
331 3844 1.379642 GCCCAGCTAGCTCGCAATTT 61.380 55.000 22.69 0.00 0.00 1.82
332 3845 1.821332 GCCCAGCTAGCTCGCAATT 60.821 57.895 22.69 0.00 0.00 2.32
333 3846 2.203126 GCCCAGCTAGCTCGCAAT 60.203 61.111 22.69 0.00 0.00 3.56
334 3847 4.473520 GGCCCAGCTAGCTCGCAA 62.474 66.667 26.64 0.00 0.00 4.85
336 3849 4.168291 AAGGCCCAGCTAGCTCGC 62.168 66.667 16.15 18.83 0.00 5.03
337 3850 2.107953 GAAGGCCCAGCTAGCTCG 59.892 66.667 16.15 8.64 0.00 5.03
338 3851 1.145819 CTGAAGGCCCAGCTAGCTC 59.854 63.158 16.15 3.47 0.00 4.09
339 3852 0.911525 TTCTGAAGGCCCAGCTAGCT 60.912 55.000 12.68 12.68 34.28 3.32
340 3853 0.746204 GTTCTGAAGGCCCAGCTAGC 60.746 60.000 6.62 6.62 34.28 3.42
341 3854 0.107459 GGTTCTGAAGGCCCAGCTAG 60.107 60.000 0.00 0.00 34.28 3.42
342 3855 0.547712 AGGTTCTGAAGGCCCAGCTA 60.548 55.000 0.00 0.00 34.28 3.32
343 3856 1.846712 GAGGTTCTGAAGGCCCAGCT 61.847 60.000 0.00 0.00 34.28 4.24
344 3857 1.377856 GAGGTTCTGAAGGCCCAGC 60.378 63.158 0.00 0.00 34.28 4.85
345 3858 0.622665 ATGAGGTTCTGAAGGCCCAG 59.377 55.000 0.00 0.00 35.55 4.45
346 3859 1.559682 GTATGAGGTTCTGAAGGCCCA 59.440 52.381 0.00 0.00 0.00 5.36
347 3860 1.473434 CGTATGAGGTTCTGAAGGCCC 60.473 57.143 0.00 0.00 0.00 5.80
348 3861 1.207329 ACGTATGAGGTTCTGAAGGCC 59.793 52.381 0.00 0.00 0.00 5.19
349 3862 2.541556 GACGTATGAGGTTCTGAAGGC 58.458 52.381 0.00 0.00 0.00 4.35
350 3863 2.422479 TCGACGTATGAGGTTCTGAAGG 59.578 50.000 0.00 0.00 0.00 3.46
351 3864 3.119955 TGTCGACGTATGAGGTTCTGAAG 60.120 47.826 11.62 0.00 0.00 3.02
352 3865 2.815503 TGTCGACGTATGAGGTTCTGAA 59.184 45.455 11.62 0.00 0.00 3.02
353 3866 2.429478 TGTCGACGTATGAGGTTCTGA 58.571 47.619 11.62 0.00 0.00 3.27
354 3867 2.913777 TGTCGACGTATGAGGTTCTG 57.086 50.000 11.62 0.00 0.00 3.02
355 3868 3.572584 GTTTGTCGACGTATGAGGTTCT 58.427 45.455 11.62 0.00 0.00 3.01
356 3869 2.665052 GGTTTGTCGACGTATGAGGTTC 59.335 50.000 11.62 0.00 0.00 3.62
357 3870 2.611224 GGGTTTGTCGACGTATGAGGTT 60.611 50.000 11.62 0.00 0.00 3.50
358 3871 1.067354 GGGTTTGTCGACGTATGAGGT 60.067 52.381 11.62 0.00 0.00 3.85
359 3872 1.203994 AGGGTTTGTCGACGTATGAGG 59.796 52.381 11.62 0.00 0.00 3.86
360 3873 2.527100 GAGGGTTTGTCGACGTATGAG 58.473 52.381 11.62 0.00 0.00 2.90
361 3874 1.203052 GGAGGGTTTGTCGACGTATGA 59.797 52.381 11.62 0.00 0.00 2.15
362 3875 1.636988 GGAGGGTTTGTCGACGTATG 58.363 55.000 11.62 0.00 0.00 2.39
363 3876 0.171903 CGGAGGGTTTGTCGACGTAT 59.828 55.000 11.62 0.00 0.00 3.06
364 3877 1.580942 CGGAGGGTTTGTCGACGTA 59.419 57.895 11.62 0.00 0.00 3.57
365 3878 2.337532 CGGAGGGTTTGTCGACGT 59.662 61.111 11.62 0.00 0.00 4.34
383 3896 2.442272 TCCTGACGGCCCTCTAGC 60.442 66.667 0.00 0.00 0.00 3.42
384 3897 2.494530 GCTCCTGACGGCCCTCTAG 61.495 68.421 0.00 0.00 0.00 2.43
385 3898 2.442272 GCTCCTGACGGCCCTCTA 60.442 66.667 0.00 0.00 0.00 2.43
386 3899 4.390556 AGCTCCTGACGGCCCTCT 62.391 66.667 0.00 0.00 0.00 3.69
387 3900 3.844090 GAGCTCCTGACGGCCCTC 61.844 72.222 0.87 0.00 0.00 4.30
409 3922 3.853330 CATGGACTTGCGACGGCG 61.853 66.667 6.12 6.12 44.10 6.46
410 3923 3.499737 CCATGGACTTGCGACGGC 61.500 66.667 5.56 0.00 40.52 5.68
411 3924 0.744414 ATTCCATGGACTTGCGACGG 60.744 55.000 15.91 0.00 0.00 4.79
412 3925 1.086696 AATTCCATGGACTTGCGACG 58.913 50.000 15.91 0.00 0.00 5.12
413 3926 2.083774 TCAATTCCATGGACTTGCGAC 58.916 47.619 30.51 0.00 35.59 5.19
414 3927 2.488204 TCAATTCCATGGACTTGCGA 57.512 45.000 30.51 17.53 35.59 5.10
415 3928 3.441163 CAATCAATTCCATGGACTTGCG 58.559 45.455 30.51 20.48 35.59 4.85
416 3929 3.431207 CCCAATCAATTCCATGGACTTGC 60.431 47.826 30.51 0.00 35.59 4.01
417 3930 4.025360 TCCCAATCAATTCCATGGACTTG 58.975 43.478 29.83 29.83 36.52 3.16
418 3931 4.335735 TCCCAATCAATTCCATGGACTT 57.664 40.909 15.91 13.36 34.82 3.01
419 3932 4.335735 TTCCCAATCAATTCCATGGACT 57.664 40.909 15.91 6.30 34.82 3.85
420 3933 5.419239 TTTTCCCAATCAATTCCATGGAC 57.581 39.130 15.91 0.00 34.82 4.02
440 3953 7.344095 TGCACCAAAAATCCATCAAATTTTT 57.656 28.000 0.00 1.75 43.54 1.94
441 3954 6.956202 TGCACCAAAAATCCATCAAATTTT 57.044 29.167 0.00 0.00 37.80 1.82
442 3955 6.715718 TCATGCACCAAAAATCCATCAAATTT 59.284 30.769 0.00 0.00 0.00 1.82
443 3956 6.239396 TCATGCACCAAAAATCCATCAAATT 58.761 32.000 0.00 0.00 0.00 1.82
444 3957 5.806818 TCATGCACCAAAAATCCATCAAAT 58.193 33.333 0.00 0.00 0.00 2.32
445 3958 5.224821 TCATGCACCAAAAATCCATCAAA 57.775 34.783 0.00 0.00 0.00 2.69
446 3959 4.886496 TCATGCACCAAAAATCCATCAA 57.114 36.364 0.00 0.00 0.00 2.57
447 3960 4.466726 TGATCATGCACCAAAAATCCATCA 59.533 37.500 0.00 0.00 0.00 3.07
448 3961 5.013568 TGATCATGCACCAAAAATCCATC 57.986 39.130 0.00 0.00 0.00 3.51
449 3962 5.423704 TTGATCATGCACCAAAAATCCAT 57.576 34.783 0.00 0.00 0.00 3.41
450 3963 4.886496 TTGATCATGCACCAAAAATCCA 57.114 36.364 0.00 0.00 0.00 3.41
451 3964 4.091800 CGTTTGATCATGCACCAAAAATCC 59.908 41.667 0.00 0.00 32.44 3.01
452 3965 4.685628 ACGTTTGATCATGCACCAAAAATC 59.314 37.500 0.00 0.00 32.44 2.17
453 3966 4.630111 ACGTTTGATCATGCACCAAAAAT 58.370 34.783 0.00 0.00 32.44 1.82
454 3967 4.047822 GACGTTTGATCATGCACCAAAAA 58.952 39.130 0.00 0.00 32.44 1.94
455 3968 3.317711 AGACGTTTGATCATGCACCAAAA 59.682 39.130 0.00 0.00 32.44 2.44
456 3969 2.884012 AGACGTTTGATCATGCACCAAA 59.116 40.909 0.00 0.00 0.00 3.28
457 3970 2.483877 GAGACGTTTGATCATGCACCAA 59.516 45.455 0.00 0.00 0.00 3.67
458 3971 2.076100 GAGACGTTTGATCATGCACCA 58.924 47.619 0.00 0.00 0.00 4.17
459 3972 2.094894 CAGAGACGTTTGATCATGCACC 59.905 50.000 0.00 0.00 0.00 5.01
460 3973 2.995939 TCAGAGACGTTTGATCATGCAC 59.004 45.455 0.00 0.00 0.00 4.57
461 3974 3.317603 TCAGAGACGTTTGATCATGCA 57.682 42.857 0.00 0.00 0.00 3.96
462 3975 3.545624 GCATCAGAGACGTTTGATCATGC 60.546 47.826 0.00 7.29 31.91 4.06
463 3976 3.002042 GGCATCAGAGACGTTTGATCATG 59.998 47.826 0.00 0.00 31.91 3.07
464 3977 3.201290 GGCATCAGAGACGTTTGATCAT 58.799 45.455 0.00 0.00 31.91 2.45
465 3978 2.028203 TGGCATCAGAGACGTTTGATCA 60.028 45.455 7.82 0.00 31.91 2.92
466 3979 2.621338 TGGCATCAGAGACGTTTGATC 58.379 47.619 7.82 0.00 31.91 2.92
467 3980 2.768253 TGGCATCAGAGACGTTTGAT 57.232 45.000 0.00 0.00 34.48 2.57
468 3981 2.542020 TTGGCATCAGAGACGTTTGA 57.458 45.000 0.00 0.00 0.00 2.69
469 3982 3.058016 ACAATTGGCATCAGAGACGTTTG 60.058 43.478 10.83 0.00 0.00 2.93
470 3983 3.058016 CACAATTGGCATCAGAGACGTTT 60.058 43.478 10.83 0.00 0.00 3.60
471 3984 2.485426 CACAATTGGCATCAGAGACGTT 59.515 45.455 10.83 0.00 0.00 3.99
472 3985 2.079158 CACAATTGGCATCAGAGACGT 58.921 47.619 10.83 0.00 0.00 4.34
473 3986 2.349590 TCACAATTGGCATCAGAGACG 58.650 47.619 10.83 0.00 0.00 4.18
474 3987 2.681848 CCTCACAATTGGCATCAGAGAC 59.318 50.000 10.83 0.00 0.00 3.36
475 3988 2.573009 TCCTCACAATTGGCATCAGAGA 59.427 45.455 10.83 0.00 0.00 3.10
476 3989 2.995283 TCCTCACAATTGGCATCAGAG 58.005 47.619 10.83 6.81 0.00 3.35
477 3990 3.201487 AGATCCTCACAATTGGCATCAGA 59.799 43.478 10.83 0.00 0.00 3.27
478 3991 3.552875 AGATCCTCACAATTGGCATCAG 58.447 45.455 10.83 0.00 0.00 2.90
479 3992 3.657398 AGATCCTCACAATTGGCATCA 57.343 42.857 10.83 0.00 0.00 3.07
480 3993 5.128919 AGTAAGATCCTCACAATTGGCATC 58.871 41.667 10.83 3.72 0.00 3.91
481 3994 5.121380 AGTAAGATCCTCACAATTGGCAT 57.879 39.130 10.83 0.00 0.00 4.40
482 3995 4.574674 AGTAAGATCCTCACAATTGGCA 57.425 40.909 10.83 0.00 0.00 4.92
483 3996 5.675538 AGTAGTAAGATCCTCACAATTGGC 58.324 41.667 10.83 0.00 0.00 4.52
484 3997 9.838339 AATTAGTAGTAAGATCCTCACAATTGG 57.162 33.333 10.83 0.00 0.00 3.16
501 4014 9.593134 CTGCTCTAAGTTGAATGAATTAGTAGT 57.407 33.333 0.00 0.00 0.00 2.73
502 4015 9.593134 ACTGCTCTAAGTTGAATGAATTAGTAG 57.407 33.333 0.00 0.00 0.00 2.57
504 4017 9.372369 GTACTGCTCTAAGTTGAATGAATTAGT 57.628 33.333 0.00 0.00 0.00 2.24
505 4018 9.371136 TGTACTGCTCTAAGTTGAATGAATTAG 57.629 33.333 0.00 0.00 0.00 1.73
506 4019 9.151471 GTGTACTGCTCTAAGTTGAATGAATTA 57.849 33.333 0.00 0.00 0.00 1.40
507 4020 7.880195 AGTGTACTGCTCTAAGTTGAATGAATT 59.120 33.333 0.00 0.00 0.00 2.17
508 4021 7.390027 AGTGTACTGCTCTAAGTTGAATGAAT 58.610 34.615 0.00 0.00 0.00 2.57
509 4022 6.759272 AGTGTACTGCTCTAAGTTGAATGAA 58.241 36.000 0.00 0.00 0.00 2.57
510 4023 6.346477 AGTGTACTGCTCTAAGTTGAATGA 57.654 37.500 0.00 0.00 0.00 2.57
511 4024 5.287274 CGAGTGTACTGCTCTAAGTTGAATG 59.713 44.000 13.39 0.00 0.00 2.67
512 4025 5.183331 TCGAGTGTACTGCTCTAAGTTGAAT 59.817 40.000 13.39 0.00 0.00 2.57
513 4026 4.517832 TCGAGTGTACTGCTCTAAGTTGAA 59.482 41.667 13.39 0.00 0.00 2.69
514 4027 4.070009 TCGAGTGTACTGCTCTAAGTTGA 58.930 43.478 13.39 3.24 0.00 3.18
515 4028 4.421033 TCGAGTGTACTGCTCTAAGTTG 57.579 45.455 13.39 1.47 0.00 3.16
516 4029 5.646577 ATTCGAGTGTACTGCTCTAAGTT 57.353 39.130 13.39 0.00 0.00 2.66
517 4030 5.646577 AATTCGAGTGTACTGCTCTAAGT 57.353 39.130 13.39 7.52 0.00 2.24
518 4031 6.552629 TGTAATTCGAGTGTACTGCTCTAAG 58.447 40.000 13.39 2.52 0.00 2.18
519 4032 6.373495 TCTGTAATTCGAGTGTACTGCTCTAA 59.627 38.462 13.39 10.26 0.00 2.10
520 4033 5.878669 TCTGTAATTCGAGTGTACTGCTCTA 59.121 40.000 13.39 3.38 0.00 2.43
521 4034 4.700692 TCTGTAATTCGAGTGTACTGCTCT 59.299 41.667 13.39 0.01 0.00 4.09
522 4035 4.982999 TCTGTAATTCGAGTGTACTGCTC 58.017 43.478 7.62 7.62 0.00 4.26
523 4036 5.386958 TTCTGTAATTCGAGTGTACTGCT 57.613 39.130 0.00 0.00 0.00 4.24
524 4037 4.563184 CCTTCTGTAATTCGAGTGTACTGC 59.437 45.833 0.00 0.00 0.00 4.40
525 4038 5.950883 TCCTTCTGTAATTCGAGTGTACTG 58.049 41.667 0.00 0.00 0.00 2.74
526 4039 6.777213 ATCCTTCTGTAATTCGAGTGTACT 57.223 37.500 0.00 0.00 0.00 2.73
527 4040 7.033791 TCAATCCTTCTGTAATTCGAGTGTAC 58.966 38.462 0.00 0.00 0.00 2.90
528 4041 7.165460 TCAATCCTTCTGTAATTCGAGTGTA 57.835 36.000 0.00 0.00 0.00 2.90
529 4042 6.037786 TCAATCCTTCTGTAATTCGAGTGT 57.962 37.500 0.00 0.00 0.00 3.55
530 4043 6.456181 GCTTCAATCCTTCTGTAATTCGAGTG 60.456 42.308 0.00 0.00 0.00 3.51
531 4044 5.582665 GCTTCAATCCTTCTGTAATTCGAGT 59.417 40.000 0.00 0.00 0.00 4.18
532 4045 5.814705 AGCTTCAATCCTTCTGTAATTCGAG 59.185 40.000 0.00 0.00 0.00 4.04
533 4046 5.734720 AGCTTCAATCCTTCTGTAATTCGA 58.265 37.500 0.00 0.00 0.00 3.71
534 4047 6.428385 AAGCTTCAATCCTTCTGTAATTCG 57.572 37.500 0.00 0.00 0.00 3.34
535 4048 7.336931 TGGTAAGCTTCAATCCTTCTGTAATTC 59.663 37.037 0.00 0.00 0.00 2.17
536 4049 7.175104 TGGTAAGCTTCAATCCTTCTGTAATT 58.825 34.615 0.00 0.00 0.00 1.40
537 4050 6.721318 TGGTAAGCTTCAATCCTTCTGTAAT 58.279 36.000 0.00 0.00 0.00 1.89
538 4051 6.121776 TGGTAAGCTTCAATCCTTCTGTAA 57.878 37.500 0.00 0.00 0.00 2.41
539 4052 5.755409 TGGTAAGCTTCAATCCTTCTGTA 57.245 39.130 0.00 0.00 0.00 2.74
540 4053 4.640771 TGGTAAGCTTCAATCCTTCTGT 57.359 40.909 0.00 0.00 0.00 3.41
541 4054 5.649395 TCATTGGTAAGCTTCAATCCTTCTG 59.351 40.000 0.00 0.00 31.95 3.02
542 4055 5.819991 TCATTGGTAAGCTTCAATCCTTCT 58.180 37.500 0.00 0.00 31.95 2.85
543 4056 6.375455 TCTTCATTGGTAAGCTTCAATCCTTC 59.625 38.462 0.00 0.00 31.95 3.46
544 4057 6.248433 TCTTCATTGGTAAGCTTCAATCCTT 58.752 36.000 0.00 0.00 31.95 3.36
545 4058 5.819991 TCTTCATTGGTAAGCTTCAATCCT 58.180 37.500 0.00 0.00 31.95 3.24
546 4059 6.515272 TTCTTCATTGGTAAGCTTCAATCC 57.485 37.500 0.00 2.53 31.95 3.01
547 4060 8.866956 CAAATTCTTCATTGGTAAGCTTCAATC 58.133 33.333 0.00 0.00 31.95 2.67
548 4061 8.587608 TCAAATTCTTCATTGGTAAGCTTCAAT 58.412 29.630 0.00 4.75 34.31 2.57
549 4062 7.950512 TCAAATTCTTCATTGGTAAGCTTCAA 58.049 30.769 0.00 2.02 0.00 2.69
550 4063 7.448161 TCTCAAATTCTTCATTGGTAAGCTTCA 59.552 33.333 0.00 0.00 0.00 3.02
551 4064 7.820648 TCTCAAATTCTTCATTGGTAAGCTTC 58.179 34.615 0.00 0.00 0.00 3.86
552 4065 7.094032 CCTCTCAAATTCTTCATTGGTAAGCTT 60.094 37.037 3.48 3.48 0.00 3.74
553 4066 6.376581 CCTCTCAAATTCTTCATTGGTAAGCT 59.623 38.462 0.00 0.00 0.00 3.74
554 4067 6.375455 TCCTCTCAAATTCTTCATTGGTAAGC 59.625 38.462 0.00 0.00 0.00 3.09
555 4068 7.928307 TCCTCTCAAATTCTTCATTGGTAAG 57.072 36.000 0.00 0.00 0.00 2.34
556 4069 8.163408 TCTTCCTCTCAAATTCTTCATTGGTAA 58.837 33.333 0.00 0.00 0.00 2.85
557 4070 7.689299 TCTTCCTCTCAAATTCTTCATTGGTA 58.311 34.615 0.00 0.00 0.00 3.25
558 4071 6.546484 TCTTCCTCTCAAATTCTTCATTGGT 58.454 36.000 0.00 0.00 0.00 3.67
559 4072 7.392673 TCTTCTTCCTCTCAAATTCTTCATTGG 59.607 37.037 0.00 0.00 0.00 3.16
560 4073 8.332996 TCTTCTTCCTCTCAAATTCTTCATTG 57.667 34.615 0.00 0.00 0.00 2.82
561 4074 8.930846 TTCTTCTTCCTCTCAAATTCTTCATT 57.069 30.769 0.00 0.00 0.00 2.57
562 4075 8.381636 TCTTCTTCTTCCTCTCAAATTCTTCAT 58.618 33.333 0.00 0.00 0.00 2.57
563 4076 7.739825 TCTTCTTCTTCCTCTCAAATTCTTCA 58.260 34.615 0.00 0.00 0.00 3.02
564 4077 8.614469 TTCTTCTTCTTCCTCTCAAATTCTTC 57.386 34.615 0.00 0.00 0.00 2.87
565 4078 8.435982 TCTTCTTCTTCTTCCTCTCAAATTCTT 58.564 33.333 0.00 0.00 0.00 2.52
566 4079 7.972301 TCTTCTTCTTCTTCCTCTCAAATTCT 58.028 34.615 0.00 0.00 0.00 2.40
567 4080 7.148423 GCTCTTCTTCTTCTTCCTCTCAAATTC 60.148 40.741 0.00 0.00 0.00 2.17
568 4081 6.654582 GCTCTTCTTCTTCTTCCTCTCAAATT 59.345 38.462 0.00 0.00 0.00 1.82
569 4082 6.013466 AGCTCTTCTTCTTCTTCCTCTCAAAT 60.013 38.462 0.00 0.00 0.00 2.32
570 4083 5.306678 AGCTCTTCTTCTTCTTCCTCTCAAA 59.693 40.000 0.00 0.00 0.00 2.69
571 4084 4.837860 AGCTCTTCTTCTTCTTCCTCTCAA 59.162 41.667 0.00 0.00 0.00 3.02
572 4085 4.415596 AGCTCTTCTTCTTCTTCCTCTCA 58.584 43.478 0.00 0.00 0.00 3.27
573 4086 5.405935 AAGCTCTTCTTCTTCTTCCTCTC 57.594 43.478 0.00 0.00 0.00 3.20
574 4087 6.574269 GCTTAAGCTCTTCTTCTTCTTCCTCT 60.574 42.308 20.38 0.00 36.25 3.69
575 4088 5.580691 GCTTAAGCTCTTCTTCTTCTTCCTC 59.419 44.000 20.38 0.00 36.25 3.71
576 4089 5.487433 GCTTAAGCTCTTCTTCTTCTTCCT 58.513 41.667 20.38 0.00 36.25 3.36
577 4090 4.634004 GGCTTAAGCTCTTCTTCTTCTTCC 59.366 45.833 25.88 0.66 41.70 3.46
578 4091 4.328712 CGGCTTAAGCTCTTCTTCTTCTTC 59.671 45.833 25.88 4.18 41.70 2.87
579 4092 4.021016 TCGGCTTAAGCTCTTCTTCTTCTT 60.021 41.667 25.88 0.00 41.70 2.52
580 4093 3.511934 TCGGCTTAAGCTCTTCTTCTTCT 59.488 43.478 25.88 0.00 41.70 2.85
581 4094 3.851098 TCGGCTTAAGCTCTTCTTCTTC 58.149 45.455 25.88 5.29 41.70 2.87
582 4095 3.368948 CCTCGGCTTAAGCTCTTCTTCTT 60.369 47.826 25.88 0.00 41.70 2.52
583 4096 2.167487 CCTCGGCTTAAGCTCTTCTTCT 59.833 50.000 25.88 0.00 41.70 2.85
584 4097 2.545731 CCTCGGCTTAAGCTCTTCTTC 58.454 52.381 25.88 7.43 41.70 2.87
585 4098 1.406205 GCCTCGGCTTAAGCTCTTCTT 60.406 52.381 25.88 0.00 41.70 2.52
586 4099 0.176910 GCCTCGGCTTAAGCTCTTCT 59.823 55.000 25.88 0.00 41.70 2.85
587 4100 0.812014 GGCCTCGGCTTAAGCTCTTC 60.812 60.000 25.88 9.22 41.70 2.87
588 4101 1.222113 GGCCTCGGCTTAAGCTCTT 59.778 57.895 25.88 0.00 41.70 2.85
589 4102 1.681486 GAGGCCTCGGCTTAAGCTCT 61.681 60.000 25.88 13.64 38.98 4.09
590 4103 1.227409 GAGGCCTCGGCTTAAGCTC 60.227 63.158 25.88 15.24 38.98 4.09
591 4104 2.736826 GGAGGCCTCGGCTTAAGCT 61.737 63.158 26.36 5.08 38.98 3.74
592 4105 2.203084 GGAGGCCTCGGCTTAAGC 60.203 66.667 26.36 19.53 38.98 3.09
593 4106 1.749334 ATCGGAGGCCTCGGCTTAAG 61.749 60.000 30.35 14.11 38.98 1.85
594 4107 1.745320 GATCGGAGGCCTCGGCTTAA 61.745 60.000 30.35 16.85 38.98 1.85
595 4108 2.123425 ATCGGAGGCCTCGGCTTA 60.123 61.111 30.35 17.19 38.98 3.09
596 4109 3.541713 GATCGGAGGCCTCGGCTT 61.542 66.667 30.35 21.38 38.98 4.35
599 4112 1.974343 CTAGGATCGGAGGCCTCGG 60.974 68.421 29.56 29.56 34.75 4.63
600 4113 2.631580 GCTAGGATCGGAGGCCTCG 61.632 68.421 26.36 20.47 34.75 4.63
601 4114 2.279810 GGCTAGGATCGGAGGCCTC 61.280 68.421 25.59 25.59 39.68 4.70
602 4115 2.203714 GGCTAGGATCGGAGGCCT 60.204 66.667 3.86 3.86 39.68 5.19
603 4116 2.105806 CTTGGCTAGGATCGGAGGCC 62.106 65.000 14.16 11.88 42.73 5.19
604 4117 1.369321 CTTGGCTAGGATCGGAGGC 59.631 63.158 10.97 10.97 38.67 4.70
605 4118 1.369321 GCTTGGCTAGGATCGGAGG 59.631 63.158 0.00 0.00 0.00 4.30
606 4119 1.369321 GGCTTGGCTAGGATCGGAG 59.631 63.158 0.00 0.00 0.00 4.63
607 4120 2.498941 CGGCTTGGCTAGGATCGGA 61.499 63.158 0.00 0.00 0.00 4.55
608 4121 2.028125 TTCGGCTTGGCTAGGATCGG 62.028 60.000 0.00 0.00 0.00 4.18
609 4122 0.598680 CTTCGGCTTGGCTAGGATCG 60.599 60.000 0.00 0.00 0.00 3.69
610 4123 0.882484 GCTTCGGCTTGGCTAGGATC 60.882 60.000 0.00 0.00 38.08 3.36
611 4124 1.147153 GCTTCGGCTTGGCTAGGAT 59.853 57.895 0.00 0.00 38.08 3.24
612 4125 2.584608 GCTTCGGCTTGGCTAGGA 59.415 61.111 0.00 0.00 38.08 2.94
613 4126 2.514824 GGCTTCGGCTTGGCTAGG 60.515 66.667 0.00 0.00 41.44 3.02
614 4127 1.078143 AAGGCTTCGGCTTGGCTAG 60.078 57.895 0.00 0.00 46.51 3.42
615 4128 3.077907 AAGGCTTCGGCTTGGCTA 58.922 55.556 0.00 0.00 46.51 3.93
621 4134 2.047179 GAACGGAAGGCTTCGGCT 60.047 61.111 28.30 19.91 41.24 5.52
622 4135 3.125573 GGAACGGAAGGCTTCGGC 61.126 66.667 28.30 16.28 40.88 5.54
640 4153 0.666374 CGAACAAGTGGGTTTGGACC 59.334 55.000 0.00 0.00 45.75 4.46
641 4154 1.064952 CACGAACAAGTGGGTTTGGAC 59.935 52.381 0.00 0.00 38.40 4.02
642 4155 1.384525 CACGAACAAGTGGGTTTGGA 58.615 50.000 0.00 0.00 38.40 3.53
643 4156 3.936585 CACGAACAAGTGGGTTTGG 57.063 52.632 0.00 0.00 38.40 3.28
650 4163 2.146342 AGAAGATGCCACGAACAAGTG 58.854 47.619 0.00 0.00 41.53 3.16
651 4164 2.417719 GAGAAGATGCCACGAACAAGT 58.582 47.619 0.00 0.00 0.00 3.16
652 4165 1.734465 GGAGAAGATGCCACGAACAAG 59.266 52.381 0.00 0.00 0.00 3.16
653 4166 1.610624 GGGAGAAGATGCCACGAACAA 60.611 52.381 0.00 0.00 39.77 2.83
654 4167 0.036388 GGGAGAAGATGCCACGAACA 60.036 55.000 0.00 0.00 39.77 3.18
655 4168 0.036388 TGGGAGAAGATGCCACGAAC 60.036 55.000 0.00 0.00 45.95 3.95
656 4169 2.371784 TGGGAGAAGATGCCACGAA 58.628 52.632 0.00 0.00 45.95 3.85
657 4170 4.128580 TGGGAGAAGATGCCACGA 57.871 55.556 0.00 0.00 45.95 4.35
661 4174 6.418101 TGCTATAAATATGGGAGAAGATGCC 58.582 40.000 0.00 0.00 40.61 4.40
662 4175 6.038050 GCTGCTATAAATATGGGAGAAGATGC 59.962 42.308 9.03 0.00 35.21 3.91
663 4176 6.541641 GGCTGCTATAAATATGGGAGAAGATG 59.458 42.308 9.03 0.00 35.21 2.90
664 4177 6.631314 CGGCTGCTATAAATATGGGAGAAGAT 60.631 42.308 9.03 0.00 35.21 2.40
665 4178 5.337571 CGGCTGCTATAAATATGGGAGAAGA 60.338 44.000 9.03 0.00 35.21 2.87
666 4179 4.872691 CGGCTGCTATAAATATGGGAGAAG 59.127 45.833 9.03 0.00 35.21 2.85
667 4180 4.832248 CGGCTGCTATAAATATGGGAGAA 58.168 43.478 9.03 0.00 35.21 2.87
668 4181 3.369471 GCGGCTGCTATAAATATGGGAGA 60.369 47.826 11.21 0.00 35.21 3.71
669 4182 2.939103 GCGGCTGCTATAAATATGGGAG 59.061 50.000 11.21 1.72 36.08 4.30
670 4183 2.985896 GCGGCTGCTATAAATATGGGA 58.014 47.619 11.21 0.00 38.39 4.37
693 4206 4.785453 GGACCTTGGCCTGCTCGG 62.785 72.222 3.32 0.00 0.00 4.63
694 4207 3.551496 TTGGACCTTGGCCTGCTCG 62.551 63.158 3.32 0.00 0.00 5.03
695 4208 1.676967 CTTGGACCTTGGCCTGCTC 60.677 63.158 3.32 0.00 0.00 4.26
696 4209 2.134630 CTCTTGGACCTTGGCCTGCT 62.135 60.000 3.32 0.00 0.00 4.24
697 4210 1.676967 CTCTTGGACCTTGGCCTGC 60.677 63.158 3.32 0.00 0.00 4.85
698 4211 0.984230 TACTCTTGGACCTTGGCCTG 59.016 55.000 3.32 0.00 0.00 4.85
699 4212 1.280457 CTACTCTTGGACCTTGGCCT 58.720 55.000 3.32 0.00 0.00 5.19
700 4213 0.393132 GCTACTCTTGGACCTTGGCC 60.393 60.000 0.00 0.00 0.00 5.36
701 4214 0.393132 GGCTACTCTTGGACCTTGGC 60.393 60.000 0.00 0.00 0.00 4.52
702 4215 0.253327 GGGCTACTCTTGGACCTTGG 59.747 60.000 0.00 0.00 0.00 3.61
703 4216 0.984230 TGGGCTACTCTTGGACCTTG 59.016 55.000 0.00 0.00 0.00 3.61
704 4217 1.561542 CATGGGCTACTCTTGGACCTT 59.438 52.381 0.00 0.00 0.00 3.50
705 4218 1.207791 CATGGGCTACTCTTGGACCT 58.792 55.000 0.00 0.00 0.00 3.85
706 4219 0.181350 CCATGGGCTACTCTTGGACC 59.819 60.000 2.85 0.00 32.96 4.46
707 4220 0.912486 ACCATGGGCTACTCTTGGAC 59.088 55.000 18.09 0.00 34.64 4.02
708 4221 1.204146 GACCATGGGCTACTCTTGGA 58.796 55.000 18.09 0.00 34.64 3.53
709 4222 1.134280 CAGACCATGGGCTACTCTTGG 60.134 57.143 23.06 1.20 36.06 3.61
710 4223 1.134280 CCAGACCATGGGCTACTCTTG 60.134 57.143 23.06 7.65 46.36 3.02
711 4224 1.207791 CCAGACCATGGGCTACTCTT 58.792 55.000 23.06 0.00 46.36 2.85
712 4225 2.922162 CCAGACCATGGGCTACTCT 58.078 57.895 23.06 8.04 46.36 3.24
721 4234 1.075482 ACTGTTGGGCCAGACCATG 59.925 57.895 6.23 4.60 40.91 3.66
722 4235 1.075482 CACTGTTGGGCCAGACCAT 59.925 57.895 6.23 0.00 40.91 3.55
723 4236 2.515398 CACTGTTGGGCCAGACCA 59.485 61.111 6.23 4.32 42.05 4.02
724 4237 2.282462 CCACTGTTGGGCCAGACC 60.282 66.667 6.23 0.00 39.57 3.85
732 4245 3.352648 CATACCTTTACCCCACTGTTGG 58.647 50.000 0.00 0.00 43.50 3.77
733 4246 2.752903 GCATACCTTTACCCCACTGTTG 59.247 50.000 0.00 0.00 0.00 3.33
734 4247 2.647802 AGCATACCTTTACCCCACTGTT 59.352 45.455 0.00 0.00 0.00 3.16
735 4248 2.026262 CAGCATACCTTTACCCCACTGT 60.026 50.000 0.00 0.00 0.00 3.55
736 4249 2.238646 TCAGCATACCTTTACCCCACTG 59.761 50.000 0.00 0.00 0.00 3.66
737 4250 2.238898 GTCAGCATACCTTTACCCCACT 59.761 50.000 0.00 0.00 0.00 4.00
738 4251 2.026636 TGTCAGCATACCTTTACCCCAC 60.027 50.000 0.00 0.00 0.00 4.61
739 4252 2.026636 GTGTCAGCATACCTTTACCCCA 60.027 50.000 0.00 0.00 0.00 4.96
740 4253 2.026636 TGTGTCAGCATACCTTTACCCC 60.027 50.000 0.00 0.00 0.00 4.95
741 4254 3.343941 TGTGTCAGCATACCTTTACCC 57.656 47.619 0.00 0.00 0.00 3.69
742 4255 5.648092 AGAAATGTGTCAGCATACCTTTACC 59.352 40.000 0.00 0.00 0.00 2.85
743 4256 6.149474 ACAGAAATGTGTCAGCATACCTTTAC 59.851 38.462 0.00 0.00 0.00 2.01
744 4257 6.149308 CACAGAAATGTGTCAGCATACCTTTA 59.851 38.462 0.20 0.00 35.25 1.85
745 4258 5.048504 CACAGAAATGTGTCAGCATACCTTT 60.049 40.000 0.20 0.00 35.25 3.11
746 4259 4.456911 CACAGAAATGTGTCAGCATACCTT 59.543 41.667 0.20 0.00 35.25 3.50
747 4260 4.005650 CACAGAAATGTGTCAGCATACCT 58.994 43.478 0.20 0.00 35.25 3.08
748 4261 3.426695 GCACAGAAATGTGTCAGCATACC 60.427 47.826 9.86 0.00 41.53 2.73
749 4262 3.426695 GGCACAGAAATGTGTCAGCATAC 60.427 47.826 8.04 0.00 43.30 2.39
750 4263 2.749076 GGCACAGAAATGTGTCAGCATA 59.251 45.455 8.04 0.00 43.30 3.14
751 4264 1.542915 GGCACAGAAATGTGTCAGCAT 59.457 47.619 8.04 0.00 43.30 3.79
752 4265 0.953727 GGCACAGAAATGTGTCAGCA 59.046 50.000 8.04 0.00 43.30 4.41
753 4266 0.110056 CGGCACAGAAATGTGTCAGC 60.110 55.000 12.86 0.00 43.94 4.26
754 4267 1.511850 TCGGCACAGAAATGTGTCAG 58.488 50.000 12.86 6.23 43.94 3.51
755 4268 1.960417 TTCGGCACAGAAATGTGTCA 58.040 45.000 12.86 0.00 43.94 3.58
756 4269 3.243068 ACTTTTCGGCACAGAAATGTGTC 60.243 43.478 11.86 6.58 42.78 3.67
757 4270 2.687935 ACTTTTCGGCACAGAAATGTGT 59.312 40.909 11.86 3.83 42.78 3.72
758 4271 3.354089 ACTTTTCGGCACAGAAATGTG 57.646 42.857 11.86 4.03 42.78 3.21
759 4272 5.240623 TGATTACTTTTCGGCACAGAAATGT 59.759 36.000 15.29 15.29 44.84 2.71
790 4303 6.187727 AGTTTTTGACAGGAATACTCTCCA 57.812 37.500 0.00 0.00 38.02 3.86
824 4337 9.941325 TTCTTTACGGTAATACATTCCACTTTA 57.059 29.630 0.73 0.00 0.00 1.85
825 4338 8.851541 TTCTTTACGGTAATACATTCCACTTT 57.148 30.769 0.73 0.00 0.00 2.66
916 4436 0.318762 GCCTCACTCTTATAGGGGCG 59.681 60.000 0.00 0.00 32.60 6.13
934 4455 4.669206 TCAGATCAGATTTCTCTCAGGC 57.331 45.455 0.00 0.00 0.00 4.85
964 4485 5.866633 ACTTACTTCTCAAGAGAATTCGCTG 59.133 40.000 12.75 7.28 45.40 5.18
986 4507 7.120051 CCATGGCTCCATATAGTAGTACTACT 58.880 42.308 32.39 32.39 40.89 2.57
987 4508 6.321690 CCCATGGCTCCATATAGTAGTACTAC 59.678 46.154 23.03 23.03 31.82 2.73
995 4516 3.567375 TCTCCCATGGCTCCATATAGT 57.433 47.619 6.09 0.00 34.91 2.12
1005 4526 0.610785 TCCCGTTTTTCTCCCATGGC 60.611 55.000 6.09 0.00 0.00 4.40
1016 4537 2.432628 CGCTCTCGCTCCCGTTTT 60.433 61.111 0.00 0.00 35.54 2.43
1079 4600 0.755079 CTCGCCCAGGAGATCATCAA 59.245 55.000 0.00 0.00 36.08 2.57
1080 4601 0.106015 TCTCGCCCAGGAGATCATCA 60.106 55.000 0.00 0.00 38.12 3.07
1177 4698 2.272146 GCGGAAGATGGCTGGGAA 59.728 61.111 0.00 0.00 0.00 3.97
1780 5304 1.734477 CCTCGTCGTCCTTGCAGTG 60.734 63.158 0.00 0.00 0.00 3.66
1799 5323 1.340308 CCATGTCCAGCACCAAGATCA 60.340 52.381 0.00 0.00 0.00 2.92
2127 5651 5.009010 CAGCTTTGTGGTGTTCAGATTTAGT 59.991 40.000 0.00 0.00 39.17 2.24
2224 5748 0.913924 TCATCATCTGGAGCAGGCAA 59.086 50.000 0.00 0.00 31.51 4.52
2254 5779 7.047891 CCTACTTCATTGTATCAAGCACCTTA 58.952 38.462 0.00 0.00 0.00 2.69
2259 5784 8.486210 AGATTACCTACTTCATTGTATCAAGCA 58.514 33.333 0.00 0.00 0.00 3.91
2273 5798 7.572861 ACATATCAAAGGGGAGATTACCTACTT 59.427 37.037 0.00 0.00 35.64 2.24
2396 5921 7.277981 CGAACTACTTTATCATGTACTGGCTTT 59.722 37.037 0.00 0.00 0.00 3.51
2440 5965 6.202937 CAACAAAATTTGTAAGCACCGAGTA 58.797 36.000 12.11 0.00 44.59 2.59
2442 5967 4.444056 CCAACAAAATTTGTAAGCACCGAG 59.556 41.667 12.11 0.00 44.59 4.63
2521 6046 6.133356 TGTTGAGTTCTAGGGAAATTGGTTT 58.867 36.000 0.00 0.00 32.81 3.27
2671 6214 8.397906 TGAGAAAACTGAACAATTACAAGTCAG 58.602 33.333 0.00 0.00 0.00 3.51
2703 6247 6.075918 GCATCGTTGATTCTAGCAATATGTG 58.924 40.000 0.00 0.00 30.54 3.21
2713 6257 6.308371 TGTATACTCGCATCGTTGATTCTA 57.692 37.500 4.17 0.00 0.00 2.10
2726 6270 8.583810 TTTTCACCTACAATATGTATACTCGC 57.416 34.615 4.17 0.00 31.66 5.03
2826 6395 4.911610 CAGCGTTTAAGAATTCAGGTGTTG 59.088 41.667 8.44 0.00 0.00 3.33
2847 6416 2.951642 TCCTGAAAACCAACTGAAGCAG 59.048 45.455 0.00 0.00 37.52 4.24
2962 7086 3.058450 CGCATTCTGCAAAACCATTCAA 58.942 40.909 0.00 0.00 45.36 2.69
3062 7187 7.160726 GGCATGGGTATATAAATGCATGTTTT 58.839 34.615 19.85 0.00 45.72 2.43
3066 7191 5.419788 ACTGGCATGGGTATATAAATGCATG 59.580 40.000 19.85 15.48 45.72 4.06
3077 7202 1.595311 TCTGGAACTGGCATGGGTAT 58.405 50.000 0.00 0.00 0.00 2.73
3108 7233 5.719173 CCACCCACCACAAAATATAACAAG 58.281 41.667 0.00 0.00 0.00 3.16
3162 7287 7.542025 ACTTGACCTGAAATGCAAAGATTATC 58.458 34.615 0.00 0.00 0.00 1.75
3225 7350 0.107456 ATGACGCTCTTATGCCCCAG 59.893 55.000 0.00 0.00 0.00 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.