Multiple sequence alignment - TraesCS3B01G298800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G298800 chr3B 100.000 2856 0 0 1 2856 479577794 479574939 0.000000e+00 5275.0
1 TraesCS3B01G298800 chr3A 89.188 2340 113 53 1 2244 489751152 489748857 0.000000e+00 2791.0
2 TraesCS3B01G298800 chr3A 89.720 214 22 0 2635 2848 1783136 1783349 1.010000e-69 274.0
3 TraesCS3B01G298800 chr3A 91.176 68 3 2 2085 2152 432858592 432858528 3.920000e-14 89.8
4 TraesCS3B01G298800 chr3A 96.970 33 1 0 2115 2147 691672280 691672312 3.980000e-04 56.5
5 TraesCS3B01G298800 chr3D 89.026 2105 89 57 1 2048 368226773 368224754 0.000000e+00 2477.0
6 TraesCS3B01G298800 chr3D 89.080 348 33 5 2244 2590 301220666 301220323 7.310000e-116 427.0
7 TraesCS3B01G298800 chr3D 89.640 222 23 0 2635 2856 338546457 338546236 1.680000e-72 283.0
8 TraesCS3B01G298800 chr3D 92.000 50 4 0 2200 2249 368215118 368215069 1.420000e-08 71.3
9 TraesCS3B01G298800 chr4D 91.214 387 29 2 2246 2628 464229396 464229011 3.260000e-144 521.0
10 TraesCS3B01G298800 chr4D 88.739 222 25 0 2635 2856 431517424 431517203 3.630000e-69 272.0
11 TraesCS3B01G298800 chr7B 89.446 379 39 1 2250 2628 510596384 510596007 7.160000e-131 477.0
12 TraesCS3B01G298800 chr6A 87.927 381 39 5 2246 2625 97626677 97627051 2.610000e-120 442.0
13 TraesCS3B01G298800 chr6A 84.270 89 8 4 2082 2167 566867 566782 6.560000e-12 82.4
14 TraesCS3B01G298800 chr5D 86.856 388 40 6 2248 2634 547769725 547769348 9.460000e-115 424.0
15 TraesCS3B01G298800 chr5D 90.090 222 22 0 2635 2856 334309872 334309651 3.600000e-74 289.0
16 TraesCS3B01G298800 chr5D 89.189 222 24 0 2635 2856 1726464 1726243 7.790000e-71 278.0
17 TraesCS3B01G298800 chr5D 88.739 222 25 0 2635 2856 118067504 118067283 3.630000e-69 272.0
18 TraesCS3B01G298800 chr2B 86.494 385 43 3 2248 2628 617935635 617935256 5.690000e-112 414.0
19 TraesCS3B01G298800 chr2B 85.677 384 49 2 2245 2628 743925756 743925379 1.590000e-107 399.0
20 TraesCS3B01G298800 chr2B 85.753 372 43 6 2245 2612 744057037 744056672 4.460000e-103 385.0
21 TraesCS3B01G298800 chr5B 83.733 375 50 5 2268 2634 466739361 466739732 7.580000e-91 344.0
22 TraesCS3B01G298800 chr5B 88.288 222 26 0 2635 2856 281147956 281148177 1.690000e-67 267.0
23 TraesCS3B01G298800 chr4A 90.783 217 19 1 2635 2850 638765722 638765938 3.600000e-74 289.0
24 TraesCS3B01G298800 chr6D 88.739 222 24 1 2635 2856 346460663 346460443 1.300000e-68 270.0
25 TraesCS3B01G298800 chr6D 85.507 69 7 2 2082 2150 2327252 2327317 5.110000e-08 69.4
26 TraesCS3B01G298800 chr6B 82.558 86 10 4 2082 2166 3622271 3622190 1.420000e-08 71.3
27 TraesCS3B01G298800 chr1D 84.615 65 7 2 2088 2152 49427604 49427665 8.540000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G298800 chr3B 479574939 479577794 2855 True 5275 5275 100.000 1 2856 1 chr3B.!!$R1 2855
1 TraesCS3B01G298800 chr3A 489748857 489751152 2295 True 2791 2791 89.188 1 2244 1 chr3A.!!$R2 2243
2 TraesCS3B01G298800 chr3D 368224754 368226773 2019 True 2477 2477 89.026 1 2048 1 chr3D.!!$R4 2047

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
260 275 0.31702 GTTTGCTGAACTGTGACGCC 60.317 55.0 0.0 0.0 35.31 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2091 2216 0.179018 GTGAGCCGGGGCATAGAAAT 60.179 55.0 12.97 0.0 44.88 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 106 5.742453 CGTACGTGCAACTATTTATCTCTGT 59.258 40.000 7.22 0.00 31.75 3.41
96 109 6.398918 ACGTGCAACTATTTATCTCTGTTCT 58.601 36.000 0.00 0.00 31.75 3.01
99 112 5.586243 TGCAACTATTTATCTCTGTTCTGCC 59.414 40.000 0.00 0.00 0.00 4.85
107 120 0.809385 CTCTGTTCTGCCTGGCATTG 59.191 55.000 23.64 11.95 38.13 2.82
108 121 1.214589 CTGTTCTGCCTGGCATTGC 59.785 57.895 23.64 14.78 38.13 3.56
119 132 3.514645 CCTGGCATTGCTTATTCACAAC 58.485 45.455 8.82 0.00 0.00 3.32
123 136 3.307782 GGCATTGCTTATTCACAACATGC 59.692 43.478 8.82 0.00 33.22 4.06
142 155 2.225467 GCAGAGATTAATGGGCTGTCC 58.775 52.381 0.00 0.00 0.00 4.02
151 164 2.048601 TGGGCTGTCCACATTTTGC 58.951 52.632 0.00 0.00 41.46 3.68
229 243 8.459911 TGACCGTGAAAGATATATGTAGAAGA 57.540 34.615 0.00 0.00 0.00 2.87
230 244 8.568794 TGACCGTGAAAGATATATGTAGAAGAG 58.431 37.037 0.00 0.00 0.00 2.85
231 245 7.887381 ACCGTGAAAGATATATGTAGAAGAGG 58.113 38.462 0.00 0.00 0.00 3.69
260 275 0.317020 GTTTGCTGAACTGTGACGCC 60.317 55.000 0.00 0.00 35.31 5.68
314 332 5.989551 AAGCTGCAAAATTACAAACTTGG 57.010 34.783 1.02 0.00 0.00 3.61
318 336 5.000012 TGCAAAATTACAAACTTGGACGT 58.000 34.783 0.00 0.00 0.00 4.34
332 350 1.202348 TGGACGTGTAGACTGATGCAG 59.798 52.381 0.00 0.00 37.52 4.41
335 353 1.275505 CGTGTAGACTGATGCAGCAG 58.724 55.000 29.47 29.47 41.63 4.24
378 419 2.467838 CAGCGATCATGTGAGGTAGTG 58.532 52.381 0.00 0.00 0.00 2.74
380 421 1.539065 GCGATCATGTGAGGTAGTGGG 60.539 57.143 0.00 0.00 0.00 4.61
381 422 1.757118 CGATCATGTGAGGTAGTGGGT 59.243 52.381 0.00 0.00 0.00 4.51
401 451 1.265568 GTGCTTCATCAATTGCTGCG 58.734 50.000 4.37 0.12 0.00 5.18
405 455 2.727777 CTTCATCAATTGCTGCGGATG 58.272 47.619 4.37 13.65 38.73 3.51
406 456 1.026584 TCATCAATTGCTGCGGATGG 58.973 50.000 17.34 4.39 38.11 3.51
441 492 4.764172 TGTAAAATTGCAGCAAACTTGGT 58.236 34.783 12.97 0.00 39.91 3.67
449 500 2.650608 CAGCAAACTTGGTCGTTAAGC 58.349 47.619 0.00 0.00 36.65 3.09
521 573 4.398988 TCACTTCATTAATGTGGGTCATGC 59.601 41.667 14.97 0.00 36.81 4.06
647 707 3.428413 AGTAATTACCACCGCCACTTT 57.572 42.857 12.05 0.00 0.00 2.66
713 773 2.066262 CCAGCAAAGGTGTAGTACGTG 58.934 52.381 0.00 0.00 0.00 4.49
714 774 1.459592 CAGCAAAGGTGTAGTACGTGC 59.540 52.381 0.00 0.00 34.37 5.34
715 775 0.794473 GCAAAGGTGTAGTACGTGCC 59.206 55.000 0.00 0.00 0.00 5.01
716 776 1.874739 GCAAAGGTGTAGTACGTGCCA 60.875 52.381 0.00 0.00 0.00 4.92
717 777 1.796459 CAAAGGTGTAGTACGTGCCAC 59.204 52.381 0.00 0.88 0.00 5.01
791 851 1.302366 ACCACGCATGCTATGTCATG 58.698 50.000 17.13 0.00 44.93 3.07
798 858 2.159037 GCATGCTATGTCATGTCCATCG 59.841 50.000 11.37 1.06 44.20 3.84
876 948 1.443802 CGAGGTTGCTTCCTTCCTTC 58.556 55.000 2.13 0.00 38.02 3.46
886 958 1.529744 TCCTTCCTTCCTTTGGTGGT 58.470 50.000 0.00 0.00 0.00 4.16
904 978 2.412421 GTAGTATTCGTGCTACCCGG 57.588 55.000 0.00 0.00 33.41 5.73
905 979 1.678101 GTAGTATTCGTGCTACCCGGT 59.322 52.381 0.00 0.00 33.41 5.28
906 980 2.057137 AGTATTCGTGCTACCCGGTA 57.943 50.000 0.00 0.00 0.00 4.02
977 1053 3.594134 AGATTGTGCGGAGAAGAAGAAG 58.406 45.455 0.00 0.00 0.00 2.85
978 1054 3.259374 AGATTGTGCGGAGAAGAAGAAGA 59.741 43.478 0.00 0.00 0.00 2.87
979 1055 3.469008 TTGTGCGGAGAAGAAGAAGAA 57.531 42.857 0.00 0.00 0.00 2.52
983 1059 2.224281 TGCGGAGAAGAAGAAGAAGCAA 60.224 45.455 0.00 0.00 0.00 3.91
997 1073 2.159114 AGAAGCAAAGAGAGGATCGAGC 60.159 50.000 0.00 0.00 42.67 5.03
1208 1296 1.698874 AATTCCCCATCTCCCCTTGT 58.301 50.000 0.00 0.00 0.00 3.16
1209 1297 0.929244 ATTCCCCATCTCCCCTTGTG 59.071 55.000 0.00 0.00 0.00 3.33
1235 1323 4.913335 ATAACGATTCTAACTCGGCTCA 57.087 40.909 0.00 0.00 40.37 4.26
1248 1336 2.048127 GCTCACGGCCGTTTCTCT 60.048 61.111 32.11 1.81 34.27 3.10
1258 1346 1.517257 CGTTTCTCTGAGCGCGGAT 60.517 57.895 8.83 0.00 0.00 4.18
1872 1963 1.811266 GAGCTTTGCCGCATCGAGA 60.811 57.895 0.00 0.00 0.00 4.04
1881 1977 2.761195 CGCATCGAGAGTGTCCGGA 61.761 63.158 0.00 0.00 0.00 5.14
1883 1979 1.062685 CATCGAGAGTGTCCGGACG 59.937 63.158 28.70 16.35 0.00 4.79
1957 2058 2.661675 CAGTGGTAGAAACGACGACATG 59.338 50.000 0.00 0.00 39.16 3.21
2033 2135 4.629634 CGCATGATTTATAGCCGGATTACA 59.370 41.667 5.05 0.00 0.00 2.41
2060 2162 9.567776 TTACTTGTTTCTGTGGAATTTCATCTA 57.432 29.630 0.00 0.00 0.00 1.98
2103 2228 4.843728 TCGAATATCCATTTCTATGCCCC 58.156 43.478 0.00 0.00 0.00 5.80
2104 2229 3.623060 CGAATATCCATTTCTATGCCCCG 59.377 47.826 0.00 0.00 0.00 5.73
2105 2230 3.652057 ATATCCATTTCTATGCCCCGG 57.348 47.619 0.00 0.00 0.00 5.73
2110 2235 0.179018 ATTTCTATGCCCCGGCTCAC 60.179 55.000 7.35 0.00 42.51 3.51
2111 2236 2.265467 TTTCTATGCCCCGGCTCACC 62.265 60.000 7.35 0.00 42.51 4.02
2113 2238 3.466791 CTATGCCCCGGCTCACCTG 62.467 68.421 7.35 0.00 42.51 4.00
2204 2329 8.280497 ACTGTGTACTGTTTAAATCGCTTTAAG 58.720 33.333 4.56 0.00 37.92 1.85
2225 2350 4.504858 AGGTATCAAACTAAGCCAAGACG 58.495 43.478 0.00 0.00 0.00 4.18
2244 2369 0.658244 GTGCTCACGTGCATGTGTTG 60.658 55.000 32.41 26.35 45.23 3.33
2245 2370 1.094650 TGCTCACGTGCATGTGTTGT 61.095 50.000 32.41 0.00 40.74 3.32
2246 2371 0.029300 GCTCACGTGCATGTGTTGTT 59.971 50.000 32.41 0.00 40.74 2.83
2247 2372 1.262950 GCTCACGTGCATGTGTTGTTA 59.737 47.619 32.41 16.20 40.74 2.41
2248 2373 2.662791 GCTCACGTGCATGTGTTGTTAG 60.663 50.000 32.41 24.04 40.74 2.34
2249 2374 2.799978 CTCACGTGCATGTGTTGTTAGA 59.200 45.455 32.41 14.89 40.74 2.10
2250 2375 2.799978 TCACGTGCATGTGTTGTTAGAG 59.200 45.455 32.41 9.55 40.74 2.43
2251 2376 1.531149 ACGTGCATGTGTTGTTAGAGC 59.469 47.619 11.65 0.00 0.00 4.09
2252 2377 1.530720 CGTGCATGTGTTGTTAGAGCA 59.469 47.619 0.00 0.00 0.00 4.26
2253 2378 2.160219 CGTGCATGTGTTGTTAGAGCAT 59.840 45.455 0.00 0.00 32.75 3.79
2254 2379 3.725895 CGTGCATGTGTTGTTAGAGCATC 60.726 47.826 0.00 0.00 32.75 3.91
2267 2392 1.960417 GAGCATCTCTAGCAAACCCC 58.040 55.000 0.00 0.00 0.00 4.95
2268 2393 1.488393 GAGCATCTCTAGCAAACCCCT 59.512 52.381 0.00 0.00 0.00 4.79
2269 2394 1.918957 AGCATCTCTAGCAAACCCCTT 59.081 47.619 0.00 0.00 0.00 3.95
2270 2395 3.115390 AGCATCTCTAGCAAACCCCTTA 58.885 45.455 0.00 0.00 0.00 2.69
2271 2396 3.523564 AGCATCTCTAGCAAACCCCTTAA 59.476 43.478 0.00 0.00 0.00 1.85
2272 2397 4.018415 AGCATCTCTAGCAAACCCCTTAAA 60.018 41.667 0.00 0.00 0.00 1.52
2273 2398 4.096532 GCATCTCTAGCAAACCCCTTAAAC 59.903 45.833 0.00 0.00 0.00 2.01
2274 2399 4.296621 TCTCTAGCAAACCCCTTAAACC 57.703 45.455 0.00 0.00 0.00 3.27
2275 2400 3.007635 CTCTAGCAAACCCCTTAAACCG 58.992 50.000 0.00 0.00 0.00 4.44
2276 2401 1.471287 CTAGCAAACCCCTTAAACCGC 59.529 52.381 0.00 0.00 0.00 5.68
2277 2402 1.081041 GCAAACCCCTTAAACCGCG 60.081 57.895 0.00 0.00 0.00 6.46
2278 2403 1.582461 CAAACCCCTTAAACCGCGG 59.418 57.895 26.86 26.86 0.00 6.46
2279 2404 0.890090 CAAACCCCTTAAACCGCGGA 60.890 55.000 35.90 6.51 0.00 5.54
2280 2405 0.178995 AAACCCCTTAAACCGCGGAA 60.179 50.000 35.90 15.57 0.00 4.30
2281 2406 0.890542 AACCCCTTAAACCGCGGAAC 60.891 55.000 35.90 0.00 0.00 3.62
2282 2407 1.002990 CCCCTTAAACCGCGGAACT 60.003 57.895 35.90 17.75 0.00 3.01
2283 2408 1.303091 CCCCTTAAACCGCGGAACTG 61.303 60.000 35.90 16.76 0.00 3.16
2284 2409 0.320946 CCCTTAAACCGCGGAACTGA 60.321 55.000 35.90 12.37 0.00 3.41
2285 2410 1.515081 CCTTAAACCGCGGAACTGAA 58.485 50.000 35.90 16.40 0.00 3.02
2286 2411 1.874872 CCTTAAACCGCGGAACTGAAA 59.125 47.619 35.90 15.11 0.00 2.69
2287 2412 2.291190 CCTTAAACCGCGGAACTGAAAA 59.709 45.455 35.90 14.05 0.00 2.29
2288 2413 3.294102 CTTAAACCGCGGAACTGAAAAC 58.706 45.455 35.90 0.00 0.00 2.43
2289 2414 0.028374 AAACCGCGGAACTGAAAACG 59.972 50.000 35.90 0.00 0.00 3.60
2292 2417 2.127383 GCGGAACTGAAAACGCGG 60.127 61.111 12.47 0.00 42.66 6.46
2293 2418 2.888998 GCGGAACTGAAAACGCGGT 61.889 57.895 12.47 0.00 42.66 5.68
2294 2419 1.559149 GCGGAACTGAAAACGCGGTA 61.559 55.000 12.47 0.00 42.66 4.02
2295 2420 1.073177 CGGAACTGAAAACGCGGTAT 58.927 50.000 12.47 0.00 0.00 2.73
2296 2421 1.461897 CGGAACTGAAAACGCGGTATT 59.538 47.619 12.47 1.27 0.00 1.89
2297 2422 2.473376 CGGAACTGAAAACGCGGTATTC 60.473 50.000 12.47 12.26 0.00 1.75
2298 2423 2.481185 GGAACTGAAAACGCGGTATTCA 59.519 45.455 12.47 16.22 0.00 2.57
2301 2426 3.806316 CTGAAAACGCGGTATTCAGTT 57.194 42.857 27.98 9.02 43.11 3.16
2302 2427 4.141855 CTGAAAACGCGGTATTCAGTTT 57.858 40.909 27.98 8.37 43.11 2.66
2303 2428 3.879427 TGAAAACGCGGTATTCAGTTTG 58.121 40.909 12.47 0.00 36.97 2.93
2304 2429 2.325509 AAACGCGGTATTCAGTTTGC 57.674 45.000 12.47 0.00 35.74 3.68
2305 2430 4.643675 CGCGGTATTCAGTTTGCG 57.356 55.556 0.00 0.00 39.57 4.85
2306 2431 1.060308 CGCGGTATTCAGTTTGCGG 59.940 57.895 0.00 0.00 41.69 5.69
2307 2432 1.355796 CGCGGTATTCAGTTTGCGGA 61.356 55.000 0.00 0.00 41.69 5.54
2308 2433 0.800012 GCGGTATTCAGTTTGCGGAA 59.200 50.000 0.00 0.00 33.64 4.30
2309 2434 1.198178 GCGGTATTCAGTTTGCGGAAA 59.802 47.619 0.00 0.00 32.91 3.13
2310 2435 2.350964 GCGGTATTCAGTTTGCGGAAAA 60.351 45.455 2.79 0.00 32.91 2.29
2322 2447 5.733299 GTTTGCGGAAAACACATTTTAAGG 58.267 37.500 2.79 0.00 46.30 2.69
2323 2448 3.983741 TGCGGAAAACACATTTTAAGGG 58.016 40.909 0.00 0.00 38.17 3.95
2324 2449 3.385111 TGCGGAAAACACATTTTAAGGGT 59.615 39.130 0.00 0.00 38.17 4.34
2325 2450 3.985279 GCGGAAAACACATTTTAAGGGTC 59.015 43.478 0.00 0.00 38.17 4.46
2326 2451 4.223659 CGGAAAACACATTTTAAGGGTCG 58.776 43.478 0.00 0.00 38.17 4.79
2327 2452 4.552355 GGAAAACACATTTTAAGGGTCGG 58.448 43.478 0.00 0.00 38.17 4.79
2328 2453 4.038282 GGAAAACACATTTTAAGGGTCGGT 59.962 41.667 0.00 0.00 38.17 4.69
2329 2454 5.452216 GGAAAACACATTTTAAGGGTCGGTT 60.452 40.000 0.00 0.00 38.17 4.44
2330 2455 5.601583 AAACACATTTTAAGGGTCGGTTT 57.398 34.783 0.00 0.00 0.00 3.27
2331 2456 4.577834 ACACATTTTAAGGGTCGGTTTG 57.422 40.909 0.00 0.00 0.00 2.93
2332 2457 4.208746 ACACATTTTAAGGGTCGGTTTGA 58.791 39.130 0.00 0.00 0.00 2.69
2333 2458 4.277423 ACACATTTTAAGGGTCGGTTTGAG 59.723 41.667 0.00 0.00 0.00 3.02
2334 2459 3.254903 ACATTTTAAGGGTCGGTTTGAGC 59.745 43.478 0.00 0.00 44.49 4.26
2335 2460 2.943036 TTTAAGGGTCGGTTTGAGCT 57.057 45.000 0.00 0.00 44.62 4.09
2336 2461 2.178912 TTAAGGGTCGGTTTGAGCTG 57.821 50.000 0.00 0.00 44.62 4.24
2337 2462 0.321298 TAAGGGTCGGTTTGAGCTGC 60.321 55.000 0.00 0.00 44.62 5.25
2338 2463 3.423154 GGGTCGGTTTGAGCTGCG 61.423 66.667 0.00 0.00 44.62 5.18
2339 2464 3.423154 GGTCGGTTTGAGCTGCGG 61.423 66.667 0.00 0.00 41.93 5.69
2340 2465 4.090057 GTCGGTTTGAGCTGCGGC 62.090 66.667 10.33 10.33 39.06 6.53
2344 2469 3.353836 GTTTGAGCTGCGGCCGAA 61.354 61.111 33.48 20.72 39.73 4.30
2345 2470 3.353836 TTTGAGCTGCGGCCGAAC 61.354 61.111 33.48 17.39 39.73 3.95
2346 2471 4.617520 TTGAGCTGCGGCCGAACA 62.618 61.111 33.48 18.03 39.73 3.18
2348 2473 4.742201 GAGCTGCGGCCGAACAGA 62.742 66.667 33.48 5.10 39.73 3.41
2354 2479 4.016706 CGGCCGAACAGACCCCTT 62.017 66.667 24.07 0.00 0.00 3.95
2355 2480 2.652095 CGGCCGAACAGACCCCTTA 61.652 63.158 24.07 0.00 0.00 2.69
2356 2481 1.681076 GGCCGAACAGACCCCTTAA 59.319 57.895 0.00 0.00 0.00 1.85
2357 2482 0.037160 GGCCGAACAGACCCCTTAAA 59.963 55.000 0.00 0.00 0.00 1.52
2358 2483 1.162698 GCCGAACAGACCCCTTAAAC 58.837 55.000 0.00 0.00 0.00 2.01
2359 2484 1.271217 GCCGAACAGACCCCTTAAACT 60.271 52.381 0.00 0.00 0.00 2.66
2360 2485 2.027837 GCCGAACAGACCCCTTAAACTA 60.028 50.000 0.00 0.00 0.00 2.24
2361 2486 3.858247 CCGAACAGACCCCTTAAACTAG 58.142 50.000 0.00 0.00 0.00 2.57
2362 2487 3.369157 CCGAACAGACCCCTTAAACTAGG 60.369 52.174 0.00 0.00 34.92 3.02
2363 2488 3.512724 CGAACAGACCCCTTAAACTAGGA 59.487 47.826 0.00 0.00 37.50 2.94
2364 2489 4.620097 CGAACAGACCCCTTAAACTAGGAC 60.620 50.000 0.00 0.00 37.50 3.85
2365 2490 4.143406 ACAGACCCCTTAAACTAGGACT 57.857 45.455 0.00 0.00 37.50 3.85
2366 2491 5.280998 ACAGACCCCTTAAACTAGGACTA 57.719 43.478 0.00 0.00 37.50 2.59
2367 2492 5.851418 ACAGACCCCTTAAACTAGGACTAT 58.149 41.667 0.00 0.00 37.50 2.12
2368 2493 6.989894 ACAGACCCCTTAAACTAGGACTATA 58.010 40.000 0.00 0.00 37.50 1.31
2369 2494 7.425003 ACAGACCCCTTAAACTAGGACTATAA 58.575 38.462 0.00 0.00 37.50 0.98
2370 2495 7.902941 ACAGACCCCTTAAACTAGGACTATAAA 59.097 37.037 0.00 0.00 37.50 1.40
2371 2496 8.765517 CAGACCCCTTAAACTAGGACTATAAAA 58.234 37.037 0.00 0.00 37.50 1.52
2372 2497 8.766476 AGACCCCTTAAACTAGGACTATAAAAC 58.234 37.037 0.00 0.00 37.50 2.43
2373 2498 7.865820 ACCCCTTAAACTAGGACTATAAAACC 58.134 38.462 0.00 0.00 37.50 3.27
2374 2499 6.988580 CCCCTTAAACTAGGACTATAAAACCG 59.011 42.308 0.00 0.00 37.50 4.44
2375 2500 7.147672 CCCCTTAAACTAGGACTATAAAACCGA 60.148 40.741 0.00 0.00 37.50 4.69
2376 2501 8.260114 CCCTTAAACTAGGACTATAAAACCGAA 58.740 37.037 0.00 0.00 37.50 4.30
2377 2502 9.828039 CCTTAAACTAGGACTATAAAACCGAAT 57.172 33.333 0.00 0.00 37.50 3.34
2397 2522 9.877178 ACCGAATATTCATGTATATTCTTCCTC 57.123 33.333 28.15 12.97 41.86 3.71
2398 2523 9.875691 CCGAATATTCATGTATATTCTTCCTCA 57.124 33.333 28.15 0.00 41.86 3.86
2402 2527 9.862371 ATATTCATGTATATTCTTCCTCACGTC 57.138 33.333 0.00 0.00 0.00 4.34
2403 2528 6.961360 TCATGTATATTCTTCCTCACGTCT 57.039 37.500 0.00 0.00 0.00 4.18
2404 2529 7.348080 TCATGTATATTCTTCCTCACGTCTT 57.652 36.000 0.00 0.00 0.00 3.01
2405 2530 7.426410 TCATGTATATTCTTCCTCACGTCTTC 58.574 38.462 0.00 0.00 0.00 2.87
2406 2531 7.285629 TCATGTATATTCTTCCTCACGTCTTCT 59.714 37.037 0.00 0.00 0.00 2.85
2407 2532 7.406031 TGTATATTCTTCCTCACGTCTTCTT 57.594 36.000 0.00 0.00 0.00 2.52
2408 2533 7.481642 TGTATATTCTTCCTCACGTCTTCTTC 58.518 38.462 0.00 0.00 0.00 2.87
2409 2534 6.783708 ATATTCTTCCTCACGTCTTCTTCT 57.216 37.500 0.00 0.00 0.00 2.85
2410 2535 4.939052 TTCTTCCTCACGTCTTCTTCTT 57.061 40.909 0.00 0.00 0.00 2.52
2411 2536 4.506886 TCTTCCTCACGTCTTCTTCTTC 57.493 45.455 0.00 0.00 0.00 2.87
2412 2537 3.256136 TCTTCCTCACGTCTTCTTCTTCC 59.744 47.826 0.00 0.00 0.00 3.46
2413 2538 2.877866 TCCTCACGTCTTCTTCTTCCT 58.122 47.619 0.00 0.00 0.00 3.36
2414 2539 2.820787 TCCTCACGTCTTCTTCTTCCTC 59.179 50.000 0.00 0.00 0.00 3.71
2415 2540 2.823154 CCTCACGTCTTCTTCTTCCTCT 59.177 50.000 0.00 0.00 0.00 3.69
2416 2541 3.119637 CCTCACGTCTTCTTCTTCCTCTC 60.120 52.174 0.00 0.00 0.00 3.20
2417 2542 3.487372 TCACGTCTTCTTCTTCCTCTCA 58.513 45.455 0.00 0.00 0.00 3.27
2418 2543 4.082845 TCACGTCTTCTTCTTCCTCTCAT 58.917 43.478 0.00 0.00 0.00 2.90
2419 2544 4.156922 TCACGTCTTCTTCTTCCTCTCATC 59.843 45.833 0.00 0.00 0.00 2.92
2420 2545 3.445805 ACGTCTTCTTCTTCCTCTCATCC 59.554 47.826 0.00 0.00 0.00 3.51
2421 2546 3.488384 CGTCTTCTTCTTCCTCTCATCCG 60.488 52.174 0.00 0.00 0.00 4.18
2422 2547 3.445805 GTCTTCTTCTTCCTCTCATCCGT 59.554 47.826 0.00 0.00 0.00 4.69
2423 2548 3.445450 TCTTCTTCTTCCTCTCATCCGTG 59.555 47.826 0.00 0.00 0.00 4.94
2424 2549 2.808919 TCTTCTTCCTCTCATCCGTGT 58.191 47.619 0.00 0.00 0.00 4.49
2425 2550 3.165875 TCTTCTTCCTCTCATCCGTGTT 58.834 45.455 0.00 0.00 0.00 3.32
2426 2551 3.193691 TCTTCTTCCTCTCATCCGTGTTC 59.806 47.826 0.00 0.00 0.00 3.18
2427 2552 2.525368 TCTTCCTCTCATCCGTGTTCA 58.475 47.619 0.00 0.00 0.00 3.18
2428 2553 3.099905 TCTTCCTCTCATCCGTGTTCAT 58.900 45.455 0.00 0.00 0.00 2.57
2429 2554 4.278310 TCTTCCTCTCATCCGTGTTCATA 58.722 43.478 0.00 0.00 0.00 2.15
2430 2555 4.339530 TCTTCCTCTCATCCGTGTTCATAG 59.660 45.833 0.00 0.00 0.00 2.23
2431 2556 3.632333 TCCTCTCATCCGTGTTCATAGT 58.368 45.455 0.00 0.00 0.00 2.12
2432 2557 3.632604 TCCTCTCATCCGTGTTCATAGTC 59.367 47.826 0.00 0.00 0.00 2.59
2433 2558 3.381590 CCTCTCATCCGTGTTCATAGTCA 59.618 47.826 0.00 0.00 0.00 3.41
2434 2559 4.498850 CCTCTCATCCGTGTTCATAGTCAG 60.499 50.000 0.00 0.00 0.00 3.51
2435 2560 3.119291 CTCATCCGTGTTCATAGTCAGC 58.881 50.000 0.00 0.00 0.00 4.26
2436 2561 2.159099 TCATCCGTGTTCATAGTCAGCC 60.159 50.000 0.00 0.00 0.00 4.85
2437 2562 0.535335 TCCGTGTTCATAGTCAGCCC 59.465 55.000 0.00 0.00 0.00 5.19
2438 2563 0.462047 CCGTGTTCATAGTCAGCCCC 60.462 60.000 0.00 0.00 0.00 5.80
2439 2564 0.462047 CGTGTTCATAGTCAGCCCCC 60.462 60.000 0.00 0.00 0.00 5.40
2440 2565 0.462047 GTGTTCATAGTCAGCCCCCG 60.462 60.000 0.00 0.00 0.00 5.73
2441 2566 0.907704 TGTTCATAGTCAGCCCCCGT 60.908 55.000 0.00 0.00 0.00 5.28
2442 2567 0.179081 GTTCATAGTCAGCCCCCGTC 60.179 60.000 0.00 0.00 0.00 4.79
2443 2568 0.616395 TTCATAGTCAGCCCCCGTCA 60.616 55.000 0.00 0.00 0.00 4.35
2444 2569 0.398522 TCATAGTCAGCCCCCGTCAT 60.399 55.000 0.00 0.00 0.00 3.06
2445 2570 0.034059 CATAGTCAGCCCCCGTCATC 59.966 60.000 0.00 0.00 0.00 2.92
2446 2571 1.122019 ATAGTCAGCCCCCGTCATCC 61.122 60.000 0.00 0.00 0.00 3.51
2447 2572 4.530857 GTCAGCCCCCGTCATCCG 62.531 72.222 0.00 0.00 0.00 4.18
2452 2577 3.238497 CCCCCGTCATCCGCCATA 61.238 66.667 0.00 0.00 34.38 2.74
2453 2578 2.343758 CCCCGTCATCCGCCATAG 59.656 66.667 0.00 0.00 34.38 2.23
2454 2579 2.507854 CCCCGTCATCCGCCATAGT 61.508 63.158 0.00 0.00 34.38 2.12
2455 2580 1.006102 CCCGTCATCCGCCATAGTC 60.006 63.158 0.00 0.00 34.38 2.59
2456 2581 1.371758 CCGTCATCCGCCATAGTCG 60.372 63.158 0.00 0.00 34.38 4.18
2457 2582 2.016704 CGTCATCCGCCATAGTCGC 61.017 63.158 0.00 0.00 0.00 5.19
2458 2583 1.664965 GTCATCCGCCATAGTCGCC 60.665 63.158 0.00 0.00 0.00 5.54
2459 2584 2.734723 CATCCGCCATAGTCGCCG 60.735 66.667 0.00 0.00 0.00 6.46
2460 2585 2.910479 ATCCGCCATAGTCGCCGA 60.910 61.111 0.00 0.00 0.00 5.54
2461 2586 2.495409 ATCCGCCATAGTCGCCGAA 61.495 57.895 0.00 0.00 0.00 4.30
2462 2587 1.816863 ATCCGCCATAGTCGCCGAAT 61.817 55.000 0.00 0.00 0.00 3.34
2463 2588 2.022129 CCGCCATAGTCGCCGAATC 61.022 63.158 0.00 0.00 0.00 2.52
2464 2589 2.365068 CGCCATAGTCGCCGAATCG 61.365 63.158 0.00 0.00 0.00 3.34
2465 2590 1.007734 GCCATAGTCGCCGAATCGA 60.008 57.895 3.36 0.00 35.95 3.59
2466 2591 0.388649 GCCATAGTCGCCGAATCGAT 60.389 55.000 3.36 0.00 40.84 3.59
2467 2592 1.618861 CCATAGTCGCCGAATCGATC 58.381 55.000 3.36 0.00 40.84 3.69
2468 2593 1.618861 CATAGTCGCCGAATCGATCC 58.381 55.000 3.36 0.00 40.84 3.36
2469 2594 1.068541 CATAGTCGCCGAATCGATCCA 60.069 52.381 3.36 0.00 40.84 3.41
2470 2595 0.591659 TAGTCGCCGAATCGATCCAG 59.408 55.000 3.36 0.00 40.84 3.86
2471 2596 1.661821 GTCGCCGAATCGATCCAGG 60.662 63.158 3.36 3.81 40.84 4.45
2472 2597 1.826487 TCGCCGAATCGATCCAGGA 60.826 57.895 3.36 0.00 33.02 3.86
2473 2598 1.372251 CGCCGAATCGATCCAGGAG 60.372 63.158 3.36 9.63 0.00 3.69
2474 2599 1.666234 GCCGAATCGATCCAGGAGC 60.666 63.158 3.36 0.00 0.00 4.70
2475 2600 1.005630 CCGAATCGATCCAGGAGCC 60.006 63.158 3.36 0.00 0.00 4.70
2476 2601 1.742146 CGAATCGATCCAGGAGCCA 59.258 57.895 0.00 0.00 0.00 4.75
2477 2602 0.319383 CGAATCGATCCAGGAGCCAG 60.319 60.000 0.00 0.00 0.00 4.85
2478 2603 0.602372 GAATCGATCCAGGAGCCAGC 60.602 60.000 0.00 0.00 0.00 4.85
2479 2604 1.053264 AATCGATCCAGGAGCCAGCT 61.053 55.000 0.00 0.00 0.00 4.24
2480 2605 1.470996 ATCGATCCAGGAGCCAGCTC 61.471 60.000 11.28 11.28 42.04 4.09
2488 2613 2.125350 GAGCCAGCTCCTCCGTTG 60.125 66.667 8.51 0.00 37.11 4.10
2489 2614 4.400961 AGCCAGCTCCTCCGTTGC 62.401 66.667 0.00 0.00 0.00 4.17
2510 2635 0.612744 GGATGGATCCAGGAGCTAGC 59.387 60.000 21.33 6.62 46.38 3.42
2511 2636 1.643310 GATGGATCCAGGAGCTAGCT 58.357 55.000 19.45 19.45 0.00 3.32
2512 2637 2.558575 GGATGGATCCAGGAGCTAGCTA 60.559 54.545 19.38 0.97 46.38 3.32
2513 2638 2.300956 TGGATCCAGGAGCTAGCTAG 57.699 55.000 19.38 16.84 0.00 3.42
2522 2647 3.423179 GCTAGCTAGCTCGACCGT 58.577 61.111 33.71 0.00 45.62 4.83
2523 2648 1.009449 GCTAGCTAGCTCGACCGTG 60.009 63.158 33.71 5.19 45.62 4.94
2524 2649 1.649815 CTAGCTAGCTCGACCGTGG 59.350 63.158 23.26 0.00 0.00 4.94
2525 2650 2.395367 CTAGCTAGCTCGACCGTGGC 62.395 65.000 23.26 0.00 0.00 5.01
2536 2661 4.626081 CCGTGGCGGGATGGATCC 62.626 72.222 4.20 4.20 44.15 3.36
2544 2669 4.541213 GGATGGATCCGGGAGCTA 57.459 61.111 12.67 6.52 37.19 3.32
2545 2670 2.281830 GGATGGATCCGGGAGCTAG 58.718 63.158 12.67 0.00 37.19 3.42
2546 2671 1.594310 GATGGATCCGGGAGCTAGC 59.406 63.158 12.67 6.62 0.00 3.42
2547 2672 0.902516 GATGGATCCGGGAGCTAGCT 60.903 60.000 19.45 19.45 0.00 3.32
2548 2673 0.409876 ATGGATCCGGGAGCTAGCTA 59.590 55.000 19.38 0.97 0.00 3.32
2549 2674 0.251386 TGGATCCGGGAGCTAGCTAG 60.251 60.000 19.38 16.84 0.00 3.42
2559 2684 1.009449 GCTAGCTAGCTCGTCCACG 60.009 63.158 33.71 1.74 45.62 4.94
2560 2685 1.649815 CTAGCTAGCTCGTCCACGG 59.350 63.158 23.26 0.00 40.29 4.94
2561 2686 2.395367 CTAGCTAGCTCGTCCACGGC 62.395 65.000 23.26 2.12 40.29 5.68
2562 2687 4.874977 GCTAGCTCGTCCACGGCC 62.875 72.222 7.70 0.00 40.29 6.13
2563 2688 4.554363 CTAGCTCGTCCACGGCCG 62.554 72.222 26.86 26.86 40.29 6.13
2573 2698 4.776322 CACGGCCGGCTGGATTGA 62.776 66.667 37.32 0.00 37.49 2.57
2574 2699 4.473520 ACGGCCGGCTGGATTGAG 62.474 66.667 37.32 15.40 37.49 3.02
2576 2701 3.797353 GGCCGGCTGGATTGAGGA 61.797 66.667 28.56 0.00 37.49 3.71
2577 2702 2.203126 GCCGGCTGGATTGAGGAG 60.203 66.667 22.15 0.00 37.49 3.69
2578 2703 2.203126 CCGGCTGGATTGAGGAGC 60.203 66.667 5.28 0.00 37.49 4.70
2579 2704 2.739996 CCGGCTGGATTGAGGAGCT 61.740 63.158 5.28 0.00 37.49 4.09
2580 2705 1.222936 CGGCTGGATTGAGGAGCTT 59.777 57.895 0.00 0.00 33.03 3.74
2581 2706 1.094073 CGGCTGGATTGAGGAGCTTG 61.094 60.000 0.00 0.00 33.03 4.01
2582 2707 1.382692 GGCTGGATTGAGGAGCTTGC 61.383 60.000 0.00 0.00 33.03 4.01
2583 2708 0.394080 GCTGGATTGAGGAGCTTGCT 60.394 55.000 0.00 0.00 0.00 3.91
2584 2709 1.134280 GCTGGATTGAGGAGCTTGCTA 60.134 52.381 0.00 0.00 0.00 3.49
2585 2710 2.836262 CTGGATTGAGGAGCTTGCTAG 58.164 52.381 0.00 0.00 0.00 3.42
2601 2726 2.075338 GCTAGCTAGCTCATTCATGGC 58.925 52.381 33.71 5.40 45.62 4.40
2602 2727 2.697654 CTAGCTAGCTCATTCATGGCC 58.302 52.381 23.26 0.00 0.00 5.36
2603 2728 0.250209 AGCTAGCTCATTCATGGCCG 60.250 55.000 12.68 0.00 0.00 6.13
2604 2729 1.233285 GCTAGCTCATTCATGGCCGG 61.233 60.000 7.70 0.00 0.00 6.13
2605 2730 0.394192 CTAGCTCATTCATGGCCGGA 59.606 55.000 5.05 0.00 0.00 5.14
2606 2731 1.002888 CTAGCTCATTCATGGCCGGAT 59.997 52.381 5.05 0.00 0.00 4.18
2607 2732 0.536687 AGCTCATTCATGGCCGGATG 60.537 55.000 5.05 0.00 0.00 3.51
2608 2733 1.521450 GCTCATTCATGGCCGGATGG 61.521 60.000 5.05 0.00 38.77 3.51
2609 2734 0.109153 CTCATTCATGGCCGGATGGA 59.891 55.000 5.05 0.00 37.49 3.41
2610 2735 0.773014 TCATTCATGGCCGGATGGAT 59.227 50.000 5.05 0.00 37.49 3.41
2611 2736 1.171308 CATTCATGGCCGGATGGATC 58.829 55.000 5.05 0.00 37.49 3.36
2612 2737 0.038744 ATTCATGGCCGGATGGATCC 59.961 55.000 5.05 4.20 43.65 3.36
2621 2746 3.721793 GGATGGATCCAGGAGCTTG 57.278 57.895 21.33 0.00 46.38 4.01
2622 2747 0.536915 GGATGGATCCAGGAGCTTGC 60.537 60.000 21.33 3.36 46.38 4.01
2623 2748 0.473326 GATGGATCCAGGAGCTTGCT 59.527 55.000 21.33 0.00 0.00 3.91
2624 2749 1.696336 GATGGATCCAGGAGCTTGCTA 59.304 52.381 21.33 0.00 0.00 3.49
2625 2750 1.126488 TGGATCCAGGAGCTTGCTAG 58.874 55.000 11.44 0.00 0.00 3.42
2634 2759 3.389206 GCTTGCTAGCTCGTTCGG 58.611 61.111 17.23 0.00 44.27 4.30
2635 2760 1.446272 GCTTGCTAGCTCGTTCGGT 60.446 57.895 17.23 0.00 44.27 4.69
2636 2761 1.687494 GCTTGCTAGCTCGTTCGGTG 61.687 60.000 17.23 0.00 44.27 4.94
2637 2762 1.078759 CTTGCTAGCTCGTTCGGTGG 61.079 60.000 17.23 0.00 0.00 4.61
2638 2763 2.202756 GCTAGCTCGTTCGGTGGG 60.203 66.667 7.70 0.00 0.00 4.61
2639 2764 2.707849 GCTAGCTCGTTCGGTGGGA 61.708 63.158 7.70 0.00 0.00 4.37
2640 2765 1.139095 CTAGCTCGTTCGGTGGGAC 59.861 63.158 0.00 0.00 0.00 4.46
2641 2766 1.303888 TAGCTCGTTCGGTGGGACT 60.304 57.895 0.00 0.00 0.00 3.85
2642 2767 1.310933 TAGCTCGTTCGGTGGGACTC 61.311 60.000 0.00 0.00 0.00 3.36
2643 2768 2.572284 CTCGTTCGGTGGGACTCC 59.428 66.667 0.00 0.00 38.86 3.85
2644 2769 2.993264 TCGTTCGGTGGGACTCCC 60.993 66.667 7.25 7.25 45.71 4.30
2738 2863 2.351322 CGATCTCGTCGCTCGTGG 60.351 66.667 0.00 0.00 44.33 4.94
2739 2864 2.652496 GATCTCGTCGCTCGTGGC 60.652 66.667 0.00 0.00 40.80 5.01
2756 2881 4.271816 CGGATCTCGCCACTCCGG 62.272 72.222 0.00 0.00 46.32 5.14
2765 2890 2.203252 CCACTCCGGCCATCATGG 60.203 66.667 2.24 0.00 41.55 3.66
2766 2891 2.745308 CCACTCCGGCCATCATGGA 61.745 63.158 8.30 0.00 40.96 3.41
2768 2893 2.429058 CTCCGGCCATCATGGAGG 59.571 66.667 8.30 10.20 44.49 4.30
2769 2894 2.040988 TCCGGCCATCATGGAGGA 60.041 61.111 8.30 12.63 40.96 3.71
2770 2895 1.692395 TCCGGCCATCATGGAGGAA 60.692 57.895 16.51 3.62 40.94 3.36
2771 2896 1.526917 CCGGCCATCATGGAGGAAC 60.527 63.158 8.30 0.00 40.96 3.62
2772 2897 1.526917 CGGCCATCATGGAGGAACC 60.527 63.158 8.30 0.00 40.96 3.62
2773 2898 1.925888 GGCCATCATGGAGGAACCT 59.074 57.895 8.30 0.00 40.96 3.50
2774 2899 0.466922 GGCCATCATGGAGGAACCTG 60.467 60.000 8.30 0.00 40.96 4.00
2775 2900 0.466922 GCCATCATGGAGGAACCTGG 60.467 60.000 8.30 0.00 40.96 4.45
2776 2901 1.216064 CCATCATGGAGGAACCTGGA 58.784 55.000 0.00 0.00 40.96 3.86
2777 2902 1.133976 CCATCATGGAGGAACCTGGAC 60.134 57.143 0.00 0.00 40.96 4.02
2778 2903 1.842562 CATCATGGAGGAACCTGGACT 59.157 52.381 0.00 0.00 39.86 3.85
2779 2904 2.044793 TCATGGAGGAACCTGGACTT 57.955 50.000 0.00 0.00 39.86 3.01
2780 2905 1.909302 TCATGGAGGAACCTGGACTTC 59.091 52.381 0.00 0.00 39.86 3.01
2781 2906 0.905357 ATGGAGGAACCTGGACTTCG 59.095 55.000 0.00 0.00 39.86 3.79
2782 2907 1.192146 TGGAGGAACCTGGACTTCGG 61.192 60.000 0.00 0.00 39.86 4.30
2788 2913 4.760047 CCTGGACTTCGGGTGGCG 62.760 72.222 0.00 0.00 37.13 5.69
2789 2914 4.760047 CTGGACTTCGGGTGGCGG 62.760 72.222 0.00 0.00 0.00 6.13
2797 2922 4.708386 CGGGTGGCGGCCTTGTTA 62.708 66.667 21.46 0.00 0.00 2.41
2798 2923 2.750237 GGGTGGCGGCCTTGTTAG 60.750 66.667 21.46 0.00 0.00 2.34
2799 2924 2.750237 GGTGGCGGCCTTGTTAGG 60.750 66.667 21.46 0.00 45.02 2.69
2807 2932 4.635769 CCTTGTTAGGCATGGCGA 57.364 55.556 14.30 5.66 35.92 5.54
2808 2933 3.100545 CCTTGTTAGGCATGGCGAT 57.899 52.632 14.30 0.00 35.92 4.58
2809 2934 0.664761 CCTTGTTAGGCATGGCGATG 59.335 55.000 14.30 4.04 35.92 3.84
2830 2955 4.473520 CCCTCGGCTGGCGATGTT 62.474 66.667 26.53 0.00 0.00 2.71
2831 2956 2.892425 CCTCGGCTGGCGATGTTC 60.892 66.667 26.53 0.00 0.00 3.18
2832 2957 3.257561 CTCGGCTGGCGATGTTCG 61.258 66.667 26.53 10.95 43.89 3.95
2833 2958 3.989698 CTCGGCTGGCGATGTTCGT 62.990 63.158 26.53 0.00 42.81 3.85
2834 2959 3.853330 CGGCTGGCGATGTTCGTG 61.853 66.667 19.64 0.00 42.81 4.35
2835 2960 2.434185 GGCTGGCGATGTTCGTGA 60.434 61.111 0.00 0.00 42.81 4.35
2836 2961 2.456119 GGCTGGCGATGTTCGTGAG 61.456 63.158 0.00 0.00 42.81 3.51
2837 2962 2.456119 GCTGGCGATGTTCGTGAGG 61.456 63.158 0.00 0.00 42.81 3.86
2838 2963 1.811266 CTGGCGATGTTCGTGAGGG 60.811 63.158 0.00 0.00 42.81 4.30
2839 2964 2.511600 GGCGATGTTCGTGAGGGG 60.512 66.667 0.00 0.00 42.81 4.79
2840 2965 2.264794 GCGATGTTCGTGAGGGGT 59.735 61.111 0.00 0.00 42.81 4.95
2841 2966 2.100631 GCGATGTTCGTGAGGGGTG 61.101 63.158 0.00 0.00 42.81 4.61
2842 2967 1.447838 CGATGTTCGTGAGGGGTGG 60.448 63.158 0.00 0.00 34.72 4.61
2843 2968 1.884075 CGATGTTCGTGAGGGGTGGA 61.884 60.000 0.00 0.00 34.72 4.02
2844 2969 0.541863 GATGTTCGTGAGGGGTGGAT 59.458 55.000 0.00 0.00 0.00 3.41
2845 2970 0.253044 ATGTTCGTGAGGGGTGGATG 59.747 55.000 0.00 0.00 0.00 3.51
2846 2971 1.078426 GTTCGTGAGGGGTGGATGG 60.078 63.158 0.00 0.00 0.00 3.51
2847 2972 1.229368 TTCGTGAGGGGTGGATGGA 60.229 57.895 0.00 0.00 0.00 3.41
2848 2973 1.550130 TTCGTGAGGGGTGGATGGAC 61.550 60.000 0.00 0.00 0.00 4.02
2849 2974 2.584608 GTGAGGGGTGGATGGACG 59.415 66.667 0.00 0.00 0.00 4.79
2850 2975 1.987855 GTGAGGGGTGGATGGACGA 60.988 63.158 0.00 0.00 0.00 4.20
2851 2976 1.987855 TGAGGGGTGGATGGACGAC 60.988 63.158 0.00 0.00 0.00 4.34
2852 2977 1.987855 GAGGGGTGGATGGACGACA 60.988 63.158 0.00 0.00 0.00 4.35
2853 2978 1.306997 AGGGGTGGATGGACGACAT 60.307 57.895 0.00 0.00 44.18 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 106 2.148446 ATAAGCAATGCCAGGCAGAA 57.852 45.000 21.51 0.00 43.65 3.02
96 109 1.477700 GTGAATAAGCAATGCCAGGCA 59.522 47.619 18.99 18.99 44.86 4.75
99 112 4.177165 TGTTGTGAATAAGCAATGCCAG 57.823 40.909 0.00 0.00 0.00 4.85
107 120 4.952262 TCTCTGCATGTTGTGAATAAGC 57.048 40.909 0.00 0.00 0.00 3.09
108 121 9.447040 CATTAATCTCTGCATGTTGTGAATAAG 57.553 33.333 0.00 0.00 0.00 1.73
119 132 3.220110 ACAGCCCATTAATCTCTGCATG 58.780 45.455 0.00 0.00 0.00 4.06
123 136 3.565764 TGGACAGCCCATTAATCTCTG 57.434 47.619 6.59 6.59 40.82 3.35
142 155 3.577667 ACACCATCATTCGCAAAATGTG 58.422 40.909 8.26 6.57 0.00 3.21
151 164 5.808042 ATCAAGAGAAACACCATCATTCG 57.192 39.130 0.00 0.00 0.00 3.34
229 243 3.788227 TCAGCAAACACATAGGAACCT 57.212 42.857 0.00 0.00 0.00 3.50
230 244 3.821033 AGTTCAGCAAACACATAGGAACC 59.179 43.478 0.00 0.00 40.56 3.62
231 245 4.275936 ACAGTTCAGCAAACACATAGGAAC 59.724 41.667 5.00 0.00 40.56 3.62
260 275 6.347402 CCATTACTACTTGAACCACTGAAACG 60.347 42.308 0.00 0.00 0.00 3.60
314 332 1.272781 GCTGCATCAGTCTACACGTC 58.727 55.000 0.00 0.00 33.43 4.34
318 336 1.895131 TCACTGCTGCATCAGTCTACA 59.105 47.619 19.92 2.55 44.81 2.74
378 419 1.547372 AGCAATTGATGAAGCACACCC 59.453 47.619 10.34 0.00 0.00 4.61
380 421 1.990563 GCAGCAATTGATGAAGCACAC 59.009 47.619 27.03 3.73 32.25 3.82
381 422 1.401800 CGCAGCAATTGATGAAGCACA 60.402 47.619 27.03 0.00 32.25 4.57
401 451 1.063717 ACATGTTCACATCCCCCATCC 60.064 52.381 0.00 0.00 33.61 3.51
405 455 5.418676 CAATTTTACATGTTCACATCCCCC 58.581 41.667 2.30 0.00 33.61 5.40
406 456 4.869861 GCAATTTTACATGTTCACATCCCC 59.130 41.667 2.30 0.00 33.61 4.81
449 500 1.564207 TCAGCAATGAAGCGATCTCG 58.436 50.000 0.00 0.00 40.15 4.04
481 532 8.723942 ATGAAGTGATAGATAAAACGAAAGCT 57.276 30.769 0.00 0.00 0.00 3.74
667 727 0.868406 GCTGGTTCAACTTGGACTCG 59.132 55.000 0.07 0.00 0.00 4.18
713 773 4.077184 TGGATCGACCCACGTGGC 62.077 66.667 29.75 15.52 43.13 5.01
714 774 2.184322 CTGGATCGACCCACGTGG 59.816 66.667 28.26 28.26 43.13 4.94
715 775 2.184322 CCTGGATCGACCCACGTG 59.816 66.667 9.08 9.08 43.13 4.49
716 776 3.771160 GCCTGGATCGACCCACGT 61.771 66.667 0.00 0.00 43.13 4.49
717 777 3.770040 TGCCTGGATCGACCCACG 61.770 66.667 0.00 0.00 44.09 4.94
718 778 2.125106 GTGCCTGGATCGACCCAC 60.125 66.667 0.00 0.00 38.00 4.61
719 779 2.284625 AGTGCCTGGATCGACCCA 60.285 61.111 0.00 0.00 38.00 4.51
791 851 2.029666 CCGGATGCCTCGATGGAC 59.970 66.667 0.00 0.00 38.35 4.02
798 858 4.899239 CACGCCTCCGGATGCCTC 62.899 72.222 23.81 0.00 39.22 4.70
821 881 2.029964 GCGATTCCCCGGCGAATA 59.970 61.111 14.26 0.00 32.56 1.75
876 948 2.676342 GCACGAATACTACCACCAAAGG 59.324 50.000 0.00 0.00 0.00 3.11
886 958 2.057137 ACCGGGTAGCACGAATACTA 57.943 50.000 6.32 0.00 0.00 1.82
903 977 6.870439 ACAGAACGAAATACCTTTGTACTACC 59.130 38.462 0.00 0.00 30.83 3.18
904 978 7.880059 ACAGAACGAAATACCTTTGTACTAC 57.120 36.000 0.00 0.00 30.83 2.73
905 979 8.362639 AGAACAGAACGAAATACCTTTGTACTA 58.637 33.333 0.00 0.00 30.83 1.82
906 980 7.170998 CAGAACAGAACGAAATACCTTTGTACT 59.829 37.037 0.00 0.00 30.83 2.73
977 1053 2.200899 GCTCGATCCTCTCTTTGCTTC 58.799 52.381 0.00 0.00 0.00 3.86
978 1054 1.134551 GGCTCGATCCTCTCTTTGCTT 60.135 52.381 0.00 0.00 0.00 3.91
979 1055 0.463620 GGCTCGATCCTCTCTTTGCT 59.536 55.000 0.00 0.00 0.00 3.91
983 1059 1.415659 CCATTGGCTCGATCCTCTCTT 59.584 52.381 6.88 0.00 0.00 2.85
997 1073 1.224592 CCTCCTCCCGAACCATTGG 59.775 63.158 0.00 0.00 0.00 3.16
1208 1296 5.041287 CCGAGTTAGAATCGTTATTGCTCA 58.959 41.667 0.00 0.00 38.50 4.26
1209 1297 4.085004 GCCGAGTTAGAATCGTTATTGCTC 60.085 45.833 0.00 0.00 38.50 4.26
1235 1323 2.048127 GCTCAGAGAAACGGCCGT 60.048 61.111 28.70 28.70 0.00 5.68
1248 1336 1.446099 GTGTTCTGATCCGCGCTCA 60.446 57.895 5.56 4.87 0.00 4.26
1258 1346 1.000607 CCGTTCTTCTCCGTGTTCTGA 60.001 52.381 0.00 0.00 0.00 3.27
1411 1499 4.176851 GACGACGACGAGGAGGGC 62.177 72.222 15.32 0.00 42.66 5.19
1412 1500 3.862402 CGACGACGACGAGGAGGG 61.862 72.222 15.32 0.00 42.66 4.30
1413 1501 4.517703 GCGACGACGACGAGGAGG 62.518 72.222 22.94 0.00 42.66 4.30
1414 1502 4.517703 GGCGACGACGACGAGGAG 62.518 72.222 22.94 3.27 42.66 3.69
1872 1963 1.134610 AGTTTGTTTCGTCCGGACACT 60.135 47.619 32.80 22.88 0.00 3.55
1881 1977 1.861971 GTCTCCCGAGTTTGTTTCGT 58.138 50.000 0.00 0.00 36.37 3.85
1883 1979 2.144482 TCGTCTCCCGAGTTTGTTTC 57.856 50.000 0.00 0.00 41.60 2.78
1957 2058 0.674895 CACTACCCACTTCCTGCTGC 60.675 60.000 0.00 0.00 0.00 5.25
1996 2097 1.740296 ATGCGCGGTAAGTCCACAC 60.740 57.895 8.83 0.00 35.57 3.82
2033 2135 9.082313 AGATGAAATTCCACAGAAACAAGTAAT 57.918 29.630 0.00 0.00 35.09 1.89
2077 2202 7.556275 GGGGCATAGAAATGGATATTCGAATAA 59.444 37.037 21.05 6.24 33.38 1.40
2081 2206 4.622933 CGGGGCATAGAAATGGATATTCGA 60.623 45.833 0.00 0.00 33.38 3.71
2091 2216 0.179018 GTGAGCCGGGGCATAGAAAT 60.179 55.000 12.97 0.00 44.88 2.17
2110 2235 2.033448 TTAACCGGGTGCAGCAGG 59.967 61.111 29.87 29.87 0.00 4.85
2111 2236 1.003839 TCTTAACCGGGTGCAGCAG 60.004 57.895 19.06 14.10 0.00 4.24
2113 2238 0.321298 TTCTCTTAACCGGGTGCAGC 60.321 55.000 0.00 7.55 0.00 5.25
2114 2239 2.178912 TTTCTCTTAACCGGGTGCAG 57.821 50.000 0.00 0.00 0.00 4.41
2115 2240 2.642154 TTTTCTCTTAACCGGGTGCA 57.358 45.000 0.00 0.00 0.00 4.57
2116 2241 3.504520 TGAATTTTCTCTTAACCGGGTGC 59.495 43.478 0.00 0.00 0.00 5.01
2120 2245 7.995463 TTGTTTTGAATTTTCTCTTAACCGG 57.005 32.000 0.00 0.00 0.00 5.28
2173 2298 8.614346 AGCGATTTAAACAGTACACAGTAAAAA 58.386 29.630 0.00 0.00 0.00 1.94
2174 2299 8.145316 AGCGATTTAAACAGTACACAGTAAAA 57.855 30.769 0.00 0.00 0.00 1.52
2179 2304 7.744715 CCTTAAAGCGATTTAAACAGTACACAG 59.255 37.037 18.23 4.08 0.00 3.66
2180 2305 7.227116 ACCTTAAAGCGATTTAAACAGTACACA 59.773 33.333 18.23 0.00 0.00 3.72
2183 2308 9.911980 GATACCTTAAAGCGATTTAAACAGTAC 57.088 33.333 18.23 11.09 0.00 2.73
2186 2311 9.834628 TTTGATACCTTAAAGCGATTTAAACAG 57.165 29.630 18.23 12.58 0.00 3.16
2204 2329 4.092968 CACGTCTTGGCTTAGTTTGATACC 59.907 45.833 0.00 0.00 0.00 2.73
2244 2369 4.123506 GGGTTTGCTAGAGATGCTCTAAC 58.876 47.826 5.75 2.48 41.74 2.34
2245 2370 3.134804 GGGGTTTGCTAGAGATGCTCTAA 59.865 47.826 5.75 0.00 41.74 2.10
2246 2371 2.700897 GGGGTTTGCTAGAGATGCTCTA 59.299 50.000 0.00 4.30 41.50 2.43
2247 2372 1.488393 GGGGTTTGCTAGAGATGCTCT 59.512 52.381 0.00 2.22 43.83 4.09
2248 2373 1.488393 AGGGGTTTGCTAGAGATGCTC 59.512 52.381 0.00 0.00 0.00 4.26
2249 2374 1.589414 AGGGGTTTGCTAGAGATGCT 58.411 50.000 0.00 0.00 0.00 3.79
2250 2375 2.426842 AAGGGGTTTGCTAGAGATGC 57.573 50.000 0.00 0.00 0.00 3.91
2251 2376 4.640647 GGTTTAAGGGGTTTGCTAGAGATG 59.359 45.833 0.00 0.00 0.00 2.90
2252 2377 4.625564 CGGTTTAAGGGGTTTGCTAGAGAT 60.626 45.833 0.00 0.00 0.00 2.75
2253 2378 3.307199 CGGTTTAAGGGGTTTGCTAGAGA 60.307 47.826 0.00 0.00 0.00 3.10
2254 2379 3.007635 CGGTTTAAGGGGTTTGCTAGAG 58.992 50.000 0.00 0.00 0.00 2.43
2255 2380 2.876892 GCGGTTTAAGGGGTTTGCTAGA 60.877 50.000 0.00 0.00 0.00 2.43
2256 2381 1.471287 GCGGTTTAAGGGGTTTGCTAG 59.529 52.381 0.00 0.00 0.00 3.42
2257 2382 1.536940 GCGGTTTAAGGGGTTTGCTA 58.463 50.000 0.00 0.00 0.00 3.49
2258 2383 1.520600 CGCGGTTTAAGGGGTTTGCT 61.521 55.000 0.00 0.00 0.00 3.91
2259 2384 1.081041 CGCGGTTTAAGGGGTTTGC 60.081 57.895 0.00 0.00 0.00 3.68
2260 2385 0.890090 TCCGCGGTTTAAGGGGTTTG 60.890 55.000 27.15 0.00 41.75 2.93
2261 2386 0.178995 TTCCGCGGTTTAAGGGGTTT 60.179 50.000 27.15 0.00 41.75 3.27
2262 2387 0.890542 GTTCCGCGGTTTAAGGGGTT 60.891 55.000 27.15 0.00 41.75 4.11
2263 2388 1.302752 GTTCCGCGGTTTAAGGGGT 60.303 57.895 27.15 0.00 41.75 4.95
2264 2389 1.002990 AGTTCCGCGGTTTAAGGGG 60.003 57.895 27.15 0.00 42.33 4.79
2265 2390 0.320946 TCAGTTCCGCGGTTTAAGGG 60.321 55.000 27.15 9.62 0.00 3.95
2266 2391 1.515081 TTCAGTTCCGCGGTTTAAGG 58.485 50.000 27.15 11.26 0.00 2.69
2267 2392 3.294102 GTTTTCAGTTCCGCGGTTTAAG 58.706 45.455 27.15 12.72 0.00 1.85
2268 2393 2.286301 CGTTTTCAGTTCCGCGGTTTAA 60.286 45.455 27.15 9.73 0.00 1.52
2269 2394 1.261089 CGTTTTCAGTTCCGCGGTTTA 59.739 47.619 27.15 9.28 0.00 2.01
2270 2395 0.028374 CGTTTTCAGTTCCGCGGTTT 59.972 50.000 27.15 9.12 0.00 3.27
2271 2396 1.644913 CGTTTTCAGTTCCGCGGTT 59.355 52.632 27.15 9.53 0.00 4.44
2272 2397 2.888998 GCGTTTTCAGTTCCGCGGT 61.889 57.895 27.15 1.97 36.53 5.68
2273 2398 2.127383 GCGTTTTCAGTTCCGCGG 60.127 61.111 22.12 22.12 36.53 6.46
2275 2400 1.559149 TACCGCGTTTTCAGTTCCGC 61.559 55.000 4.92 0.00 42.53 5.54
2276 2401 1.073177 ATACCGCGTTTTCAGTTCCG 58.927 50.000 4.92 0.00 0.00 4.30
2277 2402 2.481185 TGAATACCGCGTTTTCAGTTCC 59.519 45.455 4.92 0.00 30.94 3.62
2278 2403 3.732943 CTGAATACCGCGTTTTCAGTTC 58.267 45.455 23.73 12.04 42.38 3.01
2279 2404 3.806316 CTGAATACCGCGTTTTCAGTT 57.194 42.857 23.73 4.85 42.38 3.16
2282 2407 3.850374 GCAAACTGAATACCGCGTTTTCA 60.850 43.478 4.92 10.15 33.80 2.69
2283 2408 2.655001 GCAAACTGAATACCGCGTTTTC 59.345 45.455 4.92 5.67 0.00 2.29
2284 2409 2.657184 GCAAACTGAATACCGCGTTTT 58.343 42.857 4.92 0.00 0.00 2.43
2285 2410 1.399215 CGCAAACTGAATACCGCGTTT 60.399 47.619 4.92 0.00 38.03 3.60
2286 2411 0.165079 CGCAAACTGAATACCGCGTT 59.835 50.000 4.92 0.00 38.03 4.84
2287 2412 1.632046 CCGCAAACTGAATACCGCGT 61.632 55.000 4.92 0.00 41.04 6.01
2288 2413 1.060308 CCGCAAACTGAATACCGCG 59.940 57.895 0.00 0.00 42.21 6.46
2289 2414 0.800012 TTCCGCAAACTGAATACCGC 59.200 50.000 0.00 0.00 0.00 5.68
2290 2415 3.231160 GTTTTCCGCAAACTGAATACCG 58.769 45.455 2.12 0.00 41.58 4.02
2291 2416 3.978855 GTGTTTTCCGCAAACTGAATACC 59.021 43.478 9.17 0.00 44.68 2.73
2292 2417 4.602995 TGTGTTTTCCGCAAACTGAATAC 58.397 39.130 9.17 0.00 44.68 1.89
2293 2418 4.902443 TGTGTTTTCCGCAAACTGAATA 57.098 36.364 9.17 0.00 44.68 1.75
2294 2419 3.791973 TGTGTTTTCCGCAAACTGAAT 57.208 38.095 9.17 0.00 44.68 2.57
2295 2420 3.791973 ATGTGTTTTCCGCAAACTGAA 57.208 38.095 9.17 0.00 44.68 3.02
2296 2421 3.791973 AATGTGTTTTCCGCAAACTGA 57.208 38.095 9.17 0.00 44.68 3.41
2297 2422 4.856115 AAAATGTGTTTTCCGCAAACTG 57.144 36.364 9.17 0.00 44.68 3.16
2298 2423 5.522097 CCTTAAAATGTGTTTTCCGCAAACT 59.478 36.000 9.17 0.00 44.68 2.66
2299 2424 5.277106 CCCTTAAAATGTGTTTTCCGCAAAC 60.277 40.000 2.34 2.34 44.64 2.93
2300 2425 4.811557 CCCTTAAAATGTGTTTTCCGCAAA 59.188 37.500 0.00 0.00 38.44 3.68
2301 2426 4.141914 ACCCTTAAAATGTGTTTTCCGCAA 60.142 37.500 0.00 0.00 38.44 4.85
2302 2427 3.385111 ACCCTTAAAATGTGTTTTCCGCA 59.615 39.130 0.00 0.00 38.44 5.69
2303 2428 3.985008 ACCCTTAAAATGTGTTTTCCGC 58.015 40.909 0.00 0.00 38.44 5.54
2304 2429 4.223659 CGACCCTTAAAATGTGTTTTCCG 58.776 43.478 0.00 0.00 38.44 4.30
2305 2430 4.038282 ACCGACCCTTAAAATGTGTTTTCC 59.962 41.667 0.00 0.00 38.44 3.13
2306 2431 5.190992 ACCGACCCTTAAAATGTGTTTTC 57.809 39.130 0.00 0.00 38.44 2.29
2307 2432 5.601583 AACCGACCCTTAAAATGTGTTTT 57.398 34.783 0.00 0.00 40.48 2.43
2308 2433 5.127356 TCAAACCGACCCTTAAAATGTGTTT 59.873 36.000 0.00 0.00 0.00 2.83
2309 2434 4.645588 TCAAACCGACCCTTAAAATGTGTT 59.354 37.500 0.00 0.00 0.00 3.32
2310 2435 4.208746 TCAAACCGACCCTTAAAATGTGT 58.791 39.130 0.00 0.00 0.00 3.72
2311 2436 4.794169 CTCAAACCGACCCTTAAAATGTG 58.206 43.478 0.00 0.00 0.00 3.21
2312 2437 3.254903 GCTCAAACCGACCCTTAAAATGT 59.745 43.478 0.00 0.00 0.00 2.71
2313 2438 3.506067 AGCTCAAACCGACCCTTAAAATG 59.494 43.478 0.00 0.00 0.00 2.32
2314 2439 3.506067 CAGCTCAAACCGACCCTTAAAAT 59.494 43.478 0.00 0.00 0.00 1.82
2315 2440 2.882137 CAGCTCAAACCGACCCTTAAAA 59.118 45.455 0.00 0.00 0.00 1.52
2316 2441 2.500229 CAGCTCAAACCGACCCTTAAA 58.500 47.619 0.00 0.00 0.00 1.52
2317 2442 1.880646 GCAGCTCAAACCGACCCTTAA 60.881 52.381 0.00 0.00 0.00 1.85
2318 2443 0.321298 GCAGCTCAAACCGACCCTTA 60.321 55.000 0.00 0.00 0.00 2.69
2319 2444 1.600916 GCAGCTCAAACCGACCCTT 60.601 57.895 0.00 0.00 0.00 3.95
2320 2445 2.032681 GCAGCTCAAACCGACCCT 59.967 61.111 0.00 0.00 0.00 4.34
2321 2446 3.423154 CGCAGCTCAAACCGACCC 61.423 66.667 0.00 0.00 0.00 4.46
2322 2447 3.423154 CCGCAGCTCAAACCGACC 61.423 66.667 0.00 0.00 0.00 4.79
2323 2448 4.090057 GCCGCAGCTCAAACCGAC 62.090 66.667 0.00 0.00 35.50 4.79
2327 2452 3.353836 TTCGGCCGCAGCTCAAAC 61.354 61.111 23.51 0.00 39.73 2.93
2328 2453 3.353836 GTTCGGCCGCAGCTCAAA 61.354 61.111 23.51 4.32 39.73 2.69
2329 2454 4.617520 TGTTCGGCCGCAGCTCAA 62.618 61.111 23.51 5.21 39.73 3.02
2331 2456 4.742201 TCTGTTCGGCCGCAGCTC 62.742 66.667 23.51 9.01 39.73 4.09
2337 2462 2.175035 TTAAGGGGTCTGTTCGGCCG 62.175 60.000 22.12 22.12 0.00 6.13
2338 2463 0.037160 TTTAAGGGGTCTGTTCGGCC 59.963 55.000 0.00 0.00 0.00 6.13
2339 2464 1.162698 GTTTAAGGGGTCTGTTCGGC 58.837 55.000 0.00 0.00 0.00 5.54
2340 2465 2.853235 AGTTTAAGGGGTCTGTTCGG 57.147 50.000 0.00 0.00 0.00 4.30
2341 2466 3.512724 TCCTAGTTTAAGGGGTCTGTTCG 59.487 47.826 0.00 0.00 37.24 3.95
2342 2467 4.531339 AGTCCTAGTTTAAGGGGTCTGTTC 59.469 45.833 0.00 0.00 37.24 3.18
2343 2468 4.500452 AGTCCTAGTTTAAGGGGTCTGTT 58.500 43.478 0.00 0.00 37.24 3.16
2344 2469 4.143406 AGTCCTAGTTTAAGGGGTCTGT 57.857 45.455 0.00 0.00 37.24 3.41
2345 2470 7.909485 TTATAGTCCTAGTTTAAGGGGTCTG 57.091 40.000 0.00 0.00 37.24 3.51
2346 2471 8.766476 GTTTTATAGTCCTAGTTTAAGGGGTCT 58.234 37.037 0.00 0.00 37.24 3.85
2347 2472 7.989741 GGTTTTATAGTCCTAGTTTAAGGGGTC 59.010 40.741 0.00 0.00 37.24 4.46
2348 2473 7.365028 CGGTTTTATAGTCCTAGTTTAAGGGGT 60.365 40.741 0.00 0.00 37.24 4.95
2349 2474 6.988580 CGGTTTTATAGTCCTAGTTTAAGGGG 59.011 42.308 0.00 0.00 37.24 4.79
2350 2475 7.785033 TCGGTTTTATAGTCCTAGTTTAAGGG 58.215 38.462 0.00 0.00 37.24 3.95
2351 2476 9.828039 ATTCGGTTTTATAGTCCTAGTTTAAGG 57.172 33.333 0.00 0.00 38.06 2.69
2371 2496 9.877178 GAGGAAGAATATACATGAATATTCGGT 57.123 33.333 10.80 12.98 46.53 4.69
2372 2497 9.875691 TGAGGAAGAATATACATGAATATTCGG 57.124 33.333 10.80 7.99 46.53 4.30
2376 2501 9.862371 GACGTGAGGAAGAATATACATGAATAT 57.138 33.333 0.00 0.00 0.00 1.28
2377 2502 9.078990 AGACGTGAGGAAGAATATACATGAATA 57.921 33.333 0.00 0.00 0.00 1.75
2378 2503 7.957002 AGACGTGAGGAAGAATATACATGAAT 58.043 34.615 0.00 0.00 0.00 2.57
2379 2504 7.348080 AGACGTGAGGAAGAATATACATGAA 57.652 36.000 0.00 0.00 0.00 2.57
2380 2505 6.961360 AGACGTGAGGAAGAATATACATGA 57.039 37.500 0.00 0.00 0.00 3.07
2381 2506 7.429633 AGAAGACGTGAGGAAGAATATACATG 58.570 38.462 0.00 0.00 0.00 3.21
2382 2507 7.589958 AGAAGACGTGAGGAAGAATATACAT 57.410 36.000 0.00 0.00 0.00 2.29
2383 2508 7.339721 AGAAGAAGACGTGAGGAAGAATATACA 59.660 37.037 0.00 0.00 0.00 2.29
2384 2509 7.708998 AGAAGAAGACGTGAGGAAGAATATAC 58.291 38.462 0.00 0.00 0.00 1.47
2385 2510 7.883391 AGAAGAAGACGTGAGGAAGAATATA 57.117 36.000 0.00 0.00 0.00 0.86
2386 2511 6.783708 AGAAGAAGACGTGAGGAAGAATAT 57.216 37.500 0.00 0.00 0.00 1.28
2387 2512 6.350277 GGAAGAAGAAGACGTGAGGAAGAATA 60.350 42.308 0.00 0.00 0.00 1.75
2388 2513 5.474825 GAAGAAGAAGACGTGAGGAAGAAT 58.525 41.667 0.00 0.00 0.00 2.40
2389 2514 4.262079 GGAAGAAGAAGACGTGAGGAAGAA 60.262 45.833 0.00 0.00 0.00 2.52
2390 2515 3.256136 GGAAGAAGAAGACGTGAGGAAGA 59.744 47.826 0.00 0.00 0.00 2.87
2391 2516 3.257127 AGGAAGAAGAAGACGTGAGGAAG 59.743 47.826 0.00 0.00 0.00 3.46
2392 2517 3.231818 AGGAAGAAGAAGACGTGAGGAA 58.768 45.455 0.00 0.00 0.00 3.36
2393 2518 2.820787 GAGGAAGAAGAAGACGTGAGGA 59.179 50.000 0.00 0.00 0.00 3.71
2394 2519 2.823154 AGAGGAAGAAGAAGACGTGAGG 59.177 50.000 0.00 0.00 0.00 3.86
2395 2520 3.504134 TGAGAGGAAGAAGAAGACGTGAG 59.496 47.826 0.00 0.00 0.00 3.51
2396 2521 3.487372 TGAGAGGAAGAAGAAGACGTGA 58.513 45.455 0.00 0.00 0.00 4.35
2397 2522 3.924918 TGAGAGGAAGAAGAAGACGTG 57.075 47.619 0.00 0.00 0.00 4.49
2398 2523 3.445805 GGATGAGAGGAAGAAGAAGACGT 59.554 47.826 0.00 0.00 0.00 4.34
2399 2524 3.488384 CGGATGAGAGGAAGAAGAAGACG 60.488 52.174 0.00 0.00 0.00 4.18
2400 2525 3.445805 ACGGATGAGAGGAAGAAGAAGAC 59.554 47.826 0.00 0.00 0.00 3.01
2401 2526 3.445450 CACGGATGAGAGGAAGAAGAAGA 59.555 47.826 0.00 0.00 0.00 2.87
2402 2527 3.194542 ACACGGATGAGAGGAAGAAGAAG 59.805 47.826 0.00 0.00 0.00 2.85
2403 2528 3.165875 ACACGGATGAGAGGAAGAAGAA 58.834 45.455 0.00 0.00 0.00 2.52
2404 2529 2.808919 ACACGGATGAGAGGAAGAAGA 58.191 47.619 0.00 0.00 0.00 2.87
2405 2530 3.056536 TGAACACGGATGAGAGGAAGAAG 60.057 47.826 0.00 0.00 0.00 2.85
2406 2531 2.897326 TGAACACGGATGAGAGGAAGAA 59.103 45.455 0.00 0.00 0.00 2.52
2407 2532 2.525368 TGAACACGGATGAGAGGAAGA 58.475 47.619 0.00 0.00 0.00 2.87
2408 2533 3.533606 ATGAACACGGATGAGAGGAAG 57.466 47.619 0.00 0.00 0.00 3.46
2409 2534 4.023980 ACTATGAACACGGATGAGAGGAA 58.976 43.478 0.00 0.00 0.00 3.36
2410 2535 3.632333 ACTATGAACACGGATGAGAGGA 58.368 45.455 0.00 0.00 0.00 3.71
2411 2536 3.381590 TGACTATGAACACGGATGAGAGG 59.618 47.826 0.00 0.00 0.00 3.69
2412 2537 4.605968 CTGACTATGAACACGGATGAGAG 58.394 47.826 0.00 0.00 0.00 3.20
2413 2538 3.181486 GCTGACTATGAACACGGATGAGA 60.181 47.826 0.00 0.00 0.00 3.27
2414 2539 3.119291 GCTGACTATGAACACGGATGAG 58.881 50.000 0.00 0.00 0.00 2.90
2415 2540 2.159099 GGCTGACTATGAACACGGATGA 60.159 50.000 0.00 0.00 0.00 2.92
2416 2541 2.205074 GGCTGACTATGAACACGGATG 58.795 52.381 0.00 0.00 0.00 3.51
2417 2542 1.139058 GGGCTGACTATGAACACGGAT 59.861 52.381 0.00 0.00 0.00 4.18
2418 2543 0.535335 GGGCTGACTATGAACACGGA 59.465 55.000 0.00 0.00 0.00 4.69
2419 2544 0.462047 GGGGCTGACTATGAACACGG 60.462 60.000 0.00 0.00 0.00 4.94
2420 2545 0.462047 GGGGGCTGACTATGAACACG 60.462 60.000 0.00 0.00 0.00 4.49
2421 2546 0.462047 CGGGGGCTGACTATGAACAC 60.462 60.000 0.00 0.00 0.00 3.32
2422 2547 0.907704 ACGGGGGCTGACTATGAACA 60.908 55.000 0.00 0.00 0.00 3.18
2423 2548 0.179081 GACGGGGGCTGACTATGAAC 60.179 60.000 0.00 0.00 0.00 3.18
2424 2549 0.616395 TGACGGGGGCTGACTATGAA 60.616 55.000 0.00 0.00 0.00 2.57
2425 2550 0.398522 ATGACGGGGGCTGACTATGA 60.399 55.000 0.00 0.00 0.00 2.15
2426 2551 0.034059 GATGACGGGGGCTGACTATG 59.966 60.000 0.00 0.00 0.00 2.23
2427 2552 1.122019 GGATGACGGGGGCTGACTAT 61.122 60.000 0.00 0.00 0.00 2.12
2428 2553 1.760875 GGATGACGGGGGCTGACTA 60.761 63.158 0.00 0.00 0.00 2.59
2429 2554 3.083997 GGATGACGGGGGCTGACT 61.084 66.667 0.00 0.00 0.00 3.41
2430 2555 4.530857 CGGATGACGGGGGCTGAC 62.531 72.222 0.00 0.00 39.42 3.51
2435 2560 3.238497 TATGGCGGATGACGGGGG 61.238 66.667 0.00 0.00 44.51 5.40
2436 2561 2.343758 CTATGGCGGATGACGGGG 59.656 66.667 0.00 0.00 44.51 5.73
2437 2562 1.006102 GACTATGGCGGATGACGGG 60.006 63.158 0.00 0.00 44.51 5.28
2438 2563 1.371758 CGACTATGGCGGATGACGG 60.372 63.158 0.00 0.00 44.51 4.79
2440 2565 1.664965 GGCGACTATGGCGGATGAC 60.665 63.158 0.00 0.00 0.00 3.06
2441 2566 2.734591 GGCGACTATGGCGGATGA 59.265 61.111 0.00 0.00 0.00 2.92
2447 2572 0.388649 ATCGATTCGGCGACTATGGC 60.389 55.000 10.16 0.00 43.79 4.40
2448 2573 1.618861 GATCGATTCGGCGACTATGG 58.381 55.000 10.16 2.76 43.79 2.74
2449 2574 1.068541 TGGATCGATTCGGCGACTATG 60.069 52.381 10.16 0.26 43.79 2.23
2450 2575 1.200252 CTGGATCGATTCGGCGACTAT 59.800 52.381 10.16 0.00 43.79 2.12
2451 2576 0.591659 CTGGATCGATTCGGCGACTA 59.408 55.000 10.16 0.00 43.79 2.59
2452 2577 1.360551 CTGGATCGATTCGGCGACT 59.639 57.895 10.16 3.40 43.79 4.18
2453 2578 1.661821 CCTGGATCGATTCGGCGAC 60.662 63.158 10.16 0.00 43.79 5.19
2454 2579 1.796190 CTCCTGGATCGATTCGGCGA 61.796 60.000 4.99 4.99 45.22 5.54
2455 2580 1.372251 CTCCTGGATCGATTCGGCG 60.372 63.158 7.04 0.00 0.00 6.46
2456 2581 1.666234 GCTCCTGGATCGATTCGGC 60.666 63.158 7.04 1.34 0.00 5.54
2457 2582 1.005630 GGCTCCTGGATCGATTCGG 60.006 63.158 5.44 5.44 0.00 4.30
2458 2583 0.319383 CTGGCTCCTGGATCGATTCG 60.319 60.000 0.00 0.00 0.00 3.34
2459 2584 0.602372 GCTGGCTCCTGGATCGATTC 60.602 60.000 0.00 0.00 0.00 2.52
2460 2585 1.053264 AGCTGGCTCCTGGATCGATT 61.053 55.000 0.00 0.00 0.00 3.34
2461 2586 1.459158 AGCTGGCTCCTGGATCGAT 60.459 57.895 0.00 0.00 0.00 3.59
2462 2587 2.042537 AGCTGGCTCCTGGATCGA 60.043 61.111 0.00 0.00 0.00 3.59
2463 2588 2.420890 GAGCTGGCTCCTGGATCG 59.579 66.667 11.14 0.00 37.11 3.69
2471 2596 2.125350 CAACGGAGGAGCTGGCTC 60.125 66.667 13.56 13.56 42.04 4.70
2472 2597 4.400961 GCAACGGAGGAGCTGGCT 62.401 66.667 0.00 0.00 0.00 4.75
2492 2617 1.643310 AGCTAGCTCCTGGATCCATC 58.357 55.000 16.63 5.16 0.00 3.51
2493 2618 2.818921 CTAGCTAGCTCCTGGATCCAT 58.181 52.381 23.26 1.87 0.00 3.41
2494 2619 1.825242 GCTAGCTAGCTCCTGGATCCA 60.825 57.143 33.71 15.27 45.62 3.41
2495 2620 0.894835 GCTAGCTAGCTCCTGGATCC 59.105 60.000 33.71 4.20 45.62 3.36
2506 2631 1.649815 CCACGGTCGAGCTAGCTAG 59.350 63.158 19.38 18.55 0.00 3.42
2507 2632 2.478890 GCCACGGTCGAGCTAGCTA 61.479 63.158 19.38 0.00 0.00 3.32
2508 2633 3.827898 GCCACGGTCGAGCTAGCT 61.828 66.667 19.45 19.45 0.00 3.32
2510 2635 4.554363 CCGCCACGGTCGAGCTAG 62.554 72.222 13.48 4.66 42.73 3.42
2514 2639 4.873129 CATCCCGCCACGGTCGAG 62.873 72.222 5.17 0.00 46.80 4.04
2517 2642 3.809374 GATCCATCCCGCCACGGTC 62.809 68.421 5.17 0.00 46.80 4.79
2518 2643 3.861797 GATCCATCCCGCCACGGT 61.862 66.667 5.17 0.00 46.80 4.83
2520 2645 4.969196 CGGATCCATCCCGCCACG 62.969 72.222 13.41 0.00 44.24 4.94
2521 2646 4.626081 CCGGATCCATCCCGCCAC 62.626 72.222 13.41 0.00 45.24 5.01
2524 2649 4.008933 CTCCCGGATCCATCCCGC 62.009 72.222 13.41 0.00 45.24 6.13
2525 2650 4.008933 GCTCCCGGATCCATCCCG 62.009 72.222 13.41 0.00 44.24 5.14
2526 2651 1.229209 TAGCTCCCGGATCCATCCC 60.229 63.158 13.41 0.00 44.24 3.85
2527 2652 1.893919 GCTAGCTCCCGGATCCATCC 61.894 65.000 13.41 0.00 43.65 3.51
2528 2653 0.902516 AGCTAGCTCCCGGATCCATC 60.903 60.000 12.68 0.00 0.00 3.51
2529 2654 0.409876 TAGCTAGCTCCCGGATCCAT 59.590 55.000 23.26 0.00 0.00 3.41
2530 2655 0.251386 CTAGCTAGCTCCCGGATCCA 60.251 60.000 23.26 0.00 0.00 3.41
2531 2656 1.600511 GCTAGCTAGCTCCCGGATCC 61.601 65.000 33.71 0.00 45.62 3.36
2532 2657 1.887301 GCTAGCTAGCTCCCGGATC 59.113 63.158 33.71 6.02 45.62 3.36
2533 2658 4.105388 GCTAGCTAGCTCCCGGAT 57.895 61.111 33.71 0.00 45.62 4.18
2541 2666 2.395367 CCGTGGACGAGCTAGCTAGC 62.395 65.000 33.96 33.96 43.02 3.42
2542 2667 1.649815 CCGTGGACGAGCTAGCTAG 59.350 63.158 19.38 20.70 43.02 3.42
2543 2668 2.478890 GCCGTGGACGAGCTAGCTA 61.479 63.158 19.38 0.00 43.02 3.32
2544 2669 3.827898 GCCGTGGACGAGCTAGCT 61.828 66.667 19.45 19.45 43.02 3.32
2545 2670 4.874977 GGCCGTGGACGAGCTAGC 62.875 72.222 6.62 6.62 43.02 3.42
2556 2681 4.776322 TCAATCCAGCCGGCCGTG 62.776 66.667 26.15 16.54 0.00 4.94
2557 2682 4.473520 CTCAATCCAGCCGGCCGT 62.474 66.667 26.15 1.18 0.00 5.68
2559 2684 3.764160 CTCCTCAATCCAGCCGGCC 62.764 68.421 26.15 5.07 0.00 6.13
2560 2685 2.203126 CTCCTCAATCCAGCCGGC 60.203 66.667 21.89 21.89 0.00 6.13
2561 2686 2.203126 GCTCCTCAATCCAGCCGG 60.203 66.667 0.00 0.00 0.00 6.13
2562 2687 1.094073 CAAGCTCCTCAATCCAGCCG 61.094 60.000 0.00 0.00 33.28 5.52
2563 2688 1.382692 GCAAGCTCCTCAATCCAGCC 61.383 60.000 0.00 0.00 33.28 4.85
2564 2689 0.394080 AGCAAGCTCCTCAATCCAGC 60.394 55.000 0.00 0.00 0.00 4.85
2565 2690 2.836262 CTAGCAAGCTCCTCAATCCAG 58.164 52.381 0.00 0.00 0.00 3.86
2566 2691 1.134280 GCTAGCAAGCTCCTCAATCCA 60.134 52.381 10.63 0.00 45.85 3.41
2567 2692 1.592064 GCTAGCAAGCTCCTCAATCC 58.408 55.000 10.63 0.00 45.85 3.01
2582 2707 2.697654 GGCCATGAATGAGCTAGCTAG 58.302 52.381 19.38 16.84 0.00 3.42
2583 2708 1.001293 CGGCCATGAATGAGCTAGCTA 59.999 52.381 19.38 6.79 0.00 3.32
2584 2709 0.250209 CGGCCATGAATGAGCTAGCT 60.250 55.000 19.45 19.45 0.00 3.32
2585 2710 1.233285 CCGGCCATGAATGAGCTAGC 61.233 60.000 6.62 6.62 0.00 3.42
2586 2711 0.394192 TCCGGCCATGAATGAGCTAG 59.606 55.000 2.24 0.00 0.00 3.42
2587 2712 1.059098 ATCCGGCCATGAATGAGCTA 58.941 50.000 2.24 0.00 0.00 3.32
2588 2713 0.536687 CATCCGGCCATGAATGAGCT 60.537 55.000 2.24 0.00 0.00 4.09
2589 2714 1.521450 CCATCCGGCCATGAATGAGC 61.521 60.000 2.24 0.00 0.00 4.26
2590 2715 0.109153 TCCATCCGGCCATGAATGAG 59.891 55.000 2.24 0.00 0.00 2.90
2591 2716 0.773014 ATCCATCCGGCCATGAATGA 59.227 50.000 2.24 0.08 0.00 2.57
2592 2717 1.171308 GATCCATCCGGCCATGAATG 58.829 55.000 2.24 0.00 0.00 2.67
2593 2718 0.038744 GGATCCATCCGGCCATGAAT 59.961 55.000 6.95 0.00 37.19 2.57
2594 2719 1.455849 GGATCCATCCGGCCATGAA 59.544 57.895 6.95 0.00 37.19 2.57
2595 2720 3.160585 GGATCCATCCGGCCATGA 58.839 61.111 6.95 0.00 37.19 3.07
2604 2729 0.473326 AGCAAGCTCCTGGATCCATC 59.527 55.000 16.63 5.16 0.00 3.51
2605 2730 1.698532 CTAGCAAGCTCCTGGATCCAT 59.301 52.381 16.63 0.00 0.00 3.41
2606 2731 1.126488 CTAGCAAGCTCCTGGATCCA 58.874 55.000 15.27 15.27 0.00 3.41
2607 2732 0.250252 GCTAGCAAGCTCCTGGATCC 60.250 60.000 10.63 4.20 45.85 3.36
2608 2733 3.304041 GCTAGCAAGCTCCTGGATC 57.696 57.895 10.63 0.00 45.85 3.36
2618 2743 1.078759 CCACCGAACGAGCTAGCAAG 61.079 60.000 18.83 12.62 0.00 4.01
2619 2744 1.080093 CCACCGAACGAGCTAGCAA 60.080 57.895 18.83 0.00 0.00 3.91
2620 2745 2.571757 CCACCGAACGAGCTAGCA 59.428 61.111 18.83 0.00 0.00 3.49
2621 2746 2.202756 CCCACCGAACGAGCTAGC 60.203 66.667 6.62 6.62 0.00 3.42
2622 2747 1.139095 GTCCCACCGAACGAGCTAG 59.861 63.158 0.00 0.00 0.00 3.42
2623 2748 1.303888 AGTCCCACCGAACGAGCTA 60.304 57.895 0.00 0.00 0.00 3.32
2624 2749 2.600769 AGTCCCACCGAACGAGCT 60.601 61.111 0.00 0.00 0.00 4.09
2625 2750 2.126031 GAGTCCCACCGAACGAGC 60.126 66.667 0.00 0.00 0.00 5.03
2626 2751 2.572284 GGAGTCCCACCGAACGAG 59.428 66.667 0.00 0.00 0.00 4.18
2627 2752 2.993264 GGGAGTCCCACCGAACGA 60.993 66.667 24.35 0.00 44.65 3.85
2722 2847 2.652496 GCCACGAGCGACGAGATC 60.652 66.667 12.62 0.00 45.77 2.75
2748 2873 2.203252 CCATGATGGCCGGAGTGG 60.203 66.667 5.05 0.00 42.50 4.00
2749 2874 1.227764 CTCCATGATGGCCGGAGTG 60.228 63.158 5.05 3.65 41.26 3.51
2750 2875 2.446848 CCTCCATGATGGCCGGAGT 61.447 63.158 18.91 0.00 44.12 3.85
2751 2876 1.699054 TTCCTCCATGATGGCCGGAG 61.699 60.000 17.67 14.90 45.02 4.63
2752 2877 1.692395 TTCCTCCATGATGGCCGGA 60.692 57.895 15.44 15.44 37.47 5.14
2753 2878 1.526917 GTTCCTCCATGATGGCCGG 60.527 63.158 6.59 9.80 37.47 6.13
2754 2879 1.526917 GGTTCCTCCATGATGGCCG 60.527 63.158 6.59 0.00 37.47 6.13
2755 2880 0.466922 CAGGTTCCTCCATGATGGCC 60.467 60.000 6.59 1.44 37.47 5.36
2756 2881 0.466922 CCAGGTTCCTCCATGATGGC 60.467 60.000 6.59 0.00 37.47 4.40
2757 2882 1.133976 GTCCAGGTTCCTCCATGATGG 60.134 57.143 4.74 4.74 39.43 3.51
2758 2883 1.842562 AGTCCAGGTTCCTCCATGATG 59.157 52.381 0.00 0.00 39.02 3.07
2759 2884 2.277008 AGTCCAGGTTCCTCCATGAT 57.723 50.000 0.00 0.00 39.02 2.45
2760 2885 1.909302 GAAGTCCAGGTTCCTCCATGA 59.091 52.381 0.00 0.00 39.02 3.07
2761 2886 1.406069 CGAAGTCCAGGTTCCTCCATG 60.406 57.143 0.00 0.00 39.02 3.66
2762 2887 0.905357 CGAAGTCCAGGTTCCTCCAT 59.095 55.000 0.00 0.00 39.02 3.41
2763 2888 1.192146 CCGAAGTCCAGGTTCCTCCA 61.192 60.000 0.00 0.00 39.02 3.86
2764 2889 1.597461 CCGAAGTCCAGGTTCCTCC 59.403 63.158 0.00 0.00 0.00 4.30
2765 2890 1.192803 ACCCGAAGTCCAGGTTCCTC 61.193 60.000 0.00 0.00 0.00 3.71
2766 2891 1.152096 ACCCGAAGTCCAGGTTCCT 60.152 57.895 0.00 0.00 0.00 3.36
2767 2892 1.003718 CACCCGAAGTCCAGGTTCC 60.004 63.158 0.00 0.00 0.00 3.62
2768 2893 1.003718 CCACCCGAAGTCCAGGTTC 60.004 63.158 0.00 0.00 0.00 3.62
2769 2894 3.157680 CCACCCGAAGTCCAGGTT 58.842 61.111 0.00 0.00 0.00 3.50
2770 2895 3.637273 GCCACCCGAAGTCCAGGT 61.637 66.667 0.00 0.00 0.00 4.00
2771 2896 4.760047 CGCCACCCGAAGTCCAGG 62.760 72.222 0.00 0.00 40.02 4.45
2772 2897 4.760047 CCGCCACCCGAAGTCCAG 62.760 72.222 0.00 0.00 40.02 3.86
2780 2905 4.708386 TAACAAGGCCGCCACCCG 62.708 66.667 13.15 0.00 0.00 5.28
2781 2906 2.750237 CTAACAAGGCCGCCACCC 60.750 66.667 13.15 0.00 0.00 4.61
2782 2907 2.750237 CCTAACAAGGCCGCCACC 60.750 66.667 13.15 0.00 0.00 4.61
2790 2915 0.664761 CATCGCCATGCCTAACAAGG 59.335 55.000 0.00 0.00 40.26 3.61
2817 2942 3.853330 CACGAACATCGCCAGCCG 61.853 66.667 0.00 0.00 45.12 5.52
2818 2943 2.434185 TCACGAACATCGCCAGCC 60.434 61.111 0.00 0.00 45.12 4.85
2819 2944 2.456119 CCTCACGAACATCGCCAGC 61.456 63.158 0.00 0.00 45.12 4.85
2820 2945 1.811266 CCCTCACGAACATCGCCAG 60.811 63.158 0.00 0.00 45.12 4.85
2821 2946 2.264480 CCCTCACGAACATCGCCA 59.736 61.111 0.00 0.00 45.12 5.69
2822 2947 2.511600 CCCCTCACGAACATCGCC 60.512 66.667 0.00 0.00 45.12 5.54
2823 2948 2.100631 CACCCCTCACGAACATCGC 61.101 63.158 0.00 0.00 45.12 4.58
2824 2949 1.447838 CCACCCCTCACGAACATCG 60.448 63.158 0.00 0.00 46.93 3.84
2825 2950 0.541863 ATCCACCCCTCACGAACATC 59.458 55.000 0.00 0.00 0.00 3.06
2826 2951 0.253044 CATCCACCCCTCACGAACAT 59.747 55.000 0.00 0.00 0.00 2.71
2827 2952 1.676968 CATCCACCCCTCACGAACA 59.323 57.895 0.00 0.00 0.00 3.18
2828 2953 1.078426 CCATCCACCCCTCACGAAC 60.078 63.158 0.00 0.00 0.00 3.95
2829 2954 1.229368 TCCATCCACCCCTCACGAA 60.229 57.895 0.00 0.00 0.00 3.85
2830 2955 1.987855 GTCCATCCACCCCTCACGA 60.988 63.158 0.00 0.00 0.00 4.35
2831 2956 2.584608 GTCCATCCACCCCTCACG 59.415 66.667 0.00 0.00 0.00 4.35
2832 2957 1.987855 TCGTCCATCCACCCCTCAC 60.988 63.158 0.00 0.00 0.00 3.51
2833 2958 1.987855 GTCGTCCATCCACCCCTCA 60.988 63.158 0.00 0.00 0.00 3.86
2834 2959 1.338136 ATGTCGTCCATCCACCCCTC 61.338 60.000 0.00 0.00 0.00 4.30
2835 2960 1.306997 ATGTCGTCCATCCACCCCT 60.307 57.895 0.00 0.00 0.00 4.79
2836 2961 1.146263 GATGTCGTCCATCCACCCC 59.854 63.158 6.58 0.00 43.59 4.95
2837 2962 4.857251 GATGTCGTCCATCCACCC 57.143 61.111 6.58 0.00 43.59 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.